Multiple sequence alignment - TraesCS7A01G420400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G420400 chr7A 100.000 3150 0 0 1 3150 611806311 611803162 0.000000e+00 5818.0
1 TraesCS7A01G420400 chr7A 90.851 470 34 3 1495 1955 612029017 612028548 3.450000e-174 621.0
2 TraesCS7A01G420400 chr7A 88.391 379 34 5 2062 2435 612026305 612025932 6.200000e-122 448.0
3 TraesCS7A01G420400 chr7A 83.012 259 35 5 2576 2830 487717617 487717870 3.160000e-55 226.0
4 TraesCS7A01G420400 chr7A 90.083 121 9 2 1947 2064 612027537 612027417 1.510000e-33 154.0
5 TraesCS7A01G420400 chr7A 84.932 146 11 7 804 939 612030818 612030674 1.520000e-28 137.0
6 TraesCS7A01G420400 chr7A 83.721 129 12 3 1380 1503 612029169 612029045 2.570000e-21 113.0
7 TraesCS7A01G420400 chr7D 85.107 2189 185 64 257 2406 531581195 531579109 0.000000e+00 2106.0
8 TraesCS7A01G420400 chr7D 83.007 459 67 7 257 706 543087179 543087635 3.780000e-109 405.0
9 TraesCS7A01G420400 chr7D 92.913 254 16 1 3 254 433779970 433780223 4.960000e-98 368.0
10 TraesCS7A01G420400 chr7D 90.980 255 20 3 1 254 531582120 531581868 1.080000e-89 340.0
11 TraesCS7A01G420400 chr7D 90.514 253 22 1 3 253 454068634 454068382 1.810000e-87 333.0
12 TraesCS7A01G420400 chr7B 87.553 940 75 24 1495 2406 571893076 571892151 0.000000e+00 1050.0
13 TraesCS7A01G420400 chr7B 85.507 276 21 11 2574 2832 418045026 418044753 1.440000e-68 270.0
14 TraesCS7A01G420400 chr7B 83.895 267 32 8 2575 2831 47729305 47729040 8.730000e-61 244.0
15 TraesCS7A01G420400 chr7B 81.919 271 26 12 866 1131 571893770 571893518 1.150000e-49 207.0
16 TraesCS7A01G420400 chr7B 87.975 158 14 2 2400 2557 571891947 571891795 6.940000e-42 182.0
17 TraesCS7A01G420400 chr7B 81.364 220 25 5 2576 2791 465217625 465217832 6.990000e-37 165.0
18 TraesCS7A01G420400 chr7B 86.047 129 9 3 1380 1503 571893228 571893104 2.550000e-26 130.0
19 TraesCS7A01G420400 chr2B 84.016 513 70 8 257 763 471323849 471323343 1.700000e-132 483.0
20 TraesCS7A01G420400 chr2B 85.199 277 19 11 2576 2832 16197490 16197764 6.700000e-67 265.0
21 TraesCS7A01G420400 chr2B 84.892 278 20 11 2575 2832 110066738 110066463 8.670000e-66 261.0
22 TraesCS7A01G420400 chr2B 100.000 28 0 0 2940 2967 688463077 688463104 6.000000e-03 52.8
23 TraesCS7A01G420400 chr3D 86.292 445 58 3 257 700 55161068 55161510 6.110000e-132 481.0
24 TraesCS7A01G420400 chr2A 83.200 500 78 6 261 757 739132437 739131941 1.330000e-123 453.0
25 TraesCS7A01G420400 chr2A 91.732 254 19 1 3 254 75609160 75608907 5.000000e-93 351.0
26 TraesCS7A01G420400 chr2A 96.970 33 1 0 2937 2969 333732755 333732723 4.390000e-04 56.5
27 TraesCS7A01G420400 chr2A 100.000 28 0 0 2940 2967 711980316 711980343 6.000000e-03 52.8
28 TraesCS7A01G420400 chr3B 82.869 502 81 4 258 757 762409771 762409273 2.230000e-121 446.0
29 TraesCS7A01G420400 chr3B 84.674 261 33 6 2576 2831 813465853 813466111 1.450000e-63 254.0
30 TraesCS7A01G420400 chr3B 86.441 236 26 5 2601 2831 813590521 813590755 1.450000e-63 254.0
31 TraesCS7A01G420400 chr3B 96.703 91 1 2 2576 2665 239917404 239917493 1.960000e-32 150.0
32 TraesCS7A01G420400 chr3B 85.294 68 9 1 675 741 714970388 714970455 5.640000e-08 69.4
33 TraesCS7A01G420400 chr3A 84.701 451 60 6 258 706 399702544 399702101 2.880000e-120 442.0
34 TraesCS7A01G420400 chr3A 77.273 264 46 10 2577 2831 489314521 489314779 3.280000e-30 143.0
35 TraesCS7A01G420400 chr3A 79.592 98 13 5 666 758 545884051 545884146 2.620000e-06 63.9
36 TraesCS7A01G420400 chr6B 83.125 480 73 7 257 732 686197773 686198248 6.240000e-117 431.0
37 TraesCS7A01G420400 chr6B 82.593 270 30 9 2575 2831 153754587 153754322 4.090000e-54 222.0
38 TraesCS7A01G420400 chr2D 82.306 503 82 4 257 758 600134948 600134452 2.240000e-116 429.0
39 TraesCS7A01G420400 chr1D 91.339 254 20 1 3 254 38362211 38362464 2.330000e-91 346.0
40 TraesCS7A01G420400 chr5B 91.270 252 19 2 6 255 354726446 354726196 1.080000e-89 340.0
41 TraesCS7A01G420400 chr5B 83.395 271 29 5 2576 2831 605958127 605957858 1.460000e-58 237.0
42 TraesCS7A01G420400 chr4D 90.945 254 21 2 3 254 346146622 346146875 1.080000e-89 340.0
43 TraesCS7A01G420400 chr4D 97.059 34 0 1 2940 2972 9338714 9338747 4.390000e-04 56.5
44 TraesCS7A01G420400 chr6A 90.588 255 21 2 3 254 585087738 585087992 5.030000e-88 335.0
45 TraesCS7A01G420400 chr6A 78.646 192 32 7 2950 3132 13354796 13354987 5.520000e-23 119.0
46 TraesCS7A01G420400 chr1A 90.551 254 20 3 3 254 547422962 547423213 1.810000e-87 333.0
47 TraesCS7A01G420400 chr4B 86.861 274 18 8 2576 2832 299556250 299555978 1.110000e-74 291.0
48 TraesCS7A01G420400 chr4B 83.969 262 32 6 2575 2832 667261052 667261307 3.140000e-60 243.0
49 TraesCS7A01G420400 chrUn 83.942 274 25 8 2577 2833 305306084 305305813 8.730000e-61 244.0
50 TraesCS7A01G420400 chr4A 100.000 28 0 0 2940 2967 57517791 57517818 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G420400 chr7A 611803162 611806311 3149 True 5818.00 5818 100.0000 1 3150 1 chr7A.!!$R1 3149
1 TraesCS7A01G420400 chr7A 612025932 612030818 4886 True 294.60 621 87.5956 804 2435 5 chr7A.!!$R2 1631
2 TraesCS7A01G420400 chr7D 531579109 531582120 3011 True 1223.00 2106 88.0435 1 2406 2 chr7D.!!$R2 2405
3 TraesCS7A01G420400 chr7B 571891795 571893770 1975 True 392.25 1050 85.8735 866 2557 4 chr7B.!!$R3 1691
4 TraesCS7A01G420400 chr2B 471323343 471323849 506 True 483.00 483 84.0160 257 763 1 chr2B.!!$R2 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.175760 GCCCTACTCTGACGCATTGA 59.824 55.0 0.0 0.0 0.0 2.57 F
1132 2883 0.107456 CCACCAATCATCCTCCTCCG 59.893 60.0 0.0 0.0 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1950 4863 0.110486 GGAACTTCCTTGGTCAGCCA 59.890 55.0 0.00 0.0 44.38 4.75 R
2925 7198 0.039035 GCCCTTGTACAATCCCCACA 59.961 55.0 9.13 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.500369 GCTGTTGTGCGACGCATG 60.500 61.111 27.23 14.28 41.91 4.06
34 35 2.174107 CTGTTGTGCGACGCATGG 59.826 61.111 27.23 10.48 41.91 3.66
57 58 0.747255 GCAACTAGCCTCGATCCTGA 59.253 55.000 0.00 0.00 37.23 3.86
64 65 1.690219 GCCTCGATCCTGACCATGGT 61.690 60.000 19.89 19.89 0.00 3.55
65 66 1.704641 CCTCGATCCTGACCATGGTA 58.295 55.000 19.80 1.52 0.00 3.25
113 114 5.769835 AGGAACATTCACATATGGTTCCAT 58.230 37.500 28.06 17.41 37.72 3.41
130 131 1.265568 CATGAGCACAAGCATTTCGC 58.734 50.000 0.00 0.00 45.49 4.70
139 140 3.014856 GCATTTCGCGCCCTACTC 58.985 61.111 0.00 0.00 0.00 2.59
140 141 1.521681 GCATTTCGCGCCCTACTCT 60.522 57.895 0.00 0.00 0.00 3.24
150 151 0.175760 GCCCTACTCTGACGCATTGA 59.824 55.000 0.00 0.00 0.00 2.57
153 154 2.546795 CCCTACTCTGACGCATTGATCC 60.547 54.545 0.00 0.00 0.00 3.36
154 155 2.363680 CCTACTCTGACGCATTGATCCT 59.636 50.000 0.00 0.00 0.00 3.24
159 160 2.234661 TCTGACGCATTGATCCTCAACT 59.765 45.455 0.00 0.00 39.45 3.16
173 174 3.391506 CTCAACTGTGAGTGGATGTCA 57.608 47.619 0.00 0.00 45.44 3.58
251 252 0.534427 AGCATCTCATCGCATGGTGG 60.534 55.000 0.00 0.00 29.56 4.61
254 255 1.986632 ATCTCATCGCATGGTGGCCA 61.987 55.000 0.00 0.00 38.19 5.36
255 256 1.527611 CTCATCGCATGGTGGCCAT 60.528 57.895 9.72 0.00 46.37 4.40
313 984 2.370281 TCGACTCTTTGGATGCTGAC 57.630 50.000 0.00 0.00 0.00 3.51
314 985 1.618343 TCGACTCTTTGGATGCTGACA 59.382 47.619 0.00 0.00 0.00 3.58
315 986 2.234661 TCGACTCTTTGGATGCTGACAT 59.765 45.455 0.00 0.00 39.98 3.06
328 999 8.669946 TGGATGCTGACATTAAAATTATCGTA 57.330 30.769 0.00 0.00 36.35 3.43
340 1011 3.996150 ATTATCGTACAATCCGTCCGT 57.004 42.857 0.00 0.00 0.00 4.69
397 1068 2.109126 GGTGCAAGATGAGGACGCC 61.109 63.158 0.00 0.00 0.00 5.68
417 1088 2.603776 GGAGGTGGAGGTGGACGT 60.604 66.667 0.00 0.00 0.00 4.34
436 1107 1.122632 TGGACACGGAGGTTGCCTAA 61.123 55.000 0.00 0.00 31.76 2.69
443 1114 4.778143 AGGTTGCCTAAGCCGCGG 62.778 66.667 24.05 24.05 38.69 6.46
551 1223 5.186797 TCTTTTGGATTCCGGCATGTAAAAT 59.813 36.000 0.00 0.00 0.00 1.82
583 1255 4.686191 TTGCCTCATTTTGGTTGTGATT 57.314 36.364 0.00 0.00 0.00 2.57
588 1260 3.312890 TCATTTTGGTTGTGATTGGGGT 58.687 40.909 0.00 0.00 0.00 4.95
596 1268 0.327924 TGTGATTGGGGTTGCGATCT 59.672 50.000 0.00 0.00 0.00 2.75
627 1299 3.876198 GCTGGCGCGTTATGTGGG 61.876 66.667 8.43 0.00 0.00 4.61
633 1305 2.798501 CGCGTTATGTGGGTCAGCG 61.799 63.158 0.00 0.00 40.14 5.18
640 1312 2.315925 ATGTGGGTCAGCGTAGATTG 57.684 50.000 0.00 0.00 0.00 2.67
641 1313 0.249120 TGTGGGTCAGCGTAGATTGG 59.751 55.000 0.00 0.00 0.00 3.16
645 1317 3.035363 TGGGTCAGCGTAGATTGGAATA 58.965 45.455 0.00 0.00 0.00 1.75
706 1378 3.112205 GCCTCCCGCATCCATGTCT 62.112 63.158 0.00 0.00 37.47 3.41
708 1380 1.524002 CTCCCGCATCCATGTCTGT 59.476 57.895 0.00 0.00 0.00 3.41
710 1382 1.221566 CCCGCATCCATGTCTGTGA 59.778 57.895 6.83 0.00 0.00 3.58
727 1421 1.546476 GTGAACTGATCCTCTGTCCGT 59.454 52.381 0.00 0.00 0.00 4.69
729 1423 1.819288 GAACTGATCCTCTGTCCGTGA 59.181 52.381 0.00 0.00 0.00 4.35
733 1427 0.809385 GATCCTCTGTCCGTGAACGA 59.191 55.000 4.03 0.00 43.02 3.85
741 1435 4.160635 CCGTGAACGAATGCGGGC 62.161 66.667 4.03 0.00 43.17 6.13
786 1481 5.106673 GCCGTTATAGATGCCCTTATTCAAC 60.107 44.000 0.00 0.00 0.00 3.18
859 1557 1.197721 CTTGATTGACACTTGACCCGC 59.802 52.381 0.00 0.00 0.00 6.13
896 1594 1.379443 ACGCCTCCATCAGTCCGTA 60.379 57.895 0.00 0.00 0.00 4.02
939 1643 3.089784 CGCACATCAACCTACCGC 58.910 61.111 0.00 0.00 0.00 5.68
985 2710 3.974222 CGTTATTACGGACCCCTCC 57.026 57.895 0.00 0.00 43.94 4.30
1030 2762 1.265635 CGAACGAAAAGCATTCCACCA 59.734 47.619 0.00 0.00 0.00 4.17
1093 2825 0.375803 ACACGAAAACGTTGCTGGTC 59.624 50.000 0.00 0.00 0.00 4.02
1104 2836 1.434513 TTGCTGGTCATTCCCCACCT 61.435 55.000 0.00 0.00 33.36 4.00
1132 2883 0.107456 CCACCAATCATCCTCCTCCG 59.893 60.000 0.00 0.00 0.00 4.63
1133 2884 0.107456 CACCAATCATCCTCCTCCGG 59.893 60.000 0.00 0.00 0.00 5.14
1210 2965 0.394938 TGCGGGTAAGCTCAACTCAA 59.605 50.000 0.00 0.00 38.13 3.02
1211 2966 1.079503 GCGGGTAAGCTCAACTCAAG 58.920 55.000 0.00 0.00 0.00 3.02
1217 2972 4.393693 GCTCAACTCAAGCTGGCT 57.606 55.556 0.00 0.00 36.80 4.75
1218 2973 1.874562 GCTCAACTCAAGCTGGCTG 59.125 57.895 0.00 0.00 36.80 4.85
1219 2974 1.584380 GCTCAACTCAAGCTGGCTGG 61.584 60.000 0.00 0.00 36.80 4.85
1220 2975 1.584380 CTCAACTCAAGCTGGCTGGC 61.584 60.000 0.00 0.00 0.00 4.85
1221 2976 2.282745 AACTCAAGCTGGCTGGCC 60.283 61.111 4.43 4.43 0.00 5.36
1222 2977 2.838467 AACTCAAGCTGGCTGGCCT 61.838 57.895 13.05 0.00 36.94 5.19
1223 2978 2.750637 CTCAAGCTGGCTGGCCTG 60.751 66.667 13.05 13.06 37.98 4.85
1224 2979 3.564345 CTCAAGCTGGCTGGCCTGT 62.564 63.158 17.38 4.63 37.37 4.00
1225 2980 2.599578 CAAGCTGGCTGGCCTGTT 60.600 61.111 17.38 10.48 37.37 3.16
1226 2981 2.282745 AAGCTGGCTGGCCTGTTC 60.283 61.111 17.38 4.98 37.37 3.18
1227 2982 3.137385 AAGCTGGCTGGCCTGTTCA 62.137 57.895 17.38 9.17 37.37 3.18
1228 2983 2.362120 GCTGGCTGGCCTGTTCAT 60.362 61.111 17.38 0.00 37.37 2.57
1229 2984 1.980772 GCTGGCTGGCCTGTTCATT 60.981 57.895 17.38 0.00 37.37 2.57
1230 2985 1.941999 GCTGGCTGGCCTGTTCATTC 61.942 60.000 17.38 2.67 37.37 2.67
1231 2986 1.651240 CTGGCTGGCCTGTTCATTCG 61.651 60.000 11.69 0.00 36.94 3.34
1235 2990 1.363744 CTGGCCTGTTCATTCGTCTC 58.636 55.000 3.32 0.00 0.00 3.36
1257 3012 2.879026 AGCTTGTTCTTCGTTTTCCTCC 59.121 45.455 0.00 0.00 0.00 4.30
1262 3017 2.457366 TCTTCGTTTTCCTCCTGCTC 57.543 50.000 0.00 0.00 0.00 4.26
1313 3069 0.183492 ACCAATCATCATCGGTGGGG 59.817 55.000 0.00 0.00 33.43 4.96
1314 3070 0.538057 CCAATCATCATCGGTGGGGG 60.538 60.000 0.00 0.00 0.00 5.40
1342 3098 2.024918 ATGCCGTCGATTGCATTCC 58.975 52.632 16.20 0.00 45.52 3.01
1362 3118 7.650890 CATTCCATTACCGAATGAATGAATGA 58.349 34.615 15.60 0.00 46.27 2.57
1364 3120 7.822161 TCCATTACCGAATGAATGAATGAAT 57.178 32.000 0.00 0.00 44.59 2.57
1367 3123 8.136800 CCATTACCGAATGAATGAATGAATGAA 58.863 33.333 0.00 0.00 44.59 2.57
1368 3124 9.687210 CATTACCGAATGAATGAATGAATGAAT 57.313 29.630 0.00 0.00 44.59 2.57
1369 3125 9.687210 ATTACCGAATGAATGAATGAATGAATG 57.313 29.630 0.00 0.00 0.00 2.67
1370 3126 7.337480 ACCGAATGAATGAATGAATGAATGA 57.663 32.000 0.00 0.00 0.00 2.57
1371 3127 7.774134 ACCGAATGAATGAATGAATGAATGAA 58.226 30.769 0.00 0.00 0.00 2.57
1372 3128 8.252417 ACCGAATGAATGAATGAATGAATGAAA 58.748 29.630 0.00 0.00 0.00 2.69
1373 3129 9.089601 CCGAATGAATGAATGAATGAATGAAAA 57.910 29.630 0.00 0.00 0.00 2.29
1409 3253 3.575630 AGCATCTTATACATGCCGTACG 58.424 45.455 8.69 8.69 46.76 3.67
1410 3254 3.005472 AGCATCTTATACATGCCGTACGT 59.995 43.478 15.21 0.00 46.76 3.57
1510 3395 0.392998 CGGCCATGGACAGCTACTTT 60.393 55.000 20.22 0.00 0.00 2.66
1529 3414 2.743636 TGACGACATCCTGAAAGACC 57.256 50.000 0.00 0.00 34.07 3.85
1537 3428 1.376037 CCTGAAAGACCCGGAGCAC 60.376 63.158 0.73 0.00 34.07 4.40
1658 3549 0.676736 GGAGGAGTCGGATGATGTCC 59.323 60.000 0.00 0.00 44.10 4.02
1765 3659 1.122019 AGAAGAAGGCCCACACGACT 61.122 55.000 0.00 0.00 0.00 4.18
1900 3794 2.226912 CGACATTAGAGGGAGGATCGAC 59.773 54.545 0.00 0.00 34.37 4.20
1925 3819 1.616159 GCTTGGTGCTTTCCCTTACA 58.384 50.000 0.00 0.00 38.95 2.41
1933 3827 0.608035 CTTTCCCTTACAAGCGGCCA 60.608 55.000 2.24 0.00 0.00 5.36
1945 3839 0.886490 AGCGGCCAGTGAAGAACAAG 60.886 55.000 2.24 0.00 0.00 3.16
1950 4863 2.893489 GGCCAGTGAAGAACAAGGATTT 59.107 45.455 0.00 0.00 0.00 2.17
1968 4881 3.725754 TGGCTGACCAAGGAAGTTC 57.274 52.632 0.00 0.00 45.37 3.01
1983 4899 4.278513 TTCCCTTGGTGGTGCCCG 62.279 66.667 0.00 0.00 36.04 6.13
2013 4929 1.493950 CTCAGATGCAACGATCCGCC 61.494 60.000 0.00 0.00 0.00 6.13
2040 4956 0.987081 AGTCCAGAGATGCAGGCCAT 60.987 55.000 5.01 0.00 36.70 4.40
2075 6105 4.162072 CGATGATGTTATGAGTAGCGAGG 58.838 47.826 0.00 0.00 0.00 4.63
2107 6137 1.469079 GGTGCCGGTGATATTGCAAAC 60.469 52.381 1.71 0.00 35.16 2.93
2121 6151 1.391157 GCAAACAACCAGTGGCTCCA 61.391 55.000 9.78 0.00 0.00 3.86
2193 6228 7.807977 ATCTTGTGTGTTCTGTAGACAAAAT 57.192 32.000 0.00 0.00 32.00 1.82
2285 6347 4.021544 TCAATTTCGGGCAATAAACTGCTT 60.022 37.500 0.00 0.00 42.25 3.91
2303 6365 4.207165 TGCTTGTTTACTTCTGCCTTTCT 58.793 39.130 0.00 0.00 0.00 2.52
2376 6438 3.118149 CCAGGGAATGATCATCAGTGTGA 60.118 47.826 9.06 0.00 0.00 3.58
2429 6702 7.924947 CACTCTGTTCATTCATTCTGATAGCTA 59.075 37.037 0.00 0.00 0.00 3.32
2475 6748 4.176271 GCCTTGCCATACTTTTGATTGTC 58.824 43.478 0.00 0.00 0.00 3.18
2482 6755 6.945435 TGCCATACTTTTGATTGTCCTTTAGA 59.055 34.615 0.00 0.00 0.00 2.10
2499 6772 6.013206 TCCTTTAGACTGTTTTATAGTGGGCA 60.013 38.462 0.00 0.00 0.00 5.36
2538 6811 8.969260 TTCATTAGTATGTGCATCTGATTCTT 57.031 30.769 0.00 0.00 33.34 2.52
2539 6812 8.599055 TCATTAGTATGTGCATCTGATTCTTC 57.401 34.615 0.00 0.00 33.34 2.87
2542 6815 5.121811 AGTATGTGCATCTGATTCTTCACC 58.878 41.667 0.00 0.00 0.00 4.02
2557 6830 4.298626 TCTTCACCTGGGAATAGTATGCT 58.701 43.478 0.00 0.00 0.00 3.79
2558 6831 5.464069 TCTTCACCTGGGAATAGTATGCTA 58.536 41.667 0.00 0.00 0.00 3.49
2559 6832 5.903010 TCTTCACCTGGGAATAGTATGCTAA 59.097 40.000 0.00 0.00 0.00 3.09
2560 6833 5.808366 TCACCTGGGAATAGTATGCTAAG 57.192 43.478 0.00 0.00 0.00 2.18
2561 6834 5.216622 TCACCTGGGAATAGTATGCTAAGT 58.783 41.667 0.00 0.00 0.00 2.24
2562 6835 6.378745 TCACCTGGGAATAGTATGCTAAGTA 58.621 40.000 0.00 0.00 0.00 2.24
2563 6836 7.016914 TCACCTGGGAATAGTATGCTAAGTAT 58.983 38.462 0.00 0.00 0.00 2.12
2564 6837 8.174757 TCACCTGGGAATAGTATGCTAAGTATA 58.825 37.037 0.00 0.00 0.00 1.47
2565 6838 8.470805 CACCTGGGAATAGTATGCTAAGTATAG 58.529 40.741 0.00 0.00 0.00 1.31
2566 6839 8.178132 ACCTGGGAATAGTATGCTAAGTATAGT 58.822 37.037 0.00 0.00 0.00 2.12
2567 6840 8.470805 CCTGGGAATAGTATGCTAAGTATAGTG 58.529 40.741 0.00 0.00 0.00 2.74
2568 6841 9.244292 CTGGGAATAGTATGCTAAGTATAGTGA 57.756 37.037 0.00 0.00 0.00 3.41
2569 6842 9.769677 TGGGAATAGTATGCTAAGTATAGTGAT 57.230 33.333 0.00 0.00 0.00 3.06
2585 6858 9.166222 AGTATAGTGATGACATATTAAACCCCA 57.834 33.333 0.00 0.00 0.00 4.96
2586 6859 9.959721 GTATAGTGATGACATATTAAACCCCAT 57.040 33.333 0.00 0.00 0.00 4.00
2590 6863 9.354673 AGTGATGACATATTAAACCCCATTAAG 57.645 33.333 0.00 0.00 0.00 1.85
2591 6864 9.349713 GTGATGACATATTAAACCCCATTAAGA 57.650 33.333 0.00 0.00 0.00 2.10
2592 6865 9.573166 TGATGACATATTAAACCCCATTAAGAG 57.427 33.333 0.00 0.00 0.00 2.85
2593 6866 8.940397 ATGACATATTAAACCCCATTAAGAGG 57.060 34.615 0.00 0.00 0.00 3.69
2594 6867 6.775629 TGACATATTAAACCCCATTAAGAGGC 59.224 38.462 0.00 0.00 0.00 4.70
2595 6868 5.768164 ACATATTAAACCCCATTAAGAGGCG 59.232 40.000 0.00 0.00 0.00 5.52
2596 6869 2.047002 TAAACCCCATTAAGAGGCGC 57.953 50.000 0.00 0.00 0.00 6.53
2597 6870 0.331616 AAACCCCATTAAGAGGCGCT 59.668 50.000 7.64 0.00 0.00 5.92
2598 6871 1.209621 AACCCCATTAAGAGGCGCTA 58.790 50.000 7.64 0.00 0.00 4.26
2599 6872 0.759346 ACCCCATTAAGAGGCGCTAG 59.241 55.000 7.64 0.00 0.00 3.42
2600 6873 1.048601 CCCCATTAAGAGGCGCTAGA 58.951 55.000 7.64 0.00 0.00 2.43
2601 6874 1.416401 CCCCATTAAGAGGCGCTAGAA 59.584 52.381 7.64 0.00 0.00 2.10
2602 6875 2.039084 CCCCATTAAGAGGCGCTAGAAT 59.961 50.000 7.64 0.00 0.00 2.40
2603 6876 3.070018 CCCATTAAGAGGCGCTAGAATG 58.930 50.000 7.64 14.77 33.21 2.67
2604 6877 3.070018 CCATTAAGAGGCGCTAGAATGG 58.930 50.000 21.86 21.86 40.76 3.16
2605 6878 3.495100 CCATTAAGAGGCGCTAGAATGGT 60.495 47.826 24.57 0.37 41.23 3.55
2606 6879 2.890808 TAAGAGGCGCTAGAATGGTG 57.109 50.000 7.64 0.00 0.00 4.17
2611 6884 4.635769 CGCTAGAATGGTGCCCAA 57.364 55.556 0.00 0.00 36.95 4.12
2612 6885 2.098293 CGCTAGAATGGTGCCCAAC 58.902 57.895 0.00 0.00 36.95 3.77
2621 6894 3.431725 GTGCCCAACCAGCTACGC 61.432 66.667 0.00 0.00 0.00 4.42
2622 6895 4.715523 TGCCCAACCAGCTACGCC 62.716 66.667 0.00 0.00 0.00 5.68
2623 6896 4.715523 GCCCAACCAGCTACGCCA 62.716 66.667 0.00 0.00 0.00 5.69
2624 6897 2.272146 CCCAACCAGCTACGCCAT 59.728 61.111 0.00 0.00 0.00 4.40
2625 6898 2.114670 CCCAACCAGCTACGCCATG 61.115 63.158 0.00 0.00 0.00 3.66
2626 6899 1.377202 CCAACCAGCTACGCCATGT 60.377 57.895 0.00 0.00 0.00 3.21
2627 6900 1.647545 CCAACCAGCTACGCCATGTG 61.648 60.000 0.00 0.00 0.00 3.21
2628 6901 1.377202 AACCAGCTACGCCATGTGG 60.377 57.895 0.00 0.00 38.53 4.17
2640 6913 2.569657 ATGTGGCGCATGCTGTTG 59.430 55.556 17.13 0.39 42.25 3.33
2641 6914 2.997075 ATGTGGCGCATGCTGTTGG 61.997 57.895 17.13 0.00 42.25 3.77
2642 6915 3.673484 GTGGCGCATGCTGTTGGT 61.673 61.111 17.13 0.00 42.25 3.67
2643 6916 3.364441 TGGCGCATGCTGTTGGTC 61.364 61.111 17.13 1.15 42.25 4.02
2644 6917 3.364441 GGCGCATGCTGTTGGTCA 61.364 61.111 17.13 0.00 42.25 4.02
2645 6918 2.126734 GCGCATGCTGTTGGTCAC 60.127 61.111 17.13 0.00 38.39 3.67
2646 6919 2.174107 CGCATGCTGTTGGTCACG 59.826 61.111 17.13 0.00 0.00 4.35
2647 6920 2.562912 GCATGCTGTTGGTCACGG 59.437 61.111 11.37 0.00 34.40 4.94
2648 6921 2.260869 GCATGCTGTTGGTCACGGT 61.261 57.895 11.37 0.00 33.70 4.83
2649 6922 1.575922 CATGCTGTTGGTCACGGTG 59.424 57.895 0.56 0.56 33.70 4.94
2650 6923 0.884259 CATGCTGTTGGTCACGGTGA 60.884 55.000 6.76 6.76 33.70 4.02
2651 6924 0.603707 ATGCTGTTGGTCACGGTGAG 60.604 55.000 11.83 0.00 33.70 3.51
2652 6925 1.069090 GCTGTTGGTCACGGTGAGA 59.931 57.895 11.83 0.00 33.70 3.27
2653 6926 0.531974 GCTGTTGGTCACGGTGAGAA 60.532 55.000 11.83 4.78 33.70 2.87
2654 6927 1.948104 CTGTTGGTCACGGTGAGAAA 58.052 50.000 11.83 6.21 0.00 2.52
2655 6928 1.867233 CTGTTGGTCACGGTGAGAAAG 59.133 52.381 11.83 1.77 0.00 2.62
2656 6929 1.208535 TGTTGGTCACGGTGAGAAAGT 59.791 47.619 11.83 0.00 0.00 2.66
2657 6930 2.285977 GTTGGTCACGGTGAGAAAGTT 58.714 47.619 11.83 0.00 0.00 2.66
2658 6931 2.681344 GTTGGTCACGGTGAGAAAGTTT 59.319 45.455 11.83 0.00 0.00 2.66
2659 6932 2.993937 TGGTCACGGTGAGAAAGTTTT 58.006 42.857 11.83 0.00 0.00 2.43
2660 6933 3.349022 TGGTCACGGTGAGAAAGTTTTT 58.651 40.909 11.83 0.00 0.00 1.94
2733 7006 9.883142 TTTTTCCTTTTAAGATTGTTGTGATGT 57.117 25.926 0.00 0.00 0.00 3.06
2734 7007 9.528018 TTTTCCTTTTAAGATTGTTGTGATGTC 57.472 29.630 0.00 0.00 0.00 3.06
2735 7008 7.214467 TCCTTTTAAGATTGTTGTGATGTCC 57.786 36.000 0.00 0.00 0.00 4.02
2736 7009 6.775142 TCCTTTTAAGATTGTTGTGATGTCCA 59.225 34.615 0.00 0.00 0.00 4.02
2737 7010 6.863126 CCTTTTAAGATTGTTGTGATGTCCAC 59.137 38.462 0.00 0.00 45.88 4.02
2746 7019 0.735978 GTGATGTCCACGTGATGCGA 60.736 55.000 19.30 2.05 44.77 5.10
2747 7020 0.458370 TGATGTCCACGTGATGCGAG 60.458 55.000 19.30 0.00 44.77 5.03
2748 7021 0.179137 GATGTCCACGTGATGCGAGA 60.179 55.000 19.30 4.33 44.77 4.04
2749 7022 0.246360 ATGTCCACGTGATGCGAGAA 59.754 50.000 19.30 0.00 44.77 2.87
2750 7023 0.246360 TGTCCACGTGATGCGAGAAT 59.754 50.000 19.30 0.00 44.77 2.40
2751 7024 0.647410 GTCCACGTGATGCGAGAATG 59.353 55.000 19.30 0.00 44.77 2.67
2752 7025 0.246360 TCCACGTGATGCGAGAATGT 59.754 50.000 19.30 0.00 44.77 2.71
2753 7026 1.078709 CCACGTGATGCGAGAATGTT 58.921 50.000 19.30 0.00 44.77 2.71
2754 7027 2.094442 TCCACGTGATGCGAGAATGTTA 60.094 45.455 19.30 0.00 44.77 2.41
2755 7028 2.866156 CCACGTGATGCGAGAATGTTAT 59.134 45.455 19.30 0.00 44.77 1.89
2756 7029 4.048504 CCACGTGATGCGAGAATGTTATA 58.951 43.478 19.30 0.00 44.77 0.98
2757 7030 4.506288 CCACGTGATGCGAGAATGTTATAA 59.494 41.667 19.30 0.00 44.77 0.98
2758 7031 5.006261 CCACGTGATGCGAGAATGTTATAAA 59.994 40.000 19.30 0.00 44.77 1.40
2759 7032 6.456315 CCACGTGATGCGAGAATGTTATAAAA 60.456 38.462 19.30 0.00 44.77 1.52
2760 7033 6.958752 CACGTGATGCGAGAATGTTATAAAAA 59.041 34.615 10.90 0.00 44.77 1.94
2781 7054 4.913335 AATTGACATGATGATGAGGTGC 57.087 40.909 0.00 0.00 33.36 5.01
2782 7055 1.944032 TGACATGATGATGAGGTGCG 58.056 50.000 0.00 0.00 33.36 5.34
2783 7056 0.585357 GACATGATGATGAGGTGCGC 59.415 55.000 0.00 0.00 33.36 6.09
2784 7057 0.107557 ACATGATGATGAGGTGCGCA 60.108 50.000 5.66 5.66 33.36 6.09
2785 7058 1.235724 CATGATGATGAGGTGCGCAT 58.764 50.000 15.91 0.00 0.00 4.73
2786 7059 2.224354 ACATGATGATGAGGTGCGCATA 60.224 45.455 15.91 0.44 33.36 3.14
2787 7060 2.159327 TGATGATGAGGTGCGCATAG 57.841 50.000 15.91 0.00 0.00 2.23
2788 7061 1.413812 TGATGATGAGGTGCGCATAGT 59.586 47.619 15.91 0.00 0.00 2.12
2789 7062 2.158914 TGATGATGAGGTGCGCATAGTT 60.159 45.455 15.91 0.00 0.00 2.24
2790 7063 2.401583 TGATGAGGTGCGCATAGTTT 57.598 45.000 15.91 0.00 0.00 2.66
2791 7064 2.009051 TGATGAGGTGCGCATAGTTTG 58.991 47.619 15.91 0.00 0.00 2.93
2803 7076 3.207474 CATAGTTTGCTGTCAAGTGGC 57.793 47.619 0.00 0.00 33.12 5.01
2804 7077 1.604604 TAGTTTGCTGTCAAGTGGCC 58.395 50.000 0.00 0.00 33.12 5.36
2805 7078 1.109323 AGTTTGCTGTCAAGTGGCCC 61.109 55.000 0.00 0.00 33.12 5.80
2806 7079 2.192861 TTTGCTGTCAAGTGGCCCG 61.193 57.895 0.00 0.00 33.12 6.13
2809 7082 2.594303 CTGTCAAGTGGCCCGCAA 60.594 61.111 0.00 0.00 0.00 4.85
2810 7083 1.973281 CTGTCAAGTGGCCCGCAAT 60.973 57.895 0.00 0.00 0.00 3.56
2811 7084 2.203972 CTGTCAAGTGGCCCGCAATG 62.204 60.000 0.00 0.00 0.00 2.82
2812 7085 2.676121 TCAAGTGGCCCGCAATGG 60.676 61.111 0.00 0.00 37.55 3.16
2829 7102 4.796495 GCGGGCCCCAACCACTAG 62.796 72.222 18.66 0.00 0.00 2.57
2830 7103 3.327404 CGGGCCCCAACCACTAGT 61.327 66.667 18.66 0.00 0.00 2.57
2831 7104 1.991167 CGGGCCCCAACCACTAGTA 60.991 63.158 18.66 0.00 0.00 1.82
2832 7105 1.912971 GGGCCCCAACCACTAGTAG 59.087 63.158 12.23 0.00 0.00 2.57
2833 7106 0.912968 GGGCCCCAACCACTAGTAGT 60.913 60.000 12.23 0.00 0.00 2.73
2834 7107 0.252197 GGCCCCAACCACTAGTAGTG 59.748 60.000 21.39 21.39 45.53 2.74
2844 7117 2.864968 CACTAGTAGTGGACAAGCGTC 58.135 52.381 20.73 0.00 42.35 5.19
2845 7118 2.488545 CACTAGTAGTGGACAAGCGTCT 59.511 50.000 20.73 0.00 42.35 4.18
2846 7119 2.748532 ACTAGTAGTGGACAAGCGTCTC 59.251 50.000 0.85 0.00 42.21 3.36
2847 7120 0.889306 AGTAGTGGACAAGCGTCTCC 59.111 55.000 0.00 0.00 42.21 3.71
2848 7121 0.601558 GTAGTGGACAAGCGTCTCCA 59.398 55.000 0.00 0.00 42.21 3.86
2849 7122 1.204941 GTAGTGGACAAGCGTCTCCAT 59.795 52.381 0.00 0.00 42.21 3.41
2850 7123 0.687354 AGTGGACAAGCGTCTCCATT 59.313 50.000 0.00 0.00 42.21 3.16
2851 7124 1.899814 AGTGGACAAGCGTCTCCATTA 59.100 47.619 0.00 0.00 42.21 1.90
2852 7125 2.501723 AGTGGACAAGCGTCTCCATTAT 59.498 45.455 0.00 0.00 42.21 1.28
2853 7126 3.055094 AGTGGACAAGCGTCTCCATTATT 60.055 43.478 0.00 0.00 42.21 1.40
2854 7127 3.309954 GTGGACAAGCGTCTCCATTATTC 59.690 47.826 0.00 0.00 42.21 1.75
2855 7128 3.197766 TGGACAAGCGTCTCCATTATTCT 59.802 43.478 0.00 0.00 42.21 2.40
2856 7129 3.557595 GGACAAGCGTCTCCATTATTCTG 59.442 47.826 0.00 0.00 42.21 3.02
2857 7130 4.184629 GACAAGCGTCTCCATTATTCTGT 58.815 43.478 0.00 0.00 39.22 3.41
2858 7131 4.579869 ACAAGCGTCTCCATTATTCTGTT 58.420 39.130 0.00 0.00 0.00 3.16
2859 7132 5.730550 ACAAGCGTCTCCATTATTCTGTTA 58.269 37.500 0.00 0.00 0.00 2.41
2860 7133 5.581085 ACAAGCGTCTCCATTATTCTGTTAC 59.419 40.000 0.00 0.00 0.00 2.50
2861 7134 5.599999 AGCGTCTCCATTATTCTGTTACT 57.400 39.130 0.00 0.00 0.00 2.24
2862 7135 6.710597 AGCGTCTCCATTATTCTGTTACTA 57.289 37.500 0.00 0.00 0.00 1.82
2863 7136 7.108841 AGCGTCTCCATTATTCTGTTACTAA 57.891 36.000 0.00 0.00 0.00 2.24
2864 7137 7.553334 AGCGTCTCCATTATTCTGTTACTAAA 58.447 34.615 0.00 0.00 0.00 1.85
2865 7138 8.204836 AGCGTCTCCATTATTCTGTTACTAAAT 58.795 33.333 0.00 0.00 0.00 1.40
2866 7139 8.276325 GCGTCTCCATTATTCTGTTACTAAATG 58.724 37.037 0.00 0.00 0.00 2.32
2867 7140 9.314321 CGTCTCCATTATTCTGTTACTAAATGT 57.686 33.333 0.00 0.00 0.00 2.71
2883 7156 7.923414 ACTAAATGTAACCTTTGTCCATCTC 57.077 36.000 0.00 0.00 0.00 2.75
2884 7157 7.690256 ACTAAATGTAACCTTTGTCCATCTCT 58.310 34.615 0.00 0.00 0.00 3.10
2885 7158 8.822805 ACTAAATGTAACCTTTGTCCATCTCTA 58.177 33.333 0.00 0.00 0.00 2.43
2886 7159 9.319143 CTAAATGTAACCTTTGTCCATCTCTAG 57.681 37.037 0.00 0.00 0.00 2.43
2887 7160 6.875972 ATGTAACCTTTGTCCATCTCTAGT 57.124 37.500 0.00 0.00 0.00 2.57
2888 7161 6.282199 TGTAACCTTTGTCCATCTCTAGTC 57.718 41.667 0.00 0.00 0.00 2.59
2889 7162 6.017192 TGTAACCTTTGTCCATCTCTAGTCT 58.983 40.000 0.00 0.00 0.00 3.24
2890 7163 6.497259 TGTAACCTTTGTCCATCTCTAGTCTT 59.503 38.462 0.00 0.00 0.00 3.01
2891 7164 5.669164 ACCTTTGTCCATCTCTAGTCTTC 57.331 43.478 0.00 0.00 0.00 2.87
2892 7165 4.158764 ACCTTTGTCCATCTCTAGTCTTCG 59.841 45.833 0.00 0.00 0.00 3.79
2893 7166 4.399618 CCTTTGTCCATCTCTAGTCTTCGA 59.600 45.833 0.00 0.00 0.00 3.71
2894 7167 5.449862 CCTTTGTCCATCTCTAGTCTTCGAG 60.450 48.000 0.00 0.00 0.00 4.04
2895 7168 2.946329 TGTCCATCTCTAGTCTTCGAGC 59.054 50.000 0.00 0.00 0.00 5.03
2896 7169 3.211045 GTCCATCTCTAGTCTTCGAGCT 58.789 50.000 0.00 0.00 0.00 4.09
2897 7170 3.003275 GTCCATCTCTAGTCTTCGAGCTG 59.997 52.174 0.00 0.00 0.00 4.24
2898 7171 3.118223 TCCATCTCTAGTCTTCGAGCTGA 60.118 47.826 0.00 0.00 0.00 4.26
2899 7172 3.629855 CCATCTCTAGTCTTCGAGCTGAA 59.370 47.826 0.00 0.00 34.74 3.02
2900 7173 4.097135 CCATCTCTAGTCTTCGAGCTGAAA 59.903 45.833 0.00 0.00 35.79 2.69
2901 7174 5.221224 CCATCTCTAGTCTTCGAGCTGAAAT 60.221 44.000 0.00 0.00 35.79 2.17
2902 7175 6.016693 CCATCTCTAGTCTTCGAGCTGAAATA 60.017 42.308 0.00 0.00 35.79 1.40
2903 7176 7.421599 CATCTCTAGTCTTCGAGCTGAAATAA 58.578 38.462 0.00 0.00 35.79 1.40
2904 7177 7.575414 TCTCTAGTCTTCGAGCTGAAATAAT 57.425 36.000 0.00 0.00 35.79 1.28
2905 7178 7.421599 TCTCTAGTCTTCGAGCTGAAATAATG 58.578 38.462 0.00 0.00 35.79 1.90
2906 7179 7.283354 TCTCTAGTCTTCGAGCTGAAATAATGA 59.717 37.037 0.00 0.00 35.79 2.57
2907 7180 7.421599 TCTAGTCTTCGAGCTGAAATAATGAG 58.578 38.462 0.00 0.00 35.79 2.90
2908 7181 5.971763 AGTCTTCGAGCTGAAATAATGAGT 58.028 37.500 0.00 0.00 35.79 3.41
2909 7182 6.402222 AGTCTTCGAGCTGAAATAATGAGTT 58.598 36.000 0.00 0.00 35.79 3.01
2910 7183 7.548097 AGTCTTCGAGCTGAAATAATGAGTTA 58.452 34.615 0.00 0.00 35.79 2.24
2911 7184 8.035394 AGTCTTCGAGCTGAAATAATGAGTTAA 58.965 33.333 0.00 0.00 35.79 2.01
2912 7185 8.111224 GTCTTCGAGCTGAAATAATGAGTTAAC 58.889 37.037 0.00 0.00 35.79 2.01
2913 7186 7.817478 TCTTCGAGCTGAAATAATGAGTTAACA 59.183 33.333 8.61 0.00 35.79 2.41
2914 7187 8.492673 TTCGAGCTGAAATAATGAGTTAACAT 57.507 30.769 8.61 0.00 32.37 2.71
2915 7188 8.131455 TCGAGCTGAAATAATGAGTTAACATC 57.869 34.615 8.61 3.47 0.00 3.06
2916 7189 7.981789 TCGAGCTGAAATAATGAGTTAACATCT 59.018 33.333 8.61 0.00 0.00 2.90
2917 7190 8.272176 CGAGCTGAAATAATGAGTTAACATCTC 58.728 37.037 8.61 0.00 0.00 2.75
2918 7191 9.102757 GAGCTGAAATAATGAGTTAACATCTCA 57.897 33.333 8.61 3.39 44.37 3.27
2919 7192 8.887717 AGCTGAAATAATGAGTTAACATCTCAC 58.112 33.333 8.61 0.00 43.32 3.51
2920 7193 8.887717 GCTGAAATAATGAGTTAACATCTCACT 58.112 33.333 8.61 0.00 43.32 3.41
2926 7199 7.783090 AATGAGTTAACATCTCACTATGCTG 57.217 36.000 8.61 0.00 43.32 4.41
2927 7200 6.286240 TGAGTTAACATCTCACTATGCTGT 57.714 37.500 8.61 0.00 37.07 4.40
2928 7201 6.101997 TGAGTTAACATCTCACTATGCTGTG 58.898 40.000 8.61 0.00 37.07 3.66
2929 7202 5.423015 AGTTAACATCTCACTATGCTGTGG 58.577 41.667 8.61 0.00 38.40 4.17
2930 7203 2.996249 ACATCTCACTATGCTGTGGG 57.004 50.000 5.53 2.75 39.64 4.61
2931 7204 1.487976 ACATCTCACTATGCTGTGGGG 59.512 52.381 5.41 1.13 38.84 4.96
2932 7205 1.764723 CATCTCACTATGCTGTGGGGA 59.235 52.381 5.41 5.25 38.84 4.81
2933 7206 2.180946 TCTCACTATGCTGTGGGGAT 57.819 50.000 5.41 0.00 38.84 3.85
2934 7207 2.481441 TCTCACTATGCTGTGGGGATT 58.519 47.619 5.41 0.00 38.84 3.01
2935 7208 2.171237 TCTCACTATGCTGTGGGGATTG 59.829 50.000 5.41 0.00 38.84 2.67
2936 7209 1.915489 TCACTATGCTGTGGGGATTGT 59.085 47.619 5.53 0.00 38.40 2.71
2937 7210 3.111484 TCACTATGCTGTGGGGATTGTA 58.889 45.455 5.53 0.00 38.40 2.41
2938 7211 3.118408 TCACTATGCTGTGGGGATTGTAC 60.118 47.826 5.53 0.00 38.40 2.90
2939 7212 2.843730 ACTATGCTGTGGGGATTGTACA 59.156 45.455 0.00 0.00 31.32 2.90
2940 7213 2.897271 ATGCTGTGGGGATTGTACAA 57.103 45.000 11.41 11.41 0.00 2.41
2941 7214 2.198827 TGCTGTGGGGATTGTACAAG 57.801 50.000 14.65 0.00 0.00 3.16
2942 7215 1.271871 TGCTGTGGGGATTGTACAAGG 60.272 52.381 14.65 0.00 0.00 3.61
2943 7216 1.955208 GCTGTGGGGATTGTACAAGGG 60.955 57.143 14.65 0.00 0.00 3.95
2944 7217 0.039035 TGTGGGGATTGTACAAGGGC 59.961 55.000 14.65 5.96 0.00 5.19
2945 7218 0.039035 GTGGGGATTGTACAAGGGCA 59.961 55.000 14.65 0.00 0.00 5.36
2946 7219 1.006813 TGGGGATTGTACAAGGGCAT 58.993 50.000 14.65 0.00 0.00 4.40
2947 7220 1.064017 TGGGGATTGTACAAGGGCATC 60.064 52.381 14.65 6.05 0.00 3.91
2948 7221 1.215423 GGGGATTGTACAAGGGCATCT 59.785 52.381 14.65 0.00 0.00 2.90
2949 7222 2.576615 GGGATTGTACAAGGGCATCTC 58.423 52.381 14.65 2.33 0.00 2.75
2950 7223 2.173569 GGGATTGTACAAGGGCATCTCT 59.826 50.000 14.65 0.00 0.00 3.10
2951 7224 3.391296 GGGATTGTACAAGGGCATCTCTA 59.609 47.826 14.65 0.00 0.00 2.43
2952 7225 4.503991 GGGATTGTACAAGGGCATCTCTAG 60.504 50.000 14.65 0.00 0.00 2.43
2953 7226 3.543680 TTGTACAAGGGCATCTCTAGC 57.456 47.619 3.59 0.00 0.00 3.42
2960 7233 1.594310 GGCATCTCTAGCCGATCCC 59.406 63.158 0.00 0.00 43.15 3.85
2961 7234 1.594310 GCATCTCTAGCCGATCCCC 59.406 63.158 0.00 0.00 0.00 4.81
2962 7235 0.902516 GCATCTCTAGCCGATCCCCT 60.903 60.000 0.00 0.00 0.00 4.79
2963 7236 1.617263 GCATCTCTAGCCGATCCCCTA 60.617 57.143 0.00 0.00 0.00 3.53
2964 7237 2.808919 CATCTCTAGCCGATCCCCTAA 58.191 52.381 0.00 0.00 0.00 2.69
2965 7238 3.165875 CATCTCTAGCCGATCCCCTAAA 58.834 50.000 0.00 0.00 0.00 1.85
2966 7239 3.323774 TCTCTAGCCGATCCCCTAAAA 57.676 47.619 0.00 0.00 0.00 1.52
2967 7240 3.858135 TCTCTAGCCGATCCCCTAAAAT 58.142 45.455 0.00 0.00 0.00 1.82
2968 7241 4.232091 TCTCTAGCCGATCCCCTAAAATT 58.768 43.478 0.00 0.00 0.00 1.82
2969 7242 5.399991 TCTCTAGCCGATCCCCTAAAATTA 58.600 41.667 0.00 0.00 0.00 1.40
2970 7243 5.480772 TCTCTAGCCGATCCCCTAAAATTAG 59.519 44.000 0.00 0.00 0.00 1.73
2971 7244 5.152934 TCTAGCCGATCCCCTAAAATTAGT 58.847 41.667 0.00 0.00 0.00 2.24
2972 7245 4.086706 AGCCGATCCCCTAAAATTAGTG 57.913 45.455 0.00 0.00 0.00 2.74
2973 7246 3.714798 AGCCGATCCCCTAAAATTAGTGA 59.285 43.478 0.00 0.00 0.00 3.41
2974 7247 4.165372 AGCCGATCCCCTAAAATTAGTGAA 59.835 41.667 0.00 0.00 0.00 3.18
2975 7248 4.515567 GCCGATCCCCTAAAATTAGTGAAG 59.484 45.833 0.00 0.00 0.00 3.02
2976 7249 5.681639 CCGATCCCCTAAAATTAGTGAAGT 58.318 41.667 0.00 0.00 0.00 3.01
2977 7250 6.687139 GCCGATCCCCTAAAATTAGTGAAGTA 60.687 42.308 0.00 0.00 0.00 2.24
2978 7251 7.277396 CCGATCCCCTAAAATTAGTGAAGTAA 58.723 38.462 0.00 0.00 0.00 2.24
2979 7252 7.771826 CCGATCCCCTAAAATTAGTGAAGTAAA 59.228 37.037 0.00 0.00 0.00 2.01
2980 7253 9.169592 CGATCCCCTAAAATTAGTGAAGTAAAA 57.830 33.333 0.00 0.00 0.00 1.52
3006 7279 6.951062 AATCTCAATTCTTTTAGCCTAGCC 57.049 37.500 0.00 0.00 0.00 3.93
3007 7280 5.435686 TCTCAATTCTTTTAGCCTAGCCA 57.564 39.130 0.00 0.00 0.00 4.75
3008 7281 5.186198 TCTCAATTCTTTTAGCCTAGCCAC 58.814 41.667 0.00 0.00 0.00 5.01
3009 7282 4.917385 TCAATTCTTTTAGCCTAGCCACA 58.083 39.130 0.00 0.00 0.00 4.17
3010 7283 5.509498 TCAATTCTTTTAGCCTAGCCACAT 58.491 37.500 0.00 0.00 0.00 3.21
3011 7284 5.357878 TCAATTCTTTTAGCCTAGCCACATG 59.642 40.000 0.00 0.00 0.00 3.21
3012 7285 4.568072 TTCTTTTAGCCTAGCCACATGA 57.432 40.909 0.00 0.00 0.00 3.07
3013 7286 4.568072 TCTTTTAGCCTAGCCACATGAA 57.432 40.909 0.00 0.00 0.00 2.57
3014 7287 4.261801 TCTTTTAGCCTAGCCACATGAAC 58.738 43.478 0.00 0.00 0.00 3.18
3015 7288 3.712016 TTTAGCCTAGCCACATGAACA 57.288 42.857 0.00 0.00 0.00 3.18
3016 7289 3.931907 TTAGCCTAGCCACATGAACAT 57.068 42.857 0.00 0.00 0.00 2.71
3017 7290 2.338577 AGCCTAGCCACATGAACATC 57.661 50.000 0.00 0.00 0.00 3.06
3018 7291 1.561076 AGCCTAGCCACATGAACATCA 59.439 47.619 0.00 0.00 0.00 3.07
3019 7292 2.025981 AGCCTAGCCACATGAACATCAA 60.026 45.455 0.00 0.00 0.00 2.57
3020 7293 2.754552 GCCTAGCCACATGAACATCAAA 59.245 45.455 0.00 0.00 0.00 2.69
3021 7294 3.428045 GCCTAGCCACATGAACATCAAAC 60.428 47.826 0.00 0.00 0.00 2.93
3022 7295 3.758023 CCTAGCCACATGAACATCAAACA 59.242 43.478 0.00 0.00 0.00 2.83
3023 7296 4.218200 CCTAGCCACATGAACATCAAACAA 59.782 41.667 0.00 0.00 0.00 2.83
3024 7297 3.981211 AGCCACATGAACATCAAACAAC 58.019 40.909 0.00 0.00 0.00 3.32
3025 7298 3.638160 AGCCACATGAACATCAAACAACT 59.362 39.130 0.00 0.00 0.00 3.16
3026 7299 3.737266 GCCACATGAACATCAAACAACTG 59.263 43.478 0.00 0.00 0.00 3.16
3027 7300 3.737266 CCACATGAACATCAAACAACTGC 59.263 43.478 0.00 0.00 0.00 4.40
3028 7301 4.361420 CACATGAACATCAAACAACTGCA 58.639 39.130 0.00 0.00 0.00 4.41
3029 7302 4.986034 CACATGAACATCAAACAACTGCAT 59.014 37.500 0.00 0.00 0.00 3.96
3030 7303 6.151004 CACATGAACATCAAACAACTGCATA 58.849 36.000 0.00 0.00 0.00 3.14
3031 7304 6.641723 CACATGAACATCAAACAACTGCATAA 59.358 34.615 0.00 0.00 0.00 1.90
3032 7305 7.329962 CACATGAACATCAAACAACTGCATAAT 59.670 33.333 0.00 0.00 0.00 1.28
3033 7306 8.522003 ACATGAACATCAAACAACTGCATAATA 58.478 29.630 0.00 0.00 0.00 0.98
3034 7307 9.524106 CATGAACATCAAACAACTGCATAATAT 57.476 29.630 0.00 0.00 0.00 1.28
3071 7344 9.950858 ATTCAAATATTTCAAAATAAACACGCG 57.049 25.926 3.53 3.53 34.79 6.01
3072 7345 8.508800 TCAAATATTTCAAAATAAACACGCGT 57.491 26.923 5.58 5.58 34.79 6.01
3073 7346 9.608617 TCAAATATTTCAAAATAAACACGCGTA 57.391 25.926 13.44 0.00 34.79 4.42
3077 7350 7.861176 ATTTCAAAATAAACACGCGTAATGT 57.139 28.000 13.44 2.36 0.00 2.71
3078 7351 8.951954 ATTTCAAAATAAACACGCGTAATGTA 57.048 26.923 13.44 2.78 0.00 2.29
3079 7352 8.951954 TTTCAAAATAAACACGCGTAATGTAT 57.048 26.923 13.44 5.42 0.00 2.29
3084 7357 8.825064 AAATAAACACGCGTAATGTATAAACC 57.175 30.769 13.44 0.00 0.00 3.27
3085 7358 5.859521 AAACACGCGTAATGTATAAACCA 57.140 34.783 13.44 0.00 0.00 3.67
3086 7359 6.425577 AAACACGCGTAATGTATAAACCAT 57.574 33.333 13.44 0.00 0.00 3.55
3087 7360 6.425577 AACACGCGTAATGTATAAACCATT 57.574 33.333 13.44 0.00 36.53 3.16
3088 7361 7.536895 AACACGCGTAATGTATAAACCATTA 57.463 32.000 13.44 0.00 34.51 1.90
3089 7362 7.536895 ACACGCGTAATGTATAAACCATTAA 57.463 32.000 13.44 0.00 36.74 1.40
3090 7363 7.401080 ACACGCGTAATGTATAAACCATTAAC 58.599 34.615 13.44 0.00 36.74 2.01
3091 7364 7.064371 ACACGCGTAATGTATAAACCATTAACA 59.936 33.333 13.44 0.00 36.74 2.41
3092 7365 7.903946 CACGCGTAATGTATAAACCATTAACAA 59.096 33.333 13.44 0.00 36.74 2.83
3093 7366 8.449397 ACGCGTAATGTATAAACCATTAACAAA 58.551 29.630 11.67 0.00 36.74 2.83
3094 7367 8.726836 CGCGTAATGTATAAACCATTAACAAAC 58.273 33.333 0.00 0.00 36.74 2.93
3095 7368 9.557338 GCGTAATGTATAAACCATTAACAAACA 57.443 29.630 0.00 0.00 36.74 2.83
3118 7391 9.847224 AACATTTAGTTTAACGGATGGAGATAT 57.153 29.630 10.99 0.00 37.03 1.63
3119 7392 9.847224 ACATTTAGTTTAACGGATGGAGATATT 57.153 29.630 10.99 0.00 0.00 1.28
3122 7395 9.893634 TTTAGTTTAACGGATGGAGATATTCAA 57.106 29.630 0.00 0.00 0.00 2.69
3123 7396 9.893634 TTAGTTTAACGGATGGAGATATTCAAA 57.106 29.630 0.00 0.00 0.00 2.69
3124 7397 8.980481 AGTTTAACGGATGGAGATATTCAAAT 57.020 30.769 0.00 0.00 0.00 2.32
3125 7398 9.408648 AGTTTAACGGATGGAGATATTCAAATT 57.591 29.630 0.00 0.00 0.00 1.82
3131 7404 9.184523 ACGGATGGAGATATTCAAATTAAAACA 57.815 29.630 0.00 0.00 0.00 2.83
3132 7405 9.450807 CGGATGGAGATATTCAAATTAAAACAC 57.549 33.333 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 2.042464 TGCTCTACCATGGTCAGGATC 58.958 52.381 23.76 13.87 0.00 3.36
57 58 1.616994 GCCCTTTTGCTCTACCATGGT 60.617 52.381 23.55 23.55 0.00 3.55
64 65 1.144913 AGGTTGTGCCCTTTTGCTCTA 59.855 47.619 0.00 0.00 38.26 2.43
65 66 0.106015 AGGTTGTGCCCTTTTGCTCT 60.106 50.000 0.00 0.00 38.26 4.09
95 96 4.581409 TGCTCATGGAACCATATGTGAATG 59.419 41.667 6.00 0.00 34.91 2.67
100 101 3.650281 TGTGCTCATGGAACCATATGT 57.350 42.857 6.00 0.00 34.91 2.29
101 102 3.243301 GCTTGTGCTCATGGAACCATATG 60.243 47.826 6.00 0.00 34.01 1.78
103 104 2.290832 TGCTTGTGCTCATGGAACCATA 60.291 45.455 6.00 0.00 40.48 2.74
105 106 0.178995 TGCTTGTGCTCATGGAACCA 60.179 50.000 0.00 0.00 40.48 3.67
113 114 1.207339 CGCGAAATGCTTGTGCTCA 59.793 52.632 0.00 0.00 43.27 4.26
130 131 1.141881 AATGCGTCAGAGTAGGGCG 59.858 57.895 0.00 0.00 0.00 6.13
154 155 3.111853 GTGACATCCACTCACAGTTGA 57.888 47.619 0.00 0.00 42.44 3.18
169 170 3.893326 ACCATCGATGATTGAGTGACA 57.107 42.857 26.86 0.00 0.00 3.58
170 171 4.504461 GTGTACCATCGATGATTGAGTGAC 59.496 45.833 26.86 11.95 0.00 3.67
173 174 3.450817 TGGTGTACCATCGATGATTGAGT 59.549 43.478 26.86 16.83 42.01 3.41
313 984 8.928844 GGACGGATTGTACGATAATTTTAATG 57.071 34.615 0.00 0.00 34.93 1.90
328 999 3.160777 GTCTGATAACGGACGGATTGT 57.839 47.619 0.00 0.00 41.61 2.71
405 1076 2.123208 TGTCCACGTCCACCTCCA 60.123 61.111 0.00 0.00 0.00 3.86
417 1088 1.122632 TTAGGCAACCTCCGTGTCCA 61.123 55.000 0.00 0.00 34.61 4.02
443 1114 1.078848 ATCAAGGAGGTGCTGTCGC 60.079 57.895 0.00 0.00 0.00 5.19
519 1191 3.428045 CCGGAATCCAAAAGAACATCAGC 60.428 47.826 0.00 0.00 0.00 4.26
583 1255 4.776322 CGCCAGATCGCAACCCCA 62.776 66.667 0.00 0.00 0.00 4.96
627 1299 9.599322 CAAATTTATATTCCAATCTACGCTGAC 57.401 33.333 0.00 0.00 0.00 3.51
645 1317 6.756074 CGCATATTGTCCACCAACAAATTTAT 59.244 34.615 0.00 0.00 42.10 1.40
658 1330 0.599991 CGCTAGCCGCATATTGTCCA 60.600 55.000 9.66 0.00 39.08 4.02
706 1378 1.546029 CGGACAGAGGATCAGTTCACA 59.454 52.381 0.00 0.00 33.82 3.58
708 1380 1.546029 CACGGACAGAGGATCAGTTCA 59.454 52.381 0.00 0.00 33.82 3.18
710 1382 1.924731 TCACGGACAGAGGATCAGTT 58.075 50.000 0.00 0.00 33.82 3.16
727 1421 4.690719 ACCGCCCGCATTCGTTCA 62.691 61.111 0.00 0.00 0.00 3.18
729 1423 2.077821 AAAAACCGCCCGCATTCGTT 62.078 50.000 0.00 0.00 0.00 3.85
786 1481 3.980775 GTGGGAACAAAAACGACATCATG 59.019 43.478 0.00 0.00 46.06 3.07
859 1557 1.286260 GTGCGGCTCTACTATCCCG 59.714 63.158 0.00 0.00 43.38 5.14
896 1594 1.531149 CGCGGCGGAGATATTTTCAAT 59.469 47.619 15.84 0.00 0.00 2.57
946 1650 2.033424 GTGAAGACAAGCAAACCACCTC 59.967 50.000 0.00 0.00 0.00 3.85
949 1653 1.400494 ACGTGAAGACAAGCAAACCAC 59.600 47.619 0.00 0.00 0.00 4.16
1030 2762 3.553828 TGACTTGGTTTCCTTTCTCGT 57.446 42.857 0.00 0.00 0.00 4.18
1093 2825 1.032114 GCGGAGAAAGGTGGGGAATG 61.032 60.000 0.00 0.00 0.00 2.67
1104 2836 0.331278 ATGATTGGTGGGCGGAGAAA 59.669 50.000 0.00 0.00 0.00 2.52
1132 2883 1.675641 AATCCGGAGTTGTGCTGCC 60.676 57.895 11.34 0.00 31.20 4.85
1133 2884 1.503542 CAATCCGGAGTTGTGCTGC 59.496 57.895 11.34 0.00 0.00 5.25
1163 2914 2.156051 GAGTCGCGTCCTGGTCCTTT 62.156 60.000 5.77 0.00 0.00 3.11
1164 2915 2.600769 AGTCGCGTCCTGGTCCTT 60.601 61.111 5.77 0.00 0.00 3.36
1210 2965 2.436596 AATGAACAGGCCAGCCAGCT 62.437 55.000 12.03 0.00 38.92 4.24
1211 2966 1.941999 GAATGAACAGGCCAGCCAGC 61.942 60.000 12.03 0.00 38.92 4.85
1213 2968 1.675310 CGAATGAACAGGCCAGCCA 60.675 57.895 12.03 0.00 38.92 4.75
1214 2969 1.648467 GACGAATGAACAGGCCAGCC 61.648 60.000 5.01 0.00 0.00 4.85
1215 2970 0.674895 AGACGAATGAACAGGCCAGC 60.675 55.000 5.01 0.00 0.00 4.85
1216 2971 1.338105 TGAGACGAATGAACAGGCCAG 60.338 52.381 5.01 0.00 0.00 4.85
1217 2972 0.684535 TGAGACGAATGAACAGGCCA 59.315 50.000 5.01 0.00 0.00 5.36
1218 2973 1.363744 CTGAGACGAATGAACAGGCC 58.636 55.000 0.00 0.00 0.00 5.19
1219 2974 0.723981 GCTGAGACGAATGAACAGGC 59.276 55.000 0.00 0.00 0.00 4.85
1220 2975 2.376808 AGCTGAGACGAATGAACAGG 57.623 50.000 0.00 0.00 0.00 4.00
1221 2976 3.062763 ACAAGCTGAGACGAATGAACAG 58.937 45.455 0.00 0.00 0.00 3.16
1222 2977 3.111853 ACAAGCTGAGACGAATGAACA 57.888 42.857 0.00 0.00 0.00 3.18
1223 2978 3.743396 AGAACAAGCTGAGACGAATGAAC 59.257 43.478 0.00 0.00 0.00 3.18
1224 2979 3.995199 AGAACAAGCTGAGACGAATGAA 58.005 40.909 0.00 0.00 0.00 2.57
1225 2980 3.667497 AGAACAAGCTGAGACGAATGA 57.333 42.857 0.00 0.00 0.00 2.57
1226 2981 3.181536 CGAAGAACAAGCTGAGACGAATG 60.182 47.826 0.00 0.00 0.00 2.67
1227 2982 2.989840 CGAAGAACAAGCTGAGACGAAT 59.010 45.455 0.00 0.00 0.00 3.34
1228 2983 2.223735 ACGAAGAACAAGCTGAGACGAA 60.224 45.455 0.00 0.00 0.00 3.85
1229 2984 1.337071 ACGAAGAACAAGCTGAGACGA 59.663 47.619 0.00 0.00 0.00 4.20
1230 2985 1.772182 ACGAAGAACAAGCTGAGACG 58.228 50.000 0.00 0.00 0.00 4.18
1231 2986 4.519147 GAAAACGAAGAACAAGCTGAGAC 58.481 43.478 0.00 0.00 0.00 3.36
1235 2990 3.304057 GGAGGAAAACGAAGAACAAGCTG 60.304 47.826 0.00 0.00 0.00 4.24
1316 3072 1.024271 AATCGACGGCATTGGGAATG 58.976 50.000 0.00 0.00 41.85 2.67
1317 3073 1.024271 CAATCGACGGCATTGGGAAT 58.976 50.000 5.75 0.00 0.00 3.01
1332 3088 5.437289 TCATTCGGTAATGGAATGCAATC 57.563 39.130 9.11 0.00 46.50 2.67
1342 3098 9.687210 ATTCATTCATTCATTCATTCGGTAATG 57.313 29.630 0.00 0.00 43.32 1.90
1364 3120 8.883731 GCTCTTGCTACTACTTATTTTCATTCA 58.116 33.333 0.00 0.00 36.03 2.57
1367 3123 8.970859 ATGCTCTTGCTACTACTTATTTTCAT 57.029 30.769 0.00 0.00 40.48 2.57
1368 3124 8.260818 AGATGCTCTTGCTACTACTTATTTTCA 58.739 33.333 0.00 0.00 40.48 2.69
1369 3125 8.655651 AGATGCTCTTGCTACTACTTATTTTC 57.344 34.615 0.00 0.00 40.48 2.29
1374 3130 9.350951 TGTATAAGATGCTCTTGCTACTACTTA 57.649 33.333 8.21 0.00 37.29 2.24
1375 3131 8.239038 TGTATAAGATGCTCTTGCTACTACTT 57.761 34.615 8.21 0.00 37.29 2.24
1376 3132 7.825331 TGTATAAGATGCTCTTGCTACTACT 57.175 36.000 8.21 0.00 37.29 2.57
1377 3133 7.062839 GCATGTATAAGATGCTCTTGCTACTAC 59.937 40.741 9.71 4.42 42.52 2.73
1378 3134 7.093354 GCATGTATAAGATGCTCTTGCTACTA 58.907 38.462 9.71 3.80 42.52 1.82
1395 3239 3.779271 TGAACACGTACGGCATGTATA 57.221 42.857 21.06 5.06 35.02 1.47
1407 3251 4.819630 ACAAACCTGATAACATGAACACGT 59.180 37.500 0.00 0.00 0.00 4.49
1408 3252 5.356882 ACAAACCTGATAACATGAACACG 57.643 39.130 0.00 0.00 0.00 4.49
1409 3253 6.970484 AGAACAAACCTGATAACATGAACAC 58.030 36.000 0.00 0.00 0.00 3.32
1410 3254 7.424803 CAAGAACAAACCTGATAACATGAACA 58.575 34.615 0.00 0.00 0.00 3.18
1510 3395 1.275291 GGGTCTTTCAGGATGTCGTCA 59.725 52.381 0.00 0.00 37.40 4.35
1529 3414 3.076258 TACATGCGAGGTGCTCCGG 62.076 63.158 0.00 0.00 46.63 5.14
1537 3428 0.460284 GGGTGTGAGTACATGCGAGG 60.460 60.000 0.00 0.00 39.39 4.63
1658 3549 3.203412 CGACTCGGAGGTCTCGGG 61.203 72.222 10.23 0.00 34.38 5.14
1711 3605 2.928396 ACAGCTGCCCGGTTACCT 60.928 61.111 15.27 0.00 0.00 3.08
1765 3659 0.401738 CCACCTCTTCCTCCAGCAAA 59.598 55.000 0.00 0.00 0.00 3.68
1925 3819 0.465460 TTGTTCTTCACTGGCCGCTT 60.465 50.000 0.00 0.00 0.00 4.68
1933 3827 3.571401 CAGCCAAATCCTTGTTCTTCACT 59.429 43.478 0.00 0.00 0.00 3.41
1950 4863 0.110486 GGAACTTCCTTGGTCAGCCA 59.890 55.000 0.00 0.00 44.38 4.75
1983 4899 0.817229 GCATCTGAGCCTAACCTGCC 60.817 60.000 0.00 0.00 0.00 4.85
2013 4929 1.202510 GCATCTCTGGACTGCAGTAGG 60.203 57.143 21.73 12.74 35.96 3.18
2040 4956 4.141233 ACATCATCGTCATCCATTGTCA 57.859 40.909 0.00 0.00 0.00 3.58
2075 6105 2.551912 CGGCACCTTGACCCAACAC 61.552 63.158 0.00 0.00 0.00 3.32
2107 6137 0.468029 AACCTTGGAGCCACTGGTTG 60.468 55.000 19.17 0.00 39.68 3.77
2121 6151 5.324409 TCTTTACATCATCTGGCAAACCTT 58.676 37.500 0.00 0.00 36.63 3.50
2193 6228 4.505922 CGCTTTGCCATTTGTACAAGAAAA 59.494 37.500 8.56 4.10 0.00 2.29
2245 6307 9.352784 CCGAAATTGATGTTGCTATAAGAAAAA 57.647 29.630 0.00 0.00 0.00 1.94
2269 6331 2.723124 AACAAGCAGTTTATTGCCCG 57.277 45.000 0.00 0.00 45.18 6.13
2285 6347 6.296026 ACATACAGAAAGGCAGAAGTAAACA 58.704 36.000 0.00 0.00 0.00 2.83
2289 6351 6.109156 TGAACATACAGAAAGGCAGAAGTA 57.891 37.500 0.00 0.00 0.00 2.24
2294 6356 5.239306 TGAGTTTGAACATACAGAAAGGCAG 59.761 40.000 0.00 0.00 0.00 4.85
2303 6365 6.348458 GCAGCTAATGTGAGTTTGAACATACA 60.348 38.462 0.00 5.93 35.99 2.29
2347 6409 4.017222 TGATGATCATTCCCTGGAAAAGGT 60.017 41.667 10.14 0.00 45.78 3.50
2429 6702 3.701040 GGTGCATTATGAAGTTCATGGGT 59.299 43.478 25.48 10.34 37.70 4.51
2475 6748 6.177610 TGCCCACTATAAAACAGTCTAAAGG 58.822 40.000 0.00 0.00 0.00 3.11
2482 6755 6.717289 TCATAACTGCCCACTATAAAACAGT 58.283 36.000 0.00 0.00 39.92 3.55
2493 6766 0.676782 AGCCGTTCATAACTGCCCAC 60.677 55.000 3.06 0.00 41.80 4.61
2521 6794 5.121105 CAGGTGAAGAATCAGATGCACATA 58.879 41.667 0.00 0.00 35.88 2.29
2538 6811 5.216622 ACTTAGCATACTATTCCCAGGTGA 58.783 41.667 0.00 0.00 0.00 4.02
2539 6812 5.552870 ACTTAGCATACTATTCCCAGGTG 57.447 43.478 0.00 0.00 0.00 4.00
2542 6815 9.244292 TCACTATACTTAGCATACTATTCCCAG 57.756 37.037 0.00 0.00 0.00 4.45
2559 6832 9.166222 TGGGGTTTAATATGTCATCACTATACT 57.834 33.333 0.00 0.00 0.00 2.12
2560 6833 9.959721 ATGGGGTTTAATATGTCATCACTATAC 57.040 33.333 0.00 0.00 0.00 1.47
2564 6837 9.354673 CTTAATGGGGTTTAATATGTCATCACT 57.645 33.333 0.00 0.00 0.00 3.41
2565 6838 9.349713 TCTTAATGGGGTTTAATATGTCATCAC 57.650 33.333 0.00 0.00 0.00 3.06
2566 6839 9.573166 CTCTTAATGGGGTTTAATATGTCATCA 57.427 33.333 0.00 0.00 0.00 3.07
2567 6840 9.014297 CCTCTTAATGGGGTTTAATATGTCATC 57.986 37.037 0.00 0.00 0.00 2.92
2568 6841 7.451566 GCCTCTTAATGGGGTTTAATATGTCAT 59.548 37.037 0.00 0.00 0.00 3.06
2569 6842 6.775629 GCCTCTTAATGGGGTTTAATATGTCA 59.224 38.462 0.00 0.00 0.00 3.58
2570 6843 6.072673 CGCCTCTTAATGGGGTTTAATATGTC 60.073 42.308 4.28 0.00 33.51 3.06
2571 6844 5.768164 CGCCTCTTAATGGGGTTTAATATGT 59.232 40.000 4.28 0.00 33.51 2.29
2572 6845 5.335661 GCGCCTCTTAATGGGGTTTAATATG 60.336 44.000 0.00 0.00 39.38 1.78
2573 6846 4.765339 GCGCCTCTTAATGGGGTTTAATAT 59.235 41.667 0.00 0.00 39.38 1.28
2574 6847 4.139038 GCGCCTCTTAATGGGGTTTAATA 58.861 43.478 0.00 0.00 39.38 0.98
2575 6848 2.956333 GCGCCTCTTAATGGGGTTTAAT 59.044 45.455 0.00 0.00 39.38 1.40
2576 6849 2.025699 AGCGCCTCTTAATGGGGTTTAA 60.026 45.455 2.29 0.00 39.38 1.52
2577 6850 1.562475 AGCGCCTCTTAATGGGGTTTA 59.438 47.619 2.29 0.00 39.38 2.01
2578 6851 0.331616 AGCGCCTCTTAATGGGGTTT 59.668 50.000 2.29 1.56 39.38 3.27
2579 6852 1.141053 CTAGCGCCTCTTAATGGGGTT 59.859 52.381 2.29 8.94 39.38 4.11
2580 6853 0.759346 CTAGCGCCTCTTAATGGGGT 59.241 55.000 2.29 4.47 39.38 4.95
2581 6854 1.048601 TCTAGCGCCTCTTAATGGGG 58.951 55.000 2.29 7.16 40.05 4.96
2582 6855 2.910688 TTCTAGCGCCTCTTAATGGG 57.089 50.000 2.29 0.00 0.00 4.00
2583 6856 3.070018 CCATTCTAGCGCCTCTTAATGG 58.930 50.000 17.60 17.60 39.07 3.16
2584 6857 3.496130 CACCATTCTAGCGCCTCTTAATG 59.504 47.826 2.29 7.63 31.75 1.90
2585 6858 3.733337 CACCATTCTAGCGCCTCTTAAT 58.267 45.455 2.29 0.00 0.00 1.40
2586 6859 2.741878 GCACCATTCTAGCGCCTCTTAA 60.742 50.000 2.29 0.00 0.00 1.85
2587 6860 1.202533 GCACCATTCTAGCGCCTCTTA 60.203 52.381 2.29 0.00 0.00 2.10
2588 6861 0.462759 GCACCATTCTAGCGCCTCTT 60.463 55.000 2.29 0.00 0.00 2.85
2589 6862 1.144936 GCACCATTCTAGCGCCTCT 59.855 57.895 2.29 0.00 0.00 3.69
2590 6863 1.889573 GGCACCATTCTAGCGCCTC 60.890 63.158 2.29 0.00 39.73 4.70
2591 6864 2.190578 GGCACCATTCTAGCGCCT 59.809 61.111 2.29 0.00 39.73 5.52
2623 6896 2.569657 CAACAGCATGCGCCACAT 59.430 55.556 13.01 0.00 42.53 3.21
2624 6897 3.672447 CCAACAGCATGCGCCACA 61.672 61.111 13.01 0.00 42.53 4.17
2625 6898 3.615536 GACCAACAGCATGCGCCAC 62.616 63.158 13.01 0.00 42.53 5.01
2626 6899 3.364441 GACCAACAGCATGCGCCA 61.364 61.111 13.01 0.00 42.53 5.69
2627 6900 3.364441 TGACCAACAGCATGCGCC 61.364 61.111 13.01 0.00 42.53 6.53
2628 6901 2.126734 GTGACCAACAGCATGCGC 60.127 61.111 13.01 0.00 42.53 6.09
2629 6902 2.174107 CGTGACCAACAGCATGCG 59.826 61.111 13.01 9.99 42.53 4.73
2630 6903 2.260869 ACCGTGACCAACAGCATGC 61.261 57.895 10.51 10.51 42.53 4.06
2631 6904 0.884259 TCACCGTGACCAACAGCATG 60.884 55.000 0.00 0.00 46.00 4.06
2632 6905 0.603707 CTCACCGTGACCAACAGCAT 60.604 55.000 0.00 0.00 0.00 3.79
2633 6906 1.227527 CTCACCGTGACCAACAGCA 60.228 57.895 0.00 0.00 0.00 4.41
2634 6907 0.531974 TTCTCACCGTGACCAACAGC 60.532 55.000 0.00 0.00 0.00 4.40
2635 6908 1.867233 CTTTCTCACCGTGACCAACAG 59.133 52.381 0.00 0.00 0.00 3.16
2636 6909 1.208535 ACTTTCTCACCGTGACCAACA 59.791 47.619 0.00 0.00 0.00 3.33
2637 6910 1.949465 ACTTTCTCACCGTGACCAAC 58.051 50.000 0.00 0.00 0.00 3.77
2638 6911 2.702592 AACTTTCTCACCGTGACCAA 57.297 45.000 0.00 0.00 0.00 3.67
2639 6912 2.702592 AAACTTTCTCACCGTGACCA 57.297 45.000 0.00 0.00 0.00 4.02
2707 6980 9.883142 ACATCACAACAATCTTAAAAGGAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
2708 6981 9.528018 GACATCACAACAATCTTAAAAGGAAAA 57.472 29.630 0.00 0.00 0.00 2.29
2709 6982 8.141268 GGACATCACAACAATCTTAAAAGGAAA 58.859 33.333 0.00 0.00 0.00 3.13
2710 6983 7.286546 TGGACATCACAACAATCTTAAAAGGAA 59.713 33.333 0.00 0.00 0.00 3.36
2711 6984 6.775142 TGGACATCACAACAATCTTAAAAGGA 59.225 34.615 0.00 0.00 0.00 3.36
2712 6985 6.863126 GTGGACATCACAACAATCTTAAAAGG 59.137 38.462 0.00 0.00 45.39 3.11
2713 6986 6.578545 CGTGGACATCACAACAATCTTAAAAG 59.421 38.462 0.00 0.00 46.36 2.27
2714 6987 6.038825 ACGTGGACATCACAACAATCTTAAAA 59.961 34.615 0.00 0.00 46.36 1.52
2715 6988 5.529430 ACGTGGACATCACAACAATCTTAAA 59.471 36.000 0.00 0.00 46.36 1.52
2716 6989 5.049749 CACGTGGACATCACAACAATCTTAA 60.050 40.000 7.95 0.00 46.36 1.85
2717 6990 4.450757 CACGTGGACATCACAACAATCTTA 59.549 41.667 7.95 0.00 46.36 2.10
2718 6991 3.250762 CACGTGGACATCACAACAATCTT 59.749 43.478 7.95 0.00 46.36 2.40
2719 6992 2.807967 CACGTGGACATCACAACAATCT 59.192 45.455 7.95 0.00 46.36 2.40
2720 6993 2.805671 TCACGTGGACATCACAACAATC 59.194 45.455 17.00 0.00 46.36 2.67
2721 6994 2.844946 TCACGTGGACATCACAACAAT 58.155 42.857 17.00 0.00 46.36 2.71
2722 6995 2.317530 TCACGTGGACATCACAACAA 57.682 45.000 17.00 0.00 46.36 2.83
2723 6996 2.142319 CATCACGTGGACATCACAACA 58.858 47.619 17.00 0.00 46.36 3.33
2724 6997 1.135972 GCATCACGTGGACATCACAAC 60.136 52.381 17.00 0.00 46.36 3.32
2725 6998 1.155889 GCATCACGTGGACATCACAA 58.844 50.000 17.00 0.00 46.36 3.33
2726 6999 1.013524 CGCATCACGTGGACATCACA 61.014 55.000 17.00 0.00 46.36 3.58
2727 7000 0.735978 TCGCATCACGTGGACATCAC 60.736 55.000 17.00 0.00 44.19 3.06
2728 7001 0.458370 CTCGCATCACGTGGACATCA 60.458 55.000 17.00 0.00 44.19 3.07
2729 7002 0.179137 TCTCGCATCACGTGGACATC 60.179 55.000 17.00 0.14 44.19 3.06
2730 7003 0.246360 TTCTCGCATCACGTGGACAT 59.754 50.000 17.00 0.00 44.19 3.06
2731 7004 0.246360 ATTCTCGCATCACGTGGACA 59.754 50.000 17.00 0.00 44.19 4.02
2732 7005 0.647410 CATTCTCGCATCACGTGGAC 59.353 55.000 17.00 4.49 44.19 4.02
2733 7006 0.246360 ACATTCTCGCATCACGTGGA 59.754 50.000 17.00 3.75 44.19 4.02
2734 7007 1.078709 AACATTCTCGCATCACGTGG 58.921 50.000 17.00 0.92 44.19 4.94
2735 7008 5.635549 TTATAACATTCTCGCATCACGTG 57.364 39.130 9.94 9.94 44.19 4.49
2736 7009 6.656314 TTTTATAACATTCTCGCATCACGT 57.344 33.333 0.00 0.00 44.19 4.49
2757 7030 6.103997 GCACCTCATCATCATGTCAATTTTT 58.896 36.000 0.00 0.00 0.00 1.94
2758 7031 5.657474 GCACCTCATCATCATGTCAATTTT 58.343 37.500 0.00 0.00 0.00 1.82
2759 7032 4.201980 CGCACCTCATCATCATGTCAATTT 60.202 41.667 0.00 0.00 0.00 1.82
2760 7033 3.314357 CGCACCTCATCATCATGTCAATT 59.686 43.478 0.00 0.00 0.00 2.32
2761 7034 2.876550 CGCACCTCATCATCATGTCAAT 59.123 45.455 0.00 0.00 0.00 2.57
2762 7035 2.282407 CGCACCTCATCATCATGTCAA 58.718 47.619 0.00 0.00 0.00 3.18
2763 7036 1.944032 CGCACCTCATCATCATGTCA 58.056 50.000 0.00 0.00 0.00 3.58
2764 7037 0.585357 GCGCACCTCATCATCATGTC 59.415 55.000 0.30 0.00 0.00 3.06
2765 7038 0.107557 TGCGCACCTCATCATCATGT 60.108 50.000 5.66 0.00 0.00 3.21
2766 7039 1.235724 ATGCGCACCTCATCATCATG 58.764 50.000 14.90 0.00 0.00 3.07
2767 7040 2.038164 ACTATGCGCACCTCATCATCAT 59.962 45.455 14.90 0.00 0.00 2.45
2768 7041 1.413812 ACTATGCGCACCTCATCATCA 59.586 47.619 14.90 0.00 0.00 3.07
2769 7042 2.160822 ACTATGCGCACCTCATCATC 57.839 50.000 14.90 0.00 0.00 2.92
2770 7043 2.615447 CAAACTATGCGCACCTCATCAT 59.385 45.455 14.90 0.00 0.00 2.45
2771 7044 2.009051 CAAACTATGCGCACCTCATCA 58.991 47.619 14.90 0.00 0.00 3.07
2772 7045 1.268234 GCAAACTATGCGCACCTCATC 60.268 52.381 14.90 0.00 46.87 2.92
2773 7046 0.734889 GCAAACTATGCGCACCTCAT 59.265 50.000 14.90 0.00 46.87 2.90
2774 7047 2.170738 GCAAACTATGCGCACCTCA 58.829 52.632 14.90 0.00 46.87 3.86
2783 7056 2.095059 GGCCACTTGACAGCAAACTATG 60.095 50.000 0.00 0.00 32.73 2.23
2784 7057 2.162681 GGCCACTTGACAGCAAACTAT 58.837 47.619 0.00 0.00 32.73 2.12
2785 7058 1.604604 GGCCACTTGACAGCAAACTA 58.395 50.000 0.00 0.00 32.73 2.24
2786 7059 1.109323 GGGCCACTTGACAGCAAACT 61.109 55.000 4.39 0.00 32.73 2.66
2787 7060 1.363807 GGGCCACTTGACAGCAAAC 59.636 57.895 4.39 0.00 32.73 2.93
2788 7061 2.192861 CGGGCCACTTGACAGCAAA 61.193 57.895 4.39 0.00 32.73 3.68
2789 7062 2.594303 CGGGCCACTTGACAGCAA 60.594 61.111 4.39 0.00 0.00 3.91
2792 7065 1.973281 ATTGCGGGCCACTTGACAG 60.973 57.895 4.39 0.00 0.00 3.51
2793 7066 2.115052 ATTGCGGGCCACTTGACA 59.885 55.556 4.39 0.00 0.00 3.58
2794 7067 2.568090 CATTGCGGGCCACTTGAC 59.432 61.111 4.39 0.00 0.00 3.18
2795 7068 2.676121 CCATTGCGGGCCACTTGA 60.676 61.111 4.39 0.00 0.00 3.02
2812 7085 4.796495 CTAGTGGTTGGGGCCCGC 62.796 72.222 19.83 13.46 0.00 6.13
2813 7086 1.968050 CTACTAGTGGTTGGGGCCCG 61.968 65.000 19.83 2.78 0.00 6.13
2814 7087 0.912968 ACTACTAGTGGTTGGGGCCC 60.913 60.000 18.17 18.17 0.00 5.80
2815 7088 0.252197 CACTACTAGTGGTTGGGGCC 59.748 60.000 9.48 0.00 42.35 5.80
2816 7089 3.855159 CACTACTAGTGGTTGGGGC 57.145 57.895 9.48 0.00 42.35 5.80
2824 7097 2.488545 AGACGCTTGTCCACTACTAGTG 59.511 50.000 5.39 9.02 45.53 2.74
2825 7098 2.748532 GAGACGCTTGTCCACTACTAGT 59.251 50.000 0.00 0.00 43.97 2.57
2826 7099 2.097791 GGAGACGCTTGTCCACTACTAG 59.902 54.545 0.96 0.00 43.97 2.57
2827 7100 2.089980 GGAGACGCTTGTCCACTACTA 58.910 52.381 0.96 0.00 43.97 1.82
2828 7101 0.889306 GGAGACGCTTGTCCACTACT 59.111 55.000 0.96 0.00 43.97 2.57
2829 7102 0.601558 TGGAGACGCTTGTCCACTAC 59.398 55.000 4.80 0.00 40.28 2.73
2830 7103 3.045518 TGGAGACGCTTGTCCACTA 57.954 52.632 4.80 0.00 40.28 2.74
2831 7104 3.870955 TGGAGACGCTTGTCCACT 58.129 55.556 4.80 0.00 40.28 4.00
2834 7107 3.557595 CAGAATAATGGAGACGCTTGTCC 59.442 47.826 0.00 0.00 43.97 4.02
2835 7108 4.184629 ACAGAATAATGGAGACGCTTGTC 58.815 43.478 0.00 0.00 43.21 3.18
2836 7109 4.207891 ACAGAATAATGGAGACGCTTGT 57.792 40.909 0.00 0.00 0.00 3.16
2837 7110 5.812642 AGTAACAGAATAATGGAGACGCTTG 59.187 40.000 0.00 0.00 0.00 4.01
2838 7111 5.978814 AGTAACAGAATAATGGAGACGCTT 58.021 37.500 0.00 0.00 0.00 4.68
2839 7112 5.599999 AGTAACAGAATAATGGAGACGCT 57.400 39.130 0.00 0.00 0.00 5.07
2840 7113 7.766219 TTTAGTAACAGAATAATGGAGACGC 57.234 36.000 0.00 0.00 0.00 5.19
2841 7114 9.314321 ACATTTAGTAACAGAATAATGGAGACG 57.686 33.333 0.00 0.00 0.00 4.18
2857 7130 9.444600 GAGATGGACAAAGGTTACATTTAGTAA 57.555 33.333 0.00 0.00 40.30 2.24
2858 7131 8.822805 AGAGATGGACAAAGGTTACATTTAGTA 58.177 33.333 0.00 0.00 0.00 1.82
2859 7132 7.690256 AGAGATGGACAAAGGTTACATTTAGT 58.310 34.615 0.00 0.00 0.00 2.24
2860 7133 9.319143 CTAGAGATGGACAAAGGTTACATTTAG 57.681 37.037 0.00 0.00 0.00 1.85
2861 7134 8.822805 ACTAGAGATGGACAAAGGTTACATTTA 58.177 33.333 0.00 0.00 0.00 1.40
2862 7135 7.690256 ACTAGAGATGGACAAAGGTTACATTT 58.310 34.615 0.00 0.00 0.00 2.32
2863 7136 7.181125 AGACTAGAGATGGACAAAGGTTACATT 59.819 37.037 0.00 0.00 0.00 2.71
2864 7137 6.670027 AGACTAGAGATGGACAAAGGTTACAT 59.330 38.462 0.00 0.00 0.00 2.29
2865 7138 6.017192 AGACTAGAGATGGACAAAGGTTACA 58.983 40.000 0.00 0.00 0.00 2.41
2866 7139 6.532988 AGACTAGAGATGGACAAAGGTTAC 57.467 41.667 0.00 0.00 0.00 2.50
2867 7140 6.127703 CGAAGACTAGAGATGGACAAAGGTTA 60.128 42.308 0.00 0.00 0.00 2.85
2868 7141 5.336849 CGAAGACTAGAGATGGACAAAGGTT 60.337 44.000 0.00 0.00 0.00 3.50
2869 7142 4.158764 CGAAGACTAGAGATGGACAAAGGT 59.841 45.833 0.00 0.00 0.00 3.50
2870 7143 4.399618 TCGAAGACTAGAGATGGACAAAGG 59.600 45.833 0.00 0.00 0.00 3.11
2871 7144 5.568685 TCGAAGACTAGAGATGGACAAAG 57.431 43.478 0.00 0.00 0.00 2.77
2872 7145 4.142359 GCTCGAAGACTAGAGATGGACAAA 60.142 45.833 10.93 0.00 36.65 2.83
2873 7146 3.378742 GCTCGAAGACTAGAGATGGACAA 59.621 47.826 10.93 0.00 36.65 3.18
2874 7147 2.946329 GCTCGAAGACTAGAGATGGACA 59.054 50.000 10.93 0.00 36.65 4.02
2875 7148 3.003275 CAGCTCGAAGACTAGAGATGGAC 59.997 52.174 14.70 0.00 44.40 4.02
2876 7149 3.210227 CAGCTCGAAGACTAGAGATGGA 58.790 50.000 14.70 0.00 44.40 3.41
2877 7150 3.624326 CAGCTCGAAGACTAGAGATGG 57.376 52.381 14.70 1.82 44.40 3.51
2879 7152 7.575414 TTATTTCAGCTCGAAGACTAGAGAT 57.425 36.000 10.93 3.05 36.65 2.75
2880 7153 7.283354 TCATTATTTCAGCTCGAAGACTAGAGA 59.717 37.037 10.93 0.00 36.65 3.10
2881 7154 7.421599 TCATTATTTCAGCTCGAAGACTAGAG 58.578 38.462 0.00 4.08 34.32 2.43
2882 7155 7.067615 ACTCATTATTTCAGCTCGAAGACTAGA 59.932 37.037 0.00 0.00 34.32 2.43
2883 7156 7.199766 ACTCATTATTTCAGCTCGAAGACTAG 58.800 38.462 0.00 0.00 34.32 2.57
2884 7157 7.101652 ACTCATTATTTCAGCTCGAAGACTA 57.898 36.000 0.00 0.00 34.32 2.59
2885 7158 5.971763 ACTCATTATTTCAGCTCGAAGACT 58.028 37.500 0.00 0.00 34.32 3.24
2886 7159 6.654793 AACTCATTATTTCAGCTCGAAGAC 57.345 37.500 0.00 0.00 34.32 3.01
2887 7160 7.817478 TGTTAACTCATTATTTCAGCTCGAAGA 59.183 33.333 7.22 0.00 34.32 2.87
2888 7161 7.963981 TGTTAACTCATTATTTCAGCTCGAAG 58.036 34.615 7.22 0.00 34.32 3.79
2889 7162 7.899178 TGTTAACTCATTATTTCAGCTCGAA 57.101 32.000 7.22 0.00 0.00 3.71
2890 7163 7.981789 AGATGTTAACTCATTATTTCAGCTCGA 59.018 33.333 7.22 0.00 0.00 4.04
2891 7164 8.136057 AGATGTTAACTCATTATTTCAGCTCG 57.864 34.615 7.22 0.00 0.00 5.03
2892 7165 9.102757 TGAGATGTTAACTCATTATTTCAGCTC 57.897 33.333 7.22 0.00 39.10 4.09
2893 7166 8.887717 GTGAGATGTTAACTCATTATTTCAGCT 58.112 33.333 7.22 0.00 44.41 4.24
2894 7167 8.887717 AGTGAGATGTTAACTCATTATTTCAGC 58.112 33.333 7.22 0.00 44.41 4.26
2900 7173 9.486497 CAGCATAGTGAGATGTTAACTCATTAT 57.514 33.333 7.22 6.39 43.15 1.28
2901 7174 8.478066 ACAGCATAGTGAGATGTTAACTCATTA 58.522 33.333 7.22 4.37 44.41 1.90
2902 7175 7.279536 CACAGCATAGTGAGATGTTAACTCATT 59.720 37.037 7.22 2.23 44.41 2.57
2903 7176 6.760298 CACAGCATAGTGAGATGTTAACTCAT 59.240 38.462 7.22 0.00 44.41 2.90
2904 7177 6.101997 CACAGCATAGTGAGATGTTAACTCA 58.898 40.000 7.22 0.00 42.05 3.41
2905 7178 5.521735 CCACAGCATAGTGAGATGTTAACTC 59.478 44.000 7.22 2.34 42.05 3.01
2906 7179 5.423015 CCACAGCATAGTGAGATGTTAACT 58.577 41.667 7.22 0.00 42.05 2.24
2907 7180 4.572389 CCCACAGCATAGTGAGATGTTAAC 59.428 45.833 0.00 0.00 42.05 2.01
2908 7181 4.384098 CCCCACAGCATAGTGAGATGTTAA 60.384 45.833 5.65 0.00 42.05 2.01
2909 7182 3.134623 CCCCACAGCATAGTGAGATGTTA 59.865 47.826 5.65 0.00 42.05 2.41
2910 7183 2.092753 CCCCACAGCATAGTGAGATGTT 60.093 50.000 5.65 0.00 42.05 2.71
2911 7184 1.487976 CCCCACAGCATAGTGAGATGT 59.512 52.381 5.65 0.00 42.05 3.06
2912 7185 1.764723 TCCCCACAGCATAGTGAGATG 59.235 52.381 5.65 0.00 42.05 2.90
2913 7186 2.180946 TCCCCACAGCATAGTGAGAT 57.819 50.000 5.65 0.00 42.05 2.75
2914 7187 2.171237 CAATCCCCACAGCATAGTGAGA 59.829 50.000 5.65 3.27 42.05 3.27
2915 7188 2.092753 ACAATCCCCACAGCATAGTGAG 60.093 50.000 5.65 0.00 42.05 3.51
2916 7189 1.915489 ACAATCCCCACAGCATAGTGA 59.085 47.619 5.65 0.00 42.05 3.41
2917 7190 2.425143 ACAATCCCCACAGCATAGTG 57.575 50.000 0.00 0.00 39.21 2.74
2918 7191 2.843730 TGTACAATCCCCACAGCATAGT 59.156 45.455 0.00 0.00 0.00 2.12
2919 7192 3.558931 TGTACAATCCCCACAGCATAG 57.441 47.619 0.00 0.00 0.00 2.23
2920 7193 3.371487 CCTTGTACAATCCCCACAGCATA 60.371 47.826 9.13 0.00 0.00 3.14
2921 7194 2.621407 CCTTGTACAATCCCCACAGCAT 60.621 50.000 9.13 0.00 0.00 3.79
2922 7195 1.271871 CCTTGTACAATCCCCACAGCA 60.272 52.381 9.13 0.00 0.00 4.41
2923 7196 1.463674 CCTTGTACAATCCCCACAGC 58.536 55.000 9.13 0.00 0.00 4.40
2924 7197 1.955208 GCCCTTGTACAATCCCCACAG 60.955 57.143 9.13 0.00 0.00 3.66
2925 7198 0.039035 GCCCTTGTACAATCCCCACA 59.961 55.000 9.13 0.00 0.00 4.17
2926 7199 0.039035 TGCCCTTGTACAATCCCCAC 59.961 55.000 9.13 0.00 0.00 4.61
2927 7200 1.006813 ATGCCCTTGTACAATCCCCA 58.993 50.000 9.13 4.96 0.00 4.96
2928 7201 1.215423 AGATGCCCTTGTACAATCCCC 59.785 52.381 9.13 0.00 0.00 4.81
2929 7202 2.173569 AGAGATGCCCTTGTACAATCCC 59.826 50.000 9.13 0.94 0.00 3.85
2930 7203 3.567478 AGAGATGCCCTTGTACAATCC 57.433 47.619 9.13 1.29 0.00 3.01
2931 7204 4.061596 GCTAGAGATGCCCTTGTACAATC 58.938 47.826 9.13 3.34 0.00 2.67
2932 7205 3.181450 GGCTAGAGATGCCCTTGTACAAT 60.181 47.826 9.13 0.00 44.32 2.71
2933 7206 2.170607 GGCTAGAGATGCCCTTGTACAA 59.829 50.000 8.28 8.28 44.32 2.41
2934 7207 1.762957 GGCTAGAGATGCCCTTGTACA 59.237 52.381 0.00 0.00 44.32 2.90
2935 7208 2.535012 GGCTAGAGATGCCCTTGTAC 57.465 55.000 0.00 0.00 44.32 2.90
2941 7214 1.893919 GGGATCGGCTAGAGATGCCC 61.894 65.000 20.83 17.24 46.70 5.36
2942 7215 1.594310 GGGATCGGCTAGAGATGCC 59.406 63.158 18.32 18.32 46.51 4.40
2943 7216 0.902516 AGGGGATCGGCTAGAGATGC 60.903 60.000 10.29 10.29 36.00 3.91
2944 7217 2.516227 TAGGGGATCGGCTAGAGATG 57.484 55.000 5.96 0.00 0.00 2.90
2945 7218 3.544698 TTTAGGGGATCGGCTAGAGAT 57.455 47.619 0.00 0.00 0.00 2.75
2946 7219 3.323774 TTTTAGGGGATCGGCTAGAGA 57.676 47.619 0.00 0.00 0.00 3.10
2947 7220 4.625607 AATTTTAGGGGATCGGCTAGAG 57.374 45.455 0.00 0.00 0.00 2.43
2948 7221 5.011738 CACTAATTTTAGGGGATCGGCTAGA 59.988 44.000 0.00 0.00 35.08 2.43
2949 7222 5.011738 TCACTAATTTTAGGGGATCGGCTAG 59.988 44.000 0.00 0.00 34.90 3.42
2950 7223 4.903049 TCACTAATTTTAGGGGATCGGCTA 59.097 41.667 0.00 0.00 34.90 3.93
2951 7224 3.714798 TCACTAATTTTAGGGGATCGGCT 59.285 43.478 0.00 0.00 34.90 5.52
2952 7225 4.081322 TCACTAATTTTAGGGGATCGGC 57.919 45.455 0.00 0.00 34.90 5.54
2953 7226 5.681639 ACTTCACTAATTTTAGGGGATCGG 58.318 41.667 0.00 0.00 34.90 4.18
2954 7227 8.726870 TTTACTTCACTAATTTTAGGGGATCG 57.273 34.615 0.00 0.00 34.90 3.69
2980 7253 8.253810 GGCTAGGCTAAAAGAATTGAGATTTTT 58.746 33.333 9.46 0.00 0.00 1.94
2981 7254 7.397192 TGGCTAGGCTAAAAGAATTGAGATTTT 59.603 33.333 18.18 0.00 0.00 1.82
2982 7255 6.891908 TGGCTAGGCTAAAAGAATTGAGATTT 59.108 34.615 18.18 0.00 0.00 2.17
2983 7256 6.319911 GTGGCTAGGCTAAAAGAATTGAGATT 59.680 38.462 18.18 0.00 0.00 2.40
2984 7257 5.825151 GTGGCTAGGCTAAAAGAATTGAGAT 59.175 40.000 18.18 0.00 0.00 2.75
2985 7258 5.186198 GTGGCTAGGCTAAAAGAATTGAGA 58.814 41.667 18.18 0.00 0.00 3.27
2986 7259 4.943705 TGTGGCTAGGCTAAAAGAATTGAG 59.056 41.667 18.18 0.00 0.00 3.02
2987 7260 4.917385 TGTGGCTAGGCTAAAAGAATTGA 58.083 39.130 18.18 0.00 0.00 2.57
2988 7261 5.357878 TCATGTGGCTAGGCTAAAAGAATTG 59.642 40.000 18.18 2.98 0.00 2.32
2989 7262 5.509498 TCATGTGGCTAGGCTAAAAGAATT 58.491 37.500 18.18 0.00 0.00 2.17
2990 7263 5.116084 TCATGTGGCTAGGCTAAAAGAAT 57.884 39.130 18.18 0.00 0.00 2.40
2991 7264 4.568072 TCATGTGGCTAGGCTAAAAGAA 57.432 40.909 18.18 0.00 0.00 2.52
2992 7265 4.261801 GTTCATGTGGCTAGGCTAAAAGA 58.738 43.478 18.18 6.41 0.00 2.52
2993 7266 4.009675 TGTTCATGTGGCTAGGCTAAAAG 58.990 43.478 18.18 4.14 0.00 2.27
2994 7267 4.027674 TGTTCATGTGGCTAGGCTAAAA 57.972 40.909 18.18 0.67 0.00 1.52
2995 7268 3.712016 TGTTCATGTGGCTAGGCTAAA 57.288 42.857 18.18 3.26 0.00 1.85
2996 7269 3.199727 TGATGTTCATGTGGCTAGGCTAA 59.800 43.478 18.18 5.90 0.00 3.09
2997 7270 2.771372 TGATGTTCATGTGGCTAGGCTA 59.229 45.455 18.18 7.06 0.00 3.93
2998 7271 1.561076 TGATGTTCATGTGGCTAGGCT 59.439 47.619 18.18 0.00 0.00 4.58
2999 7272 2.042686 TGATGTTCATGTGGCTAGGC 57.957 50.000 9.85 9.85 0.00 3.93
3000 7273 3.758023 TGTTTGATGTTCATGTGGCTAGG 59.242 43.478 0.00 0.00 0.00 3.02
3001 7274 5.048504 AGTTGTTTGATGTTCATGTGGCTAG 60.049 40.000 0.00 0.00 0.00 3.42
3002 7275 4.826733 AGTTGTTTGATGTTCATGTGGCTA 59.173 37.500 0.00 0.00 0.00 3.93
3003 7276 3.638160 AGTTGTTTGATGTTCATGTGGCT 59.362 39.130 0.00 0.00 0.00 4.75
3004 7277 3.737266 CAGTTGTTTGATGTTCATGTGGC 59.263 43.478 0.00 0.00 0.00 5.01
3005 7278 3.737266 GCAGTTGTTTGATGTTCATGTGG 59.263 43.478 0.00 0.00 0.00 4.17
3006 7279 4.361420 TGCAGTTGTTTGATGTTCATGTG 58.639 39.130 0.00 0.00 0.00 3.21
3007 7280 4.652421 TGCAGTTGTTTGATGTTCATGT 57.348 36.364 0.00 0.00 0.00 3.21
3008 7281 7.821595 ATTATGCAGTTGTTTGATGTTCATG 57.178 32.000 0.00 0.00 0.00 3.07
3045 7318 9.950858 CGCGTGTTTATTTTGAAATATTTGAAT 57.049 25.926 5.17 5.97 31.47 2.57
3046 7319 8.969267 ACGCGTGTTTATTTTGAAATATTTGAA 58.031 25.926 12.93 0.00 31.47 2.69
3047 7320 8.508800 ACGCGTGTTTATTTTGAAATATTTGA 57.491 26.923 12.93 0.00 31.47 2.69
3051 7324 9.562583 ACATTACGCGTGTTTATTTTGAAATAT 57.437 25.926 24.59 0.00 31.47 1.28
3052 7325 8.951954 ACATTACGCGTGTTTATTTTGAAATA 57.048 26.923 24.59 0.00 0.00 1.40
3053 7326 7.861176 ACATTACGCGTGTTTATTTTGAAAT 57.139 28.000 24.59 5.79 0.00 2.17
3054 7327 8.951954 ATACATTACGCGTGTTTATTTTGAAA 57.048 26.923 24.59 3.20 0.00 2.69
3058 7331 9.276397 GGTTTATACATTACGCGTGTTTATTTT 57.724 29.630 24.59 2.32 0.00 1.82
3059 7332 8.449397 TGGTTTATACATTACGCGTGTTTATTT 58.551 29.630 24.59 5.76 0.00 1.40
3060 7333 7.972527 TGGTTTATACATTACGCGTGTTTATT 58.027 30.769 24.59 5.37 0.00 1.40
3061 7334 7.536895 TGGTTTATACATTACGCGTGTTTAT 57.463 32.000 24.59 14.89 0.00 1.40
3062 7335 6.957984 TGGTTTATACATTACGCGTGTTTA 57.042 33.333 24.59 8.18 0.00 2.01
3063 7336 5.859521 TGGTTTATACATTACGCGTGTTT 57.140 34.783 24.59 9.24 0.00 2.83
3064 7337 6.425577 AATGGTTTATACATTACGCGTGTT 57.574 33.333 24.59 5.89 36.82 3.32
3065 7338 7.064371 TGTTAATGGTTTATACATTACGCGTGT 59.936 33.333 24.59 14.38 39.69 4.49
3066 7339 7.400301 TGTTAATGGTTTATACATTACGCGTG 58.600 34.615 24.59 8.01 39.69 5.34
3067 7340 7.536895 TGTTAATGGTTTATACATTACGCGT 57.463 32.000 19.17 19.17 39.69 6.01
3068 7341 8.726836 GTTTGTTAATGGTTTATACATTACGCG 58.273 33.333 3.53 3.53 39.69 6.01
3069 7342 9.557338 TGTTTGTTAATGGTTTATACATTACGC 57.443 29.630 0.00 0.00 39.69 4.42
3092 7365 9.847224 ATATCTCCATCCGTTAAACTAAATGTT 57.153 29.630 0.00 0.00 41.29 2.71
3093 7366 9.847224 AATATCTCCATCCGTTAAACTAAATGT 57.153 29.630 0.00 0.00 0.00 2.71
3096 7369 9.893634 TTGAATATCTCCATCCGTTAAACTAAA 57.106 29.630 0.00 0.00 0.00 1.85
3097 7370 9.893634 TTTGAATATCTCCATCCGTTAAACTAA 57.106 29.630 0.00 0.00 0.00 2.24
3099 7372 8.980481 ATTTGAATATCTCCATCCGTTAAACT 57.020 30.769 0.00 0.00 0.00 2.66
3105 7378 9.184523 TGTTTTAATTTGAATATCTCCATCCGT 57.815 29.630 0.00 0.00 0.00 4.69
3106 7379 9.450807 GTGTTTTAATTTGAATATCTCCATCCG 57.549 33.333 0.00 0.00 0.00 4.18
3122 7395 9.903682 CTGATGTCTTTCAGATGTGTTTTAATT 57.096 29.630 0.00 0.00 44.88 1.40
3123 7396 9.288576 TCTGATGTCTTTCAGATGTGTTTTAAT 57.711 29.630 0.17 0.00 45.49 1.40
3124 7397 8.675705 TCTGATGTCTTTCAGATGTGTTTTAA 57.324 30.769 0.17 0.00 45.49 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.