Multiple sequence alignment - TraesCS7A01G412500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G412500 chr7A 100.000 2746 0 0 1 2746 603312219 603314964 0.000000e+00 5072.0
1 TraesCS7A01G412500 chr7A 93.676 253 14 2 2495 2746 159985450 159985199 7.180000e-101 377.0
2 TraesCS7A01G412500 chr7A 89.394 132 14 0 1947 2078 71629571 71629440 1.690000e-37 167.0
3 TraesCS7A01G412500 chr7D 91.698 1048 48 19 782 1824 523050673 523051686 0.000000e+00 1417.0
4 TraesCS7A01G412500 chr7D 90.057 352 32 3 82 430 523049802 523050153 1.160000e-123 453.0
5 TraesCS7A01G412500 chr7D 91.586 309 23 3 413 719 523050351 523050658 9.090000e-115 424.0
6 TraesCS7A01G412500 chr7D 88.953 344 17 12 2099 2421 523051681 523052024 3.290000e-109 405.0
7 TraesCS7A01G412500 chr7B 91.102 753 43 13 1051 1795 557170312 557171048 0.000000e+00 998.0
8 TraesCS7A01G412500 chr7B 91.246 297 22 4 425 719 557152030 557152324 4.260000e-108 401.0
9 TraesCS7A01G412500 chr7B 88.889 279 27 4 156 430 557151533 557151811 9.420000e-90 340.0
10 TraesCS7A01G412500 chr7B 88.764 267 22 2 782 1048 557152339 557152597 1.230000e-83 320.0
11 TraesCS7A01G412500 chr7B 91.824 159 13 0 2095 2253 557171098 557171256 3.560000e-54 222.0
12 TraesCS7A01G412500 chr7B 96.703 91 2 1 76 166 557150060 557150149 1.700000e-32 150.0
13 TraesCS7A01G412500 chr7B 100.000 32 0 0 1 32 342745375 342745344 2.950000e-05 60.2
14 TraesCS7A01G412500 chr7B 84.746 59 8 1 2412 2470 551498156 551498099 1.060000e-04 58.4
15 TraesCS7A01G412500 chr5A 97.021 235 6 1 2513 2746 491182273 491182507 7.130000e-106 394.0
16 TraesCS7A01G412500 chr5A 85.859 99 14 0 225 323 667745416 667745318 3.740000e-19 106.0
17 TraesCS7A01G412500 chr5A 92.982 57 4 0 1905 1961 607541272 607541216 1.750000e-12 84.2
18 TraesCS7A01G412500 chr5A 79.545 88 14 4 2412 2497 343048441 343048526 2.950000e-05 60.2
19 TraesCS7A01G412500 chr2A 96.624 237 7 1 2511 2746 30114157 30113921 2.560000e-105 392.0
20 TraesCS7A01G412500 chr2A 95.455 242 9 2 2506 2746 678833928 678834168 4.290000e-103 385.0
21 TraesCS7A01G412500 chr2A 89.922 129 13 0 1949 2077 25326779 25326907 1.690000e-37 167.0
22 TraesCS7A01G412500 chr2A 85.859 99 14 0 225 323 735154207 735154305 3.740000e-19 106.0
23 TraesCS7A01G412500 chr2A 100.000 50 0 0 1902 1951 39693630 39693679 2.910000e-15 93.5
24 TraesCS7A01G412500 chr2A 82.301 113 14 5 2402 2510 649483147 649483257 2.910000e-15 93.5
25 TraesCS7A01G412500 chr2A 86.441 59 8 0 2412 2470 776916642 776916700 6.350000e-07 65.8
26 TraesCS7A01G412500 chr2A 100.000 32 0 0 1 32 413077723 413077692 2.950000e-05 60.2
27 TraesCS7A01G412500 chr2A 100.000 31 0 0 2073 2103 685953641 685953671 1.060000e-04 58.4
28 TraesCS7A01G412500 chr3A 96.610 236 7 1 2512 2746 58917807 58917572 9.220000e-105 390.0
29 TraesCS7A01G412500 chr3A 96.596 235 7 1 2513 2746 3725946 3725712 3.320000e-104 388.0
30 TraesCS7A01G412500 chr3A 96.596 235 7 1 2513 2746 4259777 4259543 3.320000e-104 388.0
31 TraesCS7A01G412500 chr3A 92.395 263 14 5 2487 2746 697201430 697201171 1.200000e-98 370.0
32 TraesCS7A01G412500 chr6A 96.596 235 7 1 2513 2746 599671812 599671578 3.320000e-104 388.0
33 TraesCS7A01G412500 chr6A 96.000 50 2 0 1902 1951 75546237 75546286 6.300000e-12 82.4
34 TraesCS7A01G412500 chr6A 100.000 32 0 0 1 32 436065663 436065632 2.950000e-05 60.2
35 TraesCS7A01G412500 chr6A 100.000 32 0 0 1 32 515311634 515311603 2.950000e-05 60.2
36 TraesCS7A01G412500 chr6A 100.000 28 0 0 2073 2100 32793112 32793139 5.000000e-03 52.8
37 TraesCS7A01G412500 chr5D 87.097 155 19 1 1950 2104 299406155 299406308 1.010000e-39 174.0
38 TraesCS7A01G412500 chr5D 86.093 151 17 3 1929 2076 393056252 393056401 2.830000e-35 159.0
39 TraesCS7A01G412500 chr5D 84.848 99 15 0 225 323 3152293 3152391 1.740000e-17 100.0
40 TraesCS7A01G412500 chr5D 84.848 99 15 0 225 323 357571816 357571914 1.740000e-17 100.0
41 TraesCS7A01G412500 chr3B 86.709 158 20 1 1942 2099 157251647 157251803 1.010000e-39 174.0
42 TraesCS7A01G412500 chr5B 89.209 139 14 1 1942 2079 276944797 276944659 3.640000e-39 172.0
43 TraesCS7A01G412500 chr2B 88.489 139 13 3 1942 2079 548925004 548925140 6.080000e-37 165.0
