Multiple sequence alignment - TraesCS7A01G422300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G422300 chr7A 100.000 3104 0 0 1 3104 612977597 612974494 0.000000e+00 5733.0
1 TraesCS7A01G422300 chr7A 77.684 354 59 11 1129 1475 659429205 659428865 6.790000e-47 198.0
2 TraesCS7A01G422300 chr7A 80.864 162 27 4 869 1029 90363102 90363260 1.170000e-24 124.0
3 TraesCS7A01G422300 chr7A 90.323 62 6 0 315 376 176676494 176676555 7.130000e-12 82.4
4 TraesCS7A01G422300 chr7D 95.342 1288 55 2 1030 2317 532876073 532874791 0.000000e+00 2041.0
5 TraesCS7A01G422300 chr7D 83.130 575 79 9 121 680 532877204 532876633 2.760000e-140 508.0
6 TraesCS7A01G422300 chr7D 86.525 423 49 5 1 418 533389580 533389161 2.820000e-125 459.0
7 TraesCS7A01G422300 chr7D 81.818 341 45 14 2358 2692 532874785 532874456 1.420000e-68 270.0
8 TraesCS7A01G422300 chr7D 89.623 106 9 2 2775 2880 532873446 532873343 1.940000e-27 134.0
9 TraesCS7A01G422300 chr7D 100.000 57 0 0 3048 3104 26561765 26561709 4.230000e-19 106.0
10 TraesCS7A01G422300 chr7D 91.304 69 6 0 2956 3024 532873340 532873272 9.160000e-16 95.3
11 TraesCS7A01G422300 chr7B 94.808 886 43 2 1429 2314 573133448 573132566 0.000000e+00 1378.0
12 TraesCS7A01G422300 chr7B 96.787 249 7 1 1063 1311 573140586 573140339 6.190000e-112 414.0
13 TraesCS7A01G422300 chr7B 88.845 251 23 4 2769 3017 573131782 573131535 1.400000e-78 303.0
14 TraesCS7A01G422300 chr7B 96.800 125 4 0 1307 1431 573135087 573134963 3.140000e-50 209.0
15 TraesCS7A01G422300 chr7B 92.045 88 6 1 2617 2703 573132132 573132045 4.200000e-24 122.0
16 TraesCS7A01G422300 chr4A 78.281 861 152 23 1236 2074 16958952 16958105 3.550000e-144 521.0
17 TraesCS7A01G422300 chr4A 82.500 160 27 1 875 1034 57368198 57368040 4.170000e-29 139.0
18 TraesCS7A01G422300 chr4D 77.752 863 159 21 1233 2074 450016336 450017186 1.660000e-137 499.0
19 TraesCS7A01G422300 chr3B 73.090 903 181 40 1124 2016 807358053 807357203 6.600000e-67 265.0
20 TraesCS7A01G422300 chr3B 93.651 63 3 1 3043 3104 603212363 603212425 3.300000e-15 93.5
21 TraesCS7A01G422300 chr3B 94.444 36 2 0 2566 2601 54291582 54291617 4.320000e-04 56.5
22 TraesCS7A01G422300 chr3D 73.031 838 176 36 1124 1951 600179458 600178661 1.850000e-62 250.0
23 TraesCS7A01G422300 chr3D 94.393 107 6 0 747 853 577412818 577412924 6.890000e-37 165.0
24 TraesCS7A01G422300 chr3D 78.537 205 38 6 2566 2767 185228721 185228922 2.510000e-26 130.0
25 TraesCS7A01G422300 chr3D 92.647 68 2 3 3037 3104 595079700 595079636 9.160000e-16 95.3
26 TraesCS7A01G422300 chr6A 89.024 164 17 1 869 1031 551533945 551533782 5.250000e-48 202.0
27 TraesCS7A01G422300 chr6A 87.952 166 18 2 869 1034 117126379 117126542 8.780000e-46 195.0
28 TraesCS7A01G422300 chr6A 95.238 63 2 1 3042 3104 216075501 216075562 7.080000e-17 99.0
29 TraesCS7A01G422300 chr1A 93.496 123 8 0 747 869 85900645 85900767 1.900000e-42 183.0
30 TraesCS7A01G422300 chr1A 75.245 408 83 14 2572 2974 543058525 543058131 8.850000e-41 178.0
31 TraesCS7A01G422300 chr1A 84.615 156 22 2 875 1030 506851541 506851388 1.490000e-33 154.0
32 TraesCS7A01G422300 chr1A 82.530 166 29 0 869 1034 17747159 17747324 2.490000e-31 147.0
33 TraesCS7A01G422300 chr5A 87.179 156 20 0 876 1031 523805786 523805941 8.850000e-41 178.0
34 TraesCS7A01G422300 chr5A 81.098 164 28 3 869 1030 648949148 648949310 9.040000e-26 128.0
35 TraesCS7A01G422300 chr5A 90.000 60 5 1 320 379 12550756 12550698 3.320000e-10 76.8
36 TraesCS7A01G422300 chr2A 91.803 122 10 0 747 868 80891209 80891088 1.480000e-38 171.0
37 TraesCS7A01G422300 chr2A 79.333 150 26 4 301 446 739924871 739924723 1.970000e-17 100.0
38 TraesCS7A01G422300 chr2D 75.472 318 73 4 51 367 72997396 72997709 1.930000e-32 150.0
39 TraesCS7A01G422300 chr2D 96.721 61 1 1 3044 3104 71954037 71954096 1.970000e-17 100.0
40 TraesCS7A01G422300 chr2D 100.000 53 0 0 3052 3104 355319577 355319525 7.080000e-17 99.0
41 TraesCS7A01G422300 chr2D 100.000 53 0 0 3052 3104 531176919 531176971 7.080000e-17 99.0
42 TraesCS7A01G422300 chr4B 83.030 165 25 3 869 1031 227105209 227105372 2.490000e-31 147.0
43 TraesCS7A01G422300 chr4B 79.245 106 22 0 271 376 75777417 75777312 1.190000e-09 75.0
44 TraesCS7A01G422300 chr6D 94.203 69 2 2 3036 3104 34337840 34337906 1.520000e-18 104.0
45 TraesCS7A01G422300 chr5D 91.045 67 4 2 3038 3104 484404568 484404632 4.260000e-14 89.8
46 TraesCS7A01G422300 chr1B 87.671 73 9 0 306 378 454375120 454375048 5.520000e-13 86.1
47 TraesCS7A01G422300 chr1B 92.308 39 3 0 2564 2602 171185745 171185707 4.320000e-04 56.5
48 TraesCS7A01G422300 chr3A 88.235 68 8 0 307 374 528513157 528513090 7.130000e-12 82.4
49 TraesCS7A01G422300 chr5B 90.566 53 5 0 324 376 304123778 304123726 1.540000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G422300 chr7A 612974494 612977597 3103 True 5733.00 5733 100.0000 1 3104 1 chr7A.!!$R1 3103
1 TraesCS7A01G422300 chr7D 532873272 532877204 3932 True 609.66 2041 88.2434 121 3024 5 chr7D.!!$R3 2903
2 TraesCS7A01G422300 chr7B 573131535 573135087 3552 True 503.00 1378 93.1245 1307 3017 4 chr7B.!!$R2 1710
3 TraesCS7A01G422300 chr4A 16958105 16958952 847 True 521.00 521 78.2810 1236 2074 1 chr4A.!!$R1 838
4 TraesCS7A01G422300 chr4D 450016336 450017186 850 False 499.00 499 77.7520 1233 2074 1 chr4D.!!$F1 841
5 TraesCS7A01G422300 chr3B 807357203 807358053 850 True 265.00 265 73.0900 1124 2016 1 chr3B.!!$R1 892
6 TraesCS7A01G422300 chr3D 600178661 600179458 797 True 250.00 250 73.0310 1124 1951 1 chr3D.!!$R2 827

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
305 306 0.036306 CCGGGTAGTCTTGGCTTTGT 59.964 55.0 0.0 0.0 0.00 2.83 F
536 542 0.037326 TCCTGCTACCTCTTGTTGCG 60.037 55.0 0.0 0.0 46.89 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1662 3493 2.471815 TGTACCCCTCGATCCTCATT 57.528 50.0 0.00 0.00 0.0 2.57 R
2347 4181 0.043334 AGGGGATGCAGTAGTCCACT 59.957 55.0 2.82 2.82 43.4 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.241317 CAACCAAAAGATATATCAGTTCAATGC 57.759 33.333 15.08 0.00 0.00 3.56
33 34 8.757982 ACCAAAAGATATATCAGTTCAATGCT 57.242 30.769 15.08 0.00 0.00 3.79
34 35 9.851686 ACCAAAAGATATATCAGTTCAATGCTA 57.148 29.630 15.08 0.00 0.00 3.49
44 45 9.941325 ATATCAGTTCAATGCTAGATAGGAAAG 57.059 33.333 0.00 0.00 0.00 2.62
45 46 6.586344 TCAGTTCAATGCTAGATAGGAAAGG 58.414 40.000 0.00 0.00 0.00 3.11
46 47 5.762218 CAGTTCAATGCTAGATAGGAAAGGG 59.238 44.000 0.00 0.00 0.00 3.95
47 48 5.430089 AGTTCAATGCTAGATAGGAAAGGGT 59.570 40.000 0.00 0.00 0.00 4.34
48 49 6.615726 AGTTCAATGCTAGATAGGAAAGGGTA 59.384 38.462 0.00 0.00 0.00 3.69
49 50 7.127339 AGTTCAATGCTAGATAGGAAAGGGTAA 59.873 37.037 0.00 0.00 0.00 2.85
50 51 7.067496 TCAATGCTAGATAGGAAAGGGTAAG 57.933 40.000 0.00 0.00 0.00 2.34
51 52 6.844388 TCAATGCTAGATAGGAAAGGGTAAGA 59.156 38.462 0.00 0.00 0.00 2.10
52 53 7.347222 TCAATGCTAGATAGGAAAGGGTAAGAA 59.653 37.037 0.00 0.00 0.00 2.52
53 54 7.691993 ATGCTAGATAGGAAAGGGTAAGAAA 57.308 36.000 0.00 0.00 0.00 2.52
54 55 7.691993 TGCTAGATAGGAAAGGGTAAGAAAT 57.308 36.000 0.00 0.00 0.00 2.17
55 56 7.509546 TGCTAGATAGGAAAGGGTAAGAAATG 58.490 38.462 0.00 0.00 0.00 2.32
56 57 7.347222 TGCTAGATAGGAAAGGGTAAGAAATGA 59.653 37.037 0.00 0.00 0.00 2.57
57 58 7.658167 GCTAGATAGGAAAGGGTAAGAAATGAC 59.342 40.741 0.00 0.00 0.00 3.06
58 59 7.757242 AGATAGGAAAGGGTAAGAAATGACT 57.243 36.000 0.00 0.00 0.00 3.41
59 60 8.855804 AGATAGGAAAGGGTAAGAAATGACTA 57.144 34.615 0.00 0.00 0.00 2.59
60 61 8.929487 AGATAGGAAAGGGTAAGAAATGACTAG 58.071 37.037 0.00 0.00 0.00 2.57
61 62 8.855804 ATAGGAAAGGGTAAGAAATGACTAGA 57.144 34.615 0.00 0.00 0.00 2.43
62 63 7.757242 AGGAAAGGGTAAGAAATGACTAGAT 57.243 36.000 0.00 0.00 0.00 1.98
63 64 8.164057 AGGAAAGGGTAAGAAATGACTAGATT 57.836 34.615 0.00 0.00 0.00 2.40
64 65 8.268605 AGGAAAGGGTAAGAAATGACTAGATTC 58.731 37.037 0.00 0.00 0.00 2.52
65 66 8.047310 GGAAAGGGTAAGAAATGACTAGATTCA 58.953 37.037 0.00 0.00 0.00 2.57
66 67 9.620259 GAAAGGGTAAGAAATGACTAGATTCAT 57.380 33.333 0.00 0.00 37.87 2.57
69 70 9.440761 AGGGTAAGAAATGACTAGATTCATACT 57.559 33.333 0.00 0.00 35.02 2.12
98 99 9.720769 AAAACTAAAGATAAACGAAGATGGAGA 57.279 29.630 0.00 0.00 0.00 3.71
99 100 9.720769 AAACTAAAGATAAACGAAGATGGAGAA 57.279 29.630 0.00 0.00 0.00 2.87
100 101 8.934507 ACTAAAGATAAACGAAGATGGAGAAG 57.065 34.615 0.00 0.00 0.00 2.85
101 102 7.982354 ACTAAAGATAAACGAAGATGGAGAAGG 59.018 37.037 0.00 0.00 0.00 3.46
102 103 6.546428 AAGATAAACGAAGATGGAGAAGGA 57.454 37.500 0.00 0.00 0.00 3.36
103 104 5.908341 AGATAAACGAAGATGGAGAAGGAC 58.092 41.667 0.00 0.00 0.00 3.85
104 105 2.656560 AACGAAGATGGAGAAGGACG 57.343 50.000 0.00 0.00 0.00 4.79
105 106 0.818296 ACGAAGATGGAGAAGGACGG 59.182 55.000 0.00 0.00 0.00 4.79
106 107 1.103803 CGAAGATGGAGAAGGACGGA 58.896 55.000 0.00 0.00 0.00 4.69
107 108 1.066303 CGAAGATGGAGAAGGACGGAG 59.934 57.143 0.00 0.00 0.00 4.63
108 109 1.410882 GAAGATGGAGAAGGACGGAGG 59.589 57.143 0.00 0.00 0.00 4.30
109 110 0.631753 AGATGGAGAAGGACGGAGGA 59.368 55.000 0.00 0.00 0.00 3.71
110 111 1.007238 AGATGGAGAAGGACGGAGGAA 59.993 52.381 0.00 0.00 0.00 3.36
111 112 1.831736 GATGGAGAAGGACGGAGGAAA 59.168 52.381 0.00 0.00 0.00 3.13
112 113 1.952621 TGGAGAAGGACGGAGGAAAT 58.047 50.000 0.00 0.00 0.00 2.17
113 114 1.831736 TGGAGAAGGACGGAGGAAATC 59.168 52.381 0.00 0.00 0.00 2.17
114 115 1.831736 GGAGAAGGACGGAGGAAATCA 59.168 52.381 0.00 0.00 0.00 2.57
115 116 2.418884 GGAGAAGGACGGAGGAAATCAC 60.419 54.545 0.00 0.00 0.00 3.06
116 117 2.498078 GAGAAGGACGGAGGAAATCACT 59.502 50.000 0.00 0.00 0.00 3.41
117 118 3.700038 GAGAAGGACGGAGGAAATCACTA 59.300 47.826 0.00 0.00 0.00 2.74
118 119 4.290942 AGAAGGACGGAGGAAATCACTAT 58.709 43.478 0.00 0.00 0.00 2.12
119 120 4.717280 AGAAGGACGGAGGAAATCACTATT 59.283 41.667 0.00 0.00 0.00 1.73
143 144 1.608154 GCTGACCCCTTCCCCTTAC 59.392 63.158 0.00 0.00 0.00 2.34
149 150 1.494716 CCCCTTCCCCTTACGGTTGT 61.495 60.000 0.00 0.00 0.00 3.32
150 151 0.402887 CCCTTCCCCTTACGGTTGTT 59.597 55.000 0.00 0.00 0.00 2.83
164 165 1.064357 GGTTGTTGGTGTGGTTGTACG 59.936 52.381 0.00 0.00 0.00 3.67
180 181 2.048597 CGCCTTCGTGCAGGTGTA 60.049 61.111 6.26 0.00 39.33 2.90
182 183 1.741770 GCCTTCGTGCAGGTGTAGG 60.742 63.158 6.26 12.20 36.15 3.18
183 184 1.741770 CCTTCGTGCAGGTGTAGGC 60.742 63.158 6.26 0.00 0.00 3.93
184 185 1.005037 CTTCGTGCAGGTGTAGGCA 60.005 57.895 6.26 0.00 37.77 4.75
185 186 1.005037 TTCGTGCAGGTGTAGGCAG 60.005 57.895 6.26 0.00 41.35 4.85
186 187 1.754380 TTCGTGCAGGTGTAGGCAGT 61.754 55.000 6.26 0.00 41.35 4.40
208 209 0.980231 GAGGGGTGCAGTCATCCTCT 60.980 60.000 11.29 3.40 43.21 3.69
245 246 0.039617 CTCGTCCGAGGAGATGATGC 60.040 60.000 11.93 0.00 38.51 3.91
246 247 1.006805 CGTCCGAGGAGATGATGCC 60.007 63.158 0.00 0.00 0.00 4.40
254 255 0.389166 GGAGATGATGCCGACGATCC 60.389 60.000 0.00 0.00 0.00 3.36
263 264 4.586472 CGACGATCCGACGGACCG 62.586 72.222 28.88 28.88 45.71 4.79
268 269 4.430765 ATCCGACGGACCGCACAC 62.431 66.667 21.02 2.32 32.98 3.82
281 282 3.059982 CACACGCCTCCTCCTTCA 58.940 61.111 0.00 0.00 0.00 3.02
287 288 2.993853 CCTCCTCCTTCACCAGCC 59.006 66.667 0.00 0.00 0.00 4.85
290 291 4.101448 CCTCCTTCACCAGCCGGG 62.101 72.222 2.18 0.00 44.81 5.73
305 306 0.036306 CCGGGTAGTCTTGGCTTTGT 59.964 55.000 0.00 0.00 0.00 2.83
307 308 1.822506 GGGTAGTCTTGGCTTTGTCC 58.177 55.000 0.00 0.00 0.00 4.02
309 310 0.796927 GTAGTCTTGGCTTTGTCCGC 59.203 55.000 0.00 0.00 0.00 5.54
310 311 0.685097 TAGTCTTGGCTTTGTCCGCT 59.315 50.000 0.00 0.00 0.00 5.52
318 319 1.589716 GCTTTGTCCGCTGCATCCTT 61.590 55.000 0.00 0.00 0.00 3.36
320 321 1.298157 TTTGTCCGCTGCATCCTTCG 61.298 55.000 0.00 0.00 0.00 3.79
323 324 3.257561 CCGCTGCATCCTTCGTCG 61.258 66.667 0.00 0.00 0.00 5.12
365 366 2.125912 CGAGTCGGAGTGCCTTGG 60.126 66.667 4.10 0.00 0.00 3.61
401 406 2.124109 TGCGTTGGGTCTTTGCCA 60.124 55.556 0.00 0.00 0.00 4.92
425 430 4.933064 GCGAGCGATGGAGGACCG 62.933 72.222 0.00 0.00 39.42 4.79
426 431 3.518998 CGAGCGATGGAGGACCGT 61.519 66.667 0.00 0.00 39.42 4.83
427 432 2.413765 GAGCGATGGAGGACCGTC 59.586 66.667 0.00 0.00 45.79 4.79
446 451 2.962569 CGAGGAGCTGGTCGTTCA 59.037 61.111 3.41 0.00 0.00 3.18
461 466 0.109873 GTTCAGATCGACCGACGTGT 60.110 55.000 0.00 0.00 43.13 4.49
492 497 2.115291 GGCGGGAGGACATTGCTTC 61.115 63.158 0.00 0.00 0.00 3.86
519 525 3.223589 GCCGCTCTCTCCCTCTCC 61.224 72.222 0.00 0.00 0.00 3.71
524 530 0.184933 GCTCTCTCCCTCTCCTGCTA 59.815 60.000 0.00 0.00 0.00 3.49
530 536 1.011595 TCCCTCTCCTGCTACCTCTT 58.988 55.000 0.00 0.00 0.00 2.85
532 538 1.621072 CCCTCTCCTGCTACCTCTTGT 60.621 57.143 0.00 0.00 0.00 3.16
536 542 0.037326 TCCTGCTACCTCTTGTTGCG 60.037 55.000 0.00 0.00 46.89 4.85
559 565 2.654085 CGCGCGCCTTAGATTCGA 60.654 61.111 27.72 0.00 0.00 3.71
593 599 3.425713 CAACGCTGACGCAGGCAT 61.426 61.111 8.57 0.00 45.53 4.40
612 618 1.114627 TGAGGATCCATCAGTGGTCG 58.885 55.000 15.82 0.00 46.16 4.79
638 652 1.042003 CCAGCAGGAGCAGCTAGAGA 61.042 60.000 0.00 0.00 45.49 3.10
645 659 0.389025 GAGCAGCTAGAGAAGGGCTC 59.611 60.000 0.00 3.05 44.29 4.70
663 677 2.764128 GGAGAGGGGCACGATGGA 60.764 66.667 0.00 0.00 0.00 3.41
676 690 2.283676 ATGGACGGACGACTGGGT 60.284 61.111 0.00 0.00 0.00 4.51
682 696 4.016706 GGACGACTGGGTGGGGTG 62.017 72.222 0.00 0.00 0.00 4.61
684 698 2.770904 ACGACTGGGTGGGGTGTT 60.771 61.111 0.00 0.00 0.00 3.32
685 699 2.032071 CGACTGGGTGGGGTGTTC 59.968 66.667 0.00 0.00 0.00 3.18
686 700 2.516888 CGACTGGGTGGGGTGTTCT 61.517 63.158 0.00 0.00 0.00 3.01
688 702 2.282462 CTGGGTGGGGTGTTCTGC 60.282 66.667 0.00 0.00 0.00 4.26
718 732 1.576356 GCGCAGAGCTAGCAAATAGT 58.424 50.000 18.83 0.00 44.04 2.12
719 733 1.936547 GCGCAGAGCTAGCAAATAGTT 59.063 47.619 18.83 0.00 44.04 2.24
720 734 2.033322 GCGCAGAGCTAGCAAATAGTTC 60.033 50.000 18.83 3.45 44.04 3.01
721 735 3.190079 CGCAGAGCTAGCAAATAGTTCA 58.810 45.455 18.83 0.00 42.53 3.18
722 736 3.806521 CGCAGAGCTAGCAAATAGTTCAT 59.193 43.478 18.83 0.00 42.53 2.57
723 737 4.984785 CGCAGAGCTAGCAAATAGTTCATA 59.015 41.667 18.83 0.00 42.53 2.15
724 738 5.118357 CGCAGAGCTAGCAAATAGTTCATAG 59.882 44.000 18.83 0.00 42.53 2.23
726 740 5.407995 CAGAGCTAGCAAATAGTTCATAGCC 59.592 44.000 18.83 5.07 42.53 3.93
728 742 5.934781 AGCTAGCAAATAGTTCATAGCCTT 58.065 37.500 18.83 0.00 37.03 4.35
730 744 5.994668 GCTAGCAAATAGTTCATAGCCTTCT 59.005 40.000 10.63 0.00 33.65 2.85
732 746 5.372373 AGCAAATAGTTCATAGCCTTCTCC 58.628 41.667 0.00 0.00 0.00 3.71
735 749 6.360618 CAAATAGTTCATAGCCTTCTCCCTT 58.639 40.000 0.00 0.00 0.00 3.95
736 750 6.582929 AATAGTTCATAGCCTTCTCCCTTT 57.417 37.500 0.00 0.00 0.00 3.11
737 751 4.227864 AGTTCATAGCCTTCTCCCTTTG 57.772 45.455 0.00 0.00 0.00 2.77
740 754 2.505819 TCATAGCCTTCTCCCTTTGTCC 59.494 50.000 0.00 0.00 0.00 4.02
742 756 0.476611 AGCCTTCTCCCTTTGTCCCT 60.477 55.000 0.00 0.00 0.00 4.20
743 757 0.405973 GCCTTCTCCCTTTGTCCCTT 59.594 55.000 0.00 0.00 0.00 3.95
745 759 1.425448 CCTTCTCCCTTTGTCCCTTGT 59.575 52.381 0.00 0.00 0.00 3.16
746 760 2.158460 CCTTCTCCCTTTGTCCCTTGTT 60.158 50.000 0.00 0.00 0.00 2.83
747 761 3.073946 CCTTCTCCCTTTGTCCCTTGTTA 59.926 47.826 0.00 0.00 0.00 2.41
748 762 4.263949 CCTTCTCCCTTTGTCCCTTGTTAT 60.264 45.833 0.00 0.00 0.00 1.89
751 765 2.640826 TCCCTTTGTCCCTTGTTATCGT 59.359 45.455 0.00 0.00 0.00 3.73
752 766 3.839490 TCCCTTTGTCCCTTGTTATCGTA 59.161 43.478 0.00 0.00 0.00 3.43
756 770 4.730949 TTGTCCCTTGTTATCGTAGGAG 57.269 45.455 0.00 0.00 0.00 3.69
757 771 3.972133 TGTCCCTTGTTATCGTAGGAGA 58.028 45.455 0.00 0.00 0.00 3.71
758 772 4.346730 TGTCCCTTGTTATCGTAGGAGAA 58.653 43.478 0.00 0.00 0.00 2.87
759 773 4.401519 TGTCCCTTGTTATCGTAGGAGAAG 59.598 45.833 0.00 0.00 0.00 2.85
761 775 3.492829 CCCTTGTTATCGTAGGAGAAGGC 60.493 52.174 0.00 0.00 0.00 4.35
762 776 3.385111 CCTTGTTATCGTAGGAGAAGGCT 59.615 47.826 0.00 0.00 0.00 4.58
763 777 4.583489 CCTTGTTATCGTAGGAGAAGGCTA 59.417 45.833 0.00 0.00 0.00 3.93
764 778 5.244178 CCTTGTTATCGTAGGAGAAGGCTAT 59.756 44.000 0.00 0.00 0.00 2.97
766 780 5.382616 TGTTATCGTAGGAGAAGGCTATGA 58.617 41.667 0.00 0.00 0.00 2.15
767 781 5.831525 TGTTATCGTAGGAGAAGGCTATGAA 59.168 40.000 0.00 0.00 0.00 2.57
768 782 4.857509 ATCGTAGGAGAAGGCTATGAAC 57.142 45.455 0.00 0.00 0.00 3.18
769 783 3.899726 TCGTAGGAGAAGGCTATGAACT 58.100 45.455 0.00 0.00 0.00 3.01
770 784 5.045012 TCGTAGGAGAAGGCTATGAACTA 57.955 43.478 0.00 0.00 0.00 2.24
771 785 5.632118 TCGTAGGAGAAGGCTATGAACTAT 58.368 41.667 0.00 0.00 0.00 2.12
773 787 5.106078 CGTAGGAGAAGGCTATGAACTATCC 60.106 48.000 0.00 0.00 0.00 2.59
774 788 4.820775 AGGAGAAGGCTATGAACTATCCA 58.179 43.478 0.00 0.00 0.00 3.41
775 789 5.410602 AGGAGAAGGCTATGAACTATCCAT 58.589 41.667 0.00 0.00 0.00 3.41
776 790 5.248020 AGGAGAAGGCTATGAACTATCCATG 59.752 44.000 0.00 0.00 0.00 3.66
777 791 4.904241 AGAAGGCTATGAACTATCCATGC 58.096 43.478 0.00 0.00 0.00 4.06
778 792 4.349048 AGAAGGCTATGAACTATCCATGCA 59.651 41.667 0.00 0.00 0.00 3.96
779 793 4.013267 AGGCTATGAACTATCCATGCAC 57.987 45.455 0.00 0.00 0.00 4.57
781 795 4.840680 AGGCTATGAACTATCCATGCACTA 59.159 41.667 0.00 0.00 0.00 2.74
782 796 5.486775 AGGCTATGAACTATCCATGCACTAT 59.513 40.000 0.00 0.00 0.00 2.12
783 797 6.013032 AGGCTATGAACTATCCATGCACTATT 60.013 38.462 0.00 0.00 0.00 1.73
784 798 6.656693 GGCTATGAACTATCCATGCACTATTT 59.343 38.462 0.00 0.00 0.00 1.40
785 799 7.175641 GGCTATGAACTATCCATGCACTATTTT 59.824 37.037 0.00 0.00 0.00 1.82
786 800 8.019669 GCTATGAACTATCCATGCACTATTTTG 58.980 37.037 0.00 0.00 0.00 2.44
787 801 7.886629 ATGAACTATCCATGCACTATTTTGT 57.113 32.000 0.00 0.00 0.00 2.83
788 802 8.978874 ATGAACTATCCATGCACTATTTTGTA 57.021 30.769 0.00 0.00 0.00 2.41
789 803 8.978874 TGAACTATCCATGCACTATTTTGTAT 57.021 30.769 0.00 0.00 0.00 2.29
790 804 9.056005 TGAACTATCCATGCACTATTTTGTATC 57.944 33.333 0.00 0.00 0.00 2.24
791 805 7.658179 ACTATCCATGCACTATTTTGTATCG 57.342 36.000 0.00 0.00 0.00 2.92
792 806 7.217200 ACTATCCATGCACTATTTTGTATCGT 58.783 34.615 0.00 0.00 0.00 3.73
795 809 5.989168 TCCATGCACTATTTTGTATCGTAGG 59.011 40.000 0.00 0.00 0.00 3.18
796 810 5.989168 CCATGCACTATTTTGTATCGTAGGA 59.011 40.000 0.00 0.00 0.00 2.94
797 811 6.146184 CCATGCACTATTTTGTATCGTAGGAG 59.854 42.308 0.00 0.00 0.00 3.69
798 812 5.597806 TGCACTATTTTGTATCGTAGGAGG 58.402 41.667 0.00 0.00 0.00 4.30
800 814 5.921408 GCACTATTTTGTATCGTAGGAGGAG 59.079 44.000 0.00 0.00 0.00 3.69
801 815 6.448006 CACTATTTTGTATCGTAGGAGGAGG 58.552 44.000 0.00 0.00 0.00 4.30
802 816 3.814005 TTTTGTATCGTAGGAGGAGGC 57.186 47.619 0.00 0.00 0.00 4.70
803 817 2.750141 TTGTATCGTAGGAGGAGGCT 57.250 50.000 0.00 0.00 0.00 4.58
804 818 3.870538 TTGTATCGTAGGAGGAGGCTA 57.129 47.619 0.00 0.00 0.00 3.93
805 819 4.383931 TTGTATCGTAGGAGGAGGCTAT 57.616 45.455 0.00 0.00 0.00 2.97
806 820 3.687125 TGTATCGTAGGAGGAGGCTATG 58.313 50.000 0.00 0.00 0.00 2.23
807 821 2.982339 ATCGTAGGAGGAGGCTATGT 57.018 50.000 0.00 0.00 0.00 2.29
808 822 1.982660 TCGTAGGAGGAGGCTATGTG 58.017 55.000 0.00 0.00 0.00 3.21
809 823 1.493446 TCGTAGGAGGAGGCTATGTGA 59.507 52.381 0.00 0.00 0.00 3.58
810 824 1.609555 CGTAGGAGGAGGCTATGTGAC 59.390 57.143 0.00 0.00 0.00 3.67
811 825 2.667470 GTAGGAGGAGGCTATGTGACA 58.333 52.381 0.00 0.00 0.00 3.58
812 826 2.254152 AGGAGGAGGCTATGTGACAA 57.746 50.000 0.00 0.00 0.00 3.18
814 828 2.237392 AGGAGGAGGCTATGTGACAAAC 59.763 50.000 0.00 0.00 0.00 2.93
815 829 2.237392 GGAGGAGGCTATGTGACAAACT 59.763 50.000 0.00 0.00 0.00 2.66
816 830 3.451178 GGAGGAGGCTATGTGACAAACTA 59.549 47.826 0.00 0.00 0.00 2.24
817 831 4.101741 GGAGGAGGCTATGTGACAAACTAT 59.898 45.833 0.00 0.00 0.00 2.12
818 832 5.283457 AGGAGGCTATGTGACAAACTATC 57.717 43.478 0.00 0.00 0.00 2.08
819 833 4.965532 AGGAGGCTATGTGACAAACTATCT 59.034 41.667 0.00 0.00 0.00 1.98
820 834 6.136857 AGGAGGCTATGTGACAAACTATCTA 58.863 40.000 0.00 0.00 0.00 1.98
821 835 6.784969 AGGAGGCTATGTGACAAACTATCTAT 59.215 38.462 0.00 0.00 0.00 1.98
823 837 7.255977 GGAGGCTATGTGACAAACTATCTATCA 60.256 40.741 0.00 0.00 0.00 2.15
824 838 7.437748 AGGCTATGTGACAAACTATCTATCAC 58.562 38.462 0.00 0.00 40.08 3.06
831 845 8.720562 TGTGACAAACTATCTATCACATTTGTG 58.279 33.333 4.29 4.29 43.48 3.33
834 848 9.098355 GACAAACTATCTATCACATTTGTGCTA 57.902 33.333 5.81 0.32 45.25 3.49
835 849 9.618890 ACAAACTATCTATCACATTTGTGCTAT 57.381 29.630 5.81 0.00 45.25 2.97
837 851 8.526218 AACTATCTATCACATTTGTGCTATCG 57.474 34.615 5.81 0.00 45.25 2.92
839 853 5.529581 TCTATCACATTTGTGCTATCGGA 57.470 39.130 5.81 0.00 45.25 4.55
840 854 5.912892 TCTATCACATTTGTGCTATCGGAA 58.087 37.500 5.81 0.00 45.25 4.30
842 856 3.006940 TCACATTTGTGCTATCGGAACC 58.993 45.455 5.81 0.00 45.25 3.62
844 858 3.190327 CACATTTGTGCTATCGGAACCAA 59.810 43.478 0.00 0.00 39.39 3.67
845 859 3.823873 ACATTTGTGCTATCGGAACCAAA 59.176 39.130 0.00 0.00 0.00 3.28
846 860 4.462483 ACATTTGTGCTATCGGAACCAAAT 59.538 37.500 0.00 0.00 0.00 2.32
847 861 4.433186 TTTGTGCTATCGGAACCAAATG 57.567 40.909 0.00 0.00 0.00 2.32
849 863 2.746904 TGTGCTATCGGAACCAAATGTG 59.253 45.455 0.00 0.00 0.00 3.21
850 864 2.747446 GTGCTATCGGAACCAAATGTGT 59.253 45.455 0.00 0.00 0.00 3.72
853 867 5.065988 GTGCTATCGGAACCAAATGTGTATT 59.934 40.000 0.00 0.00 0.00 1.89
854 868 5.065859 TGCTATCGGAACCAAATGTGTATTG 59.934 40.000 0.00 0.00 0.00 1.90
855 869 5.295787 GCTATCGGAACCAAATGTGTATTGA 59.704 40.000 0.00 0.00 0.00 2.57
856 870 6.183360 GCTATCGGAACCAAATGTGTATTGAA 60.183 38.462 0.00 0.00 0.00 2.69
857 871 6.773976 ATCGGAACCAAATGTGTATTGAAT 57.226 33.333 0.00 0.00 0.00 2.57
858 872 6.189677 TCGGAACCAAATGTGTATTGAATC 57.810 37.500 0.00 0.00 0.00 2.52
859 873 5.707764 TCGGAACCAAATGTGTATTGAATCA 59.292 36.000 0.00 0.00 0.00 2.57
860 874 6.376864 TCGGAACCAAATGTGTATTGAATCAT 59.623 34.615 0.00 0.00 0.00 2.45
861 875 7.554476 TCGGAACCAAATGTGTATTGAATCATA 59.446 33.333 0.00 0.00 0.00 2.15
862 876 7.857389 CGGAACCAAATGTGTATTGAATCATAG 59.143 37.037 0.00 0.00 0.00 2.23
863 877 8.686334 GGAACCAAATGTGTATTGAATCATAGT 58.314 33.333 0.00 0.00 0.00 2.12
866 880 9.679661 ACCAAATGTGTATTGAATCATAGTACA 57.320 29.630 0.00 0.00 0.00 2.90
870 884 9.905713 AATGTGTATTGAATCATAGTACAACCT 57.094 29.630 0.00 0.00 0.00 3.50
871 885 9.905713 ATGTGTATTGAATCATAGTACAACCTT 57.094 29.630 0.00 0.00 0.00 3.50
873 887 9.601217 GTGTATTGAATCATAGTACAACCTTCT 57.399 33.333 0.00 0.00 0.00 2.85
874 888 9.817809 TGTATTGAATCATAGTACAACCTTCTC 57.182 33.333 0.00 0.00 0.00 2.87
876 890 8.954950 ATTGAATCATAGTACAACCTTCTCAG 57.045 34.615 0.00 0.00 0.00 3.35
878 892 6.155221 TGAATCATAGTACAACCTTCTCAGCT 59.845 38.462 0.00 0.00 0.00 4.24
879 893 6.552445 ATCATAGTACAACCTTCTCAGCTT 57.448 37.500 0.00 0.00 0.00 3.74
881 895 5.717178 TCATAGTACAACCTTCTCAGCTTCT 59.283 40.000 0.00 0.00 0.00 2.85
882 896 4.529109 AGTACAACCTTCTCAGCTTCTC 57.471 45.455 0.00 0.00 0.00 2.87
883 897 4.156477 AGTACAACCTTCTCAGCTTCTCT 58.844 43.478 0.00 0.00 0.00 3.10
884 898 3.676291 ACAACCTTCTCAGCTTCTCTC 57.324 47.619 0.00 0.00 0.00 3.20
885 899 2.968574 ACAACCTTCTCAGCTTCTCTCA 59.031 45.455 0.00 0.00 0.00 3.27
886 900 3.006752 ACAACCTTCTCAGCTTCTCTCAG 59.993 47.826 0.00 0.00 0.00 3.35
888 902 3.505386 ACCTTCTCAGCTTCTCTCAGAA 58.495 45.455 0.00 0.00 32.50 3.02
890 904 4.160252 ACCTTCTCAGCTTCTCTCAGAATC 59.840 45.833 0.00 0.00 33.13 2.52
892 906 3.351740 TCTCAGCTTCTCTCAGAATCGT 58.648 45.455 0.00 0.00 33.13 3.73
893 907 3.376859 TCTCAGCTTCTCTCAGAATCGTC 59.623 47.826 0.00 0.00 33.13 4.20
894 908 3.084786 TCAGCTTCTCTCAGAATCGTCA 58.915 45.455 0.00 0.00 33.13 4.35
896 910 3.088532 AGCTTCTCTCAGAATCGTCACT 58.911 45.455 0.00 0.00 33.13 3.41
897 911 3.128589 AGCTTCTCTCAGAATCGTCACTC 59.871 47.826 0.00 0.00 33.13 3.51
898 912 3.733684 GCTTCTCTCAGAATCGTCACTCC 60.734 52.174 0.00 0.00 33.13 3.85
901 915 4.781934 TCTCTCAGAATCGTCACTCCATA 58.218 43.478 0.00 0.00 0.00 2.74
902 916 5.380900 TCTCTCAGAATCGTCACTCCATAT 58.619 41.667 0.00 0.00 0.00 1.78
903 917 6.534634 TCTCTCAGAATCGTCACTCCATATA 58.465 40.000 0.00 0.00 0.00 0.86
905 919 7.667635 TCTCTCAGAATCGTCACTCCATATATT 59.332 37.037 0.00 0.00 0.00 1.28
906 920 8.183104 TCTCAGAATCGTCACTCCATATATTT 57.817 34.615 0.00 0.00 0.00 1.40
908 922 9.265901 CTCAGAATCGTCACTCCATATATTTTT 57.734 33.333 0.00 0.00 0.00 1.94
909 923 9.045223 TCAGAATCGTCACTCCATATATTTTTG 57.955 33.333 0.00 0.00 0.00 2.44
910 924 9.045223 CAGAATCGTCACTCCATATATTTTTGA 57.955 33.333 0.00 0.00 0.00 2.69
911 925 9.046296 AGAATCGTCACTCCATATATTTTTGAC 57.954 33.333 0.00 0.00 0.00 3.18
912 926 8.731275 AATCGTCACTCCATATATTTTTGACA 57.269 30.769 11.36 0.00 33.07 3.58
914 928 8.731275 TCGTCACTCCATATATTTTTGACAAT 57.269 30.769 11.36 0.00 33.07 2.71
915 929 8.826710 TCGTCACTCCATATATTTTTGACAATC 58.173 33.333 11.36 0.00 33.07 2.67
916 930 8.830580 CGTCACTCCATATATTTTTGACAATCT 58.169 33.333 11.36 0.00 33.07 2.40
932 946 8.974060 TTGACAATCTTGTTTAGTTAAGGTCT 57.026 30.769 0.00 0.00 42.43 3.85
987 1001 2.263077 CGATTCCGTGAGAAACTGAGG 58.737 52.381 0.00 0.00 38.21 3.86
988 1002 2.094700 CGATTCCGTGAGAAACTGAGGA 60.095 50.000 0.00 0.00 38.21 3.71
989 1003 3.516615 GATTCCGTGAGAAACTGAGGAG 58.483 50.000 0.00 0.00 38.21 3.69
990 1004 1.257743 TCCGTGAGAAACTGAGGAGG 58.742 55.000 0.00 0.00 0.00 4.30
991 1005 1.203013 TCCGTGAGAAACTGAGGAGGA 60.203 52.381 0.00 0.00 0.00 3.71
992 1006 1.618837 CCGTGAGAAACTGAGGAGGAA 59.381 52.381 0.00 0.00 0.00 3.36
993 1007 2.037251 CCGTGAGAAACTGAGGAGGAAA 59.963 50.000 0.00 0.00 0.00 3.13
994 1008 3.321497 CGTGAGAAACTGAGGAGGAAAG 58.679 50.000 0.00 0.00 0.00 2.62
995 1009 3.070748 GTGAGAAACTGAGGAGGAAAGC 58.929 50.000 0.00 0.00 0.00 3.51
996 1010 2.289072 TGAGAAACTGAGGAGGAAAGCG 60.289 50.000 0.00 0.00 0.00 4.68
997 1011 1.971357 AGAAACTGAGGAGGAAAGCGA 59.029 47.619 0.00 0.00 0.00 4.93
998 1012 2.569404 AGAAACTGAGGAGGAAAGCGAT 59.431 45.455 0.00 0.00 0.00 4.58
999 1013 3.008485 AGAAACTGAGGAGGAAAGCGATT 59.992 43.478 0.00 0.00 0.00 3.34
1006 1020 2.370189 AGGAGGAAAGCGATTATGGGAG 59.630 50.000 0.00 0.00 0.00 4.30
1007 1021 2.368875 GGAGGAAAGCGATTATGGGAGA 59.631 50.000 0.00 0.00 0.00 3.71
1009 1023 4.505742 GGAGGAAAGCGATTATGGGAGAAT 60.506 45.833 0.00 0.00 0.00 2.40
1010 1024 4.646572 AGGAAAGCGATTATGGGAGAATC 58.353 43.478 0.00 0.00 0.00 2.52
1018 1032 4.743151 CGATTATGGGAGAATCGTCGAAAA 59.257 41.667 0.00 0.00 46.68 2.29
1020 1034 3.887621 ATGGGAGAATCGTCGAAAAGA 57.112 42.857 0.00 0.00 34.37 2.52
1023 1037 3.006537 TGGGAGAATCGTCGAAAAGAACT 59.993 43.478 0.00 0.00 34.37 3.01
1026 1040 2.737252 AGAATCGTCGAAAAGAACTGGC 59.263 45.455 0.00 0.00 0.00 4.85
1027 1041 1.439679 ATCGTCGAAAAGAACTGGCC 58.560 50.000 0.00 0.00 0.00 5.36
1028 1042 0.601841 TCGTCGAAAAGAACTGGCCC 60.602 55.000 0.00 0.00 0.00 5.80
1035 1325 5.695363 GTCGAAAAGAACTGGCCCTATATAC 59.305 44.000 0.00 0.00 0.00 1.47
1036 1326 4.995487 CGAAAAGAACTGGCCCTATATACC 59.005 45.833 0.00 0.00 0.00 2.73
1041 1331 0.537188 CTGGCCCTATATACCTGCGG 59.463 60.000 0.00 0.00 0.00 5.69
1048 1338 1.478510 CTATATACCTGCGGCCTGAGG 59.521 57.143 14.05 14.05 35.26 3.86
1092 1382 7.893236 CACATTCACTCGATAGTTCTTTTAACG 59.107 37.037 0.00 0.00 31.97 3.18
1134 1424 2.048503 GCACAGCCCTACGTCGTT 60.049 61.111 1.78 0.00 0.00 3.85
1140 1430 0.683504 AGCCCTACGTCGTTGAGGAT 60.684 55.000 14.58 7.36 31.45 3.24
1242 1532 0.249155 CATATAACGACCACGGCCGT 60.249 55.000 28.70 28.70 44.46 5.68
1662 3493 4.270153 AGGGCAGGACTGGACCCA 62.270 66.667 14.79 0.00 45.45 4.51
1861 3695 3.635268 GACAGCCCAGGCCTTGAGG 62.635 68.421 0.00 5.54 43.17 3.86
1968 3802 4.840005 GCGCGGGGGAAGGAGAAG 62.840 72.222 8.83 0.00 0.00 2.85
2087 3921 1.450312 GGTTCATGGCCACGGAGAG 60.450 63.158 8.16 0.00 0.00 3.20
2130 3964 2.819117 GATCGAGTGGCTGTCGTGCA 62.819 60.000 8.55 0.00 38.60 4.57
2149 3983 4.333926 GTGCATGGAGGTTATCTCACTTTC 59.666 45.833 0.00 0.00 44.19 2.62
2322 4156 3.074412 CACAACAATACAGTGGACTCCC 58.926 50.000 0.00 0.00 0.00 4.30
2323 4157 2.979678 ACAACAATACAGTGGACTCCCT 59.020 45.455 0.00 0.00 0.00 4.20
2324 4158 3.394606 ACAACAATACAGTGGACTCCCTT 59.605 43.478 0.00 0.00 0.00 3.95
2325 4159 3.983044 ACAATACAGTGGACTCCCTTC 57.017 47.619 0.00 0.00 0.00 3.46
2326 4160 3.248024 ACAATACAGTGGACTCCCTTCA 58.752 45.455 0.00 0.00 0.00 3.02
2327 4161 3.650942 ACAATACAGTGGACTCCCTTCAA 59.349 43.478 0.00 0.00 0.00 2.69
2328 4162 4.104102 ACAATACAGTGGACTCCCTTCAAA 59.896 41.667 0.00 0.00 0.00 2.69
2329 4163 4.993705 ATACAGTGGACTCCCTTCAAAA 57.006 40.909 0.00 0.00 0.00 2.44
2330 4164 3.662759 ACAGTGGACTCCCTTCAAAAA 57.337 42.857 0.00 0.00 0.00 1.94
2366 4200 0.043334 AGTGGACTACTGCATCCCCT 59.957 55.000 1.64 0.00 38.49 4.79
2395 4229 7.495135 AAATGTTGGTTATTGCAGAAAAAGG 57.505 32.000 0.00 0.00 0.00 3.11
2425 4261 3.019799 TCTCTGGCGGTCTCTAGAAAT 57.980 47.619 0.00 0.00 0.00 2.17
2430 4266 2.569853 TGGCGGTCTCTAGAAATTCCAA 59.430 45.455 0.00 0.00 0.00 3.53
2431 4267 3.198872 GGCGGTCTCTAGAAATTCCAAG 58.801 50.000 0.00 0.00 0.00 3.61
2434 4270 4.142004 GCGGTCTCTAGAAATTCCAAGGTA 60.142 45.833 0.00 0.00 0.00 3.08
2493 4330 0.988063 AAAGTGAGAGGAGGAAGGCC 59.012 55.000 0.00 0.00 0.00 5.19
2533 4373 3.276091 CCCGTGCGTTGCAACAGA 61.276 61.111 28.01 11.66 41.47 3.41
2545 4385 5.050431 GCGTTGCAACAGACCAAATATTTTT 60.050 36.000 28.01 0.00 0.00 1.94
2569 4409 4.859304 AACATATAAGTCGGCCATACGA 57.141 40.909 2.24 0.00 41.13 3.43
2570 4410 5.401531 AACATATAAGTCGGCCATACGAT 57.598 39.130 2.24 2.48 45.47 3.73
2589 4430 9.454585 CATACGATACAAATCTTGATGCAAAAT 57.545 29.630 0.00 0.00 0.00 1.82
2696 4704 5.832539 ATGACCGATCTCCTTTATTGGAT 57.167 39.130 0.00 0.00 35.30 3.41
2756 5767 9.755804 TTGCTTACAATTGTGAATTTATTGACA 57.244 25.926 21.42 0.00 32.15 3.58
2757 5768 9.190858 TGCTTACAATTGTGAATTTATTGACAC 57.809 29.630 21.42 0.00 33.73 3.67
2758 5769 9.410556 GCTTACAATTGTGAATTTATTGACACT 57.589 29.630 21.42 0.00 33.73 3.55
2816 5827 9.594478 AGGTTTTTACCATAAGAAACAACTTTG 57.406 29.630 0.00 0.00 34.54 2.77
2825 5836 5.432885 AAGAAACAACTTTGTATGGACCG 57.567 39.130 0.00 0.00 41.31 4.79
2866 5878 5.452356 CCCTAGATTGATTTGGTTCATTGGC 60.452 44.000 0.00 0.00 0.00 4.52
2893 5978 4.990426 CCAAAGATTGGTGTGATGAAAACC 59.010 41.667 0.87 0.00 45.93 3.27
2894 5979 5.453057 CCAAAGATTGGTGTGATGAAAACCA 60.453 40.000 0.87 0.00 45.93 3.67
2899 5984 4.333913 TGGTGTGATGAAAACCAAATGG 57.666 40.909 0.00 0.00 40.97 3.16
2900 5985 3.070734 TGGTGTGATGAAAACCAAATGGG 59.929 43.478 4.17 0.00 40.97 4.00
2901 5986 3.556843 GGTGTGATGAAAACCAAATGGGG 60.557 47.826 4.17 0.00 42.91 4.96
2902 5987 2.636893 TGTGATGAAAACCAAATGGGGG 59.363 45.455 4.17 0.00 42.91 5.40
2903 5988 2.637382 GTGATGAAAACCAAATGGGGGT 59.363 45.455 4.17 0.00 42.91 4.95
2904 5989 2.636893 TGATGAAAACCAAATGGGGGTG 59.363 45.455 4.17 0.00 42.91 4.61
2905 5990 2.478872 TGAAAACCAAATGGGGGTGA 57.521 45.000 4.17 0.00 42.91 4.02
2906 5991 2.764269 TGAAAACCAAATGGGGGTGAA 58.236 42.857 4.17 0.00 42.91 3.18
2907 5992 3.115390 TGAAAACCAAATGGGGGTGAAA 58.885 40.909 4.17 0.00 42.91 2.69
2908 5993 3.523564 TGAAAACCAAATGGGGGTGAAAA 59.476 39.130 4.17 0.00 42.91 2.29
2909 5994 4.018415 TGAAAACCAAATGGGGGTGAAAAA 60.018 37.500 4.17 0.00 42.91 1.94
2910 5995 3.569194 AACCAAATGGGGGTGAAAAAC 57.431 42.857 4.17 0.00 42.91 2.43
2911 5996 1.771854 ACCAAATGGGGGTGAAAAACC 59.228 47.619 4.17 0.00 42.99 3.27
2912 5997 3.869737 ACCAAATGGGGGTGAAAAACCG 61.870 50.000 4.17 0.00 43.96 4.44
2939 6024 5.557891 AAAAATCGATGAAGAGCAGAAGG 57.442 39.130 0.00 0.00 0.00 3.46
2940 6025 4.478206 AAATCGATGAAGAGCAGAAGGA 57.522 40.909 0.00 0.00 0.00 3.36
2941 6026 4.686191 AATCGATGAAGAGCAGAAGGAT 57.314 40.909 0.00 0.00 0.00 3.24
2942 6027 3.449528 TCGATGAAGAGCAGAAGGATG 57.550 47.619 0.00 0.00 0.00 3.51
2943 6028 2.102084 TCGATGAAGAGCAGAAGGATGG 59.898 50.000 0.00 0.00 0.00 3.51
2944 6029 2.102084 CGATGAAGAGCAGAAGGATGGA 59.898 50.000 0.00 0.00 0.00 3.41
2945 6030 3.244146 CGATGAAGAGCAGAAGGATGGAT 60.244 47.826 0.00 0.00 0.00 3.41
2946 6031 3.555527 TGAAGAGCAGAAGGATGGATG 57.444 47.619 0.00 0.00 0.00 3.51
2947 6032 3.109928 TGAAGAGCAGAAGGATGGATGA 58.890 45.455 0.00 0.00 0.00 2.92
2948 6033 3.520721 TGAAGAGCAGAAGGATGGATGAA 59.479 43.478 0.00 0.00 0.00 2.57
2949 6034 3.842007 AGAGCAGAAGGATGGATGAAG 57.158 47.619 0.00 0.00 0.00 3.02
2950 6035 3.382278 AGAGCAGAAGGATGGATGAAGA 58.618 45.455 0.00 0.00 0.00 2.87
2951 6036 3.388676 AGAGCAGAAGGATGGATGAAGAG 59.611 47.826 0.00 0.00 0.00 2.85
2963 6048 0.119155 ATGAAGAGGTGGTGGGGAGA 59.881 55.000 0.00 0.00 0.00 3.71
2967 6052 1.529744 AGAGGTGGTGGGGAGAAAAA 58.470 50.000 0.00 0.00 0.00 1.94
2974 6059 1.067846 GGTGGGGAGAAAAATTGACGC 60.068 52.381 0.00 0.00 0.00 5.19
3035 6120 9.442047 TGAAGAGATTTCTTGTTCTTTCTATCC 57.558 33.333 2.71 0.00 43.63 2.59
3036 6121 9.442047 GAAGAGATTTCTTGTTCTTTCTATCCA 57.558 33.333 2.71 0.00 43.63 3.41
3037 6122 9.972106 AAGAGATTTCTTGTTCTTTCTATCCAT 57.028 29.630 0.00 0.00 42.04 3.41
3038 6123 9.972106 AGAGATTTCTTGTTCTTTCTATCCATT 57.028 29.630 0.00 0.00 0.00 3.16
3068 6153 6.912951 ATATAGTACTAGAACAATGCCCGT 57.087 37.500 8.85 0.00 0.00 5.28
3069 6154 3.247006 AGTACTAGAACAATGCCCGTG 57.753 47.619 0.00 0.00 0.00 4.94
3070 6155 1.664151 GTACTAGAACAATGCCCGTGC 59.336 52.381 0.00 0.00 38.26 5.34
3071 6156 1.019278 ACTAGAACAATGCCCGTGCG 61.019 55.000 0.00 0.00 41.78 5.34
3072 6157 1.004320 TAGAACAATGCCCGTGCGT 60.004 52.632 0.00 0.00 41.78 5.24
3077 6162 3.600694 AATGCCCGTGCGTTGCAA 61.601 55.556 0.00 0.00 44.90 4.08
3078 6163 3.839642 AATGCCCGTGCGTTGCAAC 62.840 57.895 19.89 19.89 44.90 4.17
3097 6182 9.216117 GTTGCAACGGGATATAAATATTCTAGT 57.784 33.333 14.90 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.241317 GCATTGAACTGATATATCTTTTGGTTG 57.759 33.333 13.79 5.98 0.00 3.77
7 8 9.193806 AGCATTGAACTGATATATCTTTTGGTT 57.806 29.630 13.79 10.08 0.00 3.67
8 9 8.757982 AGCATTGAACTGATATATCTTTTGGT 57.242 30.769 13.79 5.77 0.00 3.67
18 19 9.941325 CTTTCCTATCTAGCATTGAACTGATAT 57.059 33.333 0.00 0.00 0.00 1.63
19 20 8.370940 CCTTTCCTATCTAGCATTGAACTGATA 58.629 37.037 0.00 0.00 0.00 2.15
20 21 7.222872 CCTTTCCTATCTAGCATTGAACTGAT 58.777 38.462 0.00 0.00 0.00 2.90
21 22 6.408548 CCCTTTCCTATCTAGCATTGAACTGA 60.409 42.308 0.00 0.00 0.00 3.41
22 23 5.762218 CCCTTTCCTATCTAGCATTGAACTG 59.238 44.000 0.00 0.00 0.00 3.16
23 24 5.430089 ACCCTTTCCTATCTAGCATTGAACT 59.570 40.000 0.00 0.00 0.00 3.01
24 25 5.685728 ACCCTTTCCTATCTAGCATTGAAC 58.314 41.667 0.00 0.00 0.00 3.18
25 26 5.975988 ACCCTTTCCTATCTAGCATTGAA 57.024 39.130 0.00 0.00 0.00 2.69
26 27 6.844388 TCTTACCCTTTCCTATCTAGCATTGA 59.156 38.462 0.00 0.00 0.00 2.57
27 28 7.067496 TCTTACCCTTTCCTATCTAGCATTG 57.933 40.000 0.00 0.00 0.00 2.82
28 29 7.691993 TTCTTACCCTTTCCTATCTAGCATT 57.308 36.000 0.00 0.00 0.00 3.56
29 30 7.691993 TTTCTTACCCTTTCCTATCTAGCAT 57.308 36.000 0.00 0.00 0.00 3.79
30 31 7.347222 TCATTTCTTACCCTTTCCTATCTAGCA 59.653 37.037 0.00 0.00 0.00 3.49
31 32 7.658167 GTCATTTCTTACCCTTTCCTATCTAGC 59.342 40.741 0.00 0.00 0.00 3.42
32 33 8.929487 AGTCATTTCTTACCCTTTCCTATCTAG 58.071 37.037 0.00 0.00 0.00 2.43
33 34 8.855804 AGTCATTTCTTACCCTTTCCTATCTA 57.144 34.615 0.00 0.00 0.00 1.98
34 35 7.757242 AGTCATTTCTTACCCTTTCCTATCT 57.243 36.000 0.00 0.00 0.00 1.98
35 36 8.925338 TCTAGTCATTTCTTACCCTTTCCTATC 58.075 37.037 0.00 0.00 0.00 2.08
36 37 8.855804 TCTAGTCATTTCTTACCCTTTCCTAT 57.144 34.615 0.00 0.00 0.00 2.57
37 38 8.855804 ATCTAGTCATTTCTTACCCTTTCCTA 57.144 34.615 0.00 0.00 0.00 2.94
38 39 7.757242 ATCTAGTCATTTCTTACCCTTTCCT 57.243 36.000 0.00 0.00 0.00 3.36
39 40 8.047310 TGAATCTAGTCATTTCTTACCCTTTCC 58.953 37.037 0.00 0.00 0.00 3.13
40 41 9.620259 ATGAATCTAGTCATTTCTTACCCTTTC 57.380 33.333 0.00 0.00 34.49 2.62
43 44 9.440761 AGTATGAATCTAGTCATTTCTTACCCT 57.559 33.333 1.53 0.00 39.07 4.34
72 73 9.720769 TCTCCATCTTCGTTTATCTTTAGTTTT 57.279 29.630 0.00 0.00 0.00 2.43
73 74 9.720769 TTCTCCATCTTCGTTTATCTTTAGTTT 57.279 29.630 0.00 0.00 0.00 2.66
74 75 9.372369 CTTCTCCATCTTCGTTTATCTTTAGTT 57.628 33.333 0.00 0.00 0.00 2.24
75 76 7.982354 CCTTCTCCATCTTCGTTTATCTTTAGT 59.018 37.037 0.00 0.00 0.00 2.24
76 77 8.198109 TCCTTCTCCATCTTCGTTTATCTTTAG 58.802 37.037 0.00 0.00 0.00 1.85
77 78 7.980099 GTCCTTCTCCATCTTCGTTTATCTTTA 59.020 37.037 0.00 0.00 0.00 1.85
78 79 6.819146 GTCCTTCTCCATCTTCGTTTATCTTT 59.181 38.462 0.00 0.00 0.00 2.52
79 80 6.342111 GTCCTTCTCCATCTTCGTTTATCTT 58.658 40.000 0.00 0.00 0.00 2.40
80 81 5.450688 CGTCCTTCTCCATCTTCGTTTATCT 60.451 44.000 0.00 0.00 0.00 1.98
81 82 4.740695 CGTCCTTCTCCATCTTCGTTTATC 59.259 45.833 0.00 0.00 0.00 1.75
82 83 4.441634 CCGTCCTTCTCCATCTTCGTTTAT 60.442 45.833 0.00 0.00 0.00 1.40
83 84 3.119245 CCGTCCTTCTCCATCTTCGTTTA 60.119 47.826 0.00 0.00 0.00 2.01
84 85 2.353803 CCGTCCTTCTCCATCTTCGTTT 60.354 50.000 0.00 0.00 0.00 3.60
85 86 1.204941 CCGTCCTTCTCCATCTTCGTT 59.795 52.381 0.00 0.00 0.00 3.85
86 87 0.818296 CCGTCCTTCTCCATCTTCGT 59.182 55.000 0.00 0.00 0.00 3.85
87 88 1.066303 CTCCGTCCTTCTCCATCTTCG 59.934 57.143 0.00 0.00 0.00 3.79
88 89 1.410882 CCTCCGTCCTTCTCCATCTTC 59.589 57.143 0.00 0.00 0.00 2.87
89 90 1.007238 TCCTCCGTCCTTCTCCATCTT 59.993 52.381 0.00 0.00 0.00 2.40
90 91 0.631753 TCCTCCGTCCTTCTCCATCT 59.368 55.000 0.00 0.00 0.00 2.90
91 92 1.486211 TTCCTCCGTCCTTCTCCATC 58.514 55.000 0.00 0.00 0.00 3.51
92 93 1.952621 TTTCCTCCGTCCTTCTCCAT 58.047 50.000 0.00 0.00 0.00 3.41
93 94 1.831736 GATTTCCTCCGTCCTTCTCCA 59.168 52.381 0.00 0.00 0.00 3.86
94 95 1.831736 TGATTTCCTCCGTCCTTCTCC 59.168 52.381 0.00 0.00 0.00 3.71
95 96 2.498078 AGTGATTTCCTCCGTCCTTCTC 59.502 50.000 0.00 0.00 0.00 2.87
96 97 2.541466 AGTGATTTCCTCCGTCCTTCT 58.459 47.619 0.00 0.00 0.00 2.85
97 98 4.674281 ATAGTGATTTCCTCCGTCCTTC 57.326 45.455 0.00 0.00 0.00 3.46
98 99 5.429130 GAAATAGTGATTTCCTCCGTCCTT 58.571 41.667 0.00 0.00 43.54 3.36
99 100 5.024785 GAAATAGTGATTTCCTCCGTCCT 57.975 43.478 0.00 0.00 43.54 3.85
109 110 4.192317 GGTCAGCGAGGAAATAGTGATTT 58.808 43.478 0.00 0.00 38.00 2.17
110 111 3.432326 GGGTCAGCGAGGAAATAGTGATT 60.432 47.826 0.00 0.00 0.00 2.57
111 112 2.103263 GGGTCAGCGAGGAAATAGTGAT 59.897 50.000 0.00 0.00 0.00 3.06
112 113 1.480954 GGGTCAGCGAGGAAATAGTGA 59.519 52.381 0.00 0.00 0.00 3.41
113 114 1.473434 GGGGTCAGCGAGGAAATAGTG 60.473 57.143 0.00 0.00 0.00 2.74
114 115 0.831307 GGGGTCAGCGAGGAAATAGT 59.169 55.000 0.00 0.00 0.00 2.12
115 116 1.123928 AGGGGTCAGCGAGGAAATAG 58.876 55.000 0.00 0.00 0.00 1.73
116 117 1.485066 GAAGGGGTCAGCGAGGAAATA 59.515 52.381 0.00 0.00 0.00 1.40
117 118 0.253327 GAAGGGGTCAGCGAGGAAAT 59.747 55.000 0.00 0.00 0.00 2.17
118 119 1.677552 GAAGGGGTCAGCGAGGAAA 59.322 57.895 0.00 0.00 0.00 3.13
119 120 2.291043 GGAAGGGGTCAGCGAGGAA 61.291 63.158 0.00 0.00 0.00 3.36
143 144 1.064357 GTACAACCACACCAACAACCG 59.936 52.381 0.00 0.00 0.00 4.44
149 150 0.107116 AAGGCGTACAACCACACCAA 60.107 50.000 4.83 0.00 0.00 3.67
150 151 0.533308 GAAGGCGTACAACCACACCA 60.533 55.000 4.83 0.00 0.00 4.17
164 165 1.741770 CCTACACCTGCACGAAGGC 60.742 63.158 0.00 0.00 41.46 4.35
175 176 2.125512 CCTCGCACTGCCTACACC 60.126 66.667 0.00 0.00 0.00 4.16
183 184 4.320456 ACTGCACCCCTCGCACTG 62.320 66.667 0.00 0.00 35.08 3.66
184 185 4.008933 GACTGCACCCCTCGCACT 62.009 66.667 0.00 0.00 35.08 4.40
185 186 3.612247 ATGACTGCACCCCTCGCAC 62.612 63.158 0.00 0.00 35.08 5.34
186 187 3.315142 GATGACTGCACCCCTCGCA 62.315 63.158 0.00 0.00 37.88 5.10
208 209 0.036448 AGGACTCTGACGTCTCCGAA 59.964 55.000 17.92 0.00 37.88 4.30
226 227 0.039617 GCATCATCTCCTCGGACGAG 60.040 60.000 14.39 14.39 41.63 4.18
231 232 1.006805 GTCGGCATCATCTCCTCGG 60.007 63.158 0.00 0.00 0.00 4.63
263 264 2.435059 GAAGGAGGAGGCGTGTGC 60.435 66.667 0.00 0.00 41.71 4.57
268 269 2.581354 CTGGTGAAGGAGGAGGCG 59.419 66.667 0.00 0.00 0.00 5.52
287 288 1.439679 GACAAAGCCAAGACTACCCG 58.560 55.000 0.00 0.00 0.00 5.28
290 291 0.796927 GCGGACAAAGCCAAGACTAC 59.203 55.000 0.00 0.00 0.00 2.73
291 292 0.685097 AGCGGACAAAGCCAAGACTA 59.315 50.000 0.00 0.00 34.64 2.59
292 293 0.886490 CAGCGGACAAAGCCAAGACT 60.886 55.000 0.00 0.00 34.64 3.24
294 295 2.260869 GCAGCGGACAAAGCCAAGA 61.261 57.895 0.00 0.00 34.64 3.02
301 302 1.298157 CGAAGGATGCAGCGGACAAA 61.298 55.000 0.00 0.00 0.00 2.83
305 306 2.184322 GACGAAGGATGCAGCGGA 59.816 61.111 0.00 0.00 0.00 5.54
307 308 3.918220 GCGACGAAGGATGCAGCG 61.918 66.667 0.00 0.00 0.00 5.18
309 310 1.880340 GAGGCGACGAAGGATGCAG 60.880 63.158 0.00 0.00 0.00 4.41
310 311 2.184322 GAGGCGACGAAGGATGCA 59.816 61.111 0.00 0.00 0.00 3.96
390 395 1.598701 GCTCACCATGGCAAAGACCC 61.599 60.000 13.04 0.00 0.00 4.46
401 406 2.107750 CCATCGCTCGCTCACCAT 59.892 61.111 0.00 0.00 0.00 3.55
425 430 4.838486 CGACCAGCTCCTCGCGAC 62.838 72.222 3.71 0.00 45.59 5.19
427 432 4.421479 AACGACCAGCTCCTCGCG 62.421 66.667 0.00 0.00 45.59 5.87
428 433 2.507324 GAACGACCAGCTCCTCGC 60.507 66.667 9.07 0.00 39.57 5.03
430 435 0.820871 ATCTGAACGACCAGCTCCTC 59.179 55.000 0.00 0.00 34.28 3.71
446 451 1.934220 ATGCACACGTCGGTCGATCT 61.934 55.000 0.92 0.00 42.86 2.75
477 482 1.026718 CACGGAAGCAATGTCCTCCC 61.027 60.000 0.00 0.00 32.53 4.30
504 510 2.489275 GCAGGAGAGGGAGAGAGCG 61.489 68.421 0.00 0.00 0.00 5.03
507 513 0.553819 GGTAGCAGGAGAGGGAGAGA 59.446 60.000 0.00 0.00 0.00 3.10
519 525 0.792640 CACGCAACAAGAGGTAGCAG 59.207 55.000 0.00 0.00 0.00 4.24
524 530 2.972505 CCGCACGCAACAAGAGGT 60.973 61.111 0.00 0.00 0.00 3.85
551 557 0.040336 GATGCGGACGCTCGAATCTA 60.040 55.000 18.04 0.00 40.91 1.98
581 587 0.879400 GATCCTCATGCCTGCGTCAG 60.879 60.000 0.00 0.52 0.00 3.51
582 588 1.144716 GATCCTCATGCCTGCGTCA 59.855 57.895 0.00 0.00 0.00 4.35
583 589 1.596477 GGATCCTCATGCCTGCGTC 60.596 63.158 3.84 0.00 0.00 5.19
588 594 1.420514 CACTGATGGATCCTCATGCCT 59.579 52.381 14.23 0.00 0.00 4.75
589 595 1.893544 CACTGATGGATCCTCATGCC 58.106 55.000 14.23 0.00 0.00 4.40
620 626 0.822811 TTCTCTAGCTGCTCCTGCTG 59.177 55.000 4.91 0.00 38.96 4.41
623 629 0.752054 CCCTTCTCTAGCTGCTCCTG 59.248 60.000 4.91 0.00 0.00 3.86
632 646 1.604604 CTCTCCGAGCCCTTCTCTAG 58.395 60.000 0.00 0.00 39.70 2.43
645 659 4.227134 CCATCGTGCCCCTCTCCG 62.227 72.222 0.00 0.00 0.00 4.63
659 673 2.283676 ACCCAGTCGTCCGTCCAT 60.284 61.111 0.00 0.00 0.00 3.41
660 674 3.299977 CACCCAGTCGTCCGTCCA 61.300 66.667 0.00 0.00 0.00 4.02
665 679 4.016706 CACCCCACCCAGTCGTCC 62.017 72.222 0.00 0.00 0.00 4.79
667 681 2.770904 AACACCCCACCCAGTCGT 60.771 61.111 0.00 0.00 0.00 4.34
672 686 4.263572 CGCAGAACACCCCACCCA 62.264 66.667 0.00 0.00 0.00 4.51
676 690 4.641645 CAGGCGCAGAACACCCCA 62.642 66.667 10.83 0.00 0.00 4.96
680 694 3.426568 GCTCCAGGCGCAGAACAC 61.427 66.667 10.83 0.00 0.00 3.32
703 717 5.306678 AGGCTATGAACTATTTGCTAGCTCT 59.693 40.000 17.23 2.90 33.72 4.09
706 720 5.994668 AGAAGGCTATGAACTATTTGCTAGC 59.005 40.000 8.10 8.10 0.00 3.42
707 721 6.648725 GGAGAAGGCTATGAACTATTTGCTAG 59.351 42.308 0.00 0.00 0.00 3.42
708 722 6.464465 GGGAGAAGGCTATGAACTATTTGCTA 60.464 42.308 0.00 0.00 0.00 3.49
709 723 5.372373 GGAGAAGGCTATGAACTATTTGCT 58.628 41.667 0.00 0.00 0.00 3.91
710 724 4.517075 GGGAGAAGGCTATGAACTATTTGC 59.483 45.833 0.00 0.00 0.00 3.68
711 725 5.934781 AGGGAGAAGGCTATGAACTATTTG 58.065 41.667 0.00 0.00 0.00 2.32
712 726 6.582929 AAGGGAGAAGGCTATGAACTATTT 57.417 37.500 0.00 0.00 0.00 1.40
713 727 6.069381 ACAAAGGGAGAAGGCTATGAACTATT 60.069 38.462 0.00 0.00 0.00 1.73
714 728 5.430089 ACAAAGGGAGAAGGCTATGAACTAT 59.570 40.000 0.00 0.00 0.00 2.12
715 729 4.783227 ACAAAGGGAGAAGGCTATGAACTA 59.217 41.667 0.00 0.00 0.00 2.24
716 730 3.589288 ACAAAGGGAGAAGGCTATGAACT 59.411 43.478 0.00 0.00 0.00 3.01
718 732 3.054361 GGACAAAGGGAGAAGGCTATGAA 60.054 47.826 0.00 0.00 0.00 2.57
719 733 2.505819 GGACAAAGGGAGAAGGCTATGA 59.494 50.000 0.00 0.00 0.00 2.15
720 734 2.422093 GGGACAAAGGGAGAAGGCTATG 60.422 54.545 0.00 0.00 0.00 2.23
721 735 1.847088 GGGACAAAGGGAGAAGGCTAT 59.153 52.381 0.00 0.00 0.00 2.97
722 736 1.203440 AGGGACAAAGGGAGAAGGCTA 60.203 52.381 0.00 0.00 0.00 3.93
723 737 0.476611 AGGGACAAAGGGAGAAGGCT 60.477 55.000 0.00 0.00 0.00 4.58
724 738 0.405973 AAGGGACAAAGGGAGAAGGC 59.594 55.000 0.00 0.00 0.00 4.35
726 740 2.959465 ACAAGGGACAAAGGGAGAAG 57.041 50.000 0.00 0.00 0.00 2.85
728 742 3.055385 CGATAACAAGGGACAAAGGGAGA 60.055 47.826 0.00 0.00 0.00 3.71
730 744 2.640826 ACGATAACAAGGGACAAAGGGA 59.359 45.455 0.00 0.00 0.00 4.20
732 746 4.081309 TCCTACGATAACAAGGGACAAAGG 60.081 45.833 0.00 0.00 0.00 3.11
735 749 4.346730 TCTCCTACGATAACAAGGGACAA 58.653 43.478 0.00 0.00 0.00 3.18
736 750 3.972133 TCTCCTACGATAACAAGGGACA 58.028 45.455 0.00 0.00 0.00 4.02
737 751 4.202131 CCTTCTCCTACGATAACAAGGGAC 60.202 50.000 0.00 0.00 0.00 4.46
740 754 3.385111 AGCCTTCTCCTACGATAACAAGG 59.615 47.826 0.00 0.00 33.40 3.61
742 756 5.831525 TCATAGCCTTCTCCTACGATAACAA 59.168 40.000 0.00 0.00 0.00 2.83
743 757 5.382616 TCATAGCCTTCTCCTACGATAACA 58.617 41.667 0.00 0.00 0.00 2.41
745 759 6.069331 AGTTCATAGCCTTCTCCTACGATAA 58.931 40.000 0.00 0.00 0.00 1.75
746 760 5.632118 AGTTCATAGCCTTCTCCTACGATA 58.368 41.667 0.00 0.00 0.00 2.92
747 761 4.475345 AGTTCATAGCCTTCTCCTACGAT 58.525 43.478 0.00 0.00 0.00 3.73
748 762 3.899726 AGTTCATAGCCTTCTCCTACGA 58.100 45.455 0.00 0.00 0.00 3.43
751 765 5.965486 TGGATAGTTCATAGCCTTCTCCTA 58.035 41.667 0.00 0.00 40.85 2.94
752 766 4.820775 TGGATAGTTCATAGCCTTCTCCT 58.179 43.478 0.00 0.00 40.85 3.69
756 770 4.453819 GTGCATGGATAGTTCATAGCCTTC 59.546 45.833 0.00 0.00 40.85 3.46
757 771 4.103785 AGTGCATGGATAGTTCATAGCCTT 59.896 41.667 0.00 0.00 40.85 4.35
758 772 3.649981 AGTGCATGGATAGTTCATAGCCT 59.350 43.478 0.00 0.00 40.85 4.58
759 773 4.013267 AGTGCATGGATAGTTCATAGCC 57.987 45.455 0.00 0.00 40.62 3.93
761 775 9.060347 ACAAAATAGTGCATGGATAGTTCATAG 57.940 33.333 0.00 0.00 0.00 2.23
762 776 8.978874 ACAAAATAGTGCATGGATAGTTCATA 57.021 30.769 0.00 0.00 0.00 2.15
763 777 7.886629 ACAAAATAGTGCATGGATAGTTCAT 57.113 32.000 0.00 0.00 0.00 2.57
764 778 8.978874 ATACAAAATAGTGCATGGATAGTTCA 57.021 30.769 0.00 0.00 0.00 3.18
766 780 7.715249 ACGATACAAAATAGTGCATGGATAGTT 59.285 33.333 0.00 0.00 0.00 2.24
767 781 7.217200 ACGATACAAAATAGTGCATGGATAGT 58.783 34.615 0.00 0.00 0.00 2.12
768 782 7.658179 ACGATACAAAATAGTGCATGGATAG 57.342 36.000 0.00 0.00 0.00 2.08
769 783 7.817478 CCTACGATACAAAATAGTGCATGGATA 59.183 37.037 0.00 0.00 0.00 2.59
770 784 6.650807 CCTACGATACAAAATAGTGCATGGAT 59.349 38.462 0.00 0.00 0.00 3.41
771 785 5.989168 CCTACGATACAAAATAGTGCATGGA 59.011 40.000 0.00 0.00 0.00 3.41
773 787 6.146184 CCTCCTACGATACAAAATAGTGCATG 59.854 42.308 0.00 0.00 0.00 4.06
774 788 6.041637 TCCTCCTACGATACAAAATAGTGCAT 59.958 38.462 0.00 0.00 0.00 3.96
775 789 5.361571 TCCTCCTACGATACAAAATAGTGCA 59.638 40.000 0.00 0.00 0.00 4.57
776 790 5.839621 TCCTCCTACGATACAAAATAGTGC 58.160 41.667 0.00 0.00 0.00 4.40
777 791 6.448006 CCTCCTCCTACGATACAAAATAGTG 58.552 44.000 0.00 0.00 0.00 2.74
778 792 5.010820 GCCTCCTCCTACGATACAAAATAGT 59.989 44.000 0.00 0.00 0.00 2.12
779 793 5.244178 AGCCTCCTCCTACGATACAAAATAG 59.756 44.000 0.00 0.00 0.00 1.73
781 795 3.967987 AGCCTCCTCCTACGATACAAAAT 59.032 43.478 0.00 0.00 0.00 1.82
782 796 3.371965 AGCCTCCTCCTACGATACAAAA 58.628 45.455 0.00 0.00 0.00 2.44
783 797 3.028094 AGCCTCCTCCTACGATACAAA 57.972 47.619 0.00 0.00 0.00 2.83
784 798 2.750141 AGCCTCCTCCTACGATACAA 57.250 50.000 0.00 0.00 0.00 2.41
785 799 3.074094 ACATAGCCTCCTCCTACGATACA 59.926 47.826 0.00 0.00 0.00 2.29
786 800 3.440872 CACATAGCCTCCTCCTACGATAC 59.559 52.174 0.00 0.00 0.00 2.24
787 801 3.329814 TCACATAGCCTCCTCCTACGATA 59.670 47.826 0.00 0.00 0.00 2.92
788 802 2.108425 TCACATAGCCTCCTCCTACGAT 59.892 50.000 0.00 0.00 0.00 3.73
789 803 1.493446 TCACATAGCCTCCTCCTACGA 59.507 52.381 0.00 0.00 0.00 3.43
790 804 1.609555 GTCACATAGCCTCCTCCTACG 59.390 57.143 0.00 0.00 0.00 3.51
791 805 2.667470 TGTCACATAGCCTCCTCCTAC 58.333 52.381 0.00 0.00 0.00 3.18
792 806 3.398318 TTGTCACATAGCCTCCTCCTA 57.602 47.619 0.00 0.00 0.00 2.94
795 809 3.618690 AGTTTGTCACATAGCCTCCTC 57.381 47.619 0.00 0.00 0.00 3.71
796 810 4.965532 AGATAGTTTGTCACATAGCCTCCT 59.034 41.667 0.00 0.00 0.00 3.69
797 811 5.283457 AGATAGTTTGTCACATAGCCTCC 57.717 43.478 0.00 0.00 0.00 4.30
798 812 7.596995 GTGATAGATAGTTTGTCACATAGCCTC 59.403 40.741 0.00 0.00 39.10 4.70
800 814 7.210174 TGTGATAGATAGTTTGTCACATAGCC 58.790 38.462 2.68 0.00 42.82 3.93
823 837 3.066291 TGGTTCCGATAGCACAAATGT 57.934 42.857 0.00 0.00 0.00 2.71
824 838 4.433186 TTTGGTTCCGATAGCACAAATG 57.567 40.909 0.00 0.00 0.00 2.32
825 839 4.462483 ACATTTGGTTCCGATAGCACAAAT 59.538 37.500 0.00 0.00 0.00 2.32
826 840 3.823873 ACATTTGGTTCCGATAGCACAAA 59.176 39.130 0.00 0.00 0.00 2.83
827 841 3.190327 CACATTTGGTTCCGATAGCACAA 59.810 43.478 0.00 0.00 0.00 3.33
828 842 2.746904 CACATTTGGTTCCGATAGCACA 59.253 45.455 0.00 0.00 0.00 4.57
829 843 2.747446 ACACATTTGGTTCCGATAGCAC 59.253 45.455 0.00 0.00 0.00 4.40
831 845 5.295787 TCAATACACATTTGGTTCCGATAGC 59.704 40.000 0.00 0.00 0.00 2.97
834 848 6.376864 TGATTCAATACACATTTGGTTCCGAT 59.623 34.615 0.00 0.00 0.00 4.18
835 849 5.707764 TGATTCAATACACATTTGGTTCCGA 59.292 36.000 0.00 0.00 0.00 4.55
836 850 5.948588 TGATTCAATACACATTTGGTTCCG 58.051 37.500 0.00 0.00 0.00 4.30
837 851 8.686334 ACTATGATTCAATACACATTTGGTTCC 58.314 33.333 0.00 0.00 0.00 3.62
840 854 9.679661 TGTACTATGATTCAATACACATTTGGT 57.320 29.630 0.00 0.00 0.00 3.67
844 858 9.905713 AGGTTGTACTATGATTCAATACACATT 57.094 29.630 7.80 0.00 0.00 2.71
845 859 9.905713 AAGGTTGTACTATGATTCAATACACAT 57.094 29.630 7.80 0.00 0.00 3.21
846 860 9.378551 GAAGGTTGTACTATGATTCAATACACA 57.621 33.333 7.80 1.18 0.00 3.72
847 861 9.601217 AGAAGGTTGTACTATGATTCAATACAC 57.399 33.333 7.80 5.14 0.00 2.90
849 863 9.817809 TGAGAAGGTTGTACTATGATTCAATAC 57.182 33.333 0.00 0.00 0.00 1.89
853 867 6.155221 AGCTGAGAAGGTTGTACTATGATTCA 59.845 38.462 0.00 0.00 0.00 2.57
854 868 6.578023 AGCTGAGAAGGTTGTACTATGATTC 58.422 40.000 0.00 0.00 0.00 2.52
855 869 6.552445 AGCTGAGAAGGTTGTACTATGATT 57.448 37.500 0.00 0.00 0.00 2.57
856 870 6.382570 AGAAGCTGAGAAGGTTGTACTATGAT 59.617 38.462 0.00 0.00 0.00 2.45
857 871 5.717178 AGAAGCTGAGAAGGTTGTACTATGA 59.283 40.000 0.00 0.00 0.00 2.15
858 872 5.971763 AGAAGCTGAGAAGGTTGTACTATG 58.028 41.667 0.00 0.00 0.00 2.23
859 873 5.955355 AGAGAAGCTGAGAAGGTTGTACTAT 59.045 40.000 0.00 0.00 0.00 2.12
860 874 5.326069 AGAGAAGCTGAGAAGGTTGTACTA 58.674 41.667 0.00 0.00 0.00 1.82
861 875 4.156477 AGAGAAGCTGAGAAGGTTGTACT 58.844 43.478 0.00 0.00 0.00 2.73
862 876 4.021894 TGAGAGAAGCTGAGAAGGTTGTAC 60.022 45.833 0.00 0.00 0.00 2.90
863 877 4.152647 TGAGAGAAGCTGAGAAGGTTGTA 58.847 43.478 0.00 0.00 0.00 2.41
865 879 3.257873 TCTGAGAGAAGCTGAGAAGGTTG 59.742 47.826 0.00 0.00 33.72 3.77
866 880 3.505386 TCTGAGAGAAGCTGAGAAGGTT 58.495 45.455 0.00 0.00 33.72 3.50
871 885 3.351740 ACGATTCTGAGAGAAGCTGAGA 58.648 45.455 0.00 0.00 38.40 3.27
873 887 3.084786 TGACGATTCTGAGAGAAGCTGA 58.915 45.455 0.00 0.00 38.40 4.26
874 888 3.119531 AGTGACGATTCTGAGAGAAGCTG 60.120 47.826 0.00 0.00 38.40 4.24
876 890 3.434637 GAGTGACGATTCTGAGAGAAGC 58.565 50.000 0.00 0.00 37.69 3.86
878 892 3.421844 TGGAGTGACGATTCTGAGAGAA 58.578 45.455 0.00 0.00 38.78 2.87
879 893 3.073274 TGGAGTGACGATTCTGAGAGA 57.927 47.619 0.00 0.00 0.00 3.10
881 895 7.767250 AATATATGGAGTGACGATTCTGAGA 57.233 36.000 0.00 0.00 0.00 3.27
882 896 8.824159 AAAATATATGGAGTGACGATTCTGAG 57.176 34.615 0.00 0.00 0.00 3.35
883 897 9.045223 CAAAAATATATGGAGTGACGATTCTGA 57.955 33.333 0.00 0.00 0.00 3.27
884 898 9.045223 TCAAAAATATATGGAGTGACGATTCTG 57.955 33.333 0.00 0.00 0.00 3.02
885 899 9.046296 GTCAAAAATATATGGAGTGACGATTCT 57.954 33.333 0.00 0.00 0.00 2.40
886 900 8.826710 TGTCAAAAATATATGGAGTGACGATTC 58.173 33.333 0.00 0.00 37.34 2.52
888 902 8.731275 TTGTCAAAAATATATGGAGTGACGAT 57.269 30.769 0.00 0.00 37.34 3.73
890 904 8.830580 AGATTGTCAAAAATATATGGAGTGACG 58.169 33.333 11.46 0.00 37.34 4.35
906 920 9.403583 AGACCTTAACTAAACAAGATTGTCAAA 57.596 29.630 0.00 0.00 41.31 2.69
967 981 2.094700 TCCTCAGTTTCTCACGGAATCG 60.095 50.000 0.00 0.00 43.02 3.34
968 982 3.516615 CTCCTCAGTTTCTCACGGAATC 58.483 50.000 0.00 0.00 33.53 2.52
969 983 2.234908 CCTCCTCAGTTTCTCACGGAAT 59.765 50.000 0.00 0.00 33.53 3.01
970 984 1.618837 CCTCCTCAGTTTCTCACGGAA 59.381 52.381 0.00 0.00 0.00 4.30
971 985 1.203013 TCCTCCTCAGTTTCTCACGGA 60.203 52.381 0.00 0.00 0.00 4.69
972 986 1.257743 TCCTCCTCAGTTTCTCACGG 58.742 55.000 0.00 0.00 0.00 4.94
973 987 3.321497 CTTTCCTCCTCAGTTTCTCACG 58.679 50.000 0.00 0.00 0.00 4.35
974 988 3.070748 GCTTTCCTCCTCAGTTTCTCAC 58.929 50.000 0.00 0.00 0.00 3.51
975 989 2.289072 CGCTTTCCTCCTCAGTTTCTCA 60.289 50.000 0.00 0.00 0.00 3.27
976 990 2.028930 TCGCTTTCCTCCTCAGTTTCTC 60.029 50.000 0.00 0.00 0.00 2.87
977 991 1.971357 TCGCTTTCCTCCTCAGTTTCT 59.029 47.619 0.00 0.00 0.00 2.52
978 992 2.457366 TCGCTTTCCTCCTCAGTTTC 57.543 50.000 0.00 0.00 0.00 2.78
979 993 3.425162 AATCGCTTTCCTCCTCAGTTT 57.575 42.857 0.00 0.00 0.00 2.66
980 994 4.446371 CATAATCGCTTTCCTCCTCAGTT 58.554 43.478 0.00 0.00 0.00 3.16
981 995 3.181461 CCATAATCGCTTTCCTCCTCAGT 60.181 47.826 0.00 0.00 0.00 3.41
982 996 3.397482 CCATAATCGCTTTCCTCCTCAG 58.603 50.000 0.00 0.00 0.00 3.35
983 997 2.104792 CCCATAATCGCTTTCCTCCTCA 59.895 50.000 0.00 0.00 0.00 3.86
984 998 2.368875 TCCCATAATCGCTTTCCTCCTC 59.631 50.000 0.00 0.00 0.00 3.71
985 999 2.370189 CTCCCATAATCGCTTTCCTCCT 59.630 50.000 0.00 0.00 0.00 3.69
986 1000 2.368875 TCTCCCATAATCGCTTTCCTCC 59.631 50.000 0.00 0.00 0.00 4.30
987 1001 3.753294 TCTCCCATAATCGCTTTCCTC 57.247 47.619 0.00 0.00 0.00 3.71
988 1002 4.646572 GATTCTCCCATAATCGCTTTCCT 58.353 43.478 0.00 0.00 0.00 3.36
989 1003 3.433615 CGATTCTCCCATAATCGCTTTCC 59.566 47.826 5.41 0.00 46.21 3.13
990 1004 4.653806 CGATTCTCCCATAATCGCTTTC 57.346 45.455 5.41 0.00 46.21 2.62
996 1010 5.983720 TCTTTTCGACGATTCTCCCATAATC 59.016 40.000 0.00 0.00 0.00 1.75
997 1011 5.914033 TCTTTTCGACGATTCTCCCATAAT 58.086 37.500 0.00 0.00 0.00 1.28
998 1012 5.333299 TCTTTTCGACGATTCTCCCATAA 57.667 39.130 0.00 0.00 0.00 1.90
999 1013 4.994907 TCTTTTCGACGATTCTCCCATA 57.005 40.909 0.00 0.00 0.00 2.74
1006 1020 2.159693 GGCCAGTTCTTTTCGACGATTC 60.160 50.000 0.00 0.00 0.00 2.52
1007 1021 1.804748 GGCCAGTTCTTTTCGACGATT 59.195 47.619 0.00 0.00 0.00 3.34
1009 1023 0.601841 GGGCCAGTTCTTTTCGACGA 60.602 55.000 4.39 0.00 0.00 4.20
1010 1024 0.602905 AGGGCCAGTTCTTTTCGACG 60.603 55.000 6.18 0.00 0.00 5.12
1011 1025 2.467566 TAGGGCCAGTTCTTTTCGAC 57.532 50.000 6.18 0.00 0.00 4.20
1018 1032 2.907042 GCAGGTATATAGGGCCAGTTCT 59.093 50.000 6.18 0.00 0.00 3.01
1020 1034 1.623811 CGCAGGTATATAGGGCCAGTT 59.376 52.381 6.18 0.00 0.00 3.16
1056 1346 0.870393 AGTGAATGTGAAGCGTGCAG 59.130 50.000 0.00 0.00 0.00 4.41
1092 1382 3.792053 ATCCGCCGAGAACGCCATC 62.792 63.158 0.00 0.00 38.29 3.51
1242 1532 2.649034 GCGTCCTTCCACTCGACA 59.351 61.111 0.00 0.00 0.00 4.35
1662 3493 2.471815 TGTACCCCTCGATCCTCATT 57.528 50.000 0.00 0.00 0.00 2.57
1968 3802 2.792599 ACGAGCTCGACGTCATCC 59.207 61.111 40.58 2.21 43.02 3.51
2049 3883 2.786495 CCTGATGACCCGGACGAGG 61.786 68.421 0.73 0.10 0.00 4.63
2157 3991 6.763610 AGAAATGATAACCTCCACGATTCTTC 59.236 38.462 0.00 0.00 0.00 2.87
2158 3992 6.540189 CAGAAATGATAACCTCCACGATTCTT 59.460 38.462 0.00 0.00 0.00 2.52
2159 3993 6.051717 CAGAAATGATAACCTCCACGATTCT 58.948 40.000 0.00 0.00 0.00 2.40
2347 4181 0.043334 AGGGGATGCAGTAGTCCACT 59.957 55.000 2.82 2.82 43.40 4.00
2348 4182 1.789523 TAGGGGATGCAGTAGTCCAC 58.210 55.000 6.42 2.24 38.23 4.02
2349 4183 2.561209 TTAGGGGATGCAGTAGTCCA 57.439 50.000 6.42 0.00 36.19 4.02
2350 4184 3.926058 TTTTAGGGGATGCAGTAGTCC 57.074 47.619 0.00 0.00 0.00 3.85
2409 4244 2.184533 TGGAATTTCTAGAGACCGCCA 58.815 47.619 0.00 0.00 0.00 5.69
2410 4245 2.981859 TGGAATTTCTAGAGACCGCC 57.018 50.000 0.00 0.00 0.00 6.13
2462 4298 8.386264 TCCTCCTCTCACTTTCTTTGATTTTAT 58.614 33.333 0.00 0.00 0.00 1.40
2464 4300 6.605119 TCCTCCTCTCACTTTCTTTGATTTT 58.395 36.000 0.00 0.00 0.00 1.82
2469 4305 4.322567 CCTTCCTCCTCTCACTTTCTTTG 58.677 47.826 0.00 0.00 0.00 2.77
2499 4336 4.937015 GCACGGGTTCCTACACTATTAAAA 59.063 41.667 0.00 0.00 0.00 1.52
2503 4340 1.134907 CGCACGGGTTCCTACACTATT 60.135 52.381 0.00 0.00 0.00 1.73
2504 4341 0.458669 CGCACGGGTTCCTACACTAT 59.541 55.000 0.00 0.00 0.00 2.12
2505 4342 0.895100 ACGCACGGGTTCCTACACTA 60.895 55.000 0.00 0.00 0.00 2.74
2507 4344 1.301165 AACGCACGGGTTCCTACAC 60.301 57.895 0.00 0.00 0.00 2.90
2512 4351 3.587933 TTGCAACGCACGGGTTCC 61.588 61.111 0.00 0.00 38.71 3.62
2513 4352 2.353030 GTTGCAACGCACGGGTTC 60.353 61.111 14.90 0.00 38.71 3.62
2514 4353 3.119709 CTGTTGCAACGCACGGGTT 62.120 57.895 23.79 0.00 38.71 4.11
2545 4385 6.747125 TCGTATGGCCGACTTATATGTTTAA 58.253 36.000 0.00 0.00 30.63 1.52
2548 4388 4.859304 TCGTATGGCCGACTTATATGTT 57.141 40.909 0.00 0.00 30.63 2.71
2560 4400 5.617751 GCATCAAGATTTGTATCGTATGGCC 60.618 44.000 0.00 0.00 35.85 5.36
2561 4401 5.049474 TGCATCAAGATTTGTATCGTATGGC 60.049 40.000 0.00 0.00 35.85 4.40
2566 4406 9.853555 TTTATTTTGCATCAAGATTTGTATCGT 57.146 25.926 0.00 0.00 35.85 3.73
2731 5742 9.190858 GTGTCAATAAATTCACAATTGTAAGCA 57.809 29.630 11.53 0.00 33.35 3.91
2732 5743 9.410556 AGTGTCAATAAATTCACAATTGTAAGC 57.589 29.630 11.53 0.00 33.35 3.09
2819 5830 6.938030 GGGTATATCAATAAATTCACGGTCCA 59.062 38.462 0.00 0.00 0.00 4.02
2878 5963 3.070734 CCCATTTGGTTTTCATCACACCA 59.929 43.478 0.00 0.00 38.89 4.17
2879 5964 3.556843 CCCCATTTGGTTTTCATCACACC 60.557 47.826 0.00 0.00 0.00 4.16
2880 5965 3.556843 CCCCCATTTGGTTTTCATCACAC 60.557 47.826 0.00 0.00 0.00 3.82
2881 5966 2.636893 CCCCCATTTGGTTTTCATCACA 59.363 45.455 0.00 0.00 0.00 3.58
2882 5967 2.637382 ACCCCCATTTGGTTTTCATCAC 59.363 45.455 0.00 0.00 29.75 3.06
2883 5968 2.636893 CACCCCCATTTGGTTTTCATCA 59.363 45.455 0.00 0.00 32.46 3.07
2884 5969 2.903135 TCACCCCCATTTGGTTTTCATC 59.097 45.455 0.00 0.00 32.46 2.92
2885 5970 2.983296 TCACCCCCATTTGGTTTTCAT 58.017 42.857 0.00 0.00 32.46 2.57
2886 5971 2.478872 TCACCCCCATTTGGTTTTCA 57.521 45.000 0.00 0.00 32.46 2.69
2887 5972 3.847671 TTTCACCCCCATTTGGTTTTC 57.152 42.857 0.00 0.00 32.46 2.29
2888 5973 4.274147 GTTTTTCACCCCCATTTGGTTTT 58.726 39.130 0.00 0.00 32.46 2.43
2889 5974 3.372133 GGTTTTTCACCCCCATTTGGTTT 60.372 43.478 0.00 0.00 40.19 3.27
2890 5975 2.173782 GGTTTTTCACCCCCATTTGGTT 59.826 45.455 0.00 0.00 40.19 3.67
2891 5976 1.771854 GGTTTTTCACCCCCATTTGGT 59.228 47.619 0.00 0.00 40.19 3.67
2892 5977 1.270571 CGGTTTTTCACCCCCATTTGG 60.271 52.381 0.00 0.00 43.83 3.28
2893 5978 1.270571 CCGGTTTTTCACCCCCATTTG 60.271 52.381 0.00 0.00 43.83 2.32
2894 5979 1.052617 CCGGTTTTTCACCCCCATTT 58.947 50.000 0.00 0.00 43.83 2.32
2895 5980 0.188834 TCCGGTTTTTCACCCCCATT 59.811 50.000 0.00 0.00 43.83 3.16
2896 5981 0.188834 TTCCGGTTTTTCACCCCCAT 59.811 50.000 0.00 0.00 43.83 4.00
2897 5982 0.032416 TTTCCGGTTTTTCACCCCCA 60.032 50.000 0.00 0.00 43.83 4.96
2898 5983 1.121378 TTTTCCGGTTTTTCACCCCC 58.879 50.000 0.00 0.00 43.83 5.40
2899 5984 2.983907 TTTTTCCGGTTTTTCACCCC 57.016 45.000 0.00 0.00 43.83 4.95
2917 6002 5.248640 TCCTTCTGCTCTTCATCGATTTTT 58.751 37.500 0.00 0.00 0.00 1.94
2918 6003 4.836825 TCCTTCTGCTCTTCATCGATTTT 58.163 39.130 0.00 0.00 0.00 1.82
2919 6004 4.478206 TCCTTCTGCTCTTCATCGATTT 57.522 40.909 0.00 0.00 0.00 2.17
2920 6005 4.378774 CATCCTTCTGCTCTTCATCGATT 58.621 43.478 0.00 0.00 0.00 3.34
2921 6006 3.244146 CCATCCTTCTGCTCTTCATCGAT 60.244 47.826 0.00 0.00 0.00 3.59
2922 6007 2.102084 CCATCCTTCTGCTCTTCATCGA 59.898 50.000 0.00 0.00 0.00 3.59
2923 6008 2.102084 TCCATCCTTCTGCTCTTCATCG 59.898 50.000 0.00 0.00 0.00 3.84
2924 6009 3.834489 TCCATCCTTCTGCTCTTCATC 57.166 47.619 0.00 0.00 0.00 2.92
2925 6010 3.715315 TCATCCATCCTTCTGCTCTTCAT 59.285 43.478 0.00 0.00 0.00 2.57
2926 6011 3.109928 TCATCCATCCTTCTGCTCTTCA 58.890 45.455 0.00 0.00 0.00 3.02
2927 6012 3.834489 TCATCCATCCTTCTGCTCTTC 57.166 47.619 0.00 0.00 0.00 2.87
2928 6013 3.779183 TCTTCATCCATCCTTCTGCTCTT 59.221 43.478 0.00 0.00 0.00 2.85
2929 6014 3.382278 TCTTCATCCATCCTTCTGCTCT 58.618 45.455 0.00 0.00 0.00 4.09
2930 6015 3.494749 CCTCTTCATCCATCCTTCTGCTC 60.495 52.174 0.00 0.00 0.00 4.26
2931 6016 2.438763 CCTCTTCATCCATCCTTCTGCT 59.561 50.000 0.00 0.00 0.00 4.24
2932 6017 2.172293 ACCTCTTCATCCATCCTTCTGC 59.828 50.000 0.00 0.00 0.00 4.26
2933 6018 3.433314 CCACCTCTTCATCCATCCTTCTG 60.433 52.174 0.00 0.00 0.00 3.02
2934 6019 2.776536 CCACCTCTTCATCCATCCTTCT 59.223 50.000 0.00 0.00 0.00 2.85
2935 6020 2.507471 ACCACCTCTTCATCCATCCTTC 59.493 50.000 0.00 0.00 0.00 3.46
2936 6021 2.240667 CACCACCTCTTCATCCATCCTT 59.759 50.000 0.00 0.00 0.00 3.36
2937 6022 1.842562 CACCACCTCTTCATCCATCCT 59.157 52.381 0.00 0.00 0.00 3.24
2938 6023 1.133976 CCACCACCTCTTCATCCATCC 60.134 57.143 0.00 0.00 0.00 3.51
2939 6024 1.133976 CCCACCACCTCTTCATCCATC 60.134 57.143 0.00 0.00 0.00 3.51
2940 6025 0.921896 CCCACCACCTCTTCATCCAT 59.078 55.000 0.00 0.00 0.00 3.41
2941 6026 1.207488 CCCCACCACCTCTTCATCCA 61.207 60.000 0.00 0.00 0.00 3.41
2942 6027 0.914417 TCCCCACCACCTCTTCATCC 60.914 60.000 0.00 0.00 0.00 3.51
2943 6028 0.543749 CTCCCCACCACCTCTTCATC 59.456 60.000 0.00 0.00 0.00 2.92
2944 6029 0.119155 TCTCCCCACCACCTCTTCAT 59.881 55.000 0.00 0.00 0.00 2.57
2945 6030 0.104672 TTCTCCCCACCACCTCTTCA 60.105 55.000 0.00 0.00 0.00 3.02
2946 6031 1.064825 TTTCTCCCCACCACCTCTTC 58.935 55.000 0.00 0.00 0.00 2.87
2947 6032 1.529744 TTTTCTCCCCACCACCTCTT 58.470 50.000 0.00 0.00 0.00 2.85
2948 6033 1.529744 TTTTTCTCCCCACCACCTCT 58.470 50.000 0.00 0.00 0.00 3.69
2949 6034 2.562738 CAATTTTTCTCCCCACCACCTC 59.437 50.000 0.00 0.00 0.00 3.85
2950 6035 2.178984 TCAATTTTTCTCCCCACCACCT 59.821 45.455 0.00 0.00 0.00 4.00
2951 6036 2.299013 GTCAATTTTTCTCCCCACCACC 59.701 50.000 0.00 0.00 0.00 4.61
2963 6048 5.175127 AGGTTTCAACTTGCGTCAATTTTT 58.825 33.333 0.00 0.00 0.00 1.94
2967 6052 5.705609 ATAAGGTTTCAACTTGCGTCAAT 57.294 34.783 0.00 0.00 0.00 2.57
3009 6094 9.442047 GGATAGAAAGAACAAGAAATCTCTTCA 57.558 33.333 4.51 0.00 40.05 3.02
3042 6127 9.032624 ACGGGCATTGTTCTAGTACTATATAAT 57.967 33.333 2.33 2.76 0.00 1.28
3043 6128 8.301720 CACGGGCATTGTTCTAGTACTATATAA 58.698 37.037 2.33 0.50 0.00 0.98
3044 6129 7.576287 GCACGGGCATTGTTCTAGTACTATATA 60.576 40.741 3.77 0.00 40.72 0.86
3045 6130 6.688578 CACGGGCATTGTTCTAGTACTATAT 58.311 40.000 2.33 0.00 0.00 0.86
3046 6131 5.508489 GCACGGGCATTGTTCTAGTACTATA 60.508 44.000 3.77 0.00 40.72 1.31
3047 6132 4.739735 GCACGGGCATTGTTCTAGTACTAT 60.740 45.833 3.77 0.00 40.72 2.12
3048 6133 3.429822 GCACGGGCATTGTTCTAGTACTA 60.430 47.826 3.77 1.89 40.72 1.82
3049 6134 2.677037 GCACGGGCATTGTTCTAGTACT 60.677 50.000 3.77 0.00 40.72 2.73
3050 6135 1.664151 GCACGGGCATTGTTCTAGTAC 59.336 52.381 3.77 0.00 40.72 2.73
3051 6136 1.737696 CGCACGGGCATTGTTCTAGTA 60.738 52.381 11.77 0.00 41.24 1.82
3052 6137 1.019278 CGCACGGGCATTGTTCTAGT 61.019 55.000 11.77 0.00 41.24 2.57
3053 6138 1.019278 ACGCACGGGCATTGTTCTAG 61.019 55.000 11.77 0.00 41.24 2.43
3054 6139 0.604243 AACGCACGGGCATTGTTCTA 60.604 50.000 11.77 0.00 41.24 2.10
3055 6140 1.896660 AACGCACGGGCATTGTTCT 60.897 52.632 11.77 0.00 41.24 3.01
3056 6141 1.729131 CAACGCACGGGCATTGTTC 60.729 57.895 10.90 0.00 38.34 3.18
3057 6142 2.334653 CAACGCACGGGCATTGTT 59.665 55.556 10.90 2.50 38.34 2.83
3058 6143 4.341502 GCAACGCACGGGCATTGT 62.342 61.111 20.63 0.74 44.58 2.71
3059 6144 3.837908 TTGCAACGCACGGGCATTG 62.838 57.895 15.24 15.24 45.48 2.82
3060 6145 3.600694 TTGCAACGCACGGGCATT 61.601 55.556 11.77 0.00 38.71 3.56
3061 6146 4.341502 GTTGCAACGCACGGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
3071 6156 9.216117 ACTAGAATATTTATATCCCGTTGCAAC 57.784 33.333 19.89 19.89 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.