Multiple sequence alignment - TraesCS7A01G427200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G427200 chr7A 100.000 4077 0 0 1 4077 620414836 620410760 0.000000e+00 7529.0
1 TraesCS7A01G427200 chr7A 92.135 178 13 1 242 418 223265928 223266105 2.430000e-62 250.0
2 TraesCS7A01G427200 chr7A 76.507 481 81 28 2383 2853 620487468 620487926 2.450000e-57 233.0
3 TraesCS7A01G427200 chr7A 76.082 485 82 28 2383 2853 620370835 620370371 5.300000e-54 222.0
4 TraesCS7A01G427200 chr7A 85.955 178 23 2 2383 2559 619576284 619576108 5.380000e-44 189.0
5 TraesCS7A01G427200 chr7B 89.228 1541 106 31 420 1924 581397666 581396150 0.000000e+00 1871.0
6 TraesCS7A01G427200 chr7B 90.538 1300 59 35 1911 3197 581396128 581394880 0.000000e+00 1661.0
7 TraesCS7A01G427200 chr7B 93.009 801 48 5 3282 4077 3719604 3718807 0.000000e+00 1162.0
8 TraesCS7A01G427200 chr7B 86.034 179 21 4 2383 2559 580885296 580885120 5.380000e-44 189.0
9 TraesCS7A01G427200 chr7B 97.368 38 1 0 71 108 581397701 581397664 9.460000e-07 65.8
10 TraesCS7A01G427200 chr7D 88.143 1341 74 39 1876 3199 538895781 538894509 0.000000e+00 1517.0
11 TraesCS7A01G427200 chr7D 86.354 1407 84 35 420 1759 538897210 538895845 0.000000e+00 1435.0
12 TraesCS7A01G427200 chr7D 76.458 480 83 25 2383 2853 538818445 538817987 2.450000e-57 233.0
13 TraesCS7A01G427200 chr7D 89.247 186 17 3 238 421 605183516 605183700 3.170000e-56 230.0
14 TraesCS7A01G427200 chr7D 74.948 479 90 26 2383 2846 538140456 538139993 4.160000e-45 193.0
15 TraesCS7A01G427200 chr7D 87.117 163 19 2 2383 2544 538662455 538662616 2.500000e-42 183.0
16 TraesCS7A01G427200 chr7D 91.200 125 11 0 123 247 401823639 401823763 1.950000e-38 171.0
17 TraesCS7A01G427200 chr7D 92.857 84 6 0 25 108 538897291 538897208 5.530000e-24 122.0
18 TraesCS7A01G427200 chr5A 94.724 796 37 2 3287 4077 289909624 289910419 0.000000e+00 1232.0
19 TraesCS7A01G427200 chr5A 91.160 181 15 1 239 418 632197269 632197449 1.130000e-60 244.0
20 TraesCS7A01G427200 chr3D 94.051 353 19 1 3282 3632 422039037 422039389 6.000000e-148 534.0
21 TraesCS7A01G427200 chr3D 88.398 181 20 1 239 418 604567564 604567744 2.470000e-52 217.0
22 TraesCS7A01G427200 chr3D 91.339 127 11 0 121 247 604567319 604567445 1.510000e-39 174.0
23 TraesCS7A01G427200 chr3D 89.683 126 12 1 123 247 75614561 75614686 4.220000e-35 159.0
24 TraesCS7A01G427200 chr2B 83.257 436 40 27 919 1350 391481296 391481702 1.790000e-98 370.0
25 TraesCS7A01G427200 chr2B 82.380 437 41 24 919 1350 633601736 633602141 8.390000e-92 348.0
26 TraesCS7A01G427200 chr2B 82.432 148 26 0 2680 2827 649479838 649479691 3.310000e-26 130.0
27 TraesCS7A01G427200 chr5B 82.895 380 33 22 919 1293 120539016 120538664 3.060000e-81 313.0
28 TraesCS7A01G427200 chr5B 80.813 443 44 24 919 1350 246493253 246492841 3.960000e-80 309.0
29 TraesCS7A01G427200 chr5B 91.057 123 11 0 125 247 273281975 273282097 2.520000e-37 167.0
30 TraesCS7A01G427200 chr5B 90.400 125 12 0 123 247 42253654 42253530 9.070000e-37 165.0
31 TraesCS7A01G427200 chr2D 93.258 178 10 2 242 418 542136571 542136395 1.120000e-65 261.0
32 TraesCS7A01G427200 chr2D 82.000 150 23 3 2680 2827 543846883 543846736 1.540000e-24 124.0
33 TraesCS7A01G427200 chr2D 80.272 147 25 3 2683 2827 544170818 544170674 1.550000e-19 108.0
34 TraesCS7A01G427200 chr4A 90.449 178 15 2 242 418 552509579 552509403 2.450000e-57 233.0
35 TraesCS7A01G427200 chr5D 89.503 181 16 3 239 418 493521650 493521828 4.100000e-55 226.0
36 TraesCS7A01G427200 chr5D 90.551 127 12 0 121 247 38719608 38719482 7.010000e-38 169.0
37 TraesCS7A01G427200 chr6B 89.205 176 18 1 242 416 538947050 538946875 6.860000e-53 219.0
38 TraesCS7A01G427200 chr6B 88.976 127 13 1 121 247 696512829 696512954 5.460000e-34 156.0
39 TraesCS7A01G427200 chr2A 88.827 179 18 2 242 418 752561296 752561118 6.860000e-53 219.0
40 TraesCS7A01G427200 chr2A 74.236 458 88 24 2384 2827 686777750 686777309 9.070000e-37 165.0
41 TraesCS7A01G427200 chr2A 82.000 150 23 3 2680 2827 686703989 686703842 1.540000e-24 124.0
42 TraesCS7A01G427200 chr4D 90.000 130 13 0 118 247 85826659 85826788 7.010000e-38 169.0
43 TraesCS7A01G427200 chr3A 87.786 131 16 0 115 245 62257763 62257893 1.960000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G427200 chr7A 620410760 620414836 4076 True 7529.000000 7529 100.000 1 4077 1 chr7A.!!$R3 4076
1 TraesCS7A01G427200 chr7B 581394880 581397701 2821 True 1199.266667 1871 92.378 71 3197 3 chr7B.!!$R3 3126
2 TraesCS7A01G427200 chr7B 3718807 3719604 797 True 1162.000000 1162 93.009 3282 4077 1 chr7B.!!$R1 795
3 TraesCS7A01G427200 chr7D 538894509 538897291 2782 True 1024.666667 1517 89.118 25 3199 3 chr7D.!!$R3 3174
4 TraesCS7A01G427200 chr5A 289909624 289910419 795 False 1232.000000 1232 94.724 3287 4077 1 chr5A.!!$F1 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.320421 TGTGCTACCGAGTTTGGAGC 60.320 55.0 0.0 0.0 34.65 4.70 F
1542 1602 0.326595 TCCCCTGCATTTGTCGCTAA 59.673 50.0 0.0 0.0 0.00 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1582 1650 0.108041 GTTAACCTCCCAATCGGCGA 60.108 55.0 13.87 13.87 0.0 5.54 R
3219 3346 0.249911 ACGAGGAGAAACAAAGCGCT 60.250 50.0 2.64 2.64 0.0 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 113 4.124351 GTCGATGGGCGTCGTCCA 62.124 66.667 22.86 22.86 43.40 4.02
113 114 3.822192 TCGATGGGCGTCGTCCAG 61.822 66.667 24.75 11.75 42.12 3.86
123 124 4.689549 TCGTCCAGCCCCGAGGAA 62.690 66.667 0.00 0.00 35.29 3.36
124 125 3.702048 CGTCCAGCCCCGAGGAAA 61.702 66.667 0.00 0.00 35.29 3.13
125 126 2.998949 GTCCAGCCCCGAGGAAAT 59.001 61.111 0.00 0.00 35.29 2.17
126 127 1.682451 CGTCCAGCCCCGAGGAAATA 61.682 60.000 0.00 0.00 35.29 1.40
127 128 0.765510 GTCCAGCCCCGAGGAAATAT 59.234 55.000 0.00 0.00 35.29 1.28
128 129 1.056660 TCCAGCCCCGAGGAAATATC 58.943 55.000 0.00 0.00 33.47 1.63
129 130 1.059913 CCAGCCCCGAGGAAATATCT 58.940 55.000 0.00 0.00 33.47 1.98
130 131 1.271054 CCAGCCCCGAGGAAATATCTG 60.271 57.143 0.00 0.00 33.47 2.90
131 132 1.059913 AGCCCCGAGGAAATATCTGG 58.940 55.000 0.00 0.00 33.47 3.86
132 133 0.765510 GCCCCGAGGAAATATCTGGT 59.234 55.000 0.00 0.00 33.47 4.00
133 134 1.975680 GCCCCGAGGAAATATCTGGTA 59.024 52.381 0.00 0.00 33.47 3.25
134 135 2.289506 GCCCCGAGGAAATATCTGGTAC 60.290 54.545 0.00 0.00 33.47 3.34
135 136 3.240302 CCCCGAGGAAATATCTGGTACT 58.760 50.000 0.00 0.00 33.47 2.73
136 137 3.258622 CCCCGAGGAAATATCTGGTACTC 59.741 52.174 0.00 0.00 33.47 2.59
137 138 4.153411 CCCGAGGAAATATCTGGTACTCT 58.847 47.826 0.00 0.00 0.00 3.24
138 139 4.589374 CCCGAGGAAATATCTGGTACTCTT 59.411 45.833 0.00 0.00 0.00 2.85
139 140 5.773680 CCCGAGGAAATATCTGGTACTCTTA 59.226 44.000 0.00 0.00 0.00 2.10
140 141 6.437793 CCCGAGGAAATATCTGGTACTCTTAT 59.562 42.308 0.00 0.00 0.00 1.73
141 142 7.363094 CCCGAGGAAATATCTGGTACTCTTATC 60.363 44.444 0.00 0.00 0.00 1.75
142 143 7.363094 CCGAGGAAATATCTGGTACTCTTATCC 60.363 44.444 0.00 0.00 0.00 2.59
143 144 7.363094 CGAGGAAATATCTGGTACTCTTATCCC 60.363 44.444 0.00 0.00 0.00 3.85
144 145 7.549141 AGGAAATATCTGGTACTCTTATCCCT 58.451 38.462 0.00 0.00 0.00 4.20
145 146 8.689054 AGGAAATATCTGGTACTCTTATCCCTA 58.311 37.037 0.00 0.00 0.00 3.53
146 147 8.973182 GGAAATATCTGGTACTCTTATCCCTAG 58.027 40.741 0.00 0.00 0.00 3.02
147 148 8.903059 AAATATCTGGTACTCTTATCCCTAGG 57.097 38.462 0.06 0.06 0.00 3.02
148 149 4.743705 TCTGGTACTCTTATCCCTAGGG 57.256 50.000 23.22 23.22 0.00 3.53