44 TraesCS7A01G412500 chr2B 82.000 100 16 2 2412 2510 583403912 583404010 1.750000e-12 84.2
45 TraesCS7A01G412500 chr3D 89.231 130 14 0 1948 2077 614251090 614251219 2.190000e-36 163.0
46 TraesCS7A01G412500 chr3D 84.848 99 15 0 225 323 154707006 154706908 1.740000e-17 100.0
47 TraesCS7A01G412500 chr3D 87.013 77 10 0 247 323 366332379 366332455 1.350000e-13 87.9
48 TraesCS7A01G412500 chr3D 95.745 47 2 0 1902 1948 363249380 363249426 2.930000e-10 76.8
49 TraesCS7A01G412500 chr3D 97.368 38 1 0 1912 1949 153080405 153080442 6.350000e-07 65.8
50 TraesCS7A01G412500 chr3D 90.000 50 5 0 1902 1951 311668860 311668909 6.350000e-07 65.8
51 TraesCS7A01G412500 chr4B 85.714 147 21 0 1947 2093 661262965 661262819 3.660000e-34 156.0
52 TraesCS7A01G412500 chr4B 84.848 99 15 0 225 323 209168158 209168060 1.740000e-17 100.0
53 TraesCS7A01G412500 chr4B 84.848 99 15 0 225 323 252951570 252951668 1.740000e-17 100.0
54 TraesCS7A01G412500 chr4B 100.000 50 0 0 1902 1951 381380112 381380161 2.910000e-15 93.5
55 TraesCS7A01G412500 chr4B 98.113 53 1 0 1902 1954 460161321 460161373 2.910000e-15 93.5
56 TraesCS7A01G412500 chr4B 92.063 63 4 1 1889 1951 185238136 185238075 1.350000e-13 87.9
57 TraesCS7A01G412500 chr4B 100.000 31 0 0 1 31 204652182 204652212 1.060000e-04 58.4
58 TraesCS7A01G412500 chr4D 87.395 119 6 6 1888 1997 439780246 439780364 7.980000e-26 128.0
59 TraesCS7A01G412500 chr4D 84.848 99 15 0 225 323 123622070 123621972 1.740000e-17 100.0
60 TraesCS7A01G412500 chr4D 83.838 99 16 0 225 323 135022872 135022970 8.100000e-16 95.3
61 TraesCS7A01G412500 chr1A 90.909 77 5 2 1902 1977 114551622 114551547 4.840000e-18 102.0
62 TraesCS7A01G412500 chr1A 90.909 77 5 2 1902 1977 516370687 516370612 4.840000e-18 102.0
63 TraesCS7A01G412500 chr1A 87.805 82 6 3 1888 1969 566092574 566092651 2.910000e-15 93.5
64 TraesCS7A01G412500 chr1A 100.000 33 0 0 1 33 549405888 549405920 8.210000e-06 62.1
65 TraesCS7A01G412500 chr1A 97.143 35 0 1 1 34 537210601 537210567 1.060000e-04 58.4
66 TraesCS7A01G412500 chrUn 84.848 99 15 0 225 323 40103267 40103365 1.740000e-17 100.0
67 TraesCS7A01G412500 chrUn 84.848 99 15 0 225 323 407604298 407604200 1.740000e-17 100.0
68 TraesCS7A01G412500 chrUn 98.000 50 1 0 1902 1951 294932314 294932363 1.350000e-13 87.9
69 TraesCS7A01G412500 chrUn 95.238 42 1 1 1911 1951 74690498 74690539 6.350000e-07 65.8
70 TraesCS7A01G412500 chrUn 95.238 42 1 1 1911 1951 253063434 253063475 6.350000e-07 65.8
71 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 51681500 51681530 1.060000e-04 58.4
72 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 171358164 171358194 1.060000e-04 58.4
73 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 179255222 179255252 1.060000e-04 58.4
74 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 198105190 198105220 1.060000e-04 58.4
75 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 405655467 405655497 1.060000e-04 58.4
76 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 418864398 418864428 1.060000e-04 58.4
77 TraesCS7A01G412500 chrUn 100.000 31 0 0 1 31 429603278 429603248 1.060000e-04 58.4
78 TraesCS7A01G412500 chrUn 100.000 30 0 0 2 31 278426212 278426241 3.820000e-04 56.5
79 TraesCS7A01G412500 chrUn 100.000 30 0 0 2 31 411748546 411748575 3.820000e-04 56.5
80 TraesCS7A01G412500 chr1D 83.871 93 15 0 231 323 461627494 461627402 3.770000e-14 89.8
81 TraesCS7A01G412500 chr1D 100.000 32 0 0 1913 1944 3532020 3531989 2.950000e-05 60.2
82 TraesCS7A01G412500 chr1D 92.500 40 3 0 1912 1951 403491718 403491757 1.060000e-04 58.4
83 TraesCS7A01G412500 chr4A 97.436 39 1 0 1 39 669649281 669649243 1.760000e-07 67.6
84 TraesCS7A01G412500 chr6D 77.570 107 18 6 2402 2506 427222354 427222456 2.950000e-05 60.2
85 TraesCS7A01G412500 chr6B 84.746 59 8 1 2412 2470 348926572 348926629 1.060000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G412500 chr7A 603312219 603314964 2745 False 5072.00 5072 100.0000 1 2746 1 chr7A.!!$F1 2745
1 TraesCS7A01G412500 chr7D 523049802 523052024 2222 False 674.75 1417 90.5735 82 2421 4 chr7D.!!$F1 2339
2 TraesCS7A01G412500 chr7B 557170312 557171256 944 False 610.00 998 91.4630 1051 2253 2 chr7B.!!$F2 1202
3 TraesCS7A01G412500 chr7B 557150060 557152597 2537 False 302.75 401 91.4005 76 1048 4 chr7B.!!$F1 972

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
731 2354 0.035439 GCGGGGAATCCTTGACAAGA 60.035 55.0 16.99 3.48 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2588 4271 0.038618 GAACCGGAACCAATGCCAAC 60.039 55.0 9.46 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.263053 GTGTAACTATCCGGGCGTC 57.737 57.895 0.00 0.00 0.00 5.19
28 29 0.457035 GTGTAACTATCCGGGCGTCA 59.543 55.000 0.00 0.00 0.00 4.35
29 30 0.457035 TGTAACTATCCGGGCGTCAC 59.543 55.000 0.00 0.00 0.00 3.67
30 31 0.457035 GTAACTATCCGGGCGTCACA 59.543 55.000 0.00 0.00 0.00 3.58
31 32 1.068127 GTAACTATCCGGGCGTCACAT 59.932 52.381 0.00 0.00 0.00 3.21
32 33 0.104304 AACTATCCGGGCGTCACATC 59.896 55.000 0.00 0.00 0.00 3.06
33 34 0.755698 ACTATCCGGGCGTCACATCT 60.756 55.000 0.00 0.00 0.00 2.90
34 35 0.319040 CTATCCGGGCGTCACATCTG 60.319 60.000 0.00 0.00 0.00 2.90
35 36 1.040893 TATCCGGGCGTCACATCTGT 61.041 55.000 0.00 0.00 0.00 3.41
36 37 1.040893 ATCCGGGCGTCACATCTGTA 61.041 55.000 0.00 0.00 0.00 2.74
37 38 1.226974 CCGGGCGTCACATCTGTAG 60.227 63.158 0.00 0.00 0.00 2.74
38 39 1.663379 CCGGGCGTCACATCTGTAGA 61.663 60.000 0.00 0.00 0.00 2.59
39 40 0.172578 CGGGCGTCACATCTGTAGAA 59.827 55.000 0.00 0.00 0.00 2.10
40 41 1.202417 CGGGCGTCACATCTGTAGAAT 60.202 52.381 0.00 0.00 0.00 2.40
41 42 2.034179 CGGGCGTCACATCTGTAGAATA 59.966 50.000 0.00 0.00 0.00 1.75
42 43 3.490249 CGGGCGTCACATCTGTAGAATAA 60.490 47.826 0.00 0.00 0.00 1.40
43 44 4.632153 GGGCGTCACATCTGTAGAATAAT 58.368 43.478 0.00 0.00 0.00 1.28
44 45 5.057149 GGGCGTCACATCTGTAGAATAATT 58.943 41.667 0.00 0.00 0.00 1.40
45 46 5.527582 GGGCGTCACATCTGTAGAATAATTT 59.472 40.000 0.00 0.00 0.00 1.82
46 47 6.422223 GGCGTCACATCTGTAGAATAATTTG 58.578 40.000 0.00 0.00 0.00 2.32
47 48 6.037172 GGCGTCACATCTGTAGAATAATTTGT 59.963 38.462 0.00 0.00 0.00 2.83
48 49 7.414098 GGCGTCACATCTGTAGAATAATTTGTT 60.414 37.037 0.00 0.00 0.00 2.83
49 50 7.962918 GCGTCACATCTGTAGAATAATTTGTTT 59.037 33.333 0.00 0.00 0.00 2.83
279 1674 6.829229 TCGTTTGAGAGATAGTGGAGTTTA 57.171 37.500 0.00 0.00 0.00 2.01
305 1700 8.722342 TTCTTTAAACATTTACATCAACGAGC 57.278 30.769 0.00 0.00 0.00 5.03
336 1731 6.183360 GGTGGCTTGAGTACCATTTTCTAATC 60.183 42.308 0.00 0.00 38.46 1.75
369 1764 9.491675 ACATCATTTTAAAATTCATTCAGCACA 57.508 25.926 10.77 0.00 0.00 4.57
380 1776 9.715121 AAATTCATTCAGCACATGTTTTAGAAT 57.285 25.926 0.00 1.24 0.00 2.40
387 1783 9.624697 TTCAGCACATGTTTTAGAATTTACATC 57.375 29.630 0.00 0.00 0.00 3.06
389 1785 9.069078 CAGCACATGTTTTAGAATTTACATCAG 57.931 33.333 0.00 0.00 0.00 2.90
590 2212 2.183300 GTATGCCGCACTGGTCGA 59.817 61.111 0.00 0.00 41.21 4.20
598 2220 4.003788 CACTGGTCGAAGCCCCGT 62.004 66.667 0.00 0.00 0.00 5.28
644 2267 0.255890 TAGCAGTTGGATTGGGCCTC 59.744 55.000 4.53 0.00 0.00 4.70
687 2310 2.665000 CTGGGCAGCGAGAAAGGA 59.335 61.111 0.00 0.00 0.00 3.36
689 2312 0.393537 CTGGGCAGCGAGAAAGGATT 60.394 55.000 0.00 0.00 0.00 3.01
726 2349 4.830765 CGCGCGGGGAATCCTTGA 62.831 66.667 24.84 0.00 0.00 3.02
727 2350 3.202706 GCGCGGGGAATCCTTGAC 61.203 66.667 8.83 0.00 0.00 3.18
728 2351 2.267642 CGCGGGGAATCCTTGACA 59.732 61.111 0.00 0.00 0.00 3.58
729 2352 1.376683 CGCGGGGAATCCTTGACAA 60.377 57.895 0.00 0.00 0.00 3.18
730 2353 1.369091 CGCGGGGAATCCTTGACAAG 61.369 60.000 8.31 8.31 0.00 3.16
731 2354 0.035439 GCGGGGAATCCTTGACAAGA 60.035 55.000 16.99 3.48 0.00 3.02
744 2367 3.026630 TGACAAGAGAGCAACGGTTAG 57.973 47.619 0.00 0.00 0.00 2.34
746 2369 0.716108 CAAGAGAGCAACGGTTAGCG 59.284 55.000 1.14 1.14 35.48 4.26
747 2370 0.317479 AAGAGAGCAACGGTTAGCGT 59.683 50.000 2.83 2.83 35.48 5.07
748 2371 1.171308 AGAGAGCAACGGTTAGCGTA 58.829 50.000 10.51 0.00 35.48 4.42
749 2372 1.749634 AGAGAGCAACGGTTAGCGTAT 59.250 47.619 10.51 0.00 35.48 3.06
750 2373 2.117910 GAGAGCAACGGTTAGCGTATC 58.882 52.381 10.51 9.03 35.48 2.24
751 2374 1.749634 AGAGCAACGGTTAGCGTATCT 59.250 47.619 10.51 11.15 35.48 1.98
752 2375 2.117910 GAGCAACGGTTAGCGTATCTC 58.882 52.381 10.51 14.88 35.48 2.75
753 2376 1.749634 AGCAACGGTTAGCGTATCTCT 59.250 47.619 10.51 2.38 35.48 3.10
754 2377 2.947652 AGCAACGGTTAGCGTATCTCTA 59.052 45.455 10.51 0.00 35.48 2.43
755 2378 3.003482 AGCAACGGTTAGCGTATCTCTAG 59.997 47.826 10.51 0.00 35.48 2.43
756 2379 3.852572 GCAACGGTTAGCGTATCTCTAGG 60.853 52.174 10.51 0.00 0.00 3.02
757 2380 1.878734 ACGGTTAGCGTATCTCTAGGC 59.121 52.381 7.95 0.00 38.69 3.93
758 2381 1.878088 CGGTTAGCGTATCTCTAGGCA 59.122 52.381 0.00 0.00 40.41 4.75
759 2382 2.095668 CGGTTAGCGTATCTCTAGGCAG 60.096 54.545 0.00 0.00 40.41 4.85
760 2383 2.351932 GGTTAGCGTATCTCTAGGCAGC 60.352 54.545 0.00 0.00 40.41 5.25
761 2384 2.554893 GTTAGCGTATCTCTAGGCAGCT 59.445 50.000 0.00 0.00 40.41 4.24
762 2385 1.698506 AGCGTATCTCTAGGCAGCTT 58.301 50.000 0.00 0.00 40.41 3.74
763 2386 2.035632 AGCGTATCTCTAGGCAGCTTT 58.964 47.619 0.00 0.00 40.41 3.51
764 2387 2.131183 GCGTATCTCTAGGCAGCTTTG 58.869 52.381 0.00 0.00 38.36 2.77
765 2388 2.482142 GCGTATCTCTAGGCAGCTTTGT 60.482 50.000 0.00 0.00 38.36 2.83
766 2389 3.786635 CGTATCTCTAGGCAGCTTTGTT 58.213 45.455 0.00 0.00 0.00 2.83
767 2390 3.799420 CGTATCTCTAGGCAGCTTTGTTC 59.201 47.826 0.00 0.00 0.00 3.18
768 2391 4.440802 CGTATCTCTAGGCAGCTTTGTTCT 60.441 45.833 0.00 0.00 0.00 3.01
769 2392 4.566426 ATCTCTAGGCAGCTTTGTTCTT 57.434 40.909 0.00 0.00 0.00 2.52
770 2393 5.683876 ATCTCTAGGCAGCTTTGTTCTTA 57.316 39.130 0.00 0.00 0.00 2.10
771 2394 5.483685 TCTCTAGGCAGCTTTGTTCTTAA 57.516 39.130 0.00 0.00 0.00 1.85
772 2395 5.865085 TCTCTAGGCAGCTTTGTTCTTAAA 58.135 37.500 0.00 0.00 0.00 1.52
773 2396 6.296026 TCTCTAGGCAGCTTTGTTCTTAAAA 58.704 36.000 0.00 0.00 0.00 1.52
774 2397 6.770785 TCTCTAGGCAGCTTTGTTCTTAAAAA 59.229 34.615 0.00 0.00 0.00 1.94
814 2437 3.706802 AGATCTCGCGGATATGCATAG 57.293 47.619 12.79 0.00 34.33 2.23
818 2441 0.170339 TCGCGGATATGCATAGTCGG 59.830 55.000 23.65 18.67 34.15 4.79
821 2444 1.182667 CGGATATGCATAGTCGGGGA 58.817 55.000 12.79 0.00 0.00 4.81
881 2504 4.808364 GTCAGTGAAAGTCAGGCATATCTC 59.192 45.833 0.00 0.00 0.00 2.75
883 2506 3.776969 AGTGAAAGTCAGGCATATCTCCA 59.223 43.478 0.00 0.00 0.00 3.86
884 2507 3.873952 GTGAAAGTCAGGCATATCTCCAC 59.126 47.826 0.00 0.00 0.00 4.02
886 2509 1.043816 AGTCAGGCATATCTCCACGG 58.956 55.000 0.00 0.00 0.00 4.94
952 2575 1.966493 GACGTGCATGCCGTTTCGAT 61.966 55.000 27.12 10.16 38.92 3.59
955 2578 0.109781 GTGCATGCCGTTTCGATTGT 60.110 50.000 16.68 0.00 0.00 2.71
1007 2630 7.605410 AAACATCGACGTTTCCACTATAAAT 57.395 32.000 3.34 0.00 33.90 1.40
1075 2698 7.780064 TCCTTCTTAATCTTCTGAGACTGATG 58.220 38.462 0.00 0.00 33.99 3.07
1174 2797 4.097361 GGAAGGGTGGAGGCGGAC 62.097 72.222 0.00 0.00 0.00 4.79
1202 2825 2.124996 CAAGGGTGGAGGGGGAGA 59.875 66.667 0.00 0.00 0.00 3.71
1253 2882 0.114364 GGTGGGAAAGGTGGTGGAAT 59.886 55.000 0.00 0.00 0.00 3.01
1305 2934 4.041762 GGGCACGTTGGGATGGGA 62.042 66.667 0.00 0.00 0.00 4.37
1467 3096 1.753649 TCTACTGCATCAGCTCCTGTC 59.246 52.381 0.00 0.00 42.74 3.51
1562 3191 1.354040 CGTGAGAACAGCCTAGCAAG 58.646 55.000 0.00 0.00 0.00 4.01
1563 3192 1.082690 GTGAGAACAGCCTAGCAAGC 58.917 55.000 0.00 0.00 0.00 4.01
1564 3193 0.979665 TGAGAACAGCCTAGCAAGCT 59.020 50.000 0.00 0.00 42.70 3.74
1565 3194 2.093973 GTGAGAACAGCCTAGCAAGCTA 60.094 50.000 1.37 1.37 38.95 3.32
1566 3195 2.093973 TGAGAACAGCCTAGCAAGCTAC 60.094 50.000 0.00 0.00 38.95 3.58
1567 3196 2.167487 GAGAACAGCCTAGCAAGCTACT 59.833 50.000 0.00 0.00 38.95 2.57
1627 3257 3.607775 GCTAGTAACGCAATGCATGATGG 60.608 47.826 5.91 0.00 0.00 3.51
1629 3259 1.031235 TAACGCAATGCATGATGGGG 58.969 50.000 16.93 10.57 34.14 4.96
1648 3278 1.470098 GGTCGACGCTTGTACCTCTAA 59.530 52.381 9.92 0.00 0.00 2.10
1649 3279 2.098770 GGTCGACGCTTGTACCTCTAAT 59.901 50.000 9.92 0.00 0.00 1.73
1681 3314 8.041919 TGAATGTACGTCCCTGTTAATTAATCA 58.958 33.333 0.31 1.41 0.00 2.57
1686 3319 5.588648 ACGTCCCTGTTAATTAATCATGTGG 59.411 40.000 0.31 3.94 0.00 4.17
1724 3357 6.835174 AGATGCATCTGTAATTCCTATGTGT 58.165 36.000 28.21 0.00 35.42 3.72
1725 3358 7.285566 AGATGCATCTGTAATTCCTATGTGTT 58.714 34.615 28.21 0.00 35.42 3.32
1728 3361 7.334858 TGCATCTGTAATTCCTATGTGTTGTA 58.665 34.615 0.00 0.00 0.00 2.41
1729 3362 7.495606 TGCATCTGTAATTCCTATGTGTTGTAG 59.504 37.037 0.00 0.00 0.00 2.74
1730 3363 7.041780 GCATCTGTAATTCCTATGTGTTGTAGG 60.042 40.741 0.00 0.00 40.08 3.18
1731 3364 7.727578 TCTGTAATTCCTATGTGTTGTAGGA 57.272 36.000 0.00 0.00 44.52 2.94
1824 3487 2.734492 GCGAATGGCTCTGTAACGTACT 60.734 50.000 0.00 0.00 39.11 2.73
1825 3488 3.106672 CGAATGGCTCTGTAACGTACTC 58.893 50.000 0.00 0.00 0.00 2.59
1826 3489 3.445857 GAATGGCTCTGTAACGTACTCC 58.554 50.000 0.00 0.00 0.00 3.85
1827 3490 1.180029 TGGCTCTGTAACGTACTCCC 58.820 55.000 0.00 0.00 0.00 4.30
1828 3491 1.272313 TGGCTCTGTAACGTACTCCCT 60.272 52.381 0.00 0.00 0.00 4.20
1829 3492 1.404748 GGCTCTGTAACGTACTCCCTC 59.595 57.143 0.00 0.00 0.00 4.30
1830 3493 1.404748 GCTCTGTAACGTACTCCCTCC 59.595 57.143 0.00 0.00 0.00 4.30
1831 3494 1.669779 CTCTGTAACGTACTCCCTCCG 59.330 57.143 0.00 0.00 0.00 4.63
1832 3495 1.003580 TCTGTAACGTACTCCCTCCGT 59.996 52.381 0.00 0.00 36.17 4.69
1833 3496 1.815003 CTGTAACGTACTCCCTCCGTT 59.185 52.381 0.00 0.00 45.65 4.44
1834 3497 1.812571 TGTAACGTACTCCCTCCGTTC 59.187 52.381 0.00 0.00 43.09 3.95
1835 3498 1.133216 GTAACGTACTCCCTCCGTTCC 59.867 57.143 0.00 0.00 43.09 3.62
1836 3499 1.589716 AACGTACTCCCTCCGTTCCG 61.590 60.000 0.00 0.00 40.46 4.30
1837 3500 1.746615 CGTACTCCCTCCGTTCCGA 60.747 63.158 0.00 0.00 0.00 4.55
1838 3501 1.308069 CGTACTCCCTCCGTTCCGAA 61.308 60.000 0.00 0.00 0.00 4.30
1839 3502 0.455005 GTACTCCCTCCGTTCCGAAG 59.545 60.000 0.00 0.00 0.00 3.79
1840 3503 0.038744 TACTCCCTCCGTTCCGAAGT 59.961 55.000 0.00 0.00 0.00 3.01
1841 3504 0.830866 ACTCCCTCCGTTCCGAAGTT 60.831 55.000 0.00 0.00 0.00 2.66
1842 3505 0.108756 CTCCCTCCGTTCCGAAGTTC 60.109 60.000 0.00 0.00 0.00 3.01
1843 3506 1.079336 CCCTCCGTTCCGAAGTTCC 60.079 63.158 0.00 0.00 0.00 3.62
1844 3507 1.445582 CCTCCGTTCCGAAGTTCCG 60.446 63.158 0.00 0.00 0.00 4.30
1845 3508 1.582968 CTCCGTTCCGAAGTTCCGA 59.417 57.895 0.00 0.00 0.00 4.55
1846 3509 0.038892 CTCCGTTCCGAAGTTCCGAA 60.039 55.000 2.94 2.94 0.00 4.30
1847 3510 0.604578 TCCGTTCCGAAGTTCCGAAT 59.395 50.000 9.41 0.00 0.00 3.34
1848 3511 1.001181 TCCGTTCCGAAGTTCCGAATT 59.999 47.619 9.41 0.00 0.00 2.17
1849 3512 2.230992 TCCGTTCCGAAGTTCCGAATTA 59.769 45.455 9.41 0.00 0.00 1.40
1850 3513 2.346545 CCGTTCCGAAGTTCCGAATTAC 59.653 50.000 9.41 0.00 0.00 1.89
1851 3514 3.248266 CGTTCCGAAGTTCCGAATTACT 58.752 45.455 9.41 0.00 0.00 2.24
1852 3515 3.676646 CGTTCCGAAGTTCCGAATTACTT 59.323 43.478 9.41 0.00 37.31 2.24
1853 3516 4.201561 CGTTCCGAAGTTCCGAATTACTTC 60.202 45.833 9.41 8.26 44.23 3.01
1854 3517 4.796038 TCCGAAGTTCCGAATTACTTCT 57.204 40.909 14.06 0.00 45.05 2.85
1855 3518 4.741342 TCCGAAGTTCCGAATTACTTCTC 58.259 43.478 14.06 0.00 45.05 2.87
1856 3519 4.461781 TCCGAAGTTCCGAATTACTTCTCT 59.538 41.667 14.06 0.00 45.05 3.10
1857 3520 5.047519 TCCGAAGTTCCGAATTACTTCTCTT 60.048 40.000 14.06 0.83 45.05 2.85
1858 3521 6.151648 TCCGAAGTTCCGAATTACTTCTCTTA 59.848 38.462 14.06 0.00 45.05 2.10
1859 3522 6.472808 CCGAAGTTCCGAATTACTTCTCTTAG 59.527 42.308 14.06 2.29 45.05 2.18
1860 3523 7.249147 CGAAGTTCCGAATTACTTCTCTTAGA 58.751 38.462 14.06 0.00 45.05 2.10
1861 3524 7.916450 CGAAGTTCCGAATTACTTCTCTTAGAT 59.084 37.037 14.06 0.00 45.05 1.98
1864 3527 8.344098 AGTTCCGAATTACTTCTCTTAGATACG 58.656 37.037 0.00 0.00 0.00 3.06
1865 3528 7.199541 TCCGAATTACTTCTCTTAGATACGG 57.800 40.000 0.00 0.00 36.27 4.02
1866 3529 6.994496 TCCGAATTACTTCTCTTAGATACGGA 59.006 38.462 0.00 0.00 40.43 4.69
1867 3530 7.172875 TCCGAATTACTTCTCTTAGATACGGAG 59.827 40.741 0.00 0.00 38.43 4.63
1868 3531 7.299586 CGAATTACTTCTCTTAGATACGGAGG 58.700 42.308 0.00 0.00 0.00 4.30
1869 3532 7.041235 CGAATTACTTCTCTTAGATACGGAGGT 60.041 40.741 0.00 0.00 0.00 3.85
1870 3533 9.282569 GAATTACTTCTCTTAGATACGGAGGTA 57.717 37.037 0.00 0.00 0.00 3.08
1871 3534 9.810870 AATTACTTCTCTTAGATACGGAGGTAT 57.189 33.333 0.00 0.00 42.01 2.73
1879 3542 2.383442 ATACGGAGGTATCTGGCACT 57.617 50.000 0.00 0.00 34.18 4.40
1880 3543 3.520691 ATACGGAGGTATCTGGCACTA 57.479 47.619 0.00 0.00 34.18 2.74
1881 3544 2.154567 ACGGAGGTATCTGGCACTAA 57.845 50.000 0.00 0.00 35.99 2.24
1882 3545 2.463752 ACGGAGGTATCTGGCACTAAA 58.536 47.619 0.00 0.00 35.99 1.85
1883 3546 2.835764 ACGGAGGTATCTGGCACTAAAA 59.164 45.455 0.00 0.00 35.99 1.52
1884 3547 3.454812 ACGGAGGTATCTGGCACTAAAAT 59.545 43.478 0.00 0.00 35.99 1.82
1885 3548 4.652421 ACGGAGGTATCTGGCACTAAAATA 59.348 41.667 0.00 0.00 35.99 1.40
1886 3549 5.129815 ACGGAGGTATCTGGCACTAAAATAA 59.870 40.000 0.00 0.00 35.99 1.40
1887 3550 5.696724 CGGAGGTATCTGGCACTAAAATAAG 59.303 44.000 0.00 0.00 0.00 1.73
1888 3551 6.592870 GGAGGTATCTGGCACTAAAATAAGT 58.407 40.000 0.00 0.00 0.00 2.24
1889 3552 6.706716 GGAGGTATCTGGCACTAAAATAAGTC 59.293 42.308 0.00 0.00 0.00 3.01
1890 3553 7.419172 GGAGGTATCTGGCACTAAAATAAGTCT 60.419 40.741 0.00 0.00 0.00 3.24
1891 3554 8.548880 AGGTATCTGGCACTAAAATAAGTCTA 57.451 34.615 0.00 0.00 0.00 2.59
1892 3555 8.643324 AGGTATCTGGCACTAAAATAAGTCTAG 58.357 37.037 0.00 0.00 0.00 2.43
1893 3556 8.639761 GGTATCTGGCACTAAAATAAGTCTAGA 58.360 37.037 0.00 0.00 0.00 2.43
1897 3560 8.350722 TCTGGCACTAAAATAAGTCTAGATACG 58.649 37.037 0.00 0.00 0.00 3.06
1898 3561 7.431249 TGGCACTAAAATAAGTCTAGATACGG 58.569 38.462 0.00 0.00 0.00 4.02
1899 3562 7.286087 TGGCACTAAAATAAGTCTAGATACGGA 59.714 37.037 0.00 0.00 0.00 4.69
1900 3563 8.305317 GGCACTAAAATAAGTCTAGATACGGAT 58.695 37.037 0.00 0.00 0.00 4.18
1943 3606 9.698309 ATACATTCGTATCTAGACAAATCCAAG 57.302 33.333 0.00 0.00 32.66 3.61
1944 3607 7.782049 ACATTCGTATCTAGACAAATCCAAGA 58.218 34.615 0.00 0.00 0.00 3.02
1945 3608 7.707035 ACATTCGTATCTAGACAAATCCAAGAC 59.293 37.037 0.00 0.00 0.00 3.01
1946 3609 6.769134 TCGTATCTAGACAAATCCAAGACA 57.231 37.500 0.00 0.00 0.00 3.41
1947 3610 7.165460 TCGTATCTAGACAAATCCAAGACAA 57.835 36.000 0.00 0.00 0.00 3.18
1948 3611 7.258441 TCGTATCTAGACAAATCCAAGACAAG 58.742 38.462 0.00 0.00 0.00 3.16
1949 3612 7.036220 CGTATCTAGACAAATCCAAGACAAGT 58.964 38.462 0.00 0.00 0.00 3.16
1950 3613 8.188799 CGTATCTAGACAAATCCAAGACAAGTA 58.811 37.037 0.00 0.00 0.00 2.24
1951 3614 9.303537 GTATCTAGACAAATCCAAGACAAGTAC 57.696 37.037 0.00 0.00 0.00 2.73
1952 3615 7.540474 TCTAGACAAATCCAAGACAAGTACT 57.460 36.000 0.00 0.00 0.00 2.73
1953 3616 7.603651 TCTAGACAAATCCAAGACAAGTACTC 58.396 38.462 0.00 0.00 0.00 2.59
1954 3617 6.426646 AGACAAATCCAAGACAAGTACTCT 57.573 37.500 0.00 0.00 0.00 3.24
1955 3618 6.459923 AGACAAATCCAAGACAAGTACTCTC 58.540 40.000 0.00 0.00 0.00 3.20
1956 3619 6.268847 AGACAAATCCAAGACAAGTACTCTCT 59.731 38.462 0.00 0.00 0.00 3.10
1957 3620 6.459923 ACAAATCCAAGACAAGTACTCTCTC 58.540 40.000 0.00 0.00 0.00 3.20
1958 3621 5.669164 AATCCAAGACAAGTACTCTCTCC 57.331 43.478 0.00 0.00 0.00 3.71
1959 3622 3.082548 TCCAAGACAAGTACTCTCTCCG 58.917 50.000 0.00 0.00 0.00 4.63
1960 3623 2.820787 CCAAGACAAGTACTCTCTCCGT 59.179 50.000 0.00 0.00 0.00 4.69
1961 3624 3.119779 CCAAGACAAGTACTCTCTCCGTC 60.120 52.174 0.00 0.00 0.00 4.79
1962 3625 3.706600 AGACAAGTACTCTCTCCGTCT 57.293 47.619 0.00 0.00 0.00 4.18
1963 3626 3.602483 AGACAAGTACTCTCTCCGTCTC 58.398 50.000 0.00 0.00 29.87 3.36
1964 3627 3.008157 AGACAAGTACTCTCTCCGTCTCA 59.992 47.826 0.00 0.00 29.87 3.27
1965 3628 3.752222 GACAAGTACTCTCTCCGTCTCAA 59.248 47.826 0.00 0.00 0.00 3.02
1966 3629 4.142790 ACAAGTACTCTCTCCGTCTCAAA 58.857 43.478 0.00 0.00 0.00 2.69
1967 3630 4.583489 ACAAGTACTCTCTCCGTCTCAAAA 59.417 41.667 0.00 0.00 0.00 2.44
1968 3631 5.244178 ACAAGTACTCTCTCCGTCTCAAAAT 59.756 40.000 0.00 0.00 0.00 1.82
1969 3632 5.986501 AGTACTCTCTCCGTCTCAAAATT 57.013 39.130 0.00 0.00 0.00 1.82
1970 3633 5.956642 AGTACTCTCTCCGTCTCAAAATTC 58.043 41.667 0.00 0.00 0.00 2.17
1971 3634 5.712917 AGTACTCTCTCCGTCTCAAAATTCT 59.287 40.000 0.00 0.00 0.00 2.40
1972 3635 5.476091 ACTCTCTCCGTCTCAAAATTCTT 57.524 39.130 0.00 0.00 0.00 2.52
1973 3636 5.233988 ACTCTCTCCGTCTCAAAATTCTTG 58.766 41.667 0.00 0.00 0.00 3.02
1974 3637 5.215252 TCTCTCCGTCTCAAAATTCTTGT 57.785 39.130 0.00 0.00 0.00 3.16
1975 3638 5.230942 TCTCTCCGTCTCAAAATTCTTGTC 58.769 41.667 0.00 0.00 0.00 3.18
1976 3639 5.011125 TCTCTCCGTCTCAAAATTCTTGTCT 59.989 40.000 0.00 0.00 0.00 3.41
1977 3640 5.611374 TCTCCGTCTCAAAATTCTTGTCTT 58.389 37.500 0.00 0.00 0.00 3.01
1978 3641 6.755206 TCTCCGTCTCAAAATTCTTGTCTTA 58.245 36.000 0.00 0.00 0.00 2.10
1979 3642 6.868864 TCTCCGTCTCAAAATTCTTGTCTTAG 59.131 38.462 0.00 0.00 0.00 2.18
1980 3643 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
1981 3644 7.386851 TCCGTCTCAAAATTCTTGTCTTAGAT 58.613 34.615 0.00 0.00 0.00 1.98
1982 3645 7.878127 TCCGTCTCAAAATTCTTGTCTTAGATT 59.122 33.333 0.00 0.00 0.00 2.40
1983 3646 8.507249 CCGTCTCAAAATTCTTGTCTTAGATTT 58.493 33.333 0.00 0.00 0.00 2.17
1984 3647 9.322776 CGTCTCAAAATTCTTGTCTTAGATTTG 57.677 33.333 0.00 0.00 30.65 2.32
1993 3656 8.709386 TTCTTGTCTTAGATTTGTCTAGATGC 57.291 34.615 0.00 0.00 0.00 3.91
1994 3657 6.975197 TCTTGTCTTAGATTTGTCTAGATGCG 59.025 38.462 0.00 0.00 0.00 4.73
1995 3658 5.592054 TGTCTTAGATTTGTCTAGATGCGG 58.408 41.667 0.00 0.00 0.00 5.69
1996 3659 5.359860 TGTCTTAGATTTGTCTAGATGCGGA 59.640 40.000 0.00 0.00 0.00 5.54
1997 3660 6.040955 TGTCTTAGATTTGTCTAGATGCGGAT 59.959 38.462 0.00 0.00 0.00 4.18
1998 3661 7.230712 TGTCTTAGATTTGTCTAGATGCGGATA 59.769 37.037 0.00 0.00 0.00 2.59
1999 3662 8.247562 GTCTTAGATTTGTCTAGATGCGGATAT 58.752 37.037 0.00 0.00 0.00 1.63
2000 3663 9.462606 TCTTAGATTTGTCTAGATGCGGATATA 57.537 33.333 0.00 0.00 0.00 0.86
2003 3666 8.532186 AGATTTGTCTAGATGCGGATATATCT 57.468 34.615 12.42 0.00 37.42 1.98
2004 3667 9.634021 AGATTTGTCTAGATGCGGATATATCTA 57.366 33.333 12.42 0.72 35.42 1.98
2081 3744 4.561500 TGGGACAAATGGAGTAATTCGA 57.438 40.909 0.00 0.00 31.92 3.71
2082 3745 4.912586 TGGGACAAATGGAGTAATTCGAA 58.087 39.130 0.00 0.00 31.92 3.71
2083 3746 5.317808 TGGGACAAATGGAGTAATTCGAAA 58.682 37.500 0.00 0.00 31.92 3.46
2084 3747 5.182380 TGGGACAAATGGAGTAATTCGAAAC 59.818 40.000 0.00 0.00 31.92 2.78
2085 3748 5.321516 GGACAAATGGAGTAATTCGAAACG 58.678 41.667 0.00 0.00 0.00 3.60
2086 3749 5.291293 ACAAATGGAGTAATTCGAAACGG 57.709 39.130 0.00 0.00 0.00 4.44
2087 3750 4.998672 ACAAATGGAGTAATTCGAAACGGA 59.001 37.500 0.00 0.00 0.00 4.69
2088 3751 5.121768 ACAAATGGAGTAATTCGAAACGGAG 59.878 40.000 0.00 0.00 0.00 4.63
2089 3752 3.241067 TGGAGTAATTCGAAACGGAGG 57.759 47.619 0.00 0.00 0.00 4.30
2090 3753 2.093869 TGGAGTAATTCGAAACGGAGGG 60.094 50.000 0.00 0.00 0.00 4.30
2091 3754 2.167075 GGAGTAATTCGAAACGGAGGGA 59.833 50.000 0.00 0.00 0.00 4.20
2092 3755 3.445857 GAGTAATTCGAAACGGAGGGAG 58.554 50.000 0.00 0.00 0.00 4.30
2093 3756 2.830321 AGTAATTCGAAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
2094 3757 4.019174 AGTAATTCGAAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
2095 3758 2.955477 ATTCGAAACGGAGGGAGTAC 57.045 50.000 0.00 0.00 0.00 2.73
2096 3759 0.523072 TTCGAAACGGAGGGAGTACG 59.477 55.000 0.00 0.00 0.00 3.67
2097 3760 0.606401 TCGAAACGGAGGGAGTACGT 60.606 55.000 0.00 0.00 43.43 3.57
2098 3761 1.086696 CGAAACGGAGGGAGTACGTA 58.913 55.000 0.00 0.00 40.31 3.57
2099 3762 1.202076 CGAAACGGAGGGAGTACGTAC 60.202 57.143 18.10 18.10 40.31 3.67
2100 3763 0.804989 AAACGGAGGGAGTACGTACG 59.195 55.000 19.49 15.01 46.37 3.67
2101 3764 4.208632 CGGAGGGAGTACGTACGT 57.791 61.111 25.98 25.98 36.57 3.57
2102 3765 1.717937 CGGAGGGAGTACGTACGTG 59.282 63.158 30.25 6.68 36.57 4.49
2103 3766 1.021390 CGGAGGGAGTACGTACGTGT 61.021 60.000 30.25 17.45 36.57 4.49
2115 3778 7.325599 AGTACGTACGTGTGTAAATTTTCTC 57.674 36.000 30.25 0.00 30.94 2.87
2135 3798 0.796870 TGCGAATGACGTGCGTCTAG 60.797 55.000 22.54 13.13 44.80 2.43
2208 3891 1.452470 ACGAACGGGTTGCTGGTTT 60.452 52.632 0.00 0.00 0.00 3.27
2214 3897 2.227194 ACGGGTTGCTGGTTTTTCTAG 58.773 47.619 0.00 0.00 0.00 2.43
2262 3945 7.115378 CCAAAAATTCTGTTGTTATGAGCACTC 59.885 37.037 0.00 0.00 0.00 3.51
2289 3972 1.272781 GAGAGAGTCGCGGTCAAATG 58.727 55.000 6.13 0.00 0.00 2.32
2307 3990 3.598019 ATGGCAGTTTTGAAATCGCAT 57.402 38.095 0.00 0.00 0.00 4.73
2359 4042 1.133407 GTGTTCTTCGTTGTTTGGCCA 59.867 47.619 0.00 0.00 0.00 5.36
2361 4044 1.404035 GTTCTTCGTTGTTTGGCCAGT 59.596 47.619 5.11 0.00 0.00 4.00
2377 4060 2.239907 GCCAGTGTAATTCTCCCTCCTT 59.760 50.000 0.00 0.00 0.00 3.36
2380 4063 3.519510 CAGTGTAATTCTCCCTCCTTGGA 59.480 47.826 0.00 0.00 38.35 3.53
2434 4117 5.747951 TTGGTTTGATGTCAAAAATTGGC 57.252 34.783 9.55 0.00 46.08 4.52
2440 4123 2.924757 TGTCAAAAATTGGCATGCCA 57.075 40.000 35.59 35.59 40.96 4.92
2450 4133 1.264295 TGGCATGCCAATGTTTAGCA 58.736 45.000 36.95 9.68 44.12 3.49
2452 4135 2.159071 TGGCATGCCAATGTTTAGCATC 60.159 45.455 36.95 5.36 45.16 3.91
2453 4136 2.121786 GCATGCCAATGTTTAGCATCG 58.878 47.619 6.36 0.00 45.16 3.84
2454 4137 2.734670 CATGCCAATGTTTAGCATCGG 58.265 47.619 0.00 0.00 45.16 4.18
2455 4138 1.102154 TGCCAATGTTTAGCATCGGG 58.898 50.000 0.00 0.00 36.67 5.14
2456 4139 1.102978 GCCAATGTTTAGCATCGGGT 58.897 50.000 0.00 0.00 36.67 5.28
2457 4140 1.065551 GCCAATGTTTAGCATCGGGTC 59.934 52.381 0.00 0.00 36.67 4.46
2458 4141 2.364632 CCAATGTTTAGCATCGGGTCA 58.635 47.619 0.00 0.00 36.67 4.02
2459 4142 2.752354 CCAATGTTTAGCATCGGGTCAA 59.248 45.455 0.00 0.00 36.67 3.18
2460 4143 3.192422 CCAATGTTTAGCATCGGGTCAAA 59.808 43.478 0.00 0.00 36.67 2.69
2461 4144 4.142182 CCAATGTTTAGCATCGGGTCAAAT 60.142 41.667 0.00 0.00 36.67 2.32
2462 4145 5.067153 CCAATGTTTAGCATCGGGTCAAATA 59.933 40.000 0.00 0.00 36.67 1.40
2463 4146 6.239008 CCAATGTTTAGCATCGGGTCAAATAT 60.239 38.462 0.00 0.00 36.67 1.28
2464 4147 6.959639 ATGTTTAGCATCGGGTCAAATATT 57.040 33.333 0.00 0.00 30.67 1.28
2465 4148 6.130298 TGTTTAGCATCGGGTCAAATATTG 57.870 37.500 0.00 0.00 0.00 1.90
2466 4149 5.883115 TGTTTAGCATCGGGTCAAATATTGA 59.117 36.000 0.00 0.00 37.33 2.57
2467 4150 7.468631 ATGTTTAGCATCGGGTCAAATATTGAC 60.469 37.037 13.45 13.45 45.64 3.18
2505 4188 9.942850 TGTTATCAAATTGTCTTGTCTATCTCA 57.057 29.630 0.00 0.00 0.00 3.27
2515 4198 9.634021 TTGTCTTGTCTATCTCATATAGTCACT 57.366 33.333 0.00 0.00 0.00 3.41
2529 4212 9.132923 TCATATAGTCACTAGTAGAAAACAGGG 57.867 37.037 3.59 0.00 0.00 4.45
2530 4213 4.538746 AGTCACTAGTAGAAAACAGGGC 57.461 45.455 3.59 0.00 0.00 5.19
2531 4214 4.161102 AGTCACTAGTAGAAAACAGGGCT 58.839 43.478 3.59 0.00 0.00 5.19
2532 4215 4.593634 AGTCACTAGTAGAAAACAGGGCTT 59.406 41.667 3.59 0.00 0.00 4.35
2533 4216 5.071923 AGTCACTAGTAGAAAACAGGGCTTT 59.928 40.000 3.59 0.00 0.00 3.51
2534 4217 5.179555 GTCACTAGTAGAAAACAGGGCTTTG 59.820 44.000 3.59 0.00 0.00 2.77
2535 4218 4.455877 CACTAGTAGAAAACAGGGCTTTGG 59.544 45.833 3.59 0.00 0.00 3.28
2536 4219 3.595190 AGTAGAAAACAGGGCTTTGGT 57.405 42.857 0.00 0.00 0.00 3.67
2537 4220 3.487372 AGTAGAAAACAGGGCTTTGGTC 58.513 45.455 0.00 0.00 0.00 4.02
2538 4221 1.704641 AGAAAACAGGGCTTTGGTCC 58.295 50.000 0.00 0.00 37.52 4.46
2539 4222 1.063266 AGAAAACAGGGCTTTGGTCCA 60.063 47.619 0.00 0.00 40.27 4.02
2540 4223 1.341209 GAAAACAGGGCTTTGGTCCAG 59.659 52.381 0.00 0.00 40.27 3.86
2541 4224 0.469892 AAACAGGGCTTTGGTCCAGG 60.470 55.000 0.00 0.00 40.27 4.45
2542 4225 2.677875 CAGGGCTTTGGTCCAGGC 60.678 66.667 9.58 9.58 40.27 4.85
2547 4230 3.966543 CTTTGGTCCAGGCCGGGT 61.967 66.667 22.25 0.00 34.36 5.28
2548 4231 3.920093 CTTTGGTCCAGGCCGGGTC 62.920 68.421 22.25 16.31 34.36 4.46
2563 4246 1.146263 GGTCAGCCCATTAGTCCCG 59.854 63.158 0.00 0.00 0.00 5.14
2564 4247 1.146263 GTCAGCCCATTAGTCCCGG 59.854 63.158 0.00 0.00 0.00 5.73
2565 4248 1.306654 TCAGCCCATTAGTCCCGGT 60.307 57.895 0.00 0.00 0.00 5.28
2566 4249 0.912487 TCAGCCCATTAGTCCCGGTT 60.912 55.000 0.00 0.00 0.00 4.44
2567 4250 0.463833 CAGCCCATTAGTCCCGGTTC 60.464 60.000 0.00 0.00 0.00 3.62
2568 4251 0.912487 AGCCCATTAGTCCCGGTTCA 60.912 55.000 0.00 0.00 0.00 3.18
2569 4252 0.463833 GCCCATTAGTCCCGGTTCAG 60.464 60.000 0.00 0.00 0.00 3.02
2570 4253 0.909623 CCCATTAGTCCCGGTTCAGT 59.090 55.000 0.00 0.00 0.00 3.41
2571 4254 1.134491 CCCATTAGTCCCGGTTCAGTC 60.134 57.143 0.00 0.00 0.00 3.51
2572 4255 1.134491 CCATTAGTCCCGGTTCAGTCC 60.134 57.143 0.00 0.00 0.00 3.85
2573 4256 1.553248 CATTAGTCCCGGTTCAGTCCA 59.447 52.381 0.00 0.00 0.00 4.02
2574 4257 1.263356 TTAGTCCCGGTTCAGTCCAG 58.737 55.000 0.00 0.00 0.00 3.86
2575 4258 0.406750 TAGTCCCGGTTCAGTCCAGA 59.593 55.000 0.00 0.00 0.00 3.86
2576 4259 0.471211 AGTCCCGGTTCAGTCCAGAA 60.471 55.000 0.00 0.00 0.00 3.02
2577 4260 0.320508 GTCCCGGTTCAGTCCAGAAC 60.321 60.000 0.00 0.00 45.50 3.01
2581 4264 4.695560 GTTCAGTCCAGAACCGGG 57.304 61.111 6.32 0.00 41.52 5.73
2582 4265 2.055299 GTTCAGTCCAGAACCGGGA 58.945 57.895 6.32 0.00 41.52 5.14
2587 4270 4.243550 TCCAGAACCGGGACCAAT 57.756 55.556 6.32 0.00 0.00 3.16
2588 4271 1.682849 TCCAGAACCGGGACCAATG 59.317 57.895 6.32 0.00 0.00 2.82
2589 4272 1.131303 TCCAGAACCGGGACCAATGT 61.131 55.000 6.32 0.00 0.00 2.71
2590 4273 0.251165 CCAGAACCGGGACCAATGTT 60.251 55.000 6.32 0.00 0.00 2.71
2591 4274 0.881118 CAGAACCGