Multiple sequence alignment - TraesCS7A01G419400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G419400 chr7A 100.000 3816 0 0 1 3816 610931163 610934978 0.000000e+00 7047
1 TraesCS7A01G419400 chr7A 81.911 293 35 10 517 792 525546337 525546046 8.240000e-57 231
2 TraesCS7A01G419400 chr7B 89.168 1948 147 34 1 1928 569953814 569955717 0.000000e+00 2370
3 TraesCS7A01G419400 chr7B 94.517 1222 43 11 2054 3263 569955866 569957075 0.000000e+00 1864
4 TraesCS7A01G419400 chr7D 86.883 1944 171 34 1 1903 530678224 530680124 0.000000e+00 2100
5 TraesCS7A01G419400 chr7D 92.552 1450 53 26 2036 3447 530680163 530681595 0.000000e+00 2028
6 TraesCS7A01G419400 chr6A 91.509 636 52 2 2175 2809 86118148 86118782 0.000000e+00 874
7 TraesCS7A01G419400 chr6A 85.470 117 17 0 1205 1321 86116085 86116201 5.180000e-24 122
8 TraesCS7A01G419400 chr6B 90.769 650 56 4 2165 2812 143516843 143517490 0.000000e+00 865
9 TraesCS7A01G419400 chr6B 90.154 650 60 4 2165 2812 143605231 143605878 0.000000e+00 843
10 TraesCS7A01G419400 chr6D 90.293 649 61 2 2165 2812 68510048 68510695 0.000000e+00 848


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G419400 chr7A 610931163 610934978 3815 False 7047 7047 100.0000 1 3816 1 chr7A.!!$F1 3815
1 TraesCS7A01G419400 chr7B 569953814 569957075 3261 False 2117 2370 91.8425 1 3263 2 chr7B.!!$F1 3262
2 TraesCS7A01G419400 chr7D 530678224 530681595 3371 False 2064 2100 89.7175 1 3447 2 chr7D.!!$F1 3446
3 TraesCS7A01G419400 chr6A 86116085 86118782 2697 False 498 874 88.4895 1205 2809 2 chr6A.!!$F1 1604
4 TraesCS7A01G419400 chr6B 143516843 143517490 647 False 865 865 90.7690 2165 2812 1 chr6B.!!$F1 647
5 TraesCS7A01G419400 chr6B 143605231 143605878 647 False 843 843 90.1540 2165 2812 1 chr6B.!!$F2 647
6 TraesCS7A01G419400 chr6D 68510048 68510695 647 False 848 848 90.2930 2165 2812 1 chr6D.!!$F1 647

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
371 393 0.027194 CGCTGTTTCGGCTGATGATG 59.973 55.0 0.0 0.0 32.89 3.07 F
506 537 0.105039 ATGTAGCTCTACTTGGCGGC 59.895 55.0 0.0 0.0 37.00 6.53 F
561 592 0.250467 AGCTTGTGTGCTAGTGGTGG 60.250 55.0 0.0 0.0 42.10 4.61 F
563 594 0.250467 CTTGTGTGCTAGTGGTGGCT 60.250 55.0 0.0 0.0 0.00 4.75 F
566 597 0.320374 GTGTGCTAGTGGTGGCTGTA 59.680 55.0 0.0 0.0 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1728 2784 0.385974 GGAGCATGTCAAACACACGC 60.386 55.0 0.00 0.00 44.94 5.34 R
2374 3760 0.901827 ACAGGTCACACAGTGTGTCA 59.098 50.0 28.97 11.62 43.92 3.58 R
2569 3955 0.610174 GCAGGTCAGTGGTGATGAGA 59.390 55.0 0.00 0.00 34.36 3.27 R
2593 3979 0.657840 GCTGGACATCAATACCACGC 59.342 55.0 0.00 0.00 0.00 5.34 R
2830 4216 3.053826 ACCCCCTTACCATATGTTCTCC 58.946 50.0 1.24 0.00 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 121 1.074850 CCCCTCTCCCTCCCTCTTC 60.075 68.421 0.00 0.00 0.00 2.87
144 154 2.805353 TGTCTCGCTTCGCTTCGC 60.805 61.111 0.00 0.00 0.00 4.70
145 155 2.505118 GTCTCGCTTCGCTTCGCT 60.505 61.111 0.00 0.00 0.00 4.93
146 156 2.089349 GTCTCGCTTCGCTTCGCTT 61.089 57.895 0.00 0.00 0.00 4.68
147 157 1.801913 TCTCGCTTCGCTTCGCTTC 60.802 57.895 0.00 0.00 0.00 3.86
148 158 3.119360 CTCGCTTCGCTTCGCTTCG 62.119 63.158 0.00 0.00 0.00 3.79
149 159 4.835306 CGCTTCGCTTCGCTTCGC 62.835 66.667 0.00 0.00 0.00 4.70
226 236 2.512515 GGATCTGGGTCGCTGTGC 60.513 66.667 0.00 0.00 0.00 4.57
249 259 3.255379 GATCTGCGTCGGTTCGGC 61.255 66.667 0.00 0.00 0.00 5.54
269 279 2.354403 GCGGGTGAAGCTAGGTTTTCTA 60.354 50.000 8.87 0.00 0.00 2.10
271 281 3.056035 CGGGTGAAGCTAGGTTTTCTACT 60.056 47.826 8.87 0.00 0.00 2.57
274 284 3.368236 GTGAAGCTAGGTTTTCTACTGCG 59.632 47.826 8.87 0.00 0.00 5.18
279 289 1.349067 AGGTTTTCTACTGCGGGAGT 58.651 50.000 4.22 7.47 38.88 3.85
307 317 5.526115 GGTTTTAGGGTTAAGCTGTTTGTC 58.474 41.667 4.41 0.00 0.00 3.18
371 393 0.027194 CGCTGTTTCGGCTGATGATG 59.973 55.000 0.00 0.00 32.89 3.07
378 401 2.768253 TCGGCTGATGATGTGTTCTT 57.232 45.000 0.00 0.00 0.00 2.52
384 407 5.163723 CGGCTGATGATGTGTTCTTGTTATT 60.164 40.000 0.00 0.00 0.00 1.40
389 412 6.375174 TGATGATGTGTTCTTGTTATTCAGGG 59.625 38.462 0.00 0.00 0.00 4.45
425 449 3.975992 CGATGCGCTTTAGCTGTTT 57.024 47.368 9.73 0.00 39.32 2.83
430 454 2.458951 TGCGCTTTAGCTGTTTTGTTG 58.541 42.857 9.73 0.00 39.32 3.33
431 455 1.786579 GCGCTTTAGCTGTTTTGTTGG 59.213 47.619 0.00 0.00 39.32 3.77
444 473 6.073276 GCTGTTTTGTTGGGGATTTGTTATTC 60.073 38.462 0.00 0.00 0.00 1.75
446 475 4.792521 TTGTTGGGGATTTGTTATTCCG 57.207 40.909 0.00 0.00 32.48 4.30
450 481 2.291282 TGGGGATTTGTTATTCCGCTGT 60.291 45.455 7.42 0.00 43.42 4.40
453 484 3.065371 GGGATTTGTTATTCCGCTGTGAG 59.935 47.826 0.00 0.00 32.48 3.51
467 498 3.363378 CGCTGTGAGAAAAGCTTGTGTAG 60.363 47.826 0.00 0.00 37.27 2.74
475 506 2.100605 AAGCTTGTGTAGGTAGCTGC 57.899 50.000 4.27 3.46 44.05 5.25
476 507 1.270907 AGCTTGTGTAGGTAGCTGCT 58.729 50.000 7.57 7.57 43.25 4.24
478 509 2.039084 AGCTTGTGTAGGTAGCTGCTTT 59.961 45.455 7.79 0.00 43.25 3.51
479 510 2.160417 GCTTGTGTAGGTAGCTGCTTTG 59.840 50.000 7.79 1.11 32.26 2.77
481 512 1.974957 TGTGTAGGTAGCTGCTTTGGA 59.025 47.619 7.79 0.00 0.00 3.53
485 516 2.191128 AGGTAGCTGCTTTGGACTTG 57.809 50.000 7.79 0.00 0.00 3.16
490 521 3.146104 AGCTGCTTTGGACTTGTATGT 57.854 42.857 0.00 0.00 0.00 2.29
495 526 4.253685 TGCTTTGGACTTGTATGTAGCTC 58.746 43.478 0.00 0.00 0.00 4.09
501 532 6.208988 TGGACTTGTATGTAGCTCTACTTG 57.791 41.667 8.34 0.00 37.00 3.16
503 534 5.012328 ACTTGTATGTAGCTCTACTTGGC 57.988 43.478 8.34 0.00 37.00 4.52
506 537 0.105039 ATGTAGCTCTACTTGGCGGC 59.895 55.000 0.00 0.00 37.00 6.53
508 539 2.782222 TAGCTCTACTTGGCGGCGG 61.782 63.158 9.78 1.94 0.00 6.13
523 554 3.283684 CGGCGCCCTGTGTTTTGA 61.284 61.111 23.46 0.00 0.00 2.69
529 560 0.961019 GCCCTGTGTTTTGATGCTCA 59.039 50.000 0.00 0.00 0.00 4.26
533 564 3.551454 CCCTGTGTTTTGATGCTCAGTTG 60.551 47.826 0.00 0.00 0.00 3.16
554 585 1.676916 GCTGGATGAGCTTGTGTGCTA 60.677 52.381 0.00 0.00 45.21 3.49
555 586 2.277969 CTGGATGAGCTTGTGTGCTAG 58.722 52.381 0.00 0.00 44.17 3.42
556 587 1.625315 TGGATGAGCTTGTGTGCTAGT 59.375 47.619 0.00 0.00 44.17 2.57
557 588 2.005451 GGATGAGCTTGTGTGCTAGTG 58.995 52.381 0.00 0.00 44.17 2.74
558 589 2.005451 GATGAGCTTGTGTGCTAGTGG 58.995 52.381 0.00 0.00 44.17 4.00
559 590 0.758734 TGAGCTTGTGTGCTAGTGGT 59.241 50.000 0.00 0.00 44.17 4.16
560 591 1.151668 GAGCTTGTGTGCTAGTGGTG 58.848 55.000 0.00 0.00 44.17 4.17
561 592 0.250467 AGCTTGTGTGCTAGTGGTGG 60.250 55.000 0.00 0.00 42.10 4.61
562 593 1.856265 GCTTGTGTGCTAGTGGTGGC 61.856 60.000 0.00 0.00 0.00 5.01
563 594 0.250467 CTTGTGTGCTAGTGGTGGCT 60.250 55.000 0.00 0.00 0.00 4.75
564 595 0.534877 TTGTGTGCTAGTGGTGGCTG 60.535 55.000 0.00 0.00 0.00 4.85
565 596 1.071471 GTGTGCTAGTGGTGGCTGT 59.929 57.895 0.00 0.00 0.00 4.40
566 597 0.320374 GTGTGCTAGTGGTGGCTGTA 59.680 55.000 0.00 0.00 0.00 2.74
567 598 1.066143 GTGTGCTAGTGGTGGCTGTAT 60.066 52.381 0.00 0.00 0.00 2.29
577 608 3.056607 GTGGTGGCTGTATGCTGAAATTT 60.057 43.478 0.00 0.00 42.39 1.82
584 615 4.475028 CTGTATGCTGAAATTTTGCGTGA 58.525 39.130 16.86 7.11 0.00 4.35
586 617 5.468592 TGTATGCTGAAATTTTGCGTGATT 58.531 33.333 16.86 3.53 0.00 2.57
591 622 2.475864 TGAAATTTTGCGTGATTGCTGC 59.524 40.909 0.00 0.00 35.36 5.25
607 638 1.702886 CTGCGAGGACAGTTGTAGTG 58.297 55.000 0.00 0.00 32.78 2.74
619 650 0.764890 TTGTAGTGGGCAAGCTCTGT 59.235 50.000 0.00 0.00 0.00 3.41
638 670 6.980978 GCTCTGTCTAGTTATATTGAGCACAA 59.019 38.462 0.00 0.00 43.33 3.33
644 676 9.331282 GTCTAGTTATATTGAGCACAAAGGAAT 57.669 33.333 0.00 0.00 39.54 3.01
645 677 9.547753 TCTAGTTATATTGAGCACAAAGGAATC 57.452 33.333 0.00 0.00 39.54 2.52
648 680 7.284034 AGTTATATTGAGCACAAAGGAATCAGG 59.716 37.037 0.00 0.00 39.54 3.86
650 682 2.507484 TGAGCACAAAGGAATCAGGTG 58.493 47.619 0.00 0.00 0.00 4.00
651 683 3.800628 GCACAAAGGAATCAGGTGC 57.199 52.632 0.00 0.00 46.53 5.01
654 686 3.498927 CACAAAGGAATCAGGTGCATC 57.501 47.619 0.00 0.00 0.00 3.91
663 695 6.904626 AGGAATCAGGTGCATCTAGTTATTT 58.095 36.000 0.00 0.00 0.00 1.40
665 697 7.836183 AGGAATCAGGTGCATCTAGTTATTTTT 59.164 33.333 0.00 0.00 0.00 1.94
666 698 7.917505 GGAATCAGGTGCATCTAGTTATTTTTG 59.082 37.037 0.00 0.00 0.00 2.44
667 699 6.194796 TCAGGTGCATCTAGTTATTTTTGC 57.805 37.500 0.00 0.00 0.00 3.68
668 700 5.125417 TCAGGTGCATCTAGTTATTTTTGCC 59.875 40.000 0.00 0.00 0.00 4.52
669 701 4.096382 AGGTGCATCTAGTTATTTTTGCCG 59.904 41.667 0.00 0.00 0.00 5.69
672 704 5.861787 GTGCATCTAGTTATTTTTGCCGTTT 59.138 36.000 0.00 0.00 0.00 3.60
673 705 5.861251 TGCATCTAGTTATTTTTGCCGTTTG 59.139 36.000 0.00 0.00 0.00 2.93
674 706 5.220209 GCATCTAGTTATTTTTGCCGTTTGC 60.220 40.000 0.00 0.00 41.77 3.68
690 722 3.742882 CGTTTGCTCTCTTGACAATCTGA 59.257 43.478 0.00 0.00 0.00 3.27
694 726 3.750130 TGCTCTCTTGACAATCTGAAAGC 59.250 43.478 0.00 0.00 0.00 3.51
717 749 3.096092 AGTGTCAAGGGCAAGTTTTTGA 58.904 40.909 0.00 0.00 36.36 2.69
718 750 3.131046 AGTGTCAAGGGCAAGTTTTTGAG 59.869 43.478 0.00 0.00 36.36 3.02
719 751 3.096092 TGTCAAGGGCAAGTTTTTGAGT 58.904 40.909 0.00 0.00 36.36 3.41
723 757 3.525268 AGGGCAAGTTTTTGAGTTGTG 57.475 42.857 0.00 0.00 40.21 3.33
728 762 3.786048 GCAAGTTTTTGAGTTGTGTCTCG 59.214 43.478 0.00 0.00 40.21 4.04
730 764 4.600012 AGTTTTTGAGTTGTGTCTCGTG 57.400 40.909 0.00 0.00 37.28 4.35
733 767 2.951457 TTGAGTTGTGTCTCGTGTGA 57.049 45.000 0.00 0.00 37.28 3.58
744 778 4.329801 GTGTCTCGTGTGATGCATATGAAA 59.670 41.667 6.97 0.00 0.00 2.69
749 783 6.018507 TCTCGTGTGATGCATATGAAATCTTG 60.019 38.462 6.97 1.65 0.00 3.02
755 789 4.906065 TGCATATGAAATCTTGTCTGGC 57.094 40.909 6.97 0.00 0.00 4.85
757 791 4.337274 TGCATATGAAATCTTGTCTGGCTG 59.663 41.667 6.97 0.00 0.00 4.85
763 797 6.252599 TGAAATCTTGTCTGGCTGGTATAT 57.747 37.500 0.00 0.00 0.00 0.86
783 817 7.385752 GGTATATGTTTGCAATGGATTCAATGG 59.614 37.037 0.00 0.00 0.00 3.16
807 841 6.070938 GGTATTAACTGGGTTCTGTGTAGACT 60.071 42.308 0.00 0.00 31.21 3.24
822 856 5.779922 GTGTAGACTTGTCCATACACAGAA 58.220 41.667 19.43 0.00 44.66 3.02
826 860 5.728471 AGACTTGTCCATACACAGAATGAG 58.272 41.667 0.00 0.00 39.69 2.90
831 865 7.550551 ACTTGTCCATACACAGAATGAGTTATG 59.449 37.037 0.00 0.00 36.13 1.90
843 877 7.147880 ACAGAATGAGTTATGTGGAGGTAGTAC 60.148 40.741 0.00 0.00 38.29 2.73
854 888 5.072600 TGTGGAGGTAGTACCAGATGTTTTT 59.927 40.000 21.49 0.00 41.95 1.94
859 893 7.272037 AGGTAGTACCAGATGTTTTTGTTTG 57.728 36.000 21.49 0.00 41.95 2.93
871 905 6.279513 TGTTTTTGTTTGTCTTGACCATCT 57.720 33.333 0.00 0.00 0.00 2.90
916 950 7.940137 ACACTACAATGTATTTTCTGGTTACCA 59.060 33.333 3.29 3.29 0.00 3.25
933 970 9.444600 CTGGTTACCAGTTAATTAAGCTTCTAA 57.555 33.333 22.37 0.00 45.82 2.10
952 989 6.463995 TCTAAATGTTTTGTTGCACCTCTT 57.536 33.333 0.00 0.00 0.00 2.85
955 992 6.421377 AAATGTTTTGTTGCACCTCTTTTC 57.579 33.333 0.00 0.00 0.00 2.29
956 993 4.527509 TGTTTTGTTGCACCTCTTTTCA 57.472 36.364 0.00 0.00 0.00 2.69
960 997 4.734398 TTGTTGCACCTCTTTTCACATT 57.266 36.364 0.00 0.00 0.00 2.71
961 998 4.044336 TGTTGCACCTCTTTTCACATTG 57.956 40.909 0.00 0.00 0.00 2.82
963 1000 2.309613 TGCACCTCTTTTCACATTGCT 58.690 42.857 0.00 0.00 0.00 3.91
965 1002 3.054878 GCACCTCTTTTCACATTGCTTG 58.945 45.455 0.00 0.00 0.00 4.01
966 1003 3.243501 GCACCTCTTTTCACATTGCTTGA 60.244 43.478 0.00 0.00 0.00 3.02
967 1004 4.560108 GCACCTCTTTTCACATTGCTTGAT 60.560 41.667 0.00 0.00 0.00 2.57
969 1006 5.404366 CACCTCTTTTCACATTGCTTGATTG 59.596 40.000 0.00 0.00 0.00 2.67
970 1007 5.302568 ACCTCTTTTCACATTGCTTGATTGA 59.697 36.000 0.00 0.00 0.00 2.57
971 1008 6.014840 ACCTCTTTTCACATTGCTTGATTGAT 60.015 34.615 0.00 0.00 0.00 2.57
972 1009 6.530534 CCTCTTTTCACATTGCTTGATTGATC 59.469 38.462 0.00 0.00 0.00 2.92
973 1010 7.223260 TCTTTTCACATTGCTTGATTGATCT 57.777 32.000 0.00 0.00 0.00 2.75
979 1017 8.058667 TCACATTGCTTGATTGATCTTAACAT 57.941 30.769 0.00 0.00 0.00 2.71
982 1020 9.961265 ACATTGCTTGATTGATCTTAACATATG 57.039 29.630 0.00 0.00 0.00 1.78
1093 1136 9.066892 TGCTGTAAGTAATCTGAACATTCTTTT 57.933 29.630 0.00 0.00 35.30 2.27
1178 1221 9.631639 GTTTTTGCTGTTTGATTTGTGTATTAC 57.368 29.630 0.00 0.00 0.00 1.89
1259 1302 7.099764 TCTTCACCTCTTATGATGAAGTTCAC 58.900 38.462 7.96 3.26 45.40 3.18
1298 1341 1.552792 GGTCTCCAAGAGAACCTCCTG 59.447 57.143 0.00 0.00 40.21 3.86
1301 1344 2.558575 TCTCCAAGAGAACCTCCTGAGG 60.559 54.545 11.68 11.68 42.96 3.86
1344 2037 5.358442 ACTGTGCCTGTTGTGTTTTATTGTA 59.642 36.000 0.00 0.00 0.00 2.41
1650 2706 0.539438 TGGGTGTGAAGGTTCATGCC 60.539 55.000 0.00 1.96 39.73 4.40
1722 2778 0.862490 TGCATGTCGTTGTTGGTACG 59.138 50.000 0.00 0.00 40.23 3.67
1728 2784 2.322081 CGTTGTTGGTACGCCTGGG 61.322 63.158 0.00 0.00 35.27 4.45
1749 2805 0.944386 GTGTGTTTGACATGCTCCGT 59.056 50.000 0.00 0.00 36.78 4.69
1836 2892 2.504367 CGTGGTTTCAAGGATCAGGTT 58.496 47.619 0.00 0.00 0.00 3.50
1841 2897 5.300792 GTGGTTTCAAGGATCAGGTTAACAA 59.699 40.000 8.10 0.00 0.00 2.83
1845 2903 8.027189 GGTTTCAAGGATCAGGTTAACAATTAC 58.973 37.037 8.10 0.00 0.00 1.89
1847 2905 6.469410 TCAAGGATCAGGTTAACAATTACGT 58.531 36.000 8.10 0.00 0.00 3.57
1857 3198 7.957484 CAGGTTAACAATTACGTTCTTCATCTG 59.043 37.037 8.10 0.00 0.00 2.90
1874 3215 8.843262 TCTTCATCTGTAATATTTTGCATCTGG 58.157 33.333 0.00 0.00 0.00 3.86
1875 3216 8.523915 TTCATCTGTAATATTTTGCATCTGGT 57.476 30.769 0.00 0.00 0.00 4.00
1886 3227 6.741992 TTTTGCATCTGGTATACTTCACAG 57.258 37.500 2.25 1.87 0.00 3.66
1887 3228 5.420725 TTGCATCTGGTATACTTCACAGT 57.579 39.130 2.25 0.00 36.99 3.55
1893 3234 8.338259 GCATCTGGTATACTTCACAGTTTATTG 58.662 37.037 2.25 0.00 34.06 1.90
1903 3244 6.428159 ACTTCACAGTTTATTGATCTGACACC 59.572 38.462 0.00 0.00 33.93 4.16
1923 3264 8.028354 TGACACCATCATTGCAACTAATTTAAG 58.972 33.333 0.00 0.00 29.99 1.85
1928 3269 9.590451 CCATCATTGCAACTAATTTAAGTGAAT 57.410 29.630 0.00 0.00 0.00 2.57
1931 3272 9.979578 TCATTGCAACTAATTTAAGTGAATGTT 57.020 25.926 0.00 0.00 0.00 2.71
1935 3276 9.066892 TGCAACTAATTTAAGTGAATGTTCTCT 57.933 29.630 0.00 0.00 32.86 3.10
1953 3294 8.680039 TGTTCTCTTAGTAGACTATCTAAGGC 57.320 38.462 20.18 13.58 41.68 4.35
1954 3295 8.272889 TGTTCTCTTAGTAGACTATCTAAGGCA 58.727 37.037 20.18 14.89 41.68 4.75
1956 3297 9.509956 TTCTCTTAGTAGACTATCTAAGGCATC 57.490 37.037 20.18 0.00 41.68 3.91
1957 3298 8.661345 TCTCTTAGTAGACTATCTAAGGCATCA 58.339 37.037 20.18 9.02 41.68 3.07
1958 3299 9.461312 CTCTTAGTAGACTATCTAAGGCATCAT 57.539 37.037 20.18 0.00 41.68 2.45
1959 3300 9.456147 TCTTAGTAGACTATCTAAGGCATCATC 57.544 37.037 20.18 0.00 41.68 2.92
1960 3301 9.237187 CTTAGTAGACTATCTAAGGCATCATCA 57.763 37.037 16.36 0.00 39.30 3.07
1962 3303 7.237982 AGTAGACTATCTAAGGCATCATCACT 58.762 38.462 0.00 0.00 34.57 3.41
1978 3364 8.494347 GCATCATCACTAATCACTAATCAGAAC 58.506 37.037 0.00 0.00 0.00 3.01
1979 3365 9.761504 CATCATCACTAATCACTAATCAGAACT 57.238 33.333 0.00 0.00 0.00 3.01
1987 3373 9.743057 CTAATCACTAATCAGAACTAAGTCTGG 57.257 37.037 2.57 0.00 44.40 3.86
1994 3380 4.632153 TCAGAACTAAGTCTGGCAAGTTC 58.368 43.478 17.26 17.26 44.40 3.01
2006 3392 9.740710 AAGTCTGGCAAGTTCTAAGTTATAAAT 57.259 29.630 0.00 0.00 0.00 1.40
2007 3393 9.384764 AGTCTGGCAAGTTCTAAGTTATAAATC 57.615 33.333 0.00 0.00 0.00 2.17
2028 3414 8.748380 AAATCATGTTAAGTTTAAAGAGCTGC 57.252 30.769 0.00 0.00 0.00 5.25
2029 3415 6.875948 TCATGTTAAGTTTAAAGAGCTGCA 57.124 33.333 1.02 0.00 0.00 4.41
2031 3417 8.560355 TCATGTTAAGTTTAAAGAGCTGCATA 57.440 30.769 1.02 0.00 0.00 3.14
2034 3420 8.560355 TGTTAAGTTTAAAGAGCTGCATATGA 57.440 30.769 6.97 0.00 0.00 2.15
2064 3450 9.118236 GTTTGTGTAATTTCATTGTCTAAGCTC 57.882 33.333 0.00 0.00 0.00 4.09
2065 3451 7.977789 TGTGTAATTTCATTGTCTAAGCTCA 57.022 32.000 0.00 0.00 0.00 4.26
2074 3460 6.656902 TCATTGTCTAAGCTCATCCATTCTT 58.343 36.000 0.00 0.00 0.00 2.52
2075 3461 7.795047 TCATTGTCTAAGCTCATCCATTCTTA 58.205 34.615 0.00 0.00 0.00 2.10
2092 3478 9.555727 TCCATTCTTACATTTACTTAGTATGGC 57.444 33.333 0.00 0.00 35.18 4.40
2097 3483 9.378551 TCTTACATTTACTTAGTATGGCACTTG 57.621 33.333 0.00 0.00 38.80 3.16
2110 3496 4.300189 TGGCACTTGATGTTGTTGTTAC 57.700 40.909 0.00 0.00 0.00 2.50
2159 3545 7.817418 TTTTATAAGCTGTGGGTATTGATCC 57.183 36.000 0.00 0.00 0.00 3.36
2160 3546 6.508030 TTATAAGCTGTGGGTATTGATCCA 57.492 37.500 0.00 0.00 0.00 3.41
2374 3760 2.304470 GGAGAAGGAAGAGTGGAAGCTT 59.696 50.000 0.00 0.00 0.00 3.74
2569 3955 3.069586 TCAGATCAGGTTCTTCACGTGTT 59.930 43.478 16.51 0.00 41.32 3.32
2593 3979 2.281070 ACCACTGACCTGCTTGCG 60.281 61.111 0.00 0.00 0.00 4.85
2816 4202 1.284982 CGTTGCCGACCTTCTGTGAG 61.285 60.000 0.00 0.00 35.63 3.51
2818 4204 2.811317 GCCGACCTTCTGTGAGCG 60.811 66.667 0.00 0.00 0.00 5.03
2886 4272 6.533367 GCTTTGTTTTTGTTGAAGTATCACCA 59.467 34.615 0.00 0.00 34.61 4.17
2887 4273 7.064016 GCTTTGTTTTTGTTGAAGTATCACCAA 59.936 33.333 0.00 0.00 36.33 3.67
3035 4433 4.704103 TGCTGAGGAGGGAGGCGT 62.704 66.667 0.00 0.00 0.00 5.68
3047 4445 3.392595 GAGGCGTTGCTGCTCATGC 62.393 63.158 0.00 4.66 40.20 4.06
3164 4562 4.481368 TGTAATCCTGCAATCGGTACTT 57.519 40.909 0.00 0.00 0.00 2.24
3165 4563 4.839121 TGTAATCCTGCAATCGGTACTTT 58.161 39.130 0.00 0.00 0.00 2.66
3234 4633 9.684702 ATAACCTATCCTTATTAGTCAAAGGGA 57.315 33.333 1.52 0.00 42.20 4.20
3235 4634 7.619512 ACCTATCCTTATTAGTCAAAGGGAG 57.380 40.000 1.52 0.56 42.20 4.30
3238 4637 9.327731 CCTATCCTTATTAGTCAAAGGGAGTAT 57.672 37.037 1.52 0.00 42.20 2.12
3263 4662 4.307443 TCTACTTATGACCACTCGCATG 57.693 45.455 0.00 0.00 0.00 4.06
3265 4664 3.334583 ACTTATGACCACTCGCATGTT 57.665 42.857 0.00 0.00 0.00 2.71
3266 4665 3.002791 ACTTATGACCACTCGCATGTTG 58.997 45.455 0.00 0.00 0.00 3.33
3267 4666 1.368641 TATGACCACTCGCATGTTGC 58.631 50.000 0.00 0.00 40.69 4.17
3270 4680 1.066215 TGACCACTCGCATGTTGCTAT 60.066 47.619 0.00 0.00 42.25 2.97
3272 4682 2.420022 GACCACTCGCATGTTGCTATTT 59.580 45.455 0.00 0.00 42.25 1.40
3277 4687 2.164219 CTCGCATGTTGCTATTTGGGTT 59.836 45.455 0.00 0.00 42.25 4.11
3285 4695 4.837860 TGTTGCTATTTGGGTTTCAGGATT 59.162 37.500 0.00 0.00 0.00 3.01
3286 4696 6.013379 TGTTGCTATTTGGGTTTCAGGATTA 58.987 36.000 0.00 0.00 0.00 1.75
3287 4697 6.667414 TGTTGCTATTTGGGTTTCAGGATTAT 59.333 34.615 0.00 0.00 0.00 1.28
3288 4698 7.836685 TGTTGCTATTTGGGTTTCAGGATTATA 59.163 33.333 0.00 0.00 0.00 0.98
3391 4812 2.899256 GGATTCTCATCCTCCCAGAGAG 59.101 54.545 0.00 0.00 45.41 3.20
3392 4813 3.437784 GGATTCTCATCCTCCCAGAGAGA 60.438 52.174 0.00 0.00 46.50 3.10
3394 4815 2.213310 TCTCATCCTCCCAGAGAGAGT 58.787 52.381 0.00 0.00 46.50 3.24
3395 4816 3.398490 TCTCATCCTCCCAGAGAGAGTA 58.602 50.000 0.00 0.00 46.50 2.59
3398 4819 5.103301 TCTCATCCTCCCAGAGAGAGTAAAT 60.103 44.000 0.00 0.00 46.50 1.40
3399 4820 6.103353 TCTCATCCTCCCAGAGAGAGTAAATA 59.897 42.308 0.00 0.00 46.50 1.40
3400 4821 6.310941 TCATCCTCCCAGAGAGAGTAAATAG 58.689 44.000 0.00 0.00 46.50 1.73
3401 4822 5.996271 TCCTCCCAGAGAGAGTAAATAGA 57.004 43.478 0.00 0.00 46.50 1.98
3402 4823 5.947663 TCCTCCCAGAGAGAGTAAATAGAG 58.052 45.833 0.00 0.00 46.50 2.43
3404 4825 6.334237 TCCTCCCAGAGAGAGTAAATAGAGAT 59.666 42.308 0.00 0.00 46.50 2.75
3405 4826 6.434028 CCTCCCAGAGAGAGTAAATAGAGATG 59.566 46.154 0.00 0.00 46.50 2.90
3406 4827 6.310941 TCCCAGAGAGAGTAAATAGAGATGG 58.689 44.000 0.00 0.00 0.00 3.51
3407 4828 6.074648 CCCAGAGAGAGTAAATAGAGATGGT 58.925 44.000 0.00 0.00 0.00 3.55
3408 4829 6.015519 CCCAGAGAGAGTAAATAGAGATGGTG 60.016 46.154 0.00 0.00 0.00 4.17
3409 4830 6.775142 CCAGAGAGAGTAAATAGAGATGGTGA 59.225 42.308 0.00 0.00 0.00 4.02
3415 4840 9.255304 GAGAGTAAATAGAGATGGTGAAATGTC 57.745 37.037 0.00 0.00 0.00 3.06
3420 4845 6.760440 ATAGAGATGGTGAAATGTCATCCT 57.240 37.500 0.00 0.00 38.33 3.24
3447 4872 1.327303 AGGACGGAGCTCATCAGATC 58.673 55.000 17.19 3.03 33.95 2.75
3448 4873 1.133513 AGGACGGAGCTCATCAGATCT 60.134 52.381 17.19 2.36 35.21 2.75
3449 4874 1.686052 GGACGGAGCTCATCAGATCTT 59.314 52.381 17.19 0.00 35.21 2.40
3450 4875 2.102252 GGACGGAGCTCATCAGATCTTT 59.898 50.000 17.19 0.00 35.21 2.52
3451 4876 3.431486 GGACGGAGCTCATCAGATCTTTT 60.431 47.826 17.19 0.00 35.21 2.27
3452 4877 3.791245 ACGGAGCTCATCAGATCTTTTC 58.209 45.455 17.19 0.00 35.21 2.29
3453 4878 3.129871 CGGAGCTCATCAGATCTTTTCC 58.870 50.000 17.19 0.00 35.21 3.13
3454 4879 3.475575 GGAGCTCATCAGATCTTTTCCC 58.524 50.000 17.19 0.00 35.21 3.97
3455 4880 3.475575 GAGCTCATCAGATCTTTTCCCC 58.524 50.000 9.40 0.00 31.80 4.81
3456 4881 2.174424 AGCTCATCAGATCTTTTCCCCC 59.826 50.000 0.00 0.00 0.00 5.40
3457 4882 2.174424 GCTCATCAGATCTTTTCCCCCT 59.826 50.000 0.00 0.00 0.00 4.79
3458 4883 3.372458 GCTCATCAGATCTTTTCCCCCTT 60.372 47.826 0.00 0.00 0.00 3.95
3459 4884 4.864726 CTCATCAGATCTTTTCCCCCTTT 58.135 43.478 0.00 0.00 0.00 3.11
3460 4885 4.860022 TCATCAGATCTTTTCCCCCTTTC 58.140 43.478 0.00 0.00 0.00 2.62
3461 4886 4.292041 TCATCAGATCTTTTCCCCCTTTCA 59.708 41.667 0.00 0.00 0.00 2.69
3462 4887 4.034285 TCAGATCTTTTCCCCCTTTCAC 57.966 45.455 0.00 0.00 0.00 3.18
3463 4888 3.397618 TCAGATCTTTTCCCCCTTTCACA 59.602 43.478 0.00 0.00 0.00 3.58
3464 4889 3.507622 CAGATCTTTTCCCCCTTTCACAC 59.492 47.826 0.00 0.00 0.00 3.82
3465 4890 2.375014 TCTTTTCCCCCTTTCACACC 57.625 50.000 0.00 0.00 0.00 4.16
3466 4891 1.571457 TCTTTTCCCCCTTTCACACCA 59.429 47.619 0.00 0.00 0.00 4.17
3467 4892 2.178984 TCTTTTCCCCCTTTCACACCAT 59.821 45.455 0.00 0.00 0.00 3.55
3468 4893 2.785357 TTTCCCCCTTTCACACCATT 57.215 45.000 0.00 0.00 0.00 3.16
3469 4894 2.785357 TTCCCCCTTTCACACCATTT 57.215 45.000 0.00 0.00 0.00 2.32
3470 4895 2.785357 TCCCCCTTTCACACCATTTT 57.215 45.000 0.00 0.00 0.00 1.82
3471 4896 2.324541 TCCCCCTTTCACACCATTTTG 58.675 47.619 0.00 0.00 0.00 2.44
3472 4897 2.046292 CCCCCTTTCACACCATTTTGT 58.954 47.619 0.00 0.00 0.00 2.83
3473 4898 2.437651 CCCCCTTTCACACCATTTTGTT 59.562 45.455 0.00 0.00 0.00 2.83
3474 4899 3.643792 CCCCCTTTCACACCATTTTGTTA 59.356 43.478 0.00 0.00 0.00 2.41
3475 4900 4.262420 CCCCCTTTCACACCATTTTGTTAG 60.262 45.833 0.00 0.00 0.00 2.34
3476 4901 4.306600 CCCTTTCACACCATTTTGTTAGC 58.693 43.478 0.00 0.00 0.00 3.09
3477 4902 3.980775 CCTTTCACACCATTTTGTTAGCG 59.019 43.478 0.00 0.00 0.00 4.26
3478 4903 4.499019 CCTTTCACACCATTTTGTTAGCGT 60.499 41.667 0.00 0.00 0.00 5.07
3479 4904 4.640789 TTCACACCATTTTGTTAGCGTT 57.359 36.364 0.00 0.00 0.00 4.84
3480 4905 3.958704 TCACACCATTTTGTTAGCGTTG 58.041 40.909 0.00 0.00 0.00 4.10
3481 4906 3.378742 TCACACCATTTTGTTAGCGTTGT 59.621 39.130 0.00 0.00 0.00 3.32
3482 4907 3.485378 CACACCATTTTGTTAGCGTTGTG 59.515 43.478 0.00 0.00 0.00 3.33
3483 4908 2.470999 CACCATTTTGTTAGCGTTGTGC 59.529 45.455 0.00 0.00 46.98 4.57
3493 4918 2.605094 GCGTTGTGCTTGAGTGAGA 58.395 52.632 0.00 0.00 41.73 3.27
3494 4919 0.510359 GCGTTGTGCTTGAGTGAGAG 59.490 55.000 0.00 0.00 41.73 3.20
3495 4920 1.143305 CGTTGTGCTTGAGTGAGAGG 58.857 55.000 0.00 0.00 0.00 3.69
3496 4921 0.871057 GTTGTGCTTGAGTGAGAGGC 59.129 55.000 0.00 0.00 0.00 4.70
3497 4922 0.761187 TTGTGCTTGAGTGAGAGGCT 59.239 50.000 0.00 0.00 0.00 4.58
3498 4923 1.632589 TGTGCTTGAGTGAGAGGCTA 58.367 50.000 0.00 0.00 0.00 3.93
3499 4924 1.273606 TGTGCTTGAGTGAGAGGCTAC 59.726 52.381 0.00 0.00 0.00 3.58
3500 4925 1.548269 GTGCTTGAGTGAGAGGCTACT 59.452 52.381 0.00 0.00 0.00 2.57
3501 4926 1.547820 TGCTTGAGTGAGAGGCTACTG 59.452 52.381 0.00 0.00 0.00 2.74
3502 4927 1.821753 GCTTGAGTGAGAGGCTACTGA 59.178 52.381 0.00 0.00 0.00 3.41
3503 4928 2.430332 GCTTGAGTGAGAGGCTACTGAT 59.570 50.000 0.00 0.00 0.00 2.90
3504 4929 3.634448 GCTTGAGTGAGAGGCTACTGATA 59.366 47.826 0.00 0.00 0.00 2.15
3505 4930 4.261572 GCTTGAGTGAGAGGCTACTGATAG 60.262 50.000 0.00 0.00 0.00 2.08
3513 4938 2.515376 GCTACTGATAGCGCTGCTG 58.485 57.895 22.90 17.57 44.36 4.41
3514 4939 0.031314 GCTACTGATAGCGCTGCTGA 59.969 55.000 22.90 0.00 44.36 4.26
3515 4940 1.764851 CTACTGATAGCGCTGCTGAC 58.235 55.000 22.90 7.16 40.10 3.51
3516 4941 0.385751 TACTGATAGCGCTGCTGACC 59.614 55.000 22.90 2.91 40.10 4.02
3517 4942 1.593750 CTGATAGCGCTGCTGACCC 60.594 63.158 22.90 1.42 40.10 4.46
3518 4943 2.025767 CTGATAGCGCTGCTGACCCT 62.026 60.000 22.90 0.00 40.10 4.34
3519 4944 1.144936 GATAGCGCTGCTGACCCTT 59.855 57.895 22.90 0.00 40.10 3.95
3520 4945 0.878086 GATAGCGCTGCTGACCCTTC 60.878 60.000 22.90 0.00 40.10 3.46
3521 4946 2.317149 ATAGCGCTGCTGACCCTTCC 62.317 60.000 22.90 0.00 40.10 3.46
3523 4948 4.020617 CGCTGCTGACCCTTCCCA 62.021 66.667 0.00 0.00 0.00 4.37
3524 4949 2.436109 GCTGCTGACCCTTCCCAA 59.564 61.111 0.00 0.00 0.00 4.12
3525 4950 1.228552 GCTGCTGACCCTTCCCAAA 60.229 57.895 0.00 0.00 0.00 3.28
3526 4951 1.527433 GCTGCTGACCCTTCCCAAAC 61.527 60.000 0.00 0.00 0.00 2.93
3527 4952 0.895559 CTGCTGACCCTTCCCAAACC 60.896 60.000 0.00 0.00 0.00 3.27
3528 4953 1.360393 TGCTGACCCTTCCCAAACCT 61.360 55.000 0.00 0.00 0.00 3.50
3529 4954 0.178961 GCTGACCCTTCCCAAACCTT 60.179 55.000 0.00 0.00 0.00 3.50
3530 4955 1.620822 CTGACCCTTCCCAAACCTTG 58.379 55.000 0.00 0.00 0.00 3.61
3539 4964 2.644992 CAAACCTTGGACGCCTGC 59.355 61.111 0.00 0.00 0.00 4.85
3540 4965 1.898574 CAAACCTTGGACGCCTGCT 60.899 57.895 0.00 0.00 0.00 4.24
3541 4966 1.898574 AAACCTTGGACGCCTGCTG 60.899 57.895 0.00 0.00 0.00 4.41
3542 4967 2.337879 AAACCTTGGACGCCTGCTGA 62.338 55.000 0.00 0.00 0.00 4.26
3543 4968 2.032528 CCTTGGACGCCTGCTGAA 59.967 61.111 0.00 0.00 0.00 3.02
3544 4969 2.328099 CCTTGGACGCCTGCTGAAC 61.328 63.158 0.00 0.00 0.00 3.18
3545 4970 2.281484 TTGGACGCCTGCTGAACC 60.281 61.111 0.00 0.00 0.00 3.62
3546 4971 2.738213 CTTGGACGCCTGCTGAACCT 62.738 60.000 0.00 0.00 0.00 3.50
3547 4972 2.435059 GGACGCCTGCTGAACCTC 60.435 66.667 0.00 0.00 0.00 3.85
3548 4973 2.811317 GACGCCTGCTGAACCTCG 60.811 66.667 0.00 0.00 0.00 4.63
3549 4974 3.575351 GACGCCTGCTGAACCTCGT 62.575 63.158 0.00 0.00 0.00 4.18
3550 4975 2.811317 CGCCTGCTGAACCTCGTC 60.811 66.667 0.00 0.00 0.00 4.20
3551 4976 2.659610 GCCTGCTGAACCTCGTCT 59.340 61.111 0.00 0.00 0.00 4.18
3552 4977 1.739562 GCCTGCTGAACCTCGTCTG 60.740 63.158 0.00 0.00 0.00 3.51
3553 4978 1.079543 CCTGCTGAACCTCGTCTGG 60.080 63.158 0.00 0.00 0.00 3.86
3554 4979 1.668294 CTGCTGAACCTCGTCTGGT 59.332 57.895 0.00 0.00 43.11 4.00
3560 4985 2.031163 ACCTCGTCTGGTTGCAGC 59.969 61.111 0.00 0.00 36.89 5.25
3561 4986 2.345244 CCTCGTCTGGTTGCAGCT 59.655 61.111 0.00 0.00 0.00 4.24
3562 4987 2.031516 CCTCGTCTGGTTGCAGCTG 61.032 63.158 10.11 10.11 0.00 4.24
3563 4988 2.031012 TCGTCTGGTTGCAGCTGG 59.969 61.111 17.12 0.00 0.00 4.85
3564 4989 3.052082 CGTCTGGTTGCAGCTGGG 61.052 66.667 17.12 0.00 0.00 4.45
3565 4990 2.113986 GTCTGGTTGCAGCTGGGT 59.886 61.111 17.12 0.00 0.00 4.51
3566 4991 2.113774 TCTGGTTGCAGCTGGGTG 59.886 61.111 17.12 0.00 0.00 4.61
3567 4992 2.203394 CTGGTTGCAGCTGGGTGT 60.203 61.111 17.12 0.00 0.00 4.16
3568 4993 1.829533 CTGGTTGCAGCTGGGTGTT 60.830 57.895 17.12 0.00 0.00 3.32
3569 4994 2.079020 CTGGTTGCAGCTGGGTGTTG 62.079 60.000 17.12 0.00 0.00 3.33
3570 4995 2.127232 GGTTGCAGCTGGGTGTTGT 61.127 57.895 17.12 0.00 0.00 3.32
3571 4996 1.066257 GTTGCAGCTGGGTGTTGTG 59.934 57.895 17.12 0.00 0.00 3.33
3572 4997 2.784356 TTGCAGCTGGGTGTTGTGC 61.784 57.895 17.12 0.00 34.62 4.57
3573 4998 3.982241 GCAGCTGGGTGTTGTGCC 61.982 66.667 17.12 0.00 0.00 5.01
3574 4999 3.663176 CAGCTGGGTGTTGTGCCG 61.663 66.667 5.57 0.00 0.00 5.69
3575 5000 3.872603 AGCTGGGTGTTGTGCCGA 61.873 61.111 0.00 0.00 0.00 5.54
3576 5001 2.672996 GCTGGGTGTTGTGCCGAT 60.673 61.111 0.00 0.00 0.00 4.18
3577 5002 2.268076 GCTGGGTGTTGTGCCGATT 61.268 57.895 0.00 0.00 0.00 3.34
3578 5003 1.875963 CTGGGTGTTGTGCCGATTC 59.124 57.895 0.00 0.00 0.00 2.52
3579 5004 1.586154 CTGGGTGTTGTGCCGATTCC 61.586 60.000 0.00 0.00 0.00 3.01
3580 5005 1.602323 GGGTGTTGTGCCGATTCCA 60.602 57.895 0.00 0.00 0.00 3.53
3581 5006 1.586154 GGGTGTTGTGCCGATTCCAG 61.586 60.000 0.00 0.00 0.00 3.86
3582 5007 1.210155 GTGTTGTGCCGATTCCAGC 59.790 57.895 0.00 0.00 0.00 4.85
3583 5008 1.073025 TGTTGTGCCGATTCCAGCT 59.927 52.632 0.00 0.00 0.00 4.24
3584 5009 0.537143 TGTTGTGCCGATTCCAGCTT 60.537 50.000 0.00 0.00 0.00 3.74
3585 5010 0.109597 GTTGTGCCGATTCCAGCTTG 60.110 55.000 0.00 0.00 0.00 4.01
3586 5011 1.243342 TTGTGCCGATTCCAGCTTGG 61.243 55.000 0.00 0.00 39.43 3.61
3587 5012 2.751436 TGCCGATTCCAGCTTGGC 60.751 61.111 0.00 0.00 42.62 4.52
3588 5013 3.521796 GCCGATTCCAGCTTGGCC 61.522 66.667 0.00 0.00 37.47 5.36
3589 5014 2.273449 CCGATTCCAGCTTGGCCT 59.727 61.111 3.32 0.00 37.47 5.19
3590 5015 2.117156 CCGATTCCAGCTTGGCCTG 61.117 63.158 3.32 0.00 37.47 4.85
3591 5016 1.377725 CGATTCCAGCTTGGCCTGT 60.378 57.895 3.32 0.00 37.47 4.00
3592 5017 1.651240 CGATTCCAGCTTGGCCTGTG 61.651 60.000 3.32 0.00 37.47 3.66
3593 5018 1.941999 GATTCCAGCTTGGCCTGTGC 61.942 60.000 3.32 5.63 37.47 4.57
3594 5019 2.436596 ATTCCAGCTTGGCCTGTGCT 62.437 55.000 3.32 8.17 37.47 4.40
3597 5022 3.894638 AGCTTGGCCTGTGCTGGT 61.895 61.111 14.95 0.00 35.54 4.00
3598 5023 2.914097 GCTTGGCCTGTGCTGGTT 60.914 61.111 3.32 0.00 37.74 3.67
3599 5024 3.045142 CTTGGCCTGTGCTGGTTG 58.955 61.111 3.32 0.00 37.74 3.77
3600 5025 3.216944 CTTGGCCTGTGCTGGTTGC 62.217 63.158 3.32 0.00 43.25 4.17
3609 5034 2.789917 GCTGGTTGCAGCATCTCG 59.210 61.111 2.05 0.00 46.73 4.04
3610 5035 2.758089 GCTGGTTGCAGCATCTCGG 61.758 63.158 2.05 0.00 46.73 4.63
3611 5036 2.747460 TGGTTGCAGCATCTCGGC 60.747 61.111 2.05 0.00 36.38 5.54
3612 5037 3.512516 GGTTGCAGCATCTCGGCC 61.513 66.667 2.05 0.00 34.87 6.13
3613 5038 2.437359 GTTGCAGCATCTCGGCCT 60.437 61.111 0.00 0.00 34.87 5.19
3614 5039 2.437180 TTGCAGCATCTCGGCCTG 60.437 61.111 0.00 0.00 34.87 4.85
3615 5040 3.258228 TTGCAGCATCTCGGCCTGT 62.258 57.895 0.00 0.00 34.87 4.00
3616 5041 2.894387 GCAGCATCTCGGCCTGTC 60.894 66.667 0.00 0.00 0.00 3.51
3617 5042 2.202987 CAGCATCTCGGCCTGTCC 60.203 66.667 0.00 0.00 0.00 4.02
3618 5043 3.474570 AGCATCTCGGCCTGTCCC 61.475 66.667 0.00 0.00 0.00 4.46
3619 5044 3.474570 GCATCTCGGCCTGTCCCT 61.475 66.667 0.00 0.00 0.00 4.20
3620 5045 2.503061 CATCTCGGCCTGTCCCTG 59.497 66.667 0.00 0.00 0.00 4.45
3621 5046 3.474570 ATCTCGGCCTGTCCCTGC 61.475 66.667 0.00 0.00 0.00 4.85
3623 5048 4.020617 CTCGGCCTGTCCCTGCAA 62.021 66.667 0.00 0.00 0.00 4.08
3624 5049 4.329545 TCGGCCTGTCCCTGCAAC 62.330 66.667 0.00 0.00 0.00 4.17
3627 5052 3.971702 GCCTGTCCCTGCAACCCT 61.972 66.667 0.00 0.00 0.00 4.34
3628 5053 2.352805 CCTGTCCCTGCAACCCTC 59.647 66.667 0.00 0.00 0.00 4.30
3629 5054 2.227036 CCTGTCCCTGCAACCCTCT 61.227 63.158 0.00 0.00 0.00 3.69
3630 5055 1.002868 CTGTCCCTGCAACCCTCTG 60.003 63.158 0.00 0.00 0.00 3.35
3631 5056 2.360475 GTCCCTGCAACCCTCTGC 60.360 66.667 0.00 0.00 42.95 4.26
3632 5057 2.530151 TCCCTGCAACCCTCTGCT 60.530 61.111 0.00 0.00 43.07 4.24
3633 5058 2.156098 TCCCTGCAACCCTCTGCTT 61.156 57.895 0.00 0.00 43.07 3.91
3634 5059 1.975407 CCCTGCAACCCTCTGCTTG 60.975 63.158 0.00 0.00 43.07 4.01
3635 5060 2.633509 CCTGCAACCCTCTGCTTGC 61.634 63.158 0.00 0.00 43.07 4.01
3636 5061 1.602888 CTGCAACCCTCTGCTTGCT 60.603 57.895 7.50 0.00 42.77 3.91
3637 5062 1.863662 CTGCAACCCTCTGCTTGCTG 61.864 60.000 7.50 3.68 42.77 4.41
3638 5063 2.960170 CAACCCTCTGCTTGCTGC 59.040 61.111 0.00 0.00 43.25 5.25
3639 5064 2.282745 AACCCTCTGCTTGCTGCC 60.283 61.111 0.00 0.00 42.00 4.85
3640 5065 3.875510 AACCCTCTGCTTGCTGCCC 62.876 63.158 0.00 0.00 42.00 5.36
3642 5067 4.044439 CCTCTGCTTGCTGCCCCT 62.044 66.667 0.00 0.00 42.00 4.79
3643 5068 2.035312 CTCTGCTTGCTGCCCCTT 59.965 61.111 0.00 0.00 42.00 3.95
3644 5069 2.282674 TCTGCTTGCTGCCCCTTG 60.283 61.111 0.00 0.00 42.00 3.61
3645 5070 4.065281 CTGCTTGCTGCCCCTTGC 62.065 66.667 0.00 0.00 42.00 4.01
3654 5079 2.747855 GCCCCTTGCAGAACCTCG 60.748 66.667 0.00 0.00 40.77 4.63
3655 5080 2.750350 CCCCTTGCAGAACCTCGT 59.250 61.111 0.00 0.00 0.00 4.18
3656 5081 1.376037 CCCCTTGCAGAACCTCGTC 60.376 63.158 0.00 0.00 0.00 4.20
3657 5082 1.738099 CCCTTGCAGAACCTCGTCG 60.738 63.158 0.00 0.00 0.00 5.12
3658 5083 1.006102 CCTTGCAGAACCTCGTCGT 60.006 57.895 0.00 0.00 0.00 4.34
3659 5084 1.284982 CCTTGCAGAACCTCGTCGTG 61.285 60.000 0.00 0.00 0.00 4.35
3660 5085 0.597637 CTTGCAGAACCTCGTCGTGT 60.598 55.000 0.00 0.00 0.00 4.49
3661 5086 0.874175 TTGCAGAACCTCGTCGTGTG 60.874 55.000 0.00 0.00 0.00 3.82
3662 5087 2.658707 GCAGAACCTCGTCGTGTGC 61.659 63.158 0.00 0.00 0.00 4.57
3663 5088 1.299850 CAGAACCTCGTCGTGTGCA 60.300 57.895 0.00 0.00 0.00 4.57
3664 5089 1.007271 AGAACCTCGTCGTGTGCAG 60.007 57.895 0.00 0.00 0.00 4.41
3665 5090 2.658707 GAACCTCGTCGTGTGCAGC 61.659 63.158 0.00 0.00 0.00 5.25
3666 5091 3.151958 AACCTCGTCGTGTGCAGCT 62.152 57.895 0.00 0.00 0.00 4.24
3667 5092 3.108289 CCTCGTCGTGTGCAGCTG 61.108 66.667 10.11 10.11 0.00 4.24
3668 5093 3.108289 CTCGTCGTGTGCAGCTGG 61.108 66.667 17.12 0.00 0.00 4.85
3669 5094 3.558099 CTCGTCGTGTGCAGCTGGA 62.558 63.158 17.12 10.66 0.00 3.86
3670 5095 3.406361 CGTCGTGTGCAGCTGGAC 61.406 66.667 29.44 29.44 36.87 4.02
3671 5096 3.406361 GTCGTGTGCAGCTGGACG 61.406 66.667 29.82 20.74 39.39 4.79
3672 5097 3.911698 TCGTGTGCAGCTGGACGT 61.912 61.111 29.82 0.00 39.39 4.34
3673 5098 2.967076 CGTGTGCAGCTGGACGTT 60.967 61.111 29.82 0.00 39.39 3.99
3674 5099 2.633657 GTGTGCAGCTGGACGTTG 59.366 61.111 29.82 0.00 39.39 4.10
3675 5100 2.180204 GTGTGCAGCTGGACGTTGT 61.180 57.895 29.82 0.00 39.39 3.32
3676 5101 2.179547 TGTGCAGCTGGACGTTGTG 61.180 57.895 29.82 0.00 39.39 3.33
3677 5102 3.279116 TGCAGCTGGACGTTGTGC 61.279 61.111 17.12 0.00 34.62 4.57
3678 5103 2.974698 GCAGCTGGACGTTGTGCT 60.975 61.111 17.12 0.00 36.04 4.40
3679 5104 2.941333 CAGCTGGACGTTGTGCTG 59.059 61.111 18.17 18.17 45.15 4.41
3680 5105 2.821685 AGCTGGACGTTGTGCTGA 59.178 55.556 8.85 0.00 34.19 4.26
3681 5106 1.372683 AGCTGGACGTTGTGCTGAT 59.627 52.632 8.85 0.00 34.19 2.90
3682 5107 0.952497 AGCTGGACGTTGTGCTGATG 60.952 55.000 8.85 0.00 34.19 3.07
3683 5108 1.499056 CTGGACGTTGTGCTGATGC 59.501 57.895 0.00 0.00 40.20 3.91
3684 5109 0.952497 CTGGACGTTGTGCTGATGCT 60.952 55.000 0.00 0.00 40.48 3.79
3685 5110 0.534877 TGGACGTTGTGCTGATGCTT 60.535 50.000 0.00 0.00 40.48 3.91
3686 5111 1.270571 TGGACGTTGTGCTGATGCTTA 60.271 47.619 0.00 0.00 40.48 3.09
3687 5112 1.804151 GGACGTTGTGCTGATGCTTAA 59.196 47.619 0.00 0.00 40.48 1.85
3688 5113 2.412847 GGACGTTGTGCTGATGCTTAAC 60.413 50.000 0.00 0.00 40.48 2.01
3689 5114 1.535462 ACGTTGTGCTGATGCTTAACC 59.465 47.619 0.00 0.00 40.48 2.85
3690 5115 1.806542 CGTTGTGCTGATGCTTAACCT 59.193 47.619 0.00 0.00 40.48 3.50
3691 5116 2.413239 CGTTGTGCTGATGCTTAACCTG 60.413 50.000 0.00 0.00 40.48 4.00
3692 5117 2.554032 GTTGTGCTGATGCTTAACCTGT 59.446 45.455 0.00 0.00 40.48 4.00
3693 5118 2.153645 TGTGCTGATGCTTAACCTGTG 58.846 47.619 0.00 0.00 40.48 3.66
3694 5119 1.135575 GTGCTGATGCTTAACCTGTGC 60.136 52.381 0.00 0.00 40.48 4.57
3695 5120 1.167851 GCTGATGCTTAACCTGTGCA 58.832 50.000 0.00 0.00 41.13 4.57
3696 5121 1.131883 GCTGATGCTTAACCTGTGCAG 59.868 52.381 0.00 0.00 40.18 4.41
3697 5122 1.131883 CTGATGCTTAACCTGTGCAGC 59.868 52.381 0.00 0.00 42.54 5.25
3698 5123 1.271543 TGATGCTTAACCTGTGCAGCT 60.272 47.619 0.00 0.00 42.65 4.24
3699 5124 1.815003 GATGCTTAACCTGTGCAGCTT 59.185 47.619 0.00 0.00 39.61 3.74
3700 5125 0.953727 TGCTTAACCTGTGCAGCTTG 59.046 50.000 0.00 0.00 33.15 4.01
3701 5126 0.387750 GCTTAACCTGTGCAGCTTGC 60.388 55.000 0.00 1.70 45.29 4.01
3725 5150 3.991999 GCTGGTTGCAGCATCTCA 58.008 55.556 2.05 0.00 46.73 3.27
3726 5151 1.801332 GCTGGTTGCAGCATCTCAG 59.199 57.895 2.05 12.99 46.73 3.35
3727 5152 1.801332 CTGGTTGCAGCATCTCAGC 59.199 57.895 2.05 0.00 0.00 4.26
3729 5154 0.251033 TGGTTGCAGCATCTCAGCTT 60.251 50.000 2.05 0.00 43.70 3.74
3730 5155 0.170561 GGTTGCAGCATCTCAGCTTG 59.829 55.000 2.05 0.00 43.70 4.01
3731 5156 0.879765 GTTGCAGCATCTCAGCTTGT 59.120 50.000 0.00 0.00 43.70 3.16
3732 5157 1.135746 GTTGCAGCATCTCAGCTTGTC 60.136 52.381 0.00 0.00 43.70 3.18
3733 5158 1.017701 TGCAGCATCTCAGCTTGTCG 61.018 55.000 0.00 0.00 43.70 4.35
3734 5159 1.714414 CAGCATCTCAGCTTGTCGC 59.286 57.895 0.00 0.00 43.70 5.19
3743 5168 2.126965 GCTTGTCGCTTGCAGCTG 60.127 61.111 10.11 10.11 39.60 4.24
3744 5169 2.559840 CTTGTCGCTTGCAGCTGG 59.440 61.111 17.12 0.00 39.60 4.85
3745 5170 2.203195 TTGTCGCTTGCAGCTGGT 60.203 55.556 17.12 0.00 39.60 4.00
3746 5171 1.789078 CTTGTCGCTTGCAGCTGGTT 61.789 55.000 17.12 0.00 39.60 3.67
3747 5172 0.533978 TTGTCGCTTGCAGCTGGTTA 60.534 50.000 17.12 0.00 39.60 2.85
3748 5173 1.227999 TGTCGCTTGCAGCTGGTTAC 61.228 55.000 17.12 0.00 39.60 2.50
3749 5174 1.070615 TCGCTTGCAGCTGGTTACA 59.929 52.632 17.12 1.14 39.60 2.41
3750 5175 0.533978 TCGCTTGCAGCTGGTTACAA 60.534 50.000 17.12 9.95 39.60 2.41
3751 5176 0.385974 CGCTTGCAGCTGGTTACAAC 60.386 55.000 17.12 5.35 39.60 3.32
3752 5177 0.667993 GCTTGCAGCTGGTTACAACA 59.332 50.000 17.12 0.00 38.45 3.33
3753 5178 1.270550 GCTTGCAGCTGGTTACAACAT 59.729 47.619 17.12 0.00 38.45 2.71
3754 5179 2.669391 GCTTGCAGCTGGTTACAACATC 60.669 50.000 17.12 0.00 38.45 3.06
3755 5180 1.533625 TGCAGCTGGTTACAACATCC 58.466 50.000 17.12 0.00 0.00 3.51
3756 5181 0.811281 GCAGCTGGTTACAACATCCC 59.189 55.000 17.12 0.00 0.00 3.85
3757 5182 1.463674 CAGCTGGTTACAACATCCCC 58.536 55.000 5.57 0.00 0.00 4.81
3758 5183 0.331616 AGCTGGTTACAACATCCCCC 59.668 55.000 0.00 0.00 0.00 5.40
3759 5184 0.039035 GCTGGTTACAACATCCCCCA 59.961 55.000 0.00 0.00 0.00 4.96
3760 5185 1.341976 GCTGGTTACAACATCCCCCAT 60.342 52.381 0.00 0.00 0.00 4.00
3761 5186 2.378038 CTGGTTACAACATCCCCCATG 58.622 52.381 0.00 0.00 38.64 3.66
3762 5187 1.996291 TGGTTACAACATCCCCCATGA 59.004 47.619 0.00 0.00 36.21 3.07
3763 5188 2.291282 TGGTTACAACATCCCCCATGAC 60.291 50.000 0.00 0.00 36.21 3.06
3764 5189 2.014128 GTTACAACATCCCCCATGACG 58.986 52.381 0.00 0.00 36.21 4.35
3765 5190 1.281419 TACAACATCCCCCATGACGT 58.719 50.000 0.00 0.00 36.21 4.34
3766 5191 1.281419 ACAACATCCCCCATGACGTA 58.719 50.000 0.00 0.00 36.21 3.57
3767 5192 1.209504 ACAACATCCCCCATGACGTAG 59.790 52.381 0.00 0.00 36.21 3.51
3768 5193 0.180406 AACATCCCCCATGACGTAGC 59.820 55.000 0.00 0.00 36.21 3.58
3769 5194 0.980754 ACATCCCCCATGACGTAGCA 60.981 55.000 0.00 0.00 36.21 3.49
3770 5195 0.250038 CATCCCCCATGACGTAGCAG 60.250 60.000 0.00 0.00 33.80 4.24
3771 5196 0.691078 ATCCCCCATGACGTAGCAGT 60.691 55.000 0.00 0.00 0.00 4.40
3772 5197 1.153369 CCCCCATGACGTAGCAGTG 60.153 63.158 0.00 0.00 0.00 3.66
3773 5198 1.153369 CCCCATGACGTAGCAGTGG 60.153 63.158 0.00 0.00 0.00 4.00
3774 5199 1.815421 CCCATGACGTAGCAGTGGC 60.815 63.158 0.00 0.00 41.61 5.01
3785 5210 2.670934 CAGTGGCTCAGGCGCTTT 60.671 61.111 12.49 0.00 46.51 3.51
3786 5211 2.670934 AGTGGCTCAGGCGCTTTG 60.671 61.111 8.85 6.75 46.51 2.77
3787 5212 4.410743 GTGGCTCAGGCGCTTTGC 62.411 66.667 7.64 6.53 45.38 3.68
3799 5224 3.000082 GCGCTTTGCAGTAAAACTTCT 58.000 42.857 0.00 0.00 45.45 2.85
3800 5225 2.973879 GCGCTTTGCAGTAAAACTTCTC 59.026 45.455 0.00 0.00 45.45 2.87
3801 5226 3.218398 CGCTTTGCAGTAAAACTTCTCG 58.782 45.455 0.00 0.00 0.00 4.04
3802 5227 2.973879 GCTTTGCAGTAAAACTTCTCGC 59.026 45.455 0.00 0.00 0.00 5.03
3803 5228 3.548014 GCTTTGCAGTAAAACTTCTCGCA 60.548 43.478 0.00 0.00 0.00 5.10
3804 5229 3.878086 TTGCAGTAAAACTTCTCGCAG 57.122 42.857 0.00 0.00 0.00 5.18
3805 5230 2.143122 TGCAGTAAAACTTCTCGCAGG 58.857 47.619 0.00 0.00 0.00 4.85
3806 5231 1.464997 GCAGTAAAACTTCTCGCAGGG 59.535 52.381 0.00 0.00 0.00 4.45
3807 5232 2.870435 GCAGTAAAACTTCTCGCAGGGA 60.870 50.000 0.00 0.00 0.00 4.20
3808 5233 3.399330 CAGTAAAACTTCTCGCAGGGAA 58.601 45.455 0.00 0.00 0.00 3.97
3809 5234 3.813166 CAGTAAAACTTCTCGCAGGGAAA 59.187 43.478 0.00 0.00 0.00 3.13
3810 5235 4.274950 CAGTAAAACTTCTCGCAGGGAAAA 59.725 41.667 0.00 0.00 0.00 2.29
3811 5236 4.885325 AGTAAAACTTCTCGCAGGGAAAAA 59.115 37.500 0.00 0.00 0.00 1.94
3812 5237 3.710326 AAACTTCTCGCAGGGAAAAAC 57.290 42.857 0.00 0.00 0.00 2.43
3813 5238 1.605753 ACTTCTCGCAGGGAAAAACC 58.394 50.000 0.00 0.00 38.08 3.27
3814 5239 0.517316 CTTCTCGCAGGGAAAAACCG 59.483 55.000 0.00 0.00 40.11 4.44
3815 5240 1.512156 TTCTCGCAGGGAAAAACCGC 61.512 55.000 0.00 0.00 40.11 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 53 3.551407 GGGGATCGCCTGAGGGTC 61.551 72.222 21.11 0.00 34.45 4.46
188 198 1.371635 CAAACCCGCCGAAAAGCAG 60.372 57.895 0.00 0.00 0.00 4.24
249 259 2.474410 AGAAAACCTAGCTTCACCCG 57.526 50.000 0.00 0.00 0.00 5.28
253 263 3.585862 CGCAGTAGAAAACCTAGCTTCA 58.414 45.455 0.00 0.00 0.00 3.02
274 284 1.449070 CCTAAAACCGCGGACTCCC 60.449 63.158 35.90 0.00 0.00 4.30
279 289 1.945355 GCTTAACCCTAAAACCGCGGA 60.945 52.381 35.90 8.44 0.00 5.54
307 317 2.653130 GAACCCGTATCGGCGTCG 60.653 66.667 1.15 1.15 46.86 5.12
326 336 2.279517 CGGTCCTATCGGCTGCAC 60.280 66.667 0.50 0.00 0.00 4.57
371 393 7.923414 ATAGAACCCTGAATAACAAGAACAC 57.077 36.000 0.00 0.00 0.00 3.32
378 401 9.762381 ACCAAATAAATAGAACCCTGAATAACA 57.238 29.630 0.00 0.00 0.00 2.41
384 407 4.879545 GCGACCAAATAAATAGAACCCTGA 59.120 41.667 0.00 0.00 0.00 3.86
389 412 4.904154 GCATCGCGACCAAATAAATAGAAC 59.096 41.667 12.93 0.00 0.00 3.01
425 449 3.056465 GCGGAATAACAAATCCCCAACAA 60.056 43.478 0.00 0.00 31.73 2.83
430 454 2.099098 CACAGCGGAATAACAAATCCCC 59.901 50.000 0.00 0.00 31.73 4.81
431 455 3.013921 TCACAGCGGAATAACAAATCCC 58.986 45.455 0.00 0.00 31.73 3.85
444 473 0.947244 ACAAGCTTTTCTCACAGCGG 59.053 50.000 0.00 0.00 41.24 5.52
446 475 3.058639 CCTACACAAGCTTTTCTCACAGC 60.059 47.826 0.00 0.00 36.16 4.40
450 481 4.040461 AGCTACCTACACAAGCTTTTCTCA 59.960 41.667 0.00 0.00 43.97 3.27
453 484 3.120165 GCAGCTACCTACACAAGCTTTTC 60.120 47.826 0.00 0.00 43.97 2.29
467 498 1.897560 ACAAGTCCAAAGCAGCTACC 58.102 50.000 0.00 0.00 0.00 3.18
475 506 6.868622 AGTAGAGCTACATACAAGTCCAAAG 58.131 40.000 10.04 0.00 38.48 2.77
476 507 6.852420 AGTAGAGCTACATACAAGTCCAAA 57.148 37.500 10.04 0.00 38.48 3.28
478 509 5.127194 CCAAGTAGAGCTACATACAAGTCCA 59.873 44.000 10.04 0.00 38.48 4.02
479 510 5.593010 CCAAGTAGAGCTACATACAAGTCC 58.407 45.833 10.04 0.00 38.48 3.85
481 512 4.440250 CGCCAAGTAGAGCTACATACAAGT 60.440 45.833 10.04 0.00 38.48 3.16
485 516 2.862921 GCCGCCAAGTAGAGCTACATAC 60.863 54.545 10.04 0.00 38.48 2.39
490 521 2.782222 CCGCCGCCAAGTAGAGCTA 61.782 63.158 0.00 0.00 0.00 3.32
506 537 2.625823 ATCAAAACACAGGGCGCCG 61.626 57.895 22.54 10.51 0.00 6.46
508 539 1.734117 GCATCAAAACACAGGGCGC 60.734 57.895 0.00 0.00 0.00 6.53
509 540 0.109597 GAGCATCAAAACACAGGGCG 60.110 55.000 0.00 0.00 33.17 6.13
561 592 3.059834 CACGCAAAATTTCAGCATACAGC 59.940 43.478 13.81 0.00 46.19 4.40
562 593 4.475028 TCACGCAAAATTTCAGCATACAG 58.525 39.130 13.81 2.57 0.00 2.74
563 594 4.495911 TCACGCAAAATTTCAGCATACA 57.504 36.364 13.81 0.00 0.00 2.29
564 595 5.722051 GCAATCACGCAAAATTTCAGCATAC 60.722 40.000 13.81 0.00 0.00 2.39
565 596 4.326817 GCAATCACGCAAAATTTCAGCATA 59.673 37.500 13.81 1.86 0.00 3.14
566 597 3.123959 GCAATCACGCAAAATTTCAGCAT 59.876 39.130 13.81 0.00 0.00 3.79
567 598 2.475864 GCAATCACGCAAAATTTCAGCA 59.524 40.909 13.81 0.00 0.00 4.41
577 608 2.679934 CCTCGCAGCAATCACGCAA 61.680 57.895 0.00 0.00 0.00 4.85
584 615 0.250467 ACAACTGTCCTCGCAGCAAT 60.250 50.000 0.00 0.00 39.96 3.56
586 617 0.038251 CTACAACTGTCCTCGCAGCA 60.038 55.000 0.00 0.00 39.96 4.41
591 622 0.389948 GCCCACTACAACTGTCCTCG 60.390 60.000 0.00 0.00 0.00 4.63
607 638 3.828875 ATAACTAGACAGAGCTTGCCC 57.171 47.619 0.00 0.00 0.00 5.36
619 650 9.547753 GATTCCTTTGTGCTCAATATAACTAGA 57.452 33.333 1.43 0.00 33.32 2.43
638 670 4.851639 AACTAGATGCACCTGATTCCTT 57.148 40.909 0.00 0.00 0.00 3.36
644 676 5.125417 GGCAAAAATAACTAGATGCACCTGA 59.875 40.000 0.00 0.00 35.57 3.86
645 677 5.343249 GGCAAAAATAACTAGATGCACCTG 58.657 41.667 0.00 0.00 35.57 4.00
648 680 4.981794 ACGGCAAAAATAACTAGATGCAC 58.018 39.130 0.00 0.00 35.57 4.57
650 682 5.220209 GCAAACGGCAAAAATAACTAGATGC 60.220 40.000 0.00 0.00 43.97 3.91
651 683 6.317910 GCAAACGGCAAAAATAACTAGATG 57.682 37.500 0.00 0.00 43.97 2.90
666 698 0.944386 TTGTCAAGAGAGCAAACGGC 59.056 50.000 0.00 0.00 45.30 5.68
667 699 3.070018 AGATTGTCAAGAGAGCAAACGG 58.930 45.455 0.00 0.00 0.00 4.44
668 700 3.742882 TCAGATTGTCAAGAGAGCAAACG 59.257 43.478 0.00 0.00 0.00 3.60
669 701 5.679734 TTCAGATTGTCAAGAGAGCAAAC 57.320 39.130 0.00 0.00 0.00 2.93
672 704 3.750130 GCTTTCAGATTGTCAAGAGAGCA 59.250 43.478 9.61 0.00 37.92 4.26
673 705 3.750130 TGCTTTCAGATTGTCAAGAGAGC 59.250 43.478 8.21 8.21 38.34 4.09
674 706 5.469421 ACTTGCTTTCAGATTGTCAAGAGAG 59.531 40.000 6.77 0.00 35.97 3.20
690 722 1.410153 CTTGCCCTTGACACTTGCTTT 59.590 47.619 0.00 0.00 0.00 3.51
694 726 3.525268 AAAACTTGCCCTTGACACTTG 57.475 42.857 0.00 0.00 0.00 3.16
717 749 1.202521 TGCATCACACGAGACACAACT 60.203 47.619 0.00 0.00 0.00 3.16
718 750 1.217001 TGCATCACACGAGACACAAC 58.783 50.000 0.00 0.00 0.00 3.32
719 751 2.168326 ATGCATCACACGAGACACAA 57.832 45.000 0.00 0.00 0.00 3.33
723 757 5.464722 AGATTTCATATGCATCACACGAGAC 59.535 40.000 0.19 0.00 0.00 3.36
728 762 6.910972 CAGACAAGATTTCATATGCATCACAC 59.089 38.462 0.19 0.00 0.00 3.82
730 764 6.436261 CCAGACAAGATTTCATATGCATCAC 58.564 40.000 0.19 5.80 0.00 3.06
733 767 5.009710 CAGCCAGACAAGATTTCATATGCAT 59.990 40.000 3.79 3.79 0.00 3.96
744 778 5.636903 AACATATACCAGCCAGACAAGAT 57.363 39.130 0.00 0.00 0.00 2.40
749 783 3.278574 TGCAAACATATACCAGCCAGAC 58.721 45.455 0.00 0.00 0.00 3.51
755 789 7.041635 TGAATCCATTGCAAACATATACCAG 57.958 36.000 1.71 0.00 0.00 4.00
757 791 7.385752 CCATTGAATCCATTGCAAACATATACC 59.614 37.037 1.71 0.00 0.00 2.73
763 797 4.620589 ACCATTGAATCCATTGCAAACA 57.379 36.364 1.71 0.00 0.00 2.83
783 817 6.932947 AGTCTACACAGAACCCAGTTAATAC 58.067 40.000 0.00 0.00 30.85 1.89
807 841 7.334171 CACATAACTCATTCTGTGTATGGACAA 59.666 37.037 0.00 0.00 37.85 3.18
820 854 6.097839 TGGTACTACCTCCACATAACTCATTC 59.902 42.308 6.79 0.00 39.58 2.67
822 856 5.525484 TGGTACTACCTCCACATAACTCAT 58.475 41.667 6.79 0.00 39.58 2.90
826 860 5.363005 ACATCTGGTACTACCTCCACATAAC 59.637 44.000 6.79 0.00 39.58 1.89
831 865 4.820894 AAACATCTGGTACTACCTCCAC 57.179 45.455 6.79 0.00 39.58 4.02
836 870 7.012989 AGACAAACAAAAACATCTGGTACTACC 59.987 37.037 0.00 0.00 39.22 3.18
843 877 5.519927 GGTCAAGACAAACAAAAACATCTGG 59.480 40.000 2.29 0.00 0.00 3.86
854 888 4.946772 TCAACAAGATGGTCAAGACAAACA 59.053 37.500 2.29 0.00 0.00 2.83
871 905 8.257306 TGTAGTGTATGAAGATAGCATCAACAA 58.743 33.333 0.00 0.00 0.00 2.83
933 970 5.351189 GTGAAAAGAGGTGCAACAAAACATT 59.649 36.000 3.64 0.00 39.98 2.71
952 989 8.358895 TGTTAAGATCAATCAAGCAATGTGAAA 58.641 29.630 0.00 0.00 0.00 2.69
955 992 9.961265 ATATGTTAAGATCAATCAAGCAATGTG 57.039 29.630 0.00 0.00 0.00 3.21
956 993 9.961265 CATATGTTAAGATCAATCAAGCAATGT 57.039 29.630 0.00 0.00 0.00 2.71
972 1009 9.869844 GCTGTAGCAGAAATAACATATGTTAAG 57.130 33.333 27.45 17.96 41.11 1.85
973 1010 8.836413 GGCTGTAGCAGAAATAACATATGTTAA 58.164 33.333 27.45 14.14 42.17 2.01
979 1017 5.764686 CCATGGCTGTAGCAGAAATAACATA 59.235 40.000 0.00 0.00 44.36 2.29
982 1020 3.243201 GCCATGGCTGTAGCAGAAATAAC 60.243 47.826 29.98 0.00 44.36 1.89
990 1028 1.851065 TTCCTGCCATGGCTGTAGCA 61.851 55.000 35.53 14.98 44.36 3.49
1093 1136 6.528537 AACAATGAGCAGCCATATAAAACA 57.471 33.333 0.00 0.00 0.00 2.83
1129 1172 2.805671 GGGTTGCAACTTGGTTAAATGC 59.194 45.455 27.64 7.45 37.52 3.56
1259 1302 1.938577 CCCATGTCATCAAAGCTCTCG 59.061 52.381 0.00 0.00 0.00 4.04
1298 1341 6.431234 CAGTACCATAAGCATAAATTCCCCTC 59.569 42.308 0.00 0.00 0.00 4.30
1301 1344 6.515035 GCACAGTACCATAAGCATAAATTCCC 60.515 42.308 0.00 0.00 0.00 3.97
1344 2037 8.328758 TGAAGAATACCAATGAAGTAGGACAAT 58.671 33.333 0.00 0.00 0.00 2.71
1650 2706 3.199880 ACTGAAGTTCCTCCAACACAG 57.800 47.619 0.00 0.00 42.39 3.66
1722 2778 2.904866 TCAAACACACGCCCAGGC 60.905 61.111 0.00 0.00 37.85 4.85
1728 2784 0.385974 GGAGCATGTCAAACACACGC 60.386 55.000 0.00 0.00 44.94 5.34
1845 2903 9.162793 GATGCAAAATATTACAGATGAAGAACG 57.837 33.333 0.00 0.00 0.00 3.95
1867 3208 8.338259 CAATAAACTGTGAAGTATACCAGATGC 58.662 37.037 12.19 0.00 0.00 3.91
1886 3227 6.694411 GCAATGATGGTGTCAGATCAATAAAC 59.306 38.462 0.00 0.00 40.92 2.01
1887 3228 6.377712 TGCAATGATGGTGTCAGATCAATAAA 59.622 34.615 0.00 0.00 40.92 1.40
1893 3234 3.693085 AGTTGCAATGATGGTGTCAGATC 59.307 43.478 0.59 0.00 40.92 2.75
1928 3269 8.272889 TGCCTTAGATAGTCTACTAAGAGAACA 58.727 37.037 19.96 13.64 44.55 3.18
1930 3271 9.509956 GATGCCTTAGATAGTCTACTAAGAGAA 57.490 37.037 19.96 11.56 44.55 2.87
1931 3272 8.661345 TGATGCCTTAGATAGTCTACTAAGAGA 58.339 37.037 19.96 12.02 44.55 3.10
1932 3273 8.856153 TGATGCCTTAGATAGTCTACTAAGAG 57.144 38.462 19.96 14.57 44.55 2.85
1933 3274 9.456147 GATGATGCCTTAGATAGTCTACTAAGA 57.544 37.037 19.96 9.64 44.55 2.10
1935 3276 9.015367 GTGATGATGCCTTAGATAGTCTACTAA 57.985 37.037 0.00 0.00 31.39 2.24
1937 3278 7.237982 AGTGATGATGCCTTAGATAGTCTACT 58.762 38.462 0.00 0.00 0.00 2.57
1938 3279 7.461182 AGTGATGATGCCTTAGATAGTCTAC 57.539 40.000 0.00 0.00 0.00 2.59
1939 3280 9.760926 ATTAGTGATGATGCCTTAGATAGTCTA 57.239 33.333 0.00 0.00 0.00 2.59
1940 3281 8.663209 ATTAGTGATGATGCCTTAGATAGTCT 57.337 34.615 0.00 0.00 0.00 3.24
1941 3282 8.526978 TGATTAGTGATGATGCCTTAGATAGTC 58.473 37.037 0.00 0.00 0.00 2.59
1942 3283 8.310382 GTGATTAGTGATGATGCCTTAGATAGT 58.690 37.037 0.00 0.00 0.00 2.12
1943 3284 8.530311 AGTGATTAGTGATGATGCCTTAGATAG 58.470 37.037 0.00 0.00 0.00 2.08
1944 3285 8.427902 AGTGATTAGTGATGATGCCTTAGATA 57.572 34.615 0.00 0.00 0.00 1.98
1945 3286 7.313740 AGTGATTAGTGATGATGCCTTAGAT 57.686 36.000 0.00 0.00 0.00 1.98
1946 3287 6.737720 AGTGATTAGTGATGATGCCTTAGA 57.262 37.500 0.00 0.00 0.00 2.10
1949 3290 7.512130 TGATTAGTGATTAGTGATGATGCCTT 58.488 34.615 0.00 0.00 0.00 4.35
1952 3293 8.494347 GTTCTGATTAGTGATTAGTGATGATGC 58.506 37.037 0.00 0.00 0.00 3.91
1953 3294 9.761504 AGTTCTGATTAGTGATTAGTGATGATG 57.238 33.333 0.00 0.00 0.00 3.07
1962 3303 8.198109 GCCAGACTTAGTTCTGATTAGTGATTA 58.802 37.037 11.47 0.00 45.19 1.75
1978 3364 9.871238 TTATAACTTAGAACTTGCCAGACTTAG 57.129 33.333 0.00 0.00 0.00 2.18
1982 3368 9.162764 TGATTTATAACTTAGAACTTGCCAGAC 57.837 33.333 0.00 0.00 0.00 3.51
2006 3392 6.875948 TGCAGCTCTTTAAACTTAACATGA 57.124 33.333 0.00 0.00 0.00 3.07
2007 3393 9.229784 CATATGCAGCTCTTTAAACTTAACATG 57.770 33.333 0.00 0.00 0.00 3.21
2013 3399 7.555554 ACAGATCATATGCAGCTCTTTAAACTT 59.444 33.333 0.00 0.00 0.00 2.66
2015 3401 7.256756 ACAGATCATATGCAGCTCTTTAAAC 57.743 36.000 0.00 0.00 0.00 2.01
2017 3403 7.337689 ACAAACAGATCATATGCAGCTCTTTAA 59.662 33.333 0.00 0.00 0.00 1.52
2018 3404 6.825213 ACAAACAGATCATATGCAGCTCTTTA 59.175 34.615 0.00 0.00 0.00 1.85
2021 3407 4.575236 CACAAACAGATCATATGCAGCTCT 59.425 41.667 0.00 0.00 0.00 4.09
2023 3409 4.267536 ACACAAACAGATCATATGCAGCT 58.732 39.130 0.00 0.00 0.00 4.24
2025 3411 9.229784 GAAATTACACAAACAGATCATATGCAG 57.770 33.333 0.00 0.00 0.00 4.41
2026 3412 8.738106 TGAAATTACACAAACAGATCATATGCA 58.262 29.630 0.00 0.00 0.00 3.96
2027 3413 9.740239 ATGAAATTACACAAACAGATCATATGC 57.260 29.630 0.00 0.00 0.00 3.14
2031 3417 9.630098 GACAATGAAATTACACAAACAGATCAT 57.370 29.630 0.00 0.00 32.46 2.45
2074 3460 9.325198 CATCAAGTGCCATACTAAGTAAATGTA 57.675 33.333 0.00 0.00 39.18 2.29
2075 3461 7.829211 ACATCAAGTGCCATACTAAGTAAATGT 59.171 33.333 0.00 0.00 39.18 2.71
2092 3478 7.810766 ACAAAAGTAACAACAACATCAAGTG 57.189 32.000 0.00 0.00 0.00 3.16
2374 3760 0.901827 ACAGGTCACACAGTGTGTCA 59.098 50.000 28.97 11.62 43.92 3.58
2569 3955 0.610174 GCAGGTCAGTGGTGATGAGA 59.390 55.000 0.00 0.00 34.36 3.27
2593 3979 0.657840 GCTGGACATCAATACCACGC 59.342 55.000 0.00 0.00 0.00 5.34
2830 4216 3.053826 ACCCCCTTACCATATGTTCTCC 58.946 50.000 1.24 0.00 0.00 3.71
2886 4272 3.447229 CCACCCACAGACAAGAAAGTTTT 59.553 43.478 0.00 0.00 0.00 2.43
2887 4273 3.023832 CCACCCACAGACAAGAAAGTTT 58.976 45.455 0.00 0.00 0.00 2.66
3047 4445 0.673022 GAGGACTCCAGCAACAGCAG 60.673 60.000 0.00 0.00 0.00 4.24
3230 4629 9.091220 GTGGTCATAAGTAGATAAATACTCCCT 57.909 37.037 0.00 0.00 34.90 4.20
3234 4633 8.298140 GCGAGTGGTCATAAGTAGATAAATACT 58.702 37.037 0.00 0.00 37.61 2.12
3235 4634 8.080417 TGCGAGTGGTCATAAGTAGATAAATAC 58.920 37.037 0.00 0.00 0.00 1.89
3238 4637 6.459670 TGCGAGTGGTCATAAGTAGATAAA 57.540 37.500 0.00 0.00 0.00 1.40
3249 4648 2.174334 GCAACATGCGAGTGGTCAT 58.826 52.632 0.00 0.00 31.71 3.06
3263 4662 5.405935 AATCCTGAAACCCAAATAGCAAC 57.594 39.130 0.00 0.00 0.00 4.17
3265 4664 7.582719 AGTATAATCCTGAAACCCAAATAGCA 58.417 34.615 0.00 0.00 0.00 3.49
3266 4665 8.465273 AAGTATAATCCTGAAACCCAAATAGC 57.535 34.615 0.00 0.00 0.00 2.97
3270 4680 8.167392 TCAGAAAGTATAATCCTGAAACCCAAA 58.833 33.333 3.66 0.00 31.72 3.28
3272 4682 7.265599 TCAGAAAGTATAATCCTGAAACCCA 57.734 36.000 3.66 0.00 31.72 4.51
3288 4698 9.660180 GTACAGAGAATAGGAATTTCAGAAAGT 57.340 33.333 1.28 0.00 0.00 2.66
3310 4731 8.692710 CCCAGTATATTAGTTTCACTCAGTACA 58.307 37.037 0.00 0.00 0.00 2.90
3328 4749 6.904654 ACAGGATTTACAGGTAACCCAGTATA 59.095 38.462 10.54 0.00 33.25 1.47
3370 4791 2.899256 CTCTCTGGGAGGATGAGAATCC 59.101 54.545 0.00 0.00 41.02 3.01
3371 4792 3.828451 CTCTCTCTGGGAGGATGAGAATC 59.172 52.174 4.41 0.00 42.10 2.52
3375 4796 2.754012 ACTCTCTCTGGGAGGATGAG 57.246 55.000 4.41 0.00 42.10 2.90
3376 4797 4.609866 TTTACTCTCTCTGGGAGGATGA 57.390 45.455 4.41 0.00 42.10 2.92
3391 4812 8.948631 TGACATTTCACCATCTCTATTTACTC 57.051 34.615 0.00 0.00 0.00 2.59
3392 4813 9.553064 GATGACATTTCACCATCTCTATTTACT 57.447 33.333 0.00 0.00 35.18 2.24
3394 4815 8.717717 AGGATGACATTTCACCATCTCTATTTA 58.282 33.333 0.00 0.00 37.44 1.40
3395 4816 7.580910 AGGATGACATTTCACCATCTCTATTT 58.419 34.615 0.00 0.00 37.44 1.40
3398 4819 6.841229 ACTAGGATGACATTTCACCATCTCTA 59.159 38.462 0.00 0.00 37.44 2.43
3399 4820 5.664908 ACTAGGATGACATTTCACCATCTCT 59.335 40.000 0.00 0.00 37.44 3.10
3400 4821 5.923204 ACTAGGATGACATTTCACCATCTC 58.077 41.667 0.00 0.00 37.44 2.75
3401 4822 5.965033 ACTAGGATGACATTTCACCATCT 57.035 39.130 0.00 0.00 37.44 2.90
3402 4823 5.882557 ACAACTAGGATGACATTTCACCATC 59.117 40.000 4.95 0.00 33.38 3.51
3404 4825 5.241403 ACAACTAGGATGACATTTCACCA 57.759 39.130 4.95 0.00 33.38 4.17
3405 4826 7.308782 CTAACAACTAGGATGACATTTCACC 57.691 40.000 4.95 0.00 33.38 4.02
3420 4845 2.799017 TGAGCTCCGTCCTAACAACTA 58.201 47.619 12.15 0.00 0.00 2.24
3447 4872 2.080654 TGGTGTGAAAGGGGGAAAAG 57.919 50.000 0.00 0.00 0.00 2.27
3448 4873 2.785357 ATGGTGTGAAAGGGGGAAAA 57.215 45.000 0.00 0.00 0.00 2.29
3449 4874 2.785357 AATGGTGTGAAAGGGGGAAA 57.215 45.000 0.00 0.00 0.00 3.13
3450 4875 2.703007 CAAAATGGTGTGAAAGGGGGAA 59.297 45.455 0.00 0.00 0.00 3.97
3451 4876 2.324541 CAAAATGGTGTGAAAGGGGGA 58.675 47.619 0.00 0.00 0.00 4.81
3452 4877 2.046292 ACAAAATGGTGTGAAAGGGGG 58.954 47.619 0.00 0.00 0.00 5.40
3453 4878 3.836365 AACAAAATGGTGTGAAAGGGG 57.164 42.857 0.00 0.00 0.00 4.79
3454 4879 4.306600 GCTAACAAAATGGTGTGAAAGGG 58.693 43.478 0.00 0.00 0.00 3.95
3455 4880 3.980775 CGCTAACAAAATGGTGTGAAAGG 59.019 43.478 0.00 0.00 0.00 3.11
3456 4881 4.606961 ACGCTAACAAAATGGTGTGAAAG 58.393 39.130 0.00 0.00 0.00 2.62
3457 4882 4.640789 ACGCTAACAAAATGGTGTGAAA 57.359 36.364 0.00 0.00 0.00 2.69
3458 4883 4.142359 ACAACGCTAACAAAATGGTGTGAA 60.142 37.500 0.00 0.00 0.00 3.18
3459 4884 3.378742 ACAACGCTAACAAAATGGTGTGA 59.621 39.130 0.00 0.00 0.00 3.58
3460 4885 3.485378 CACAACGCTAACAAAATGGTGTG 59.515 43.478 0.00 0.00 0.00 3.82
3461 4886 3.701241 CACAACGCTAACAAAATGGTGT 58.299 40.909 0.00 0.00 0.00 4.16
3462 4887 2.470999 GCACAACGCTAACAAAATGGTG 59.529 45.455 0.00 0.00 37.77 4.17
3463 4888 2.738135 GCACAACGCTAACAAAATGGT 58.262 42.857 0.00 0.00 37.77 3.55
3475 4900 0.510359 CTCTCACTCAAGCACAACGC 59.490 55.000 0.00 0.00 42.91 4.84
3476 4901 1.143305 CCTCTCACTCAAGCACAACG 58.857 55.000 0.00 0.00 0.00 4.10
3477 4902 0.871057 GCCTCTCACTCAAGCACAAC 59.129 55.000 0.00 0.00 0.00 3.32
3478 4903 0.761187 AGCCTCTCACTCAAGCACAA 59.239 50.000 0.00 0.00 0.00 3.33
3479 4904 1.273606 GTAGCCTCTCACTCAAGCACA 59.726 52.381 0.00 0.00 0.00 4.57
3480 4905 1.548269 AGTAGCCTCTCACTCAAGCAC 59.452 52.381 0.00 0.00 0.00 4.40
3481 4906 1.547820 CAGTAGCCTCTCACTCAAGCA 59.452 52.381 0.00 0.00 0.00 3.91
3482 4907 1.821753 TCAGTAGCCTCTCACTCAAGC 59.178 52.381 0.00 0.00 0.00 4.01
3483 4908 4.261572 GCTATCAGTAGCCTCTCACTCAAG 60.262 50.000 0.00 0.00 46.14 3.02
3484 4909 3.634448 GCTATCAGTAGCCTCTCACTCAA 59.366 47.826 0.00 0.00 46.14 3.02
3485 4910 3.218453 GCTATCAGTAGCCTCTCACTCA 58.782 50.000 0.00 0.00 46.14 3.41
3486 4911 3.915437 GCTATCAGTAGCCTCTCACTC 57.085 52.381 0.00 0.00 46.14 3.51
3496 4921 1.601663 GGTCAGCAGCGCTATCAGTAG 60.602 57.143 10.99 0.00 36.40 2.57
3497 4922 0.385751 GGTCAGCAGCGCTATCAGTA 59.614 55.000 10.99 0.00 36.40 2.74
3498 4923 1.142748 GGTCAGCAGCGCTATCAGT 59.857 57.895 10.99 0.00 36.40 3.41
3499 4924 1.593750 GGGTCAGCAGCGCTATCAG 60.594 63.158 10.99 0.00 36.40 2.90
3500 4925 1.617018 AAGGGTCAGCAGCGCTATCA 61.617 55.000 10.99 0.00 36.40 2.15
3501 4926 0.878086 GAAGGGTCAGCAGCGCTATC 60.878 60.000 10.99 4.94 36.40 2.08
3502 4927 1.144936 GAAGGGTCAGCAGCGCTAT 59.855 57.895 10.99 0.00 36.40 2.97
3503 4928 2.579201 GAAGGGTCAGCAGCGCTA 59.421 61.111 10.99 0.00 36.40 4.26
3504 4929 4.400961 GGAAGGGTCAGCAGCGCT 62.401 66.667 2.64 2.64 40.77 5.92
3506 4931 3.551496 TTGGGAAGGGTCAGCAGCG 62.551 63.158 0.00 0.00 0.00 5.18
3507 4932 1.228552 TTTGGGAAGGGTCAGCAGC 60.229 57.895 0.00 0.00 0.00 5.25
3508 4933 0.895559 GGTTTGGGAAGGGTCAGCAG 60.896 60.000 0.00 0.00 0.00 4.24
3509 4934 1.152830 GGTTTGGGAAGGGTCAGCA 59.847 57.895 0.00 0.00 0.00 4.41
3510 4935 0.178961 AAGGTTTGGGAAGGGTCAGC 60.179 55.000 0.00 0.00 0.00 4.26
3511 4936 1.620822 CAAGGTTTGGGAAGGGTCAG 58.379 55.000 0.00 0.00 0.00 3.51
3512 4937 3.839979 CAAGGTTTGGGAAGGGTCA 57.160 52.632 0.00 0.00 0.00 4.02
3522 4947 1.898574 AGCAGGCGTCCAAGGTTTG 60.899 57.895 0.00 0.00 0.00 2.93
3523 4948 1.898574 CAGCAGGCGTCCAAGGTTT 60.899 57.895 0.00 0.00 0.00 3.27
3524 4949 2.281761 CAGCAGGCGTCCAAGGTT 60.282 61.111 0.00 0.00 0.00 3.50
3525 4950 2.818169 TTCAGCAGGCGTCCAAGGT 61.818 57.895 0.00 0.00 0.00 3.50
3526 4951 2.032528 TTCAGCAGGCGTCCAAGG 59.967 61.111 0.00 0.00 0.00 3.61
3527 4952 2.328099 GGTTCAGCAGGCGTCCAAG 61.328 63.158 0.00 0.00 0.00 3.61
3528 4953 2.281484 GGTTCAGCAGGCGTCCAA 60.281 61.111 0.00 0.00 0.00 3.53
3529 4954 3.240134 GAGGTTCAGCAGGCGTCCA 62.240 63.158 0.00 0.00 0.00 4.02
3530 4955 2.435059 GAGGTTCAGCAGGCGTCC 60.435 66.667 0.00 0.00 0.00 4.79
3531 4956 2.811317 CGAGGTTCAGCAGGCGTC 60.811 66.667 0.00 0.00 0.00 5.19
3532 4957 3.575351 GACGAGGTTCAGCAGGCGT 62.575 63.158 0.00 0.00 34.39 5.68
3533 4958 2.811317 GACGAGGTTCAGCAGGCG 60.811 66.667 0.00 0.00 0.00 5.52
3534 4959 1.739562 CAGACGAGGTTCAGCAGGC 60.740 63.158 0.00 0.00 0.00 4.85
3535 4960 1.079543 CCAGACGAGGTTCAGCAGG 60.080 63.158 0.00 0.00 0.00 4.85
3536 4961 1.668294 ACCAGACGAGGTTCAGCAG 59.332 57.895 0.00 0.00 39.34 4.24
3537 4962 3.870955 ACCAGACGAGGTTCAGCA 58.129 55.556 0.00 0.00 39.34 4.41
3543 4968 2.031163 GCTGCAACCAGACGAGGT 59.969 61.111 0.00 0.00 45.91 3.85
3544 4969 2.031516 CAGCTGCAACCAGACGAGG 61.032 63.158 0.00 0.00 41.77 4.63
3545 4970 2.031516 CCAGCTGCAACCAGACGAG 61.032 63.158 8.66 0.00 41.77 4.18
3546 4971 2.031012 CCAGCTGCAACCAGACGA 59.969 61.111 8.66 0.00 41.77 4.20
3547 4972 3.052082 CCCAGCTGCAACCAGACG 61.052 66.667 8.66 0.00 41.77 4.18
3548 4973 2.113986 ACCCAGCTGCAACCAGAC 59.886 61.111 8.66 0.00 41.77 3.51
3549 4974 2.113774 CACCCAGCTGCAACCAGA 59.886 61.111 8.66 0.00 41.77 3.86
3550 4975 1.829533 AACACCCAGCTGCAACCAG 60.830 57.895 8.66 0.00 42.13 4.00
3551 4976 2.126596 CAACACCCAGCTGCAACCA 61.127 57.895 8.66 0.00 0.00 3.67
3552 4977 2.127232 ACAACACCCAGCTGCAACC 61.127 57.895 8.66 0.00 0.00 3.77
3553 4978 1.066257 CACAACACCCAGCTGCAAC 59.934 57.895 8.66 0.00 0.00 4.17
3554 4979 2.784356 GCACAACACCCAGCTGCAA 61.784 57.895 8.66 0.00 0.00 4.08
3555 4980 3.218470 GCACAACACCCAGCTGCA 61.218 61.111 8.66 0.00 0.00 4.41
3556 4981 3.982241 GGCACAACACCCAGCTGC 61.982 66.667 8.66 0.00 0.00 5.25
3557 4982 3.663176 CGGCACAACACCCAGCTG 61.663 66.667 6.78 6.78 0.00 4.24
3558 4983 2.697147 AATCGGCACAACACCCAGCT 62.697 55.000 0.00 0.00 0.00 4.24
3559 4984 2.200170 GAATCGGCACAACACCCAGC 62.200 60.000 0.00 0.00 0.00 4.85
3560 4985 1.586154 GGAATCGGCACAACACCCAG 61.586 60.000 0.00 0.00 0.00 4.45
3561 4986 1.602323 GGAATCGGCACAACACCCA 60.602 57.895 0.00 0.00 0.00 4.51
3562 4987 1.586154 CTGGAATCGGCACAACACCC 61.586 60.000 0.00 0.00 0.00 4.61
3563 4988 1.875963 CTGGAATCGGCACAACACC 59.124 57.895 0.00 0.00 0.00 4.16
3564 4989 1.210155 GCTGGAATCGGCACAACAC 59.790 57.895 0.00 0.00 44.43 3.32
3565 4990 3.667087 GCTGGAATCGGCACAACA 58.333 55.556 0.00 0.00 44.43 3.33
3571 4996 3.521796 GGCCAAGCTGGAATCGGC 61.522 66.667 0.00 0.00 40.96 5.54
3572 4997 2.117156 CAGGCCAAGCTGGAATCGG 61.117 63.158 5.01 0.00 40.96 4.18
3573 4998 1.377725 ACAGGCCAAGCTGGAATCG 60.378 57.895 5.01 0.00 40.96 3.34
3574 4999 1.941999 GCACAGGCCAAGCTGGAATC 61.942 60.000 5.01 0.00 40.96 2.52
3575 5000 1.980772 GCACAGGCCAAGCTGGAAT 60.981 57.895 5.01 0.00 40.96 3.01
3576 5001 2.598394 GCACAGGCCAAGCTGGAA 60.598 61.111 5.01 0.00 40.96 3.53
3577 5002 3.573229 AGCACAGGCCAAGCTGGA 61.573 61.111 14.74 0.00 40.96 3.86
3580 5005 3.441712 AACCAGCACAGGCCAAGCT 62.442 57.895 5.01 8.33 42.56 3.74
3581 5006 2.914097 AACCAGCACAGGCCAAGC 60.914 61.111 5.01 5.62 42.56 4.01
3582 5007 3.045142 CAACCAGCACAGGCCAAG 58.955 61.111 5.01 0.00 42.56 3.61
3583 5008 3.225798 GCAACCAGCACAGGCCAA 61.226 61.111 5.01 0.00 44.79 4.52
3593 5018 2.758089 GCCGAGATGCTGCAACCAG 61.758 63.158 6.36 0.63 42.13 4.00
3594 5019 2.747460 GCCGAGATGCTGCAACCA 60.747 61.111 6.36 0.00 0.00 3.67
3595 5020 3.512516 GGCCGAGATGCTGCAACC 61.513 66.667 6.36 1.43 0.00 3.77
3596 5021 2.437359 AGGCCGAGATGCTGCAAC 60.437 61.111 6.36 3.53 0.00 4.17
3597 5022 2.437180 CAGGCCGAGATGCTGCAA 60.437 61.111 6.36 0.00 0.00 4.08
3598 5023 3.670637 GACAGGCCGAGATGCTGCA 62.671 63.158 4.13 4.13 0.00 4.41
3599 5024 2.894387 GACAGGCCGAGATGCTGC 60.894 66.667 0.00 0.00 0.00 5.25
3600 5025 2.202987 GGACAGGCCGAGATGCTG 60.203 66.667 0.00 0.00 0.00 4.41
3601 5026 3.474570 GGGACAGGCCGAGATGCT 61.475 66.667 0.00 0.00 37.63 3.79
3602 5027 3.474570 AGGGACAGGCCGAGATGC 61.475 66.667 0.00 0.00 37.63 3.91
3603 5028 2.503061 CAGGGACAGGCCGAGATG 59.497 66.667 0.00 0.00 37.63 2.90
3604 5029 3.474570 GCAGGGACAGGCCGAGAT 61.475 66.667 0.00 0.00 37.63 2.75
3606 5031 4.020617 TTGCAGGGACAGGCCGAG 62.021 66.667 0.00 0.00 37.63 4.63
3607 5032 4.329545 GTTGCAGGGACAGGCCGA 62.330 66.667 0.00 0.00 37.63 5.54
3610 5035 3.927481 GAGGGTTGCAGGGACAGGC 62.927 68.421 0.00 0.00 0.00 4.85
3611 5036 2.227036 AGAGGGTTGCAGGGACAGG 61.227 63.158 0.00 0.00 0.00 4.00
3612 5037 1.002868 CAGAGGGTTGCAGGGACAG 60.003 63.158 0.00 0.00 0.00 3.51
3613 5038 3.160585 CAGAGGGTTGCAGGGACA 58.839 61.111 0.00 0.00 0.00 4.02
3614 5039 2.360475 GCAGAGGGTTGCAGGGAC 60.360 66.667 0.00 0.00 43.53 4.46
3615 5040 2.156098 AAGCAGAGGGTTGCAGGGA 61.156 57.895 0.52 0.00 46.47 4.20
3616 5041 1.975407 CAAGCAGAGGGTTGCAGGG 60.975 63.158 0.52 0.00 46.47 4.45
3617 5042 3.677527 CAAGCAGAGGGTTGCAGG 58.322 61.111 0.52 0.00 46.47 4.85
3637 5062 2.747855 CGAGGTTCTGCAAGGGGC 60.748 66.667 0.00 0.00 45.13 5.80
3638 5063 1.376037 GACGAGGTTCTGCAAGGGG 60.376 63.158 0.00 0.00 0.00 4.79
3639 5064 1.738099 CGACGAGGTTCTGCAAGGG 60.738 63.158 0.00 0.00 0.00 3.95
3640 5065 1.006102 ACGACGAGGTTCTGCAAGG 60.006 57.895 0.00 0.00 0.00 3.61
3641 5066 0.597637 ACACGACGAGGTTCTGCAAG 60.598 55.000 0.00 0.00 0.00 4.01
3642 5067 0.874175 CACACGACGAGGTTCTGCAA 60.874 55.000 0.00 0.00 0.00 4.08
3643 5068 1.299850 CACACGACGAGGTTCTGCA 60.300 57.895 0.00 0.00 0.00 4.41
3644 5069 2.658707 GCACACGACGAGGTTCTGC 61.659 63.158 0.00 0.00 0.00 4.26
3645 5070 1.278172 CTGCACACGACGAGGTTCTG 61.278 60.000 0.00 0.00 0.00 3.02
3646 5071 1.007271 CTGCACACGACGAGGTTCT 60.007 57.895 0.00 0.00 0.00 3.01
3647 5072 2.658707 GCTGCACACGACGAGGTTC 61.659 63.158 0.00 0.00 0.00 3.62
3648 5073 2.661866 GCTGCACACGACGAGGTT 60.662 61.111 0.00 0.00 0.00 3.50
3649 5074 3.606662 AGCTGCACACGACGAGGT 61.607 61.111 0.00 0.00 0.00 3.85
3650 5075 3.108289 CAGCTGCACACGACGAGG 61.108 66.667 0.00 0.00 0.00 4.63
3651 5076 3.108289 CCAGCTGCACACGACGAG 61.108 66.667 8.66 0.00 0.00 4.18
3652 5077 3.601685 TCCAGCTGCACACGACGA 61.602 61.111 8.66 0.00 0.00 4.20
3653 5078 3.406361 GTCCAGCTGCACACGACG 61.406 66.667 8.66 0.00 0.00 5.12
3654 5079 3.406361 CGTCCAGCTGCACACGAC 61.406 66.667 20.40 15.07 34.06 4.34
3655 5080 3.439513 AACGTCCAGCTGCACACGA 62.440 57.895 27.65 10.95 36.14 4.35
3656 5081 2.967076 AACGTCCAGCTGCACACG 60.967 61.111 22.29 22.29 38.24 4.49
3657 5082 2.180204 ACAACGTCCAGCTGCACAC 61.180 57.895 8.83 3.71 0.00 3.82
3658 5083 2.179547 CACAACGTCCAGCTGCACA 61.180 57.895 8.83 0.00 0.00 4.57
3659 5084 2.633657 CACAACGTCCAGCTGCAC 59.366 61.111 8.66 1.82 0.00 4.57
3660 5085 3.279116 GCACAACGTCCAGCTGCA 61.279 61.111 8.66 0.00 0.00 4.41
3661 5086 2.974698 AGCACAACGTCCAGCTGC 60.975 61.111 8.66 0.00 35.72 5.25
3662 5087 2.941333 CAGCACAACGTCCAGCTG 59.059 61.111 17.68 17.68 46.98 4.24
3663 5088 0.952497 CATCAGCACAACGTCCAGCT 60.952 55.000 3.12 3.12 37.95 4.24
3664 5089 1.499056 CATCAGCACAACGTCCAGC 59.501 57.895 0.00 0.00 0.00 4.85
3665 5090 0.952497 AGCATCAGCACAACGTCCAG 60.952 55.000 0.00 0.00 45.49 3.86
3666 5091 0.534877 AAGCATCAGCACAACGTCCA 60.535 50.000 0.00 0.00 45.49 4.02
3667 5092 1.438651 TAAGCATCAGCACAACGTCC 58.561 50.000 0.00 0.00 45.49 4.79
3668 5093 2.412847 GGTTAAGCATCAGCACAACGTC 60.413 50.000 0.00 0.00 45.49 4.34
3669 5094 1.535462 GGTTAAGCATCAGCACAACGT 59.465 47.619 0.00 0.00 45.49 3.99
3670 5095 1.806542 AGGTTAAGCATCAGCACAACG 59.193 47.619 7.52 0.00 45.49 4.10
3671 5096 2.554032 ACAGGTTAAGCATCAGCACAAC 59.446 45.455 7.52 0.00 45.49 3.32
3672 5097 2.553602 CACAGGTTAAGCATCAGCACAA 59.446 45.455 7.52 0.00 45.49 3.33
3673 5098 2.153645 CACAGGTTAAGCATCAGCACA 58.846 47.619 7.52 0.00 45.49 4.57
3674 5099 1.135575 GCACAGGTTAAGCATCAGCAC 60.136 52.381 7.52 0.00 45.49 4.40
3675 5100 1.167851 GCACAGGTTAAGCATCAGCA 58.832 50.000 7.52 0.00 45.49 4.41
3676 5101 1.131883 CTGCACAGGTTAAGCATCAGC 59.868 52.381 7.52 6.01 37.68 4.26
3677 5102 1.131883 GCTGCACAGGTTAAGCATCAG 59.868 52.381 7.52 8.79 37.68 2.90
3678 5103 1.167851 GCTGCACAGGTTAAGCATCA 58.832 50.000 7.52 0.00 37.68 3.07
3679 5104 1.457346 AGCTGCACAGGTTAAGCATC 58.543 50.000 7.52 0.00 38.14 3.91
3680 5105 1.542915 CAAGCTGCACAGGTTAAGCAT 59.457 47.619 14.19 0.00 46.20 3.79
3681 5106 0.953727 CAAGCTGCACAGGTTAAGCA 59.046 50.000 14.19 0.00 46.20 3.91
3682 5107 0.387750 GCAAGCTGCACAGGTTAAGC 60.388 55.000 14.19 11.07 46.20 3.09
3683 5108 3.780925 GCAAGCTGCACAGGTTAAG 57.219 52.632 14.19 5.35 46.20 1.85
3709 5134 0.677098 AGCTGAGATGCTGCAACCAG 60.677 55.000 6.36 14.60 42.33 4.00
3710 5135 0.251033 AAGCTGAGATGCTGCAACCA 60.251 50.000 6.36 4.14 43.24 3.67
3711 5136 0.170561 CAAGCTGAGATGCTGCAACC 59.829 55.000 6.36 1.43 43.24 3.77
3712 5137 0.879765 ACAAGCTGAGATGCTGCAAC 59.120 50.000 6.36 3.53 43.24 4.17
3713 5138 1.162698 GACAAGCTGAGATGCTGCAA 58.837 50.000 6.36 0.00 43.24 4.08
3714 5139 1.017701 CGACAAGCTGAGATGCTGCA 61.018 55.000 4.13 4.13 43.24 4.41
3715 5140 1.714414 CGACAAGCTGAGATGCTGC 59.286 57.895 0.00 0.00 43.24 5.25
3716 5141 1.714414 GCGACAAGCTGAGATGCTG 59.286 57.895 0.00 0.00 43.24 4.41
3717 5142 4.198625 GCGACAAGCTGAGATGCT 57.801 55.556 0.00 0.00 46.40 3.79
3734 5159 2.095059 GGATGTTGTAACCAGCTGCAAG 60.095 50.000 8.66 0.00 0.00 4.01
3735 5160 1.885887 GGATGTTGTAACCAGCTGCAA 59.114 47.619 8.66 4.13 0.00 4.08
3736 5161 1.533625 GGATGTTGTAACCAGCTGCA 58.466 50.000 8.66 0.00 0.00 4.41
3737 5162 0.811281 GGGATGTTGTAACCAGCTGC 59.189 55.000 8.66 0.00 0.00 5.25
3738 5163 1.463674 GGGGATGTTGTAACCAGCTG 58.536 55.000 6.78 6.78 0.00 4.24
3739 5164 0.331616 GGGGGATGTTGTAACCAGCT 59.668 55.000 0.00 0.00 0.00 4.24
3740 5165 0.039035 TGGGGGATGTTGTAACCAGC 59.961 55.000 0.00 0.00 0.00 4.85
3741 5166 2.025416 TCATGGGGGATGTTGTAACCAG 60.025 50.000 0.00 0.00 33.29 4.00
3742 5167 1.996291 TCATGGGGGATGTTGTAACCA 59.004 47.619 0.00 0.00 33.29 3.67
3743 5168 2.375146 GTCATGGGGGATGTTGTAACC 58.625 52.381 0.00 0.00 33.29 2.85
3744 5169 2.014128 CGTCATGGGGGATGTTGTAAC 58.986 52.381 0.00 0.00 33.29 2.50
3745 5170 1.631388 ACGTCATGGGGGATGTTGTAA 59.369 47.619 0.00 0.00 33.31 2.41
3746 5171 1.281419 ACGTCATGGGGGATGTTGTA 58.719 50.000 0.00 0.00 33.31 2.41
3747 5172 1.209504 CTACGTCATGGGGGATGTTGT 59.790 52.381 0.00 0.00 38.04 3.32
3748 5173 1.953559 CTACGTCATGGGGGATGTTG 58.046 55.000 0.00 0.00 38.04 3.33
3749 5174 0.180406 GCTACGTCATGGGGGATGTT 59.820 55.000 0.00 0.00 38.04 2.71
3750 5175 0.980754 TGCTACGTCATGGGGGATGT 60.981 55.000 0.00 0.00 40.08 3.06
3751 5176 0.250038 CTGCTACGTCATGGGGGATG 60.250 60.000 0.00 0.00 0.00 3.51
3752 5177 0.691078 ACTGCTACGTCATGGGGGAT 60.691 55.000 0.00 0.00 0.00 3.85
3753 5178 1.305802 ACTGCTACGTCATGGGGGA 60.306 57.895 0.00 0.00 0.00 4.81
3754 5179 1.153369 CACTGCTACGTCATGGGGG 60.153 63.158 0.00 0.00 0.00 5.40
3755 5180 1.153369 CCACTGCTACGTCATGGGG 60.153 63.158 0.00 0.00 0.00 4.96
3756 5181 1.815421 GCCACTGCTACGTCATGGG 60.815 63.158 0.00 0.00 33.53 4.00
3757 5182 3.799753 GCCACTGCTACGTCATGG 58.200 61.111 0.00 0.00 33.53 3.66
3768 5193 2.670934 AAAGCGCCTGAGCCACTG 60.671 61.111 2.29 0.00 38.01 3.66
3769 5194 2.670934 CAAAGCGCCTGAGCCACT 60.671 61.111 2.29 0.00 38.01 4.00
3770 5195 4.410743 GCAAAGCGCCTGAGCCAC 62.411 66.667 2.29 0.00 38.01 5.01
3771 5196 4.953010 TGCAAAGCGCCTGAGCCA 62.953 61.111 2.29 0.00 41.33 4.75
3772 5197 4.112341 CTGCAAAGCGCCTGAGCC 62.112 66.667 2.29 0.00 41.33 4.70
3773 5198 1.577328 TTACTGCAAAGCGCCTGAGC 61.577 55.000 2.29 3.98 41.33 4.26
3774 5199 0.874390 TTTACTGCAAAGCGCCTGAG 59.126 50.000 2.29 4.57 41.33 3.35
3775 5200 1.001815 GTTTTACTGCAAAGCGCCTGA 60.002 47.619 2.29 0.00 41.33 3.86
3776 5201 1.001378 AGTTTTACTGCAAAGCGCCTG 60.001 47.619 2.29 2.58 41.33 4.85
3777 5202 1.318576 AGTTTTACTGCAAAGCGCCT 58.681 45.000 2.29 0.00 41.33 5.52
3778 5203 2.051423 GAAGTTTTACTGCAAAGCGCC 58.949 47.619 2.29 0.00 41.33 6.53
3779 5204 2.973879 GAGAAGTTTTACTGCAAAGCGC 59.026 45.455 0.00 0.00 42.89 5.92
3780 5205 3.218398 CGAGAAGTTTTACTGCAAAGCG 58.782 45.455 0.00 0.00 32.96 4.68
3781 5206 2.973879 GCGAGAAGTTTTACTGCAAAGC 59.026 45.455 0.00 0.00 0.00 3.51
3782 5207 4.209452 TGCGAGAAGTTTTACTGCAAAG 57.791 40.909 0.00 0.00 0.00 2.77
3783 5208 3.003275 CCTGCGAGAAGTTTTACTGCAAA 59.997 43.478 0.00 0.00 0.00 3.68
3784 5209 2.548057 CCTGCGAGAAGTTTTACTGCAA 59.452 45.455 0.00 0.00 0.00 4.08
3785 5210 2.143122 CCTGCGAGAAGTTTTACTGCA 58.857 47.619 0.00 0.00 0.00 4.41
3786 5211 1.464997 CCCTGCGAGAAGTTTTACTGC 59.535 52.381 0.00 0.00 0.00 4.40
3787 5212 3.040147 TCCCTGCGAGAAGTTTTACTG 57.960 47.619 0.00 0.00 0.00 2.74
3788 5213 3.764237 TTCCCTGCGAGAAGTTTTACT 57.236 42.857 0.00 0.00 0.00 2.24
3789 5214 4.823790 TTTTCCCTGCGAGAAGTTTTAC 57.176 40.909 0.00 0.00 0.00 2.01
3790 5215 4.037089 GGTTTTTCCCTGCGAGAAGTTTTA 59.963 41.667 0.00 0.00 0.00 1.52
3791 5216 3.181479 GGTTTTTCCCTGCGAGAAGTTTT 60.181 43.478 0.00 0.00 0.00 2.43
3792 5217 2.361119 GGTTTTTCCCTGCGAGAAGTTT 59.639 45.455 0.00 0.00 0.00 2.66
3793 5218 1.954382 GGTTTTTCCCTGCGAGAAGTT 59.046 47.619 0.00 0.00 0.00 2.66
3794 5219 1.605753 GGTTTTTCCCTGCGAGAAGT 58.394 50.000 0.00 0.00 0.00 3.01
3795 5220 0.517316 CGGTTTTTCCCTGCGAGAAG 59.483 55.000 0.00 0.00 0.00 2.85
3796 5221 1.512156 GCGGTTTTTCCCTGCGAGAA 61.512 55.000 0.00 0.00 0.00 2.87
3797 5222 1.964373 GCGGTTTTTCCCTGCGAGA 60.964 57.895 0.00 0.00 0.00 4.04
3798 5223 2.561373 GCGGTTTTTCCCTGCGAG 59.439 61.111 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.