149 150 4.060192 TCTGGTACTCTTATCCCTAGGGT 58.940 47.826 27.58 16.78 36.47 4.34
150 151 4.140994 TCTGGTACTCTTATCCCTAGGGTG 60.141 50.000 27.58 15.51 36.47 4.61
151 152 2.898612 GGTACTCTTATCCCTAGGGTGC 59.101 54.545 27.58 9.68 36.47 5.01
152 153 3.438225 GGTACTCTTATCCCTAGGGTGCT 60.438 52.174 27.58 15.42 36.47 4.40
153 154 2.965562 ACTCTTATCCCTAGGGTGCTC 58.034 52.381 27.58 0.00 36.47 4.26
154 155 2.252714 CTCTTATCCCTAGGGTGCTCC 58.747 57.143 27.58 0.00 36.47 4.70
162 163 3.832175 AGGGTGCTCCTGATGCTT 58.168 55.556 4.53 0.00 46.07 3.91
163 164 1.606531 AGGGTGCTCCTGATGCTTC 59.393 57.895 4.53 0.00 46.07 3.86
164 165 1.203441 AGGGTGCTCCTGATGCTTCA 61.203 55.000 4.53 1.92 46.07 3.02
165 166 0.322816 GGGTGCTCCTGATGCTTCAA 60.323 55.000 4.53 0.00 0.00 2.69
166 167 1.538047 GGTGCTCCTGATGCTTCAAA 58.462 50.000 3.65 0.00 0.00 2.69
167 168 1.888512 GGTGCTCCTGATGCTTCAAAA 59.111 47.619 3.65 0.00 0.00 2.44
168 169 2.352127 GGTGCTCCTGATGCTTCAAAAC 60.352 50.000 3.65 0.00 0.00 2.43
169 170 2.555757 GTGCTCCTGATGCTTCAAAACT 59.444 45.455 3.65 0.00 0.00 2.66
170 171 3.005155 GTGCTCCTGATGCTTCAAAACTT 59.995 43.478 3.65 0.00 0.00 2.66
171 172 4.216257 GTGCTCCTGATGCTTCAAAACTTA 59.784 41.667 3.65 0.00 0.00 2.24
172 173 4.456911 TGCTCCTGATGCTTCAAAACTTAG 59.543 41.667 3.65 0.00 0.00 2.18
173 174 4.457257 GCTCCTGATGCTTCAAAACTTAGT 59.543 41.667 3.65 0.00 0.00 2.24
174 175 5.643777 GCTCCTGATGCTTCAAAACTTAGTA 59.356 40.000 3.65 0.00 0.00 1.82
175 176 6.183360 GCTCCTGATGCTTCAAAACTTAGTAG 60.183 42.308 3.65 0.00 0.00 2.57
176 177 5.643777 TCCTGATGCTTCAAAACTTAGTAGC 59.356 40.000 3.65 0.00 0.00 3.58
177 178 5.412594 CCTGATGCTTCAAAACTTAGTAGCA 59.587 40.000 8.89 8.89 42.14 3.49
178 179 6.241207 TGATGCTTCAAAACTTAGTAGCAC 57.759 37.500 8.67 4.90 40.92 4.40
179 180 5.762711 TGATGCTTCAAAACTTAGTAGCACA 59.237 36.000 8.67 6.96 40.92 4.57
180 181 6.430925 TGATGCTTCAAAACTTAGTAGCACAT 59.569 34.615 8.67 0.00 40.92 3.21
181 182 6.633500 TGCTTCAAAACTTAGTAGCACATT 57.367 33.333 2.99 0.00 34.05 2.71
182 183 7.038154 TGCTTCAAAACTTAGTAGCACATTT 57.962 32.000 2.99 0.00 34.05 2.32
183 184 7.488322 TGCTTCAAAACTTAGTAGCACATTTT 58.512 30.769 2.99 0.00 34.05 1.82
184 185 7.978975 TGCTTCAAAACTTAGTAGCACATTTTT 59.021 29.630 2.99 0.00 34.05 1.94
185 186 9.458374 GCTTCAAAACTTAGTAGCACATTTTTA 57.542 29.630 0.00 0.00 0.00 1.52
230 231 5.787953 AAATCCATCACATTGACACAACA 57.212 34.783 0.00 0.00 0.00 3.33
231 232 5.988310 AATCCATCACATTGACACAACAT 57.012 34.783 0.00 0.00 0.00 2.71
232 233 5.571784 ATCCATCACATTGACACAACATC 57.428 39.130 0.00 0.00 0.00 3.06
233 234 4.396522 TCCATCACATTGACACAACATCA 58.603 39.130 0.00 0.00 0.00 3.07
234 235 4.826183 TCCATCACATTGACACAACATCAA 59.174 37.500 0.00 0.00 40.25 2.57
235 236 5.301298 TCCATCACATTGACACAACATCAAA 59.699 36.000 0.00 0.00 39.43 2.69
236 237 5.631929 CCATCACATTGACACAACATCAAAG 59.368 40.000 0.00 0.00 39.43 2.77
237 238 5.833406 TCACATTGACACAACATCAAAGT 57.167 34.783 0.00 0.00 39.43 2.66
238 239 6.934048 TCACATTGACACAACATCAAAGTA 57.066 33.333 0.00 0.00 39.43 2.24
239 240 7.509141 TCACATTGACACAACATCAAAGTAT 57.491 32.000 0.00 0.00 39.43 2.12
240 241 7.361894 TCACATTGACACAACATCAAAGTATG 58.638 34.615 0.00 0.00 39.43 2.39
241 242 7.013178 TCACATTGACACAACATCAAAGTATGT 59.987 33.333 0.00 0.00 41.87 2.29
242 243 7.648908 CACATTGACACAACATCAAAGTATGTT 59.351 33.333 0.00 0.00 42.01 2.71
243 244 7.648908 ACATTGACACAACATCAAAGTATGTTG 59.351 33.333 21.86 21.86 42.01 3.33
244 245 6.691754 TGACACAACATCAAAGTATGTTGT 57.308 33.333 22.92 22.92 42.01 3.32
245 246 6.724263 TGACACAACATCAAAGTATGTTGTC 58.276 36.000 24.81 18.08 42.01 3.18
246 247 6.317391 TGACACAACATCAAAGTATGTTGTCA 59.683 34.615 24.81 19.85 42.01 3.58
247 248 7.013178 TGACACAACATCAAAGTATGTTGTCAT 59.987 33.333 24.81 18.36 42.01 3.06
248 249 7.715657 ACACAACATCAAAGTATGTTGTCATT 58.284 30.769 24.81 13.85 42.01 2.57
249 250 8.196771 ACACAACATCAAAGTATGTTGTCATTT 58.803 29.630 24.81 12.01 42.01 2.32
250 251 9.033481 CACAACATCAAAGTATGTTGTCATTTT 57.967 29.630 24.81 7.21 42.01 1.82
251 252 9.598517 ACAACATCAAAGTATGTTGTCATTTTT 57.401 25.926 22.92 5.57 42.01 1.94
260 261 9.653287 AAGTATGTTGTCATTTTTCTATCTCGA 57.347 29.630 0.00 0.00 35.70 4.04
261 262 9.307121 AGTATGTTGTCATTTTTCTATCTCGAG 57.693 33.333 5.93 5.93 35.70 4.04
262 263 6.408858 TGTTGTCATTTTTCTATCTCGAGC 57.591 37.500 7.81 0.00 0.00 5.03
263 264 5.931724 TGTTGTCATTTTTCTATCTCGAGCA 59.068 36.000 7.81 0.00 0.00 4.26
264 265 6.426633 TGTTGTCATTTTTCTATCTCGAGCAA 59.573 34.615 7.81 0.00 0.00 3.91
265 266 7.119699 TGTTGTCATTTTTCTATCTCGAGCAAT 59.880 33.333 7.81 0.00 0.00 3.56
266 267 7.008440 TGTCATTTTTCTATCTCGAGCAATG 57.992 36.000 7.81 7.21 0.00 2.82
267 268 6.595326 TGTCATTTTTCTATCTCGAGCAATGT 59.405 34.615 7.81 0.00 0.00 2.71
268 269 7.119699 TGTCATTTTTCTATCTCGAGCAATGTT 59.880 33.333 7.81 0.00 0.00 2.71
269 270 7.965107 GTCATTTTTCTATCTCGAGCAATGTTT 59.035 33.333 7.81 0.00 0.00 2.83
270 271 8.177663 TCATTTTTCTATCTCGAGCAATGTTTC 58.822 33.333 7.81 0.00 0.00 2.78
271 272 7.433708 TTTTTCTATCTCGAGCAATGTTTCA 57.566 32.000 7.81 0.00 0.00 2.69
272 273 7.433708 TTTTCTATCTCGAGCAATGTTTCAA 57.566 32.000 7.81 0.00 0.00 2.69
273 274 7.433708 TTTCTATCTCGAGCAATGTTTCAAA 57.566 32.000 7.81 0.00 0.00 2.69
274 275 7.615582 TTCTATCTCGAGCAATGTTTCAAAT 57.384 32.000 7.81 0.00 0.00 2.32
275 276 7.615582 TCTATCTCGAGCAATGTTTCAAATT 57.384 32.000 7.81 0.00 0.00 1.82
276 277 8.044060 TCTATCTCGAGCAATGTTTCAAATTT 57.956 30.769 7.81 0.00 0.00 1.82
277 278 8.514594 TCTATCTCGAGCAATGTTTCAAATTTT 58.485 29.630 7.81 0.00 0.00 1.82
278 279 6.752335 TCTCGAGCAATGTTTCAAATTTTG 57.248 33.333 7.81 2.59 0.00 2.44
279 280 6.502652 TCTCGAGCAATGTTTCAAATTTTGA 58.497 32.000 7.81 7.74 38.04 2.69
280 281 7.147312 TCTCGAGCAATGTTTCAAATTTTGAT 58.853 30.769 12.39 0.00 39.84 2.57
281 282 7.652909 TCTCGAGCAATGTTTCAAATTTTGATT 59.347 29.630 12.39 1.78 39.84 2.57
282 283 8.140677 TCGAGCAATGTTTCAAATTTTGATTT 57.859 26.923 12.39 2.89 39.84 2.17
283 284 9.254133 TCGAGCAATGTTTCAAATTTTGATTTA 57.746 25.926 12.39 3.08 39.84 1.40
284 285 9.861138 CGAGCAATGTTTCAAATTTTGATTTAA 57.139 25.926 12.39 2.12 39.84 1.52
317 318 7.977789 AACAACATACATTGATGTAGTGTCA 57.022 32.000 9.45 0.00 45.46 3.58
318 319 7.977789 ACAACATACATTGATGTAGTGTCAA 57.022 32.000 9.45 0.00 45.46 3.18
319 320 8.565896 ACAACATACATTGATGTAGTGTCAAT 57.434 30.769 9.45 0.00 45.46 2.57
325 326 5.808042 ATTGATGTAGTGTCAATGTGCTC 57.192 39.130 0.95 0.00 42.87 4.26
326 327 3.253230 TGATGTAGTGTCAATGTGCTCG 58.747 45.455 0.00 0.00 0.00 5.03
327 328 3.056891 TGATGTAGTGTCAATGTGCTCGA 60.057 43.478 0.00 0.00 0.00 4.04
328 329 3.592898 TGTAGTGTCAATGTGCTCGAT 57.407 42.857 0.00 0.00 0.00 3.59
329 330 3.925379 TGTAGTGTCAATGTGCTCGATT 58.075 40.909 0.00 0.00 0.00 3.34
330 331 4.314961 TGTAGTGTCAATGTGCTCGATTT 58.685 39.130 0.00 0.00 0.00 2.17
331 332 4.754618 TGTAGTGTCAATGTGCTCGATTTT 59.245 37.500 0.00 0.00 0.00 1.82
332 333 4.836125 AGTGTCAATGTGCTCGATTTTT 57.164 36.364 0.00 0.00 0.00 1.94
374 375 7.867445 ATTTTAAAATGTGCTACCGAGTTTG 57.133 32.000 12.62 0.00 0.00 2.93
375 376 3.915437 AAAATGTGCTACCGAGTTTGG 57.085 42.857 0.00 0.00 0.00 3.28
376 377 2.851263 AATGTGCTACCGAGTTTGGA 57.149 45.000 0.00 0.00 0.00 3.53
377 378 2.386661 ATGTGCTACCGAGTTTGGAG 57.613 50.000 0.00 0.00 0.00 3.86
378 379 0.320421 TGTGCTACCGAGTTTGGAGC 60.320 55.000 0.00 0.00 34.65 4.70
379 380 0.320421 GTGCTACCGAGTTTGGAGCA 60.320 55.000 0.00 0.00 38.77 4.26
380 381 0.320421 TGCTACCGAGTTTGGAGCAC 60.320 55.000 0.00 0.00 37.30 4.40
381 382 1.019805 GCTACCGAGTTTGGAGCACC 61.020 60.000 0.00 0.00 34.40 5.01
382 383 0.736325 CTACCGAGTTTGGAGCACCG 60.736 60.000 0.00 0.00 39.42 4.94
383 384 2.162338 TACCGAGTTTGGAGCACCGG 62.162 60.000 0.00 0.00 42.30 5.28
384 385 2.742372 CGAGTTTGGAGCACCGGG 60.742 66.667 6.32 0.00 39.42 5.73
385 386 2.747686 GAGTTTGGAGCACCGGGA 59.252 61.111 6.32 0.00 39.42 5.14
386 387 1.376037 GAGTTTGGAGCACCGGGAG 60.376 63.158 6.32 0.00 39.42 4.30
387 388 3.056328 GTTTGGAGCACCGGGAGC 61.056 66.667 6.32 10.14 39.42 4.70
388 389 3.565214 TTTGGAGCACCGGGAGCA 61.565 61.111 21.10 0.19 39.42 4.26
389 390 3.842925 TTTGGAGCACCGGGAGCAC 62.843 63.158 21.10 15.32 39.42 4.40
416 417 8.050930 CCTAGAGAGGGAGTAGTAGATATTTCC 58.949 44.444 0.00 0.00 39.48 3.13
417 418 6.796648 AGAGAGGGAGTAGTAGATATTTCCC 58.203 44.000 0.00 0.00 39.09 3.97
418 419 6.568823 AGAGAGGGAGTAGTAGATATTTCCCT 59.431 42.308 9.53 9.53 45.92 4.20
419 420 6.557568 AGAGGGAGTAGTAGATATTTCCCTG 58.442 44.000 14.23 0.00 44.49 4.45
420 421 6.104990 AGAGGGAGTAGTAGATATTTCCCTGT 59.895 42.308 14.23 7.84 44.49 4.00
421 422 6.316513 AGGGAGTAGTAGATATTTCCCTGTC 58.683 44.000 9.00 0.00 43.59 3.51
551 552 1.227263 CGTGATCACATCCCCCGTC 60.227 63.158 24.93 0.00 0.00 4.79
553 554 2.421739 GATCACATCCCCCGTCCG 59.578 66.667 0.00 0.00 0.00 4.79
554 555 2.042333 ATCACATCCCCCGTCCGA 60.042 61.111 0.00 0.00 0.00 4.55
555 556 1.459539 ATCACATCCCCCGTCCGAT 60.460 57.895 0.00 0.00 0.00 4.18
644 649 7.010183 ACCGTGAAAGATACGAGTAATCATTTG 59.990 37.037 0.00 0.00 43.82 2.32
726 739 2.202878 CGACCCATACAGCCACGG 60.203 66.667 0.00 0.00 0.00 4.94
758 772 3.480133 CCACTGACCCGATCCCCC 61.480 72.222 0.00 0.00 0.00 5.40
759 773 3.849951 CACTGACCCGATCCCCCG 61.850 72.222 0.00 0.00 0.00 5.73
913 928 1.161843 CGACGGTGCCCTTAAATTGT 58.838 50.000 0.00 0.00 0.00 2.71
953 968 1.226831 CTCCTCTCGCTTTCTCGCC 60.227 63.158 0.00 0.00 0.00 5.54
969 984 2.579787 CCACATCTCGCCGTCGAC 60.580 66.667 5.18 5.18 40.21 4.20
994 1009 1.478916 ACCCCGTTTCAAAAACCACAG 59.521 47.619 0.00 0.00 0.00 3.66
1004 1032 2.206576 AAAACCACAGGAGAGATGCC 57.793 50.000 0.00 0.00 0.00 4.40
1221 1276 2.506438 CTCTTCGGGCGGTTCGAC 60.506 66.667 0.00 0.00 36.30 4.20
1338 1393 3.589654 CTCGTTTCCGCCTGCCTGA 62.590 63.158 0.00 0.00 0.00 3.86
1373 1428 3.602483 GCCATTTCGTTAACTGGGAGTA 58.398 45.455 12.18 0.00 0.00 2.59
1379 1434 7.388500 CCATTTCGTTAACTGGGAGTAGTAAAA 59.612 37.037 3.71 0.00 0.00 1.52
1411 1466 2.740981 GGCATGTTCAGAGTTCAGACAG 59.259 50.000 0.00 0.00 0.00 3.51
1413 1468 2.533266 TGTTCAGAGTTCAGACAGCC 57.467 50.000 0.00 0.00 0.00 4.85
1415 1470 1.070758 GTTCAGAGTTCAGACAGCCCA 59.929 52.381 0.00 0.00 0.00 5.36
1416 1471 0.972134 TCAGAGTTCAGACAGCCCAG 59.028 55.000 0.00 0.00 0.00 4.45
1417 1472 0.683973 CAGAGTTCAGACAGCCCAGT 59.316 55.000 0.00 0.00 0.00 4.00
1451 1511 2.014857 TCGACACTCGTCATTCCTAGG 58.985 52.381 0.82 0.82 42.74 3.02
1460 1520 4.766375 TCGTCATTCCTAGGGTGAATTTC 58.234 43.478 16.30 6.42 30.16 2.17
1462 1522 3.312697 GTCATTCCTAGGGTGAATTTCGC 59.687 47.826 16.30 1.20 30.16 4.70
1465 1525 2.985896 TCCTAGGGTGAATTTCGCTTG 58.014 47.619 9.46 5.33 0.00 4.01
1519 1579 9.533253 CAGATTAAGGTGAAAATTGTCTTGTTT 57.467 29.630 0.00 0.00 0.00 2.83
1520 1580 9.533253 AGATTAAGGTGAAAATTGTCTTGTTTG 57.467 29.630 0.00 0.00 0.00 2.93
1541 1601 0.392461 GTCCCCTGCATTTGTCGCTA 60.392 55.000 0.00 0.00 0.00 4.26
1542 1602 0.326595 TCCCCTGCATTTGTCGCTAA 59.673 50.000 0.00 0.00 0.00 3.09
1582 1650 5.221126 GGAAACAAGTGTGAATTCAGAAGCT 60.221 40.000 8.80 0.00 0.00 3.74
1648 1724 4.277174 TGTTCTGGTTGACGCATAAATGTT 59.723 37.500 0.00 0.00 0.00 2.71
1650 1726 4.793071 TCTGGTTGACGCATAAATGTTTG 58.207 39.130 0.00 0.00 0.00 2.93
1651 1727 3.312828 TGGTTGACGCATAAATGTTTGC 58.687 40.909 0.00 0.00 35.50 3.68
1652 1728 3.243535 TGGTTGACGCATAAATGTTTGCA 60.244 39.130 0.00 0.00 38.80 4.08
1696 1772 2.202919 GCAATGAATTGGGGCGCC 60.203 61.111 21.18 21.18 38.21 6.53
1698 1774 1.595882 CAATGAATTGGGGCGCCAA 59.404 52.632 34.25 34.25 34.22 4.52
1699 1775 0.460635 CAATGAATTGGGGCGCCAAG 60.461 55.000 34.75 19.53 34.22 3.61
1700 1776 0.904394 AATGAATTGGGGCGCCAAGT 60.904 50.000 34.75 33.52 32.97 3.16
1715 1791 3.314635 CGCCAAGTAGTAGTACCAGTAGG 59.685 52.174 4.02 1.57 42.21 3.18
1716 1792 3.635836 GCCAAGTAGTAGTACCAGTAGGG 59.364 52.174 4.02 0.00 44.81 3.53
1769 1847 4.081309 TGTGTACCTACATGTCCTAAAGCC 60.081 45.833 0.00 0.00 38.63 4.35
1792 1870 6.073548 GCCTAAGGATACGACAGAATTTCATG 60.074 42.308 0.00 0.00 46.39 3.07
1859 1937 1.791103 GAGAGCATCGTCCTCTCCCG 61.791 65.000 14.50 0.00 46.08 5.14
1868 1946 0.108281 GTCCTCTCCCGGCAGTTAAC 60.108 60.000 0.00 0.00 0.00 2.01
1871 1949 0.320374 CTCTCCCGGCAGTTAACACA 59.680 55.000 8.61 0.00 0.00 3.72
1874 1952 0.322098 TCCCGGCAGTTAACACATGG 60.322 55.000 8.61 4.33 0.00 3.66
1881 1959 3.756434 GGCAGTTAACACATGGTGTACAT 59.244 43.478 8.61 0.00 46.79 2.29
1884 1962 5.278266 GCAGTTAACACATGGTGTACATTGT 60.278 40.000 8.61 0.86 46.79 2.71
1897 1975 9.959721 ATGGTGTACATTGTCTTAATTAAGTCT 57.040 29.630 21.69 6.24 35.97 3.24
1960 2073 4.859798 GTCTGTCTTAGACGTGAATTCCAG 59.140 45.833 7.92 0.00 45.77 3.86
1984 2097 1.763968 CCCGACTAGACACCATCTGA 58.236 55.000 0.00 0.00 38.49 3.27
1988 2101 4.261656 CCCGACTAGACACCATCTGAATAC 60.262 50.000 0.00 0.00 38.49 1.89
2031 2145 3.065925 GTCTGGTTCTGCATTATTCAGGC 59.934 47.826 0.00 0.00 32.63 4.85
2046 2160 2.688507 TCAGGCGACAGAATCTGAAAC 58.311 47.619 18.20 6.98 33.87 2.78
2069 2183 1.675641 CTGCCGTTTTGAGGAGGGG 60.676 63.158 0.00 0.00 0.00 4.79
2088 2202 6.280855 AGGGGAAAACAATAATTTTCTCGG 57.719 37.500 9.99 0.00 46.04 4.63
2094 2208 7.762159 GGAAAACAATAATTTTCTCGGGCATAA 59.238 33.333 9.99 0.00 44.54 1.90
2095 2209 8.702163 AAAACAATAATTTTCTCGGGCATAAG 57.298 30.769 0.00 0.00 0.00 1.73
2098 2212 8.154649 ACAATAATTTTCTCGGGCATAAGTAG 57.845 34.615 0.00 0.00 0.00 2.57
2118 2232 0.253044 TCATGGTGAACTAGCCAGGC 59.747 55.000 1.84 1.84 38.27 4.85
2120 2234 1.486310 CATGGTGAACTAGCCAGGCTA 59.514 52.381 20.66 20.66 40.44 3.93
2128 2242 4.345257 TGAACTAGCCAGGCTATTCTTAGG 59.655 45.833 27.01 17.10 40.54 2.69
2138 2252 4.480386 GCTATTCTTAGGCATGAACAGC 57.520 45.455 0.00 2.71 35.93 4.40
2146 2260 3.502237 GCATGAACAGCCAGGTTTG 57.498 52.632 0.00 0.00 0.00 2.93
2147 2261 0.675633 GCATGAACAGCCAGGTTTGT 59.324 50.000 0.00 0.00 0.00 2.83
2148 2262 1.069049 GCATGAACAGCCAGGTTTGTT 59.931 47.619 10.29 10.29 40.04 2.83
2182 2296 2.028385 CCACTAAGGCCGACTAAACACT 60.028 50.000 0.00 0.00 0.00 3.55
2192 2306 6.267928 AGGCCGACTAAACACTATCTGAATAT 59.732 38.462 0.00 0.00 0.00 1.28
2193 2307 6.929606 GGCCGACTAAACACTATCTGAATATT 59.070 38.462 0.00 0.00 0.00 1.28
2194 2308 7.095607 GGCCGACTAAACACTATCTGAATATTG 60.096 40.741 0.00 0.00 0.00 1.90
2195 2309 7.438459 GCCGACTAAACACTATCTGAATATTGT 59.562 37.037 0.00 0.00 33.90 2.71
2196 2310 9.961265 CCGACTAAACACTATCTGAATATTGTA 57.039 33.333 0.00 0.00 31.96 2.41
2224 2338 3.683802 CTTCAGGAGAAGCAACCTTGAT 58.316 45.455 0.00 0.00 44.25 2.57
2237 2351 5.352569 AGCAACCTTGATTCTGTATTCTTCG 59.647 40.000 0.00 0.00 0.00 3.79
2257 2371 1.672881 GGGCGACAGAATCTGGAATTG 59.327 52.381 15.38 0.00 35.51 2.32
2260 2374 3.426695 GGCGACAGAATCTGGAATTGTTG 60.427 47.826 15.38 0.00 35.51 3.33
2282 2399 2.509548 TGCCCCTTTGAGCATATGTAGT 59.490 45.455 4.29 0.00 33.08 2.73
2306 2429 4.693566 TCATGGTGTCCACGTTAAATCTTC 59.306 41.667 0.00 0.00 35.80 2.87
2308 2431 4.710324 TGGTGTCCACGTTAAATCTTCTT 58.290 39.130 0.00 0.00 0.00 2.52
2321 2444 7.409343 CGTTAAATCTTCTTTGCGTTCCATTTC 60.409 37.037 0.00 0.00 0.00 2.17
2323 2446 4.488126 TCTTCTTTGCGTTCCATTTCAG 57.512 40.909 0.00 0.00 0.00 3.02
2325 2448 3.624326 TCTTTGCGTTCCATTTCAGTG 57.376 42.857 0.00 0.00 0.00 3.66
2335 2458 7.551262 TGCGTTCCATTTCAGTGTATAACTAAT 59.449 33.333 0.00 0.00 36.83 1.73
2584 2707 1.554160 CTCTTCTCCACAGCACCATCT 59.446 52.381 0.00 0.00 0.00 2.90
2587 2710 1.351076 TCTCCACAGCACCATCTTCA 58.649 50.000 0.00 0.00 0.00 3.02
2591 2714 2.240414 TCCACAGCACCATCTTCATCAT 59.760 45.455 0.00 0.00 0.00 2.45
2593 2716 3.066342 CCACAGCACCATCTTCATCATTC 59.934 47.826 0.00 0.00 0.00 2.67
2597 2720 4.578928 CAGCACCATCTTCATCATTCATCA 59.421 41.667 0.00 0.00 0.00 3.07
2600 2723 5.920840 GCACCATCTTCATCATTCATCAATG 59.079 40.000 0.00 0.00 40.91 2.82
2601 2724 6.447162 CACCATCTTCATCATTCATCAATGG 58.553 40.000 0.00 0.00 40.08 3.16
2602 2725 6.040504 CACCATCTTCATCATTCATCAATGGT 59.959 38.462 0.00 0.00 43.79 3.55
2603 2726 6.264744 ACCATCTTCATCATTCATCAATGGTC 59.735 38.462 0.00 0.00 40.07 4.02
2605 2728 5.757988 TCTTCATCATTCATCAATGGTCCA 58.242 37.500 0.00 0.00 40.08 4.02
2606 2729 6.370453 TCTTCATCATTCATCAATGGTCCAT 58.630 36.000 0.00 0.00 40.08 3.41
2607 2730 6.489022 TCTTCATCATTCATCAATGGTCCATC 59.511 38.462 4.39 0.00 40.08 3.51
2638 2763 3.538591 TCCTGACATGCATGATCTTGTC 58.461 45.455 32.75 19.94 39.89 3.18
2650 2775 6.078479 GCATGATCTTGTCGATTGATTGATC 58.922 40.000 10.05 12.25 30.84 2.92
2812 2939 4.990288 GTCAAGACGGACTGGTCC 57.010 61.111 9.55 9.55 46.18 4.46
3078 3205 0.036577 CCCATCGGCAGGATCTGATC 60.037 60.000 9.18 9.18 32.44 2.92
3079 3206 0.975135 CCATCGGCAGGATCTGATCT 59.025 55.000 16.61 1.27 32.44 2.75
3080 3207 1.337917 CCATCGGCAGGATCTGATCTG 60.338 57.143 16.61 13.23 32.44 2.90
3081 3208 0.975135 ATCGGCAGGATCTGATCTGG 59.025 55.000 16.61 10.35 32.44 3.86
3082 3209 0.397675 TCGGCAGGATCTGATCTGGT 60.398 55.000 16.61 0.00 32.44 4.00
3089 3216 2.633967 AGGATCTGATCTGGTCTGATGC 59.366 50.000 17.54 17.54 46.73 3.91
3156 3283 1.859080 GCTTTGTCTCGTGACTCGTTT 59.141 47.619 17.64 0.00 43.29 3.60
3157 3284 2.347661 GCTTTGTCTCGTGACTCGTTTG 60.348 50.000 17.64 4.77 43.29 2.93
3158 3285 1.205657 TTGTCTCGTGACTCGTTTGC 58.794 50.000 17.64 0.00 43.29 3.68
3159 3286 0.101579 TGTCTCGTGACTCGTTTGCA 59.898 50.000 17.64 0.00 43.29 4.08
3182 3309 1.039233 AGGGATTGGATTTGCTGCCG 61.039 55.000 0.00 0.00 0.00 5.69
3199 3326 0.652592 CCGGCAGAATGTAAAGAGCG 59.347 55.000 0.00 0.00 39.31 5.03
3200 3327 0.652592 CGGCAGAATGTAAAGAGCGG 59.347 55.000 0.00 0.00 39.31 5.52
3201 3328 1.739035 CGGCAGAATGTAAAGAGCGGA 60.739 52.381 0.00 0.00 39.31 5.54
3202 3329 2.356135 GGCAGAATGTAAAGAGCGGAA 58.644 47.619 0.00 0.00 39.31 4.30
3203 3330 2.747446 GGCAGAATGTAAAGAGCGGAAA 59.253 45.455 0.00 0.00 39.31 3.13
3204 3331 3.190535 GGCAGAATGTAAAGAGCGGAAAA 59.809 43.478 0.00 0.00 39.31 2.29
3205 3332 4.320935 GGCAGAATGTAAAGAGCGGAAAAA 60.321 41.667 0.00 0.00 39.31 1.94
3206 3333 4.617223 GCAGAATGTAAAGAGCGGAAAAAC 59.383 41.667 0.00 0.00 39.31 2.43
3207 3334 5.757886 CAGAATGTAAAGAGCGGAAAAACA 58.242 37.500 0.00 0.00 0.00 2.83
3208 3335 5.625311 CAGAATGTAAAGAGCGGAAAAACAC 59.375 40.000 0.00 0.00 0.00 3.32
3209 3336 5.298276 AGAATGTAAAGAGCGGAAAAACACA 59.702 36.000 0.00 0.00 0.00 3.72
3210 3337 4.966965 TGTAAAGAGCGGAAAAACACAA 57.033 36.364 0.00 0.00 0.00 3.33
3211 3338 5.312120 TGTAAAGAGCGGAAAAACACAAA 57.688 34.783 0.00 0.00 0.00 2.83
3212 3339 5.897050 TGTAAAGAGCGGAAAAACACAAAT 58.103 33.333 0.00 0.00 0.00 2.32
3213 3340 5.746245 TGTAAAGAGCGGAAAAACACAAATG 59.254 36.000 0.00 0.00 0.00 2.32
3214 3341 4.647424 AAGAGCGGAAAAACACAAATGA 57.353 36.364 0.00 0.00 0.00 2.57
3215 3342 4.853924 AGAGCGGAAAAACACAAATGAT 57.146 36.364 0.00 0.00 0.00 2.45
3216 3343 4.798574 AGAGCGGAAAAACACAAATGATC 58.201 39.130 0.00 0.00 0.00 2.92
3217 3344 3.564511 AGCGGAAAAACACAAATGATCG 58.435 40.909 0.00 0.00 0.00 3.69
3218 3345 2.661195 GCGGAAAAACACAAATGATCGG 59.339 45.455 0.00 0.00 0.00 4.18
3219 3346 3.610585 GCGGAAAAACACAAATGATCGGA 60.611 43.478 0.00 0.00 0.00 4.55
3220 3347 4.158384 CGGAAAAACACAAATGATCGGAG 58.842 43.478 0.00 0.00 0.00 4.63
3221 3348 3.920412 GGAAAAACACAAATGATCGGAGC 59.080 43.478 0.00 0.00 0.00 4.70
3222 3349 2.900122 AAACACAAATGATCGGAGCG 57.100 45.000 0.00 0.00 0.00 5.03
3223 3350 0.447801 AACACAAATGATCGGAGCGC 59.552 50.000 0.00 0.00 0.00 5.92
3224 3351 0.391661 ACACAAATGATCGGAGCGCT 60.392 50.000 11.27 11.27 0.00 5.92
3225 3352 0.729116 CACAAATGATCGGAGCGCTT 59.271 50.000 13.26 0.00 0.00 4.68
3226 3353 1.131126 CACAAATGATCGGAGCGCTTT 59.869 47.619 13.26 0.00 0.00 3.51
3227 3354 1.131126 ACAAATGATCGGAGCGCTTTG 59.869 47.619 13.26 12.18 0.00 2.77
3228 3355 1.131126 CAAATGATCGGAGCGCTTTGT 59.869 47.619 13.26 0.00 0.00 2.83
3229 3356 1.453155 AATGATCGGAGCGCTTTGTT 58.547 45.000 13.26 1.74 0.00 2.83
3230 3357 1.453155 ATGATCGGAGCGCTTTGTTT 58.547 45.000 13.26 0.00 0.00 2.83
3231 3358 0.796312 TGATCGGAGCGCTTTGTTTC 59.204 50.000 13.26 6.37 0.00 2.78
3232 3359 1.079503 GATCGGAGCGCTTTGTTTCT 58.920 50.000 13.26 0.00 0.00 2.52
3233 3360 1.061276 GATCGGAGCGCTTTGTTTCTC 59.939 52.381 13.26 0.00 0.00 2.87
3234 3361 0.949105 TCGGAGCGCTTTGTTTCTCC 60.949 55.000 13.26 4.40 41.20 3.71
3235 3362 0.951040 CGGAGCGCTTTGTTTCTCCT 60.951 55.000 13.26 0.00 42.15 3.69
3236 3363 0.799393 GGAGCGCTTTGTTTCTCCTC 59.201 55.000 13.26 0.00 41.35 3.71
3237 3364 0.440371 GAGCGCTTTGTTTCTCCTCG 59.560 55.000 13.26 0.00 0.00 4.63
3238 3365 0.249911 AGCGCTTTGTTTCTCCTCGT 60.250 50.000 2.64 0.00 0.00 4.18
3239 3366 0.586802 GCGCTTTGTTTCTCCTCGTT 59.413 50.000 0.00 0.00 0.00 3.85
3240 3367 1.398578 GCGCTTTGTTTCTCCTCGTTC 60.399 52.381 0.00 0.00 0.00 3.95
3241 3368 1.136611 CGCTTTGTTTCTCCTCGTTCG 60.137 52.381 0.00 0.00 0.00 3.95
3242 3369 2.132762 GCTTTGTTTCTCCTCGTTCGA 58.867 47.619 0.00 0.00 0.00 3.71
3243 3370 2.737252 GCTTTGTTTCTCCTCGTTCGAT 59.263 45.455 0.00 0.00 0.00 3.59
3244 3371 3.423645 GCTTTGTTTCTCCTCGTTCGATG 60.424 47.826 0.00 0.00 0.00 3.84
3245 3372 3.653539 TTGTTTCTCCTCGTTCGATGA 57.346 42.857 0.00 0.00 0.00 2.92
3246 3373 3.217599 TGTTTCTCCTCGTTCGATGAG 57.782 47.619 16.97 16.97 0.00 2.90
3247 3374 1.921230 GTTTCTCCTCGTTCGATGAGC 59.079 52.381 17.84 5.64 29.93 4.26
3248 3375 1.464734 TTCTCCTCGTTCGATGAGCT 58.535 50.000 17.84 0.00 29.93 4.09
3249 3376 1.464734 TCTCCTCGTTCGATGAGCTT 58.535 50.000 17.84 0.00 29.93 3.74
3250 3377 1.819288 TCTCCTCGTTCGATGAGCTTT 59.181 47.619 17.84 0.00 29.93 3.51
3251 3378 2.231478 TCTCCTCGTTCGATGAGCTTTT 59.769 45.455 17.84 0.00 29.93 2.27
3252 3379 2.337583 TCCTCGTTCGATGAGCTTTTG 58.662 47.619 9.15 0.00 29.93 2.44
3253 3380 2.069273 CCTCGTTCGATGAGCTTTTGT 58.931 47.619 9.15 0.00 29.93 2.83
3254 3381 2.159787 CCTCGTTCGATGAGCTTTTGTG 60.160 50.000 9.15 0.00 29.93 3.33
3255 3382 2.476619 CTCGTTCGATGAGCTTTTGTGT 59.523 45.455 2.65 0.00 0.00 3.72
3256 3383 2.869801 TCGTTCGATGAGCTTTTGTGTT 59.130 40.909 0.00 0.00 0.00 3.32
3257 3384 4.052608 TCGTTCGATGAGCTTTTGTGTTA 58.947 39.130 0.00 0.00 0.00 2.41
3258 3385 4.149922 TCGTTCGATGAGCTTTTGTGTTAG 59.850 41.667 0.00 0.00 0.00 2.34
3259 3386 4.666655 CGTTCGATGAGCTTTTGTGTTAGG 60.667 45.833 0.00 0.00 0.00 2.69
3260 3387 2.742053 TCGATGAGCTTTTGTGTTAGGC 59.258 45.455 0.00 0.00 0.00 3.93
3261 3388 2.474526 CGATGAGCTTTTGTGTTAGGCG 60.475 50.000 0.00 0.00 0.00 5.52
3262 3389 0.591170 TGAGCTTTTGTGTTAGGCGC 59.409 50.000 0.00 0.00 0.00 6.53
3263 3390 0.875059 GAGCTTTTGTGTTAGGCGCT 59.125 50.000 7.64 0.00 0.00 5.92
3264 3391 1.266989 GAGCTTTTGTGTTAGGCGCTT 59.733 47.619 7.64 0.52 0.00 4.68
3265 3392 1.266989 AGCTTTTGTGTTAGGCGCTTC 59.733 47.619 7.64 0.00 0.00 3.86
3266 3393 1.001815 GCTTTTGTGTTAGGCGCTTCA 60.002 47.619 7.64 0.00 0.00 3.02
3267 3394 2.542824 GCTTTTGTGTTAGGCGCTTCAA 60.543 45.455 7.64 0.00 0.00 2.69
3268 3395 3.701241 CTTTTGTGTTAGGCGCTTCAAA 58.299 40.909 7.64 3.47 0.00 2.69
3269 3396 4.298332 CTTTTGTGTTAGGCGCTTCAAAT 58.702 39.130 7.64 0.00 0.00 2.32
3270 3397 3.552604 TTGTGTTAGGCGCTTCAAATC 57.447 42.857 7.64 0.00 0.00 2.17
3271 3398 1.463056 TGTGTTAGGCGCTTCAAATCG 59.537 47.619 7.64 0.00 0.00 3.34
3272 3399 1.730064 GTGTTAGGCGCTTCAAATCGA 59.270 47.619 7.64 0.00 0.00 3.59
3273 3400 2.351726 GTGTTAGGCGCTTCAAATCGAT 59.648 45.455 7.64 0.00 0.00 3.59
3274 3401 3.006940 TGTTAGGCGCTTCAAATCGATT 58.993 40.909 7.64 4.39 0.00 3.34
3275 3402 3.438781 TGTTAGGCGCTTCAAATCGATTT 59.561 39.130 17.60 17.60 0.00 2.17
3276 3403 4.632251 TGTTAGGCGCTTCAAATCGATTTA 59.368 37.500 22.33 8.04 0.00 1.40
3277 3404 5.122554 TGTTAGGCGCTTCAAATCGATTTAA 59.877 36.000 22.33 6.32 0.00 1.52
3278 3405 4.278678 AGGCGCTTCAAATCGATTTAAG 57.721 40.909 22.33 22.36 0.00 1.85
3279 3406 3.689649 AGGCGCTTCAAATCGATTTAAGT 59.310 39.130 22.33 0.00 0.00 2.24
3280 3407 4.156008 AGGCGCTTCAAATCGATTTAAGTT 59.844 37.500 22.33 0.00 0.00 2.66
3284 3411 6.305638 GCGCTTCAAATCGATTTAAGTTTCTT 59.694 34.615 22.33 0.00 0.00 2.52
3361 3490 1.995484 ACAATGCTCACAATCTCGTCG 59.005 47.619 0.00 0.00 0.00 5.12
3440 3569 6.750148 AGAGTATGGCTAGCTATGTTTACAC 58.250 40.000 22.65 11.86 0.00 2.90
3444 3573 6.732896 ATGGCTAGCTATGTTTACACTACT 57.267 37.500 13.43 0.00 0.00 2.57
3525 3654 6.877236 TCACTTTATGAGTATGTGCTGATCA 58.123 36.000 0.00 0.00 36.65 2.92
3570 3699 2.753055 TGTACAGCTTCGGCACAATA 57.247 45.000 0.00 0.00 44.74 1.90
3593 3722 1.072173 TCTCCACCACAATGTCCAGTG 59.928 52.381 1.89 1.89 35.56 3.66
3654 3783 2.030562 CAACTCGGCCTCCAACGT 59.969 61.111 0.00 0.00 0.00 3.99
3727 3856 0.465705 GATCACGGAGAAGCATCCCA 59.534 55.000 0.00 0.00 35.82 4.37
3728 3857 0.179000 ATCACGGAGAAGCATCCCAC 59.821 55.000 0.00 0.00 35.82 4.61
3729 3858 1.811266 CACGGAGAAGCATCCCACG 60.811 63.158 0.00 0.00 35.82 4.94
3803 3935 4.740822 GGGCTGGCGGTGTCCAAT 62.741 66.667 0.00 0.00 35.36 3.16
3878 4010 2.242708 ACCACCTGTTTACCTTTGGTCA 59.757 45.455 0.00 0.00 37.09 4.02
3952 4084 2.676822 AAGCGACGAGAGGCCTCA 60.677 61.111 33.90 0.00 39.39 3.86
4032 4164 8.537858 CCATAGGATCATCATAATGAAGAGTCA 58.462 37.037 0.00 0.00 44.85 3.41
4043 4176 3.140325 TGAAGAGTCATTGGGGAACAC 57.860 47.619 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.403137 TTTCACATGGCTGCGCGC 62.403 61.111 27.26 27.26 38.13 6.86
21 22 2.202388 CTTTCACATGGCTGCGCG 60.202 61.111 0.00 0.00 0.00 6.86
22 23 2.180017 CCTTTCACATGGCTGCGC 59.820 61.111 0.00 0.00 0.00 6.09
23 24 1.210931 CACCTTTCACATGGCTGCG 59.789 57.895 0.00 0.00 0.00 5.18
28 29 1.086696 CTACGGCACCTTTCACATGG 58.913 55.000 0.00 0.00 0.00 3.66
108 109 0.765510 ATATTTCCTCGGGGCTGGAC 59.234 55.000 0.00 0.00 31.24 4.02
109 110 1.056660 GATATTTCCTCGGGGCTGGA 58.943 55.000 0.00 0.00 0.00 3.86
110 111 1.059913 AGATATTTCCTCGGGGCTGG 58.940 55.000 0.00 0.00 0.00 4.85
111 112 1.271054 CCAGATATTTCCTCGGGGCTG 60.271 57.143 0.00 0.00 0.00 4.85
112 113 1.059913 CCAGATATTTCCTCGGGGCT 58.940 55.000 0.00 0.00 0.00 5.19
113 114 0.765510 ACCAGATATTTCCTCGGGGC 59.234 55.000 0.00 0.00 32.89 5.80
114 115 3.240302 AGTACCAGATATTTCCTCGGGG 58.760 50.000 0.00 0.00 32.89 5.73
115 116 4.153411 AGAGTACCAGATATTTCCTCGGG 58.847 47.826 0.00 0.00 34.55 5.14
116 117 5.793030 AAGAGTACCAGATATTTCCTCGG 57.207 43.478 0.00 0.00 0.00 4.63
117 118 7.363094 GGGATAAGAGTACCAGATATTTCCTCG 60.363 44.444 0.00 0.00 0.00 4.63
118 119 7.676468 AGGGATAAGAGTACCAGATATTTCCTC 59.324 40.741 0.00 0.00 0.00 3.71
119 120 7.549141 AGGGATAAGAGTACCAGATATTTCCT 58.451 38.462 0.00 0.00 0.00 3.36
120 121 7.800300 AGGGATAAGAGTACCAGATATTTCC 57.200 40.000 0.00 0.00 0.00 3.13
121 122 8.973182 CCTAGGGATAAGAGTACCAGATATTTC 58.027 40.741 0.00 0.00 0.00 2.17
122 123 7.901861 CCCTAGGGATAAGAGTACCAGATATTT 59.098 40.741 24.99 0.00 37.50 1.40
123 124 7.020781 ACCCTAGGGATAAGAGTACCAGATATT 59.979 40.741 35.38 1.07 38.96 1.28
124 125 6.513260 ACCCTAGGGATAAGAGTACCAGATAT 59.487 42.308 35.38 1.44 38.96 1.63
125 126 5.861798 ACCCTAGGGATAAGAGTACCAGATA 59.138 44.000 35.38 0.00 38.96 1.98
126 127 4.675550 ACCCTAGGGATAAGAGTACCAGAT 59.324 45.833 35.38 2.28 38.96 2.90
127 128 4.060192 ACCCTAGGGATAAGAGTACCAGA 58.940 47.826 35.38 0.00 38.96 3.86
128 129 4.153411 CACCCTAGGGATAAGAGTACCAG 58.847 52.174 35.38 2.34 38.96 4.00
129 130 3.693359 GCACCCTAGGGATAAGAGTACCA 60.693 52.174 35.38 0.00 38.96 3.25
130 131 2.898612 GCACCCTAGGGATAAGAGTACC 59.101 54.545 35.38 5.61 38.96 3.34
131 132 3.827876 GAGCACCCTAGGGATAAGAGTAC 59.172 52.174 35.38 11.45 38.96 2.73
132 133 3.181420 GGAGCACCCTAGGGATAAGAGTA 60.181 52.174 35.38 0.00 38.96 2.59
133 134 2.426561 GGAGCACCCTAGGGATAAGAGT 60.427 54.545 35.38 6.95 38.96 3.24
134 135 2.158234 AGGAGCACCCTAGGGATAAGAG 60.158 54.545 35.38 16.11 45.48 2.85
135 136 1.866943 AGGAGCACCCTAGGGATAAGA 59.133 52.381 35.38 0.00 45.48 2.10
136 137 1.974236 CAGGAGCACCCTAGGGATAAG 59.026 57.143 35.38 20.20 45.60 1.73
137 138 1.578703 TCAGGAGCACCCTAGGGATAA 59.421 52.381 35.38 7.48 45.60 1.75
138 139 1.241485 TCAGGAGCACCCTAGGGATA 58.759 55.000 35.38 6.92 45.60 2.59
139 140 0.570218 ATCAGGAGCACCCTAGGGAT 59.430 55.000 35.38 19.11 45.60 3.85
140 141 0.399091 CATCAGGAGCACCCTAGGGA 60.399 60.000 35.38 9.66 45.60 4.20
141 142 2.049627 GCATCAGGAGCACCCTAGGG 62.050 65.000 27.36 27.36 45.60 3.53
142 143 1.053264 AGCATCAGGAGCACCCTAGG 61.053 60.000 0.06 0.06 45.60 3.02
143 144 0.835941 AAGCATCAGGAGCACCCTAG 59.164 55.000 0.00 0.00 45.60 3.02
144 145 0.833287 GAAGCATCAGGAGCACCCTA 59.167 55.000 0.00 0.00 45.60 3.53
146 147 0.322816 TTGAAGCATCAGGAGCACCC 60.323 55.000 0.00 0.00 36.78 4.61
147 148 1.538047 TTTGAAGCATCAGGAGCACC 58.462 50.000 0.00 0.00 36.78 5.01
148 149 2.555757 AGTTTTGAAGCATCAGGAGCAC 59.444 45.455 0.00 0.00 36.78 4.40
149 150 2.867624 AGTTTTGAAGCATCAGGAGCA 58.132 42.857 0.00 0.00 36.78 4.26
150 151 3.930634 AAGTTTTGAAGCATCAGGAGC 57.069 42.857 0.00 0.00 36.78 4.70
151 152 6.183360 GCTACTAAGTTTTGAAGCATCAGGAG 60.183 42.308 0.00 0.00 36.78 3.69
152 153 5.643777 GCTACTAAGTTTTGAAGCATCAGGA 59.356 40.000 0.00 0.00 36.78 3.86
153 154 5.412594 TGCTACTAAGTTTTGAAGCATCAGG 59.587 40.000 0.00 0.00 36.78 3.86
154 155 6.073058 TGTGCTACTAAGTTTTGAAGCATCAG 60.073 38.462 0.00 0.00 41.53 2.90
155 156 5.762711 TGTGCTACTAAGTTTTGAAGCATCA 59.237 36.000 0.00 0.00 41.53 3.07
156 157 6.241207 TGTGCTACTAAGTTTTGAAGCATC 57.759 37.500 0.00 0.00 41.53 3.91
157 158 6.824305 ATGTGCTACTAAGTTTTGAAGCAT 57.176 33.333 0.00 0.00 41.53 3.79
158 159 6.633500 AATGTGCTACTAAGTTTTGAAGCA 57.367 33.333 0.00 0.00 37.62 3.91
159 160 7.930513 AAAATGTGCTACTAAGTTTTGAAGC 57.069 32.000 0.00 0.00 0.00 3.86
206 207 6.580788 TGTTGTGTCAATGTGATGGATTTTT 58.419 32.000 0.00 0.00 0.00 1.94
207 208 6.159299 TGTTGTGTCAATGTGATGGATTTT 57.841 33.333 0.00 0.00 0.00 1.82
208 209 5.787953 TGTTGTGTCAATGTGATGGATTT 57.212 34.783 0.00 0.00 0.00 2.17
209 210 5.477637 TGATGTTGTGTCAATGTGATGGATT 59.522 36.000 0.00 0.00 0.00 3.01
210 211 5.011586 TGATGTTGTGTCAATGTGATGGAT 58.988 37.500 0.00 0.00 0.00 3.41
211 212 4.396522 TGATGTTGTGTCAATGTGATGGA 58.603 39.130 0.00 0.00 0.00 3.41
212 213 4.769859 TGATGTTGTGTCAATGTGATGG 57.230 40.909 0.00 0.00 0.00 3.51
213 214 6.210796 ACTTTGATGTTGTGTCAATGTGATG 58.789 36.000 6.60 0.00 40.37 3.07
214 215 6.395426 ACTTTGATGTTGTGTCAATGTGAT 57.605 33.333 6.60 0.00 40.37 3.06
215 216 5.833406 ACTTTGATGTTGTGTCAATGTGA 57.167 34.783 6.60 0.00 40.37 3.58
216 217 7.140705 ACATACTTTGATGTTGTGTCAATGTG 58.859 34.615 14.03 5.03 41.30 3.21
217 218 7.275888 ACATACTTTGATGTTGTGTCAATGT 57.724 32.000 10.74 10.74 42.74 2.71
234 235 9.653287 TCGAGATAGAAAAATGACAACATACTT 57.347 29.630 0.00 0.00 35.50 2.24
235 236 9.307121 CTCGAGATAGAAAAATGACAACATACT 57.693 33.333 6.58 0.00 35.50 2.12
236 237 8.058915 GCTCGAGATAGAAAAATGACAACATAC 58.941 37.037 18.75 0.00 35.50 2.39
237 238 7.763985 TGCTCGAGATAGAAAAATGACAACATA 59.236 33.333 18.75 0.00 35.50 2.29
238 239 6.595326 TGCTCGAGATAGAAAAATGACAACAT 59.405 34.615 18.75 0.00 38.50 2.71
239 240 5.931724 TGCTCGAGATAGAAAAATGACAACA 59.068 36.000 18.75 0.00 0.00 3.33
240 241 6.408858 TGCTCGAGATAGAAAAATGACAAC 57.591 37.500 18.75 0.00 0.00 3.32
241 242 7.119699 ACATTGCTCGAGATAGAAAAATGACAA 59.880 33.333 18.75 6.18 32.15 3.18
242 243 6.595326 ACATTGCTCGAGATAGAAAAATGACA 59.405 34.615 18.75 0.00 32.15 3.58
243 244 7.009568 ACATTGCTCGAGATAGAAAAATGAC 57.990 36.000 18.75 0.00 32.15 3.06
244 245 7.615582 AACATTGCTCGAGATAGAAAAATGA 57.384 32.000 18.75 0.00 32.15 2.57
245 246 7.964559 TGAAACATTGCTCGAGATAGAAAAATG 59.035 33.333 18.75 14.25 33.12 2.32
246 247 8.044060 TGAAACATTGCTCGAGATAGAAAAAT 57.956 30.769 18.75 0.84 0.00 1.82
247 248 7.433708 TGAAACATTGCTCGAGATAGAAAAA 57.566 32.000 18.75 0.00 0.00 1.94
248 249 7.433708 TTGAAACATTGCTCGAGATAGAAAA 57.566 32.000 18.75 0.13 0.00 2.29
249 250 7.433708 TTTGAAACATTGCTCGAGATAGAAA 57.566 32.000 18.75 2.00 0.00 2.52
250 251 7.615582 ATTTGAAACATTGCTCGAGATAGAA 57.384 32.000 18.75 2.76 0.00 2.10
251 252 7.615582 AATTTGAAACATTGCTCGAGATAGA 57.384 32.000 18.75 0.00 0.00 1.98
252 253 8.581263 CAAAATTTGAAACATTGCTCGAGATAG 58.419 33.333 18.75 4.80 0.00 2.08
253 254 8.296000 TCAAAATTTGAAACATTGCTCGAGATA 58.704 29.630 18.75 2.54 36.59 1.98
254 255 7.147312 TCAAAATTTGAAACATTGCTCGAGAT 58.853 30.769 18.75 0.00 36.59 2.75
255 256 6.502652 TCAAAATTTGAAACATTGCTCGAGA 58.497 32.000 18.75 0.00 36.59 4.04
256 257 6.752335 TCAAAATTTGAAACATTGCTCGAG 57.248 33.333 8.45 8.45 36.59 4.04
257 258 7.712264 AATCAAAATTTGAAACATTGCTCGA 57.288 28.000 12.75 0.00 43.95 4.04
258 259 9.861138 TTAAATCAAAATTTGAAACATTGCTCG 57.139 25.926 12.75 0.00 43.95 5.03
291 292 9.495572 TGACACTACATCAATGTATGTTGTTAA 57.504 29.630 14.07 6.15 41.11 2.01
292 293 9.495572 TTGACACTACATCAATGTATGTTGTTA 57.504 29.630 14.07 8.54 41.11 2.41
293 294 7.977789 TGACACTACATCAATGTATGTTGTT 57.022 32.000 14.07 4.17 41.11 2.83
294 295 7.977789 TTGACACTACATCAATGTATGTTGT 57.022 32.000 14.07 12.11 43.49 3.32
303 304 4.330894 CGAGCACATTGACACTACATCAAT 59.669 41.667 0.00 0.00 45.57 2.57
304 305 3.679502 CGAGCACATTGACACTACATCAA 59.320 43.478 0.00 0.00 40.25 2.57
305 306 3.056891 TCGAGCACATTGACACTACATCA 60.057 43.478 0.00 0.00 0.00 3.07
306 307 3.511699 TCGAGCACATTGACACTACATC 58.488 45.455 0.00 0.00 0.00 3.06
307 308 3.592898 TCGAGCACATTGACACTACAT 57.407 42.857 0.00 0.00 0.00 2.29
308 309 3.592898 ATCGAGCACATTGACACTACA 57.407 42.857 0.00 0.00 0.00 2.74
309 310 4.928661 AAATCGAGCACATTGACACTAC 57.071 40.909 0.00 0.00 0.00 2.73
310 311 5.940192 AAAAATCGAGCACATTGACACTA 57.060 34.783 0.00 0.00 0.00 2.74
311 312 4.836125 AAAAATCGAGCACATTGACACT 57.164 36.364 0.00 0.00 0.00 3.55
348 349 9.567848 CAAACTCGGTAGCACATTTTAAAATAT 57.432 29.630 12.98 0.00 0.00 1.28
349 350 8.024285 CCAAACTCGGTAGCACATTTTAAAATA 58.976 33.333 12.98 0.00 0.00 1.40
350 351 6.866248 CCAAACTCGGTAGCACATTTTAAAAT 59.134 34.615 7.64 7.64 0.00 1.82
351 352 6.039493 TCCAAACTCGGTAGCACATTTTAAAA 59.961 34.615 2.51 2.51 0.00 1.52
352 353 5.531659 TCCAAACTCGGTAGCACATTTTAAA 59.468 36.000 0.00 0.00 0.00 1.52
353 354 5.064558 TCCAAACTCGGTAGCACATTTTAA 58.935 37.500 0.00 0.00 0.00 1.52
354 355 4.643463 TCCAAACTCGGTAGCACATTTTA 58.357 39.130 0.00 0.00 0.00 1.52
355 356 3.482436 TCCAAACTCGGTAGCACATTTT 58.518 40.909 0.00 0.00 0.00 1.82
356 357 3.074412 CTCCAAACTCGGTAGCACATTT 58.926 45.455 0.00 0.00 0.00 2.32
357 358 2.699954 CTCCAAACTCGGTAGCACATT 58.300 47.619 0.00 0.00 0.00 2.71
358 359 1.676014 GCTCCAAACTCGGTAGCACAT 60.676 52.381 0.00 0.00 32.61 3.21
359 360 0.320421 GCTCCAAACTCGGTAGCACA 60.320 55.000 0.00 0.00 32.61 4.57
360 361 0.320421 TGCTCCAAACTCGGTAGCAC 60.320 55.000 0.00 0.00 35.58 4.40
361 362 0.320421 GTGCTCCAAACTCGGTAGCA 60.320 55.000 0.00 0.00 37.07 3.49
362 363 1.019805 GGTGCTCCAAACTCGGTAGC 61.020 60.000 0.00 0.00 32.83 3.58
363 364 0.736325 CGGTGCTCCAAACTCGGTAG 60.736 60.000 5.52 0.00 0.00 3.18
364 365 1.290955 CGGTGCTCCAAACTCGGTA 59.709 57.895 5.52 0.00 0.00 4.02
365 366 2.030562 CGGTGCTCCAAACTCGGT 59.969 61.111 5.52 0.00 0.00 4.69
366 367 2.742372 CCGGTGCTCCAAACTCGG 60.742 66.667 5.52 0.00 0.00 4.63
367 368 2.742372 CCCGGTGCTCCAAACTCG 60.742 66.667 0.00 0.00 0.00 4.18
368 369 1.376037 CTCCCGGTGCTCCAAACTC 60.376 63.158 0.00 0.00 0.00 3.01
369 370 2.750350 CTCCCGGTGCTCCAAACT 59.250 61.111 0.00 0.00 0.00 2.66
370 371 3.056328 GCTCCCGGTGCTCCAAAC 61.056 66.667 0.00 0.00 0.00 2.93
371 372 3.565214 TGCTCCCGGTGCTCCAAA 61.565 61.111 16.01 0.00 0.00 3.28
372 373 4.329545 GTGCTCCCGGTGCTCCAA 62.330 66.667 16.01 0.00 0.00 3.53
390 391 8.050930 GGAAATATCTACTACTCCCTCTCTAGG 58.949 44.444 0.00 0.00 43.25 3.02
391 392 8.050930 GGGAAATATCTACTACTCCCTCTCTAG 58.949 44.444 0.00 0.00 39.61 2.43
392 393 7.931046 GGGAAATATCTACTACTCCCTCTCTA 58.069 42.308 0.00 0.00 39.61 2.43
393 394 6.796648 GGGAAATATCTACTACTCCCTCTCT 58.203 44.000 0.00 0.00 39.61 3.10
398 399 5.481122 GGACAGGGAAATATCTACTACTCCC 59.519 48.000 0.00 0.00 42.52 4.30
399 400 6.075984 TGGACAGGGAAATATCTACTACTCC 58.924 44.000 0.00 0.00 0.00 3.85
400 401 6.294843 GCTGGACAGGGAAATATCTACTACTC 60.295 46.154 1.01 0.00 0.00 2.59
401 402 5.540719 GCTGGACAGGGAAATATCTACTACT 59.459 44.000 1.01 0.00 0.00 2.57
402 403 5.279556 GGCTGGACAGGGAAATATCTACTAC 60.280 48.000 1.01 0.00 0.00 2.73
403 404 4.838986 GGCTGGACAGGGAAATATCTACTA 59.161 45.833 1.01 0.00 0.00 1.82
404 405 3.648545 GGCTGGACAGGGAAATATCTACT 59.351 47.826 1.01 0.00 0.00 2.57
405 406 3.555168 CGGCTGGACAGGGAAATATCTAC 60.555 52.174 1.01 0.00 0.00 2.59
406 407 2.632996 CGGCTGGACAGGGAAATATCTA 59.367 50.000 1.01 0.00 0.00 1.98
407 408 1.417890 CGGCTGGACAGGGAAATATCT 59.582 52.381 1.01 0.00 0.00 1.98
408 409 1.884235 CGGCTGGACAGGGAAATATC 58.116 55.000 1.01 0.00 0.00 1.63
409 410 0.179018 GCGGCTGGACAGGGAAATAT 60.179 55.000 1.01 0.00 0.00 1.28
410 411 1.223487 GCGGCTGGACAGGGAAATA 59.777 57.895 1.01 0.00 0.00 1.40
411 412 2.044946 GCGGCTGGACAGGGAAAT 60.045 61.111 1.01 0.00 0.00 2.17
412 413 4.344865 GGCGGCTGGACAGGGAAA 62.345 66.667 0.00 0.00 0.00 3.13
413 414 3.916438 TAGGCGGCTGGACAGGGAA 62.916 63.158 23.55 0.00 0.00 3.97
414 415 4.392166 TAGGCGGCTGGACAGGGA 62.392 66.667 23.55 0.00 0.00 4.20
415 416 4.162690 GTAGGCGGCTGGACAGGG 62.163 72.222 23.55 0.00 0.00 4.45
416 417 3.077556 AGTAGGCGGCTGGACAGG 61.078 66.667 23.55 0.00 0.00 4.00
417 418 2.496817 GAGTAGGCGGCTGGACAG 59.503 66.667 23.55 0.00 0.00 3.51
418 419 2.219449 TAGGAGTAGGCGGCTGGACA 62.219 60.000 23.55 0.00 0.00 4.02
419 420 1.455217 TAGGAGTAGGCGGCTGGAC 60.455 63.158 23.55 13.11 0.00 4.02
420 421 1.455217 GTAGGAGTAGGCGGCTGGA 60.455 63.158 23.55 0.00 0.00 3.86
421 422 1.756950 TGTAGGAGTAGGCGGCTGG 60.757 63.158 23.55 0.00 0.00 4.85
487 488 5.657470 TTCGGAGATTTGAATGCGAATAG 57.343 39.130 0.00 0.00 42.99 1.73
758 772 2.579241 CTACAGAGTCGACGGCACCG 62.579 65.000 10.46 7.71 46.03 4.94
759 773 1.136984 CTACAGAGTCGACGGCACC 59.863 63.158 10.46 0.00 0.00 5.01
760 774 1.514443 GCTACAGAGTCGACGGCAC 60.514 63.158 10.46 0.00 0.00 5.01
905 920 2.164338 GGGGGCTCGTGAACAATTTAA 58.836 47.619 0.00 0.00 0.00 1.52
969 984 2.017559 TTTTTGAAACGGGGTGGCGG 62.018 55.000 0.00 0.00 0.00 6.13
979 994 5.523369 CATCTCTCCTGTGGTTTTTGAAAC 58.477 41.667 0.00 0.00 0.00 2.78
1014 1042 1.506718 CAGCAGCAGCCAACAGATG 59.493 57.895 0.00 0.00 43.56 2.90
1015 1043 1.677966 CCAGCAGCAGCCAACAGAT 60.678 57.895 0.00 0.00 43.56 2.90
1221 1276 1.064946 GACGAGCCTGATGTCGAGG 59.935 63.158 0.00 0.00 39.53 4.63
1254 1309 1.077429 GAAGGAGGTGATGGTGCCC 60.077 63.158 0.00 0.00 0.00 5.36
1257 1312 1.825474 ACGTAGAAGGAGGTGATGGTG 59.175 52.381 0.00 0.00 0.00 4.17
1379 1434 3.960102 TCTGAACATGCCCAACTCTTTTT 59.040 39.130 0.00 0.00 0.00 1.94
1392 1447 2.740981 GGCTGTCTGAACTCTGAACATG 59.259 50.000 0.00 0.00 0.00 3.21
1393 1448 2.289945 GGGCTGTCTGAACTCTGAACAT 60.290 50.000 0.00 0.00 0.00 2.71
1411 1466 1.375523 CTCGTGTGGGTAACTGGGC 60.376 63.158 0.00 0.00 0.00 5.36
1413 1468 1.792006 GAACTCGTGTGGGTAACTGG 58.208 55.000 0.00 0.00 0.00 4.00
1415 1470 1.000938 GTCGAACTCGTGTGGGTAACT 60.001 52.381 0.00 0.00 40.80 2.24
1416 1471 1.269206 TGTCGAACTCGTGTGGGTAAC 60.269 52.381 0.00 0.00 40.80 2.50
1417 1472 1.031235 TGTCGAACTCGTGTGGGTAA 58.969 50.000 0.00 0.00 40.80 2.85
1451 1511 3.237628 GCTTTCTCAAGCGAAATTCACC 58.762 45.455 0.00 0.00 46.06 4.02
1495 1555 8.764287 CCAAACAAGACAATTTTCACCTTAATC 58.236 33.333 0.00 0.00 0.00 1.75
1541 1601 0.542702 TCCTCCGGGGACTACGTTTT 60.543 55.000 0.37 0.00 39.58 2.43
1542 1602 0.542702 TTCCTCCGGGGACTACGTTT 60.543 55.000 0.37 0.00 45.03 3.60
1582 1650 0.108041 GTTAACCTCCCAATCGGCGA 60.108 55.000 13.87 13.87 0.00 5.54
1666 1742 5.157781 CAATTCATTGCAAAAGCCCAATTG 58.842 37.500 1.71 8.06 29.71 2.32
1674 1750 1.733360 CGCCCCAATTCATTGCAAAAG 59.267 47.619 1.71 0.00 36.48 2.27
1696 1772 5.356470 GTGTCCCTACTGGTACTACTACTTG 59.644 48.000 0.00 0.00 34.77 3.16
1698 1774 4.537688 TGTGTCCCTACTGGTACTACTACT 59.462 45.833 0.00 0.00 34.77 2.57
1699 1775 4.848357 TGTGTCCCTACTGGTACTACTAC 58.152 47.826 0.00 0.00 34.77 2.73
1700 1776 4.784838 TCTGTGTCCCTACTGGTACTACTA 59.215 45.833 0.00 0.00 34.77 1.82
1715 1791 4.192000 CACGGCAGATCTGTGTCC 57.808 61.111 23.38 15.02 45.01 4.02
1752 1830 4.654262 TCCTTAGGCTTTAGGACATGTAGG 59.346 45.833 12.53 0.00 35.66 3.18
1753 1831 5.871396 TCCTTAGGCTTTAGGACATGTAG 57.129 43.478 12.53 0.00 35.66 2.74
1769 1847 8.425577 AACATGAAATTCTGTCGTATCCTTAG 57.574 34.615 0.00 0.00 0.00 2.18
1792 1870 5.743872 ACGCTCTCACATTTTTCAAAAGAAC 59.256 36.000 0.00 0.00 0.00 3.01
1825 1903 5.622007 CGATGCTCTCTCTCTCTCTGTTTTT 60.622 44.000 0.00 0.00 0.00 1.94
1830 1908 2.545526 GACGATGCTCTCTCTCTCTCTG 59.454 54.545 0.00 0.00 0.00 3.35
1832 1910 1.873591 GGACGATGCTCTCTCTCTCTC 59.126 57.143 0.00 0.00 0.00 3.20
1833 1911 1.490490 AGGACGATGCTCTCTCTCTCT 59.510 52.381 0.00 0.00 0.00 3.10
1834 1912 1.873591 GAGGACGATGCTCTCTCTCTC 59.126 57.143 0.00 0.00 31.63 3.20
1835 1913 1.490490 AGAGGACGATGCTCTCTCTCT 59.510 52.381 3.81 0.00 41.57 3.10
1836 1914 1.967319 AGAGGACGATGCTCTCTCTC 58.033 55.000 3.81 0.00 41.57 3.20
1859 1937 3.142951 TGTACACCATGTGTTAACTGCC 58.857 45.455 7.22 0.00 45.08 4.85
1868 1946 9.773328 CTTAATTAAGACAATGTACACCATGTG 57.227 33.333 18.69 3.83 36.15 3.21
1871 1949 9.959721 AGACTTAATTAAGACAATGTACACCAT 57.040 29.630 27.92 3.91 37.08 3.55
1924 2037 0.173708 GACAGACCCGGCTAGTTGAG 59.826 60.000 0.00 0.00 0.00 3.02
1926 2039 0.608640 AAGACAGACCCGGCTAGTTG 59.391 55.000 0.00 0.00 0.00 3.16
1960 2073 1.180029 TGGTGTCTAGTCGGGCTTAC 58.820 55.000 0.00 0.00 0.00 2.34
1984 2097 9.875708 ACTCTATCTCCTGAAGAATACAGTATT 57.124 33.333 5.43 5.43 37.61 1.89
1988 2101 7.040478 CCAGACTCTATCTCCTGAAGAATACAG 60.040 44.444 0.00 0.00 37.61 2.74
2046 2160 2.939103 CCTCCTCAAAACGGCAGAATAG 59.061 50.000 0.00 0.00 0.00 1.73
2069 2183 8.696410 TTATGCCCGAGAAAATTATTGTTTTC 57.304 30.769 4.42 4.42 44.51 2.29
2088 2202 4.770795 AGTTCACCATGACTACTTATGCC 58.229 43.478 0.00 0.00 0.00 4.40
2094 2208 3.441101 TGGCTAGTTCACCATGACTACT 58.559 45.455 0.00 0.00 0.00 2.57
2095 2209 3.430929 CCTGGCTAGTTCACCATGACTAC 60.431 52.174 0.00 0.00 34.82 2.73
2098 2212 2.014068 GCCTGGCTAGTTCACCATGAC 61.014 57.143 12.43 0.00 34.82 3.06
2128 2242 0.675633 ACAAACCTGGCTGTTCATGC 59.324 50.000 0.00 0.00 0.00 4.06
2129 2243 3.017265 GAACAAACCTGGCTGTTCATG 57.983 47.619 25.79 6.81 46.95 3.07
2133 2247 2.616842 CGTAAGAACAAACCTGGCTGTT 59.383 45.455 13.02 13.02 38.46 3.16
2134 2248 2.218603 CGTAAGAACAAACCTGGCTGT 58.781 47.619 0.00 0.00 43.02 4.40
2135 2249 2.032030 CACGTAAGAACAAACCTGGCTG 60.032 50.000 0.00 0.00 43.62 4.85
2136 2250 2.218603 CACGTAAGAACAAACCTGGCT 58.781 47.619 0.00 0.00 43.62 4.75
2137 2251 1.265905 CCACGTAAGAACAAACCTGGC 59.734 52.381 0.00 0.00 43.62 4.85
2138 2252 2.841215 TCCACGTAAGAACAAACCTGG 58.159 47.619 0.00 0.00 43.62 4.45
2139 2253 4.083484 GGAATCCACGTAAGAACAAACCTG 60.083 45.833 0.00 0.00 43.62 4.00
2140 2254 4.070009 GGAATCCACGTAAGAACAAACCT 58.930 43.478 0.00 0.00 43.62 3.50
2141 2255 3.816523 TGGAATCCACGTAAGAACAAACC 59.183 43.478 0.00 0.00 43.62 3.27
2142 2256 4.779987 GTGGAATCCACGTAAGAACAAAC 58.220 43.478 17.46 0.00 44.95 2.93
2206 2320 3.439476 CAGAATCAAGGTTGCTTCTCCTG 59.561 47.826 5.95 0.00 40.50 3.86
2213 2327 5.352569 CGAAGAATACAGAATCAAGGTTGCT 59.647 40.000 0.00 0.00 0.00 3.91
2214 2328 5.447818 CCGAAGAATACAGAATCAAGGTTGC 60.448 44.000 0.00 0.00 0.00 4.17
2215 2329 5.065218 CCCGAAGAATACAGAATCAAGGTTG 59.935 44.000 0.00 0.00 0.00 3.77
2218 2332 3.561725 GCCCGAAGAATACAGAATCAAGG 59.438 47.826 0.00 0.00 0.00 3.61
2221 2335 2.429250 TCGCCCGAAGAATACAGAATCA 59.571 45.455 0.00 0.00 0.00 2.57
2222 2336 2.795470 GTCGCCCGAAGAATACAGAATC 59.205 50.000 0.00 0.00 0.00 2.52
2224 2338 1.546923 TGTCGCCCGAAGAATACAGAA 59.453 47.619 0.00 0.00 0.00 3.02
2237 2351 1.672881 CAATTCCAGATTCTGTCGCCC 59.327 52.381 12.54 0.00 0.00 6.13
2257 2371 1.544724 TATGCTCAAAGGGGCACAAC 58.455 50.000 0.00 0.00 41.39 3.32
2260 2374 1.767759 ACATATGCTCAAAGGGGCAC 58.232 50.000 1.58 0.00 41.39 5.01
2282 2399 4.647611 AGATTTAACGTGGACACCATGAA 58.352 39.130 15.60 1.90 42.73 2.57
2306 2429 3.354089 ACACTGAAATGGAACGCAAAG 57.646 42.857 0.00 0.00 0.00 2.77
2308 2431 5.703592 AGTTATACACTGAAATGGAACGCAA 59.296 36.000 0.00 0.00 32.83 4.85
2335 2458 5.290158 GCACCAACGTCGATTATCTTTCTTA 59.710 40.000 0.00 0.00 0.00 2.10
2338 2461 3.369756 TGCACCAACGTCGATTATCTTTC 59.630 43.478 0.00 0.00 0.00 2.62
2339 2462 3.331150 TGCACCAACGTCGATTATCTTT 58.669 40.909 0.00 0.00 0.00 2.52
2345 2468 1.066858 AGATCTGCACCAACGTCGATT 60.067 47.619 0.00 0.00 0.00 3.34
2346 2469 0.532573 AGATCTGCACCAACGTCGAT 59.467 50.000 0.00 0.00 0.00 3.59
2347 2470 0.388520 CAGATCTGCACCAACGTCGA 60.389 55.000 10.38 0.00 0.00 4.20
2584 2707 5.537295 GGATGGACCATTGATGAATGATGAA 59.463 40.000 8.78 0.00 41.49 2.57
2587 2710 5.069518 TGGATGGACCATTGATGAATGAT 57.930 39.130 8.78 0.00 44.64 2.45
2600 2723 2.061061 AGGAAGGATGATGGATGGACC 58.939 52.381 0.00 0.00 39.54 4.46
2601 2724 2.707791 TCAGGAAGGATGATGGATGGAC 59.292 50.000 0.00 0.00 0.00 4.02
2602 2725 2.707791 GTCAGGAAGGATGATGGATGGA 59.292 50.000 0.00 0.00 0.00 3.41
2603 2726 2.440627 TGTCAGGAAGGATGATGGATGG 59.559 50.000 0.00 0.00 0.00 3.51
2605 2728 3.498121 GCATGTCAGGAAGGATGATGGAT 60.498 47.826 0.00 0.00 0.00 3.41
2606 2729 2.158711 GCATGTCAGGAAGGATGATGGA 60.159 50.000 0.00 0.00 0.00 3.41
2607 2730 2.228059 GCATGTCAGGAAGGATGATGG 58.772 52.381 0.00 0.00 0.00 3.51
2609 2732 3.137728 TCATGCATGTCAGGAAGGATGAT 59.862 43.478 25.43 0.00 34.57 2.45
2650 2775 0.578683 CGATGTACAGGCTGCATTCG 59.421 55.000 15.89 14.05 0.00 3.34
2791 2918 3.470567 CAGTCCGTCTTGACGCGC 61.471 66.667 16.59 0.00 40.26 6.86
3078 3205 0.531532 GATGGACGGCATCAGACCAG 60.532 60.000 0.00 0.00 36.92 4.00
3079 3206 1.264045 TGATGGACGGCATCAGACCA 61.264 55.000 0.00 0.00 37.77 4.02
3080 3207 1.522092 TGATGGACGGCATCAGACC 59.478 57.895 0.00 0.00 34.50 3.85
3089 3216 1.660607 CATGAACGAACTGATGGACGG 59.339 52.381 0.00 0.00 0.00 4.79
3099 3226 1.852895 CTAGGCTACGCATGAACGAAC 59.147 52.381 0.00 0.00 36.70 3.95
3116 3243 2.406130 CGTACTCTCTCTACCGCCTAG 58.594 57.143 0.00 0.00 0.00 3.02
3156 3283 1.483004 CAAATCCAATCCCTGCATGCA 59.517 47.619 21.29 21.29 0.00 3.96
3157 3284 1.808891 GCAAATCCAATCCCTGCATGC 60.809 52.381 11.82 11.82 33.19 4.06
3158 3285 1.760613 AGCAAATCCAATCCCTGCATG 59.239 47.619 0.00 0.00 35.44 4.06
3159 3286 1.760613 CAGCAAATCCAATCCCTGCAT 59.239 47.619 0.00 0.00 35.44 3.96
3182 3309 2.024176 TCCGCTCTTTACATTCTGCC 57.976 50.000 0.00 0.00 0.00 4.85
3199 3326 3.920412 GCTCCGATCATTTGTGTTTTTCC 59.080 43.478 0.00 0.00 0.00 3.13
3200 3327 3.603770 CGCTCCGATCATTTGTGTTTTTC 59.396 43.478 0.00 0.00 0.00 2.29
3201 3328 3.564511 CGCTCCGATCATTTGTGTTTTT 58.435 40.909 0.00 0.00 0.00 1.94
3202 3329 2.668279 GCGCTCCGATCATTTGTGTTTT 60.668 45.455 0.00 0.00 0.00 2.43
3203 3330 1.135689 GCGCTCCGATCATTTGTGTTT 60.136 47.619 0.00 0.00 0.00 2.83
3204 3331 0.447801 GCGCTCCGATCATTTGTGTT 59.552 50.000 0.00 0.00 0.00 3.32
3205 3332 0.391661 AGCGCTCCGATCATTTGTGT 60.392 50.000 2.64 0.00 0.00 3.72
3206 3333 0.729116 AAGCGCTCCGATCATTTGTG 59.271 50.000 12.06 0.00 0.00 3.33
3207 3334 1.131126 CAAAGCGCTCCGATCATTTGT 59.869 47.619 12.06 0.00 0.00 2.83
3208 3335 1.131126 ACAAAGCGCTCCGATCATTTG 59.869 47.619 12.06 11.73 34.61 2.32
3209 3336 1.453155 ACAAAGCGCTCCGATCATTT 58.547 45.000 12.06 0.00 0.00 2.32
3210 3337 1.453155 AACAAAGCGCTCCGATCATT 58.547 45.000 12.06 0.00 0.00 2.57
3211 3338 1.398390 GAAACAAAGCGCTCCGATCAT 59.602 47.619 12.06 0.00 0.00 2.45
3212 3339 0.796312 GAAACAAAGCGCTCCGATCA 59.204 50.000 12.06 0.00 0.00 2.92
3213 3340 1.061276 GAGAAACAAAGCGCTCCGATC 59.939 52.381 12.06 6.21 0.00 3.69
3214 3341 1.079503 GAGAAACAAAGCGCTCCGAT 58.920 50.000 12.06 0.00 0.00 4.18
3215 3342 0.949105 GGAGAAACAAAGCGCTCCGA 60.949 55.000 12.06 0.00 37.75 4.55
3216 3343 1.497722 GGAGAAACAAAGCGCTCCG 59.502 57.895 12.06 7.55 37.75 4.63
3217 3344 0.799393 GAGGAGAAACAAAGCGCTCC 59.201 55.000 12.06 4.92 45.70 4.70
3218 3345 0.440371 CGAGGAGAAACAAAGCGCTC 59.560 55.000 12.06 0.00 0.00 5.03
3219 3346 0.249911 ACGAGGAGAAACAAAGCGCT 60.250 50.000 2.64 2.64 0.00 5.92
3220 3347 0.586802 AACGAGGAGAAACAAAGCGC 59.413 50.000 0.00 0.00 0.00 5.92
3221 3348 1.136611 CGAACGAGGAGAAACAAAGCG 60.137 52.381 0.00 0.00 0.00 4.68
3222 3349 2.132762 TCGAACGAGGAGAAACAAAGC 58.867 47.619 0.00 0.00 0.00 3.51
3223 3350 3.987868 TCATCGAACGAGGAGAAACAAAG 59.012 43.478 7.45 0.00 31.03 2.77
3224 3351 3.985008 TCATCGAACGAGGAGAAACAAA 58.015 40.909 7.45 0.00 31.03 2.83
3225 3352 3.653539 TCATCGAACGAGGAGAAACAA 57.346 42.857 7.45 0.00 31.03 2.83
3232 3359 2.288825 ACAAAAGCTCATCGAACGAGGA 60.289 45.455 14.89 10.81 33.71 3.71
3233 3360 2.069273 ACAAAAGCTCATCGAACGAGG 58.931 47.619 14.89 2.48 0.00 4.63
3234 3361 2.476619 ACACAAAAGCTCATCGAACGAG 59.523 45.455 10.14 10.14 0.00 4.18
3235 3362 2.479837 ACACAAAAGCTCATCGAACGA 58.520 42.857 0.00 0.00 0.00 3.85
3236 3363 2.949714 ACACAAAAGCTCATCGAACG 57.050 45.000 0.00 0.00 0.00 3.95
3237 3364 4.712763 CCTAACACAAAAGCTCATCGAAC 58.287 43.478 0.00 0.00 0.00 3.95
3238 3365 3.188460 GCCTAACACAAAAGCTCATCGAA 59.812 43.478 0.00 0.00 0.00 3.71
3239 3366 2.742053 GCCTAACACAAAAGCTCATCGA 59.258 45.455 0.00 0.00 0.00 3.59
3240 3367 2.474526 CGCCTAACACAAAAGCTCATCG 60.475 50.000 0.00 0.00 0.00 3.84
3241 3368 2.729156 GCGCCTAACACAAAAGCTCATC 60.729 50.000 0.00 0.00 0.00 2.92
3242 3369 1.200020 GCGCCTAACACAAAAGCTCAT 59.800 47.619 0.00 0.00 0.00 2.90
3243 3370 0.591170 GCGCCTAACACAAAAGCTCA 59.409 50.000 0.00 0.00 0.00 4.26
3244 3371 0.875059 AGCGCCTAACACAAAAGCTC 59.125 50.000 2.29 0.00 0.00 4.09
3245 3372 1.266989 GAAGCGCCTAACACAAAAGCT 59.733 47.619 2.29 0.00 34.70 3.74
3246 3373 1.001815 TGAAGCGCCTAACACAAAAGC 60.002 47.619 2.29 0.00 0.00 3.51
3247 3374 3.347958 TTGAAGCGCCTAACACAAAAG 57.652 42.857 2.29 0.00 0.00 2.27
3248 3375 3.784701 TTTGAAGCGCCTAACACAAAA 57.215 38.095 2.29 0.00 0.00 2.44
3249 3376 3.608241 CGATTTGAAGCGCCTAACACAAA 60.608 43.478 2.29 8.58 0.00 2.83
3250 3377 2.095969 CGATTTGAAGCGCCTAACACAA 60.096 45.455 2.29 0.00 0.00 3.33
3251 3378 1.463056 CGATTTGAAGCGCCTAACACA 59.537 47.619 2.29 0.00 0.00 3.72
3252 3379 1.730064 TCGATTTGAAGCGCCTAACAC 59.270 47.619 2.29 0.00 37.78 3.32
3253 3380 2.087501 TCGATTTGAAGCGCCTAACA 57.912 45.000 2.29 0.00 37.78 2.41
3254 3381 3.675467 AATCGATTTGAAGCGCCTAAC 57.325 42.857 4.39 0.00 37.78 2.34
3255 3382 5.353123 ACTTAAATCGATTTGAAGCGCCTAA 59.647 36.000 29.20 13.49 37.78 2.69
3256 3383 4.873827 ACTTAAATCGATTTGAAGCGCCTA 59.126 37.500 29.20 6.85 37.78 3.93
3257 3384 3.689649 ACTTAAATCGATTTGAAGCGCCT 59.310 39.130 29.20 11.97 37.78 5.52
3258 3385 4.016113 ACTTAAATCGATTTGAAGCGCC 57.984 40.909 29.20 0.00 37.78 6.53
3259 3386 5.795441 AGAAACTTAAATCGATTTGAAGCGC 59.205 36.000 29.20 18.71 37.78 5.92
3260 3387 7.781763 AAGAAACTTAAATCGATTTGAAGCG 57.218 32.000 29.20 14.34 39.51 4.68
3350 3479 1.330655 ATGCCTCCCGACGAGATTGT 61.331 55.000 0.00 0.00 41.63 2.71
3402 3531 3.629398 CCATACTCTTGCTCAAATGGGAC 59.371 47.826 4.06 0.00 32.07 4.46
3444 3573 8.316497 GAGGATCCATATAATCAAGATCAGGA 57.684 38.462 15.82 0.00 36.00 3.86
3477 3606 2.295909 GAGATCAGATCGCTACTGGCTT 59.704 50.000 6.89 0.00 39.13 4.35
3525 3654 1.562942 TCTCAGCATCTGGGCAAGATT 59.437 47.619 0.29 0.00 43.52 2.40
3570 3699 0.693049 GGACATTGTGGTGGAGACCT 59.307 55.000 0.00 0.00 43.58 3.85
3593 3722 7.875327 TTATTTTAGCCCTCAATTGGACTAC 57.125 36.000 5.42 0.00 0.00 2.73
3610 3739 9.748708 GCAGCAATTCATGAAGGTATTATTTTA 57.251 29.630 14.54 0.00 0.00 1.52
3654 3783 1.686052 GTTTTGGGAACTGCATGGACA 59.314 47.619 0.00 0.00 0.00 4.02
3816 3948 4.999950 CCATATGGAAGCAGAAGGTCATAC 59.000 45.833 17.49 0.00 37.39 2.39
3821 3953 1.133668 GCCCATATGGAAGCAGAAGGT 60.134 52.381 24.00 0.00 37.39 3.50
3878 4010 0.469917 CAATACCCTGATGCGGACCT 59.530 55.000 0.00 0.00 0.00 3.85
3952 4084 2.495669 CCATAAACCAGCGGTTCCAATT 59.504 45.455 12.33 1.38 46.20 2.32
4032 4164 1.423921 AGAAACGGAGTGTTCCCCAAT 59.576 47.619 0.00 0.00 45.00 3.16
4035 4167 0.395312 TGAGAAACGGAGTGTTCCCC 59.605 55.000 0.00 0.00 45.00 4.81
4043 4176 2.497675 TCCATCTCCTTGAGAAACGGAG 59.502 50.000 0.00 0.00 42.27 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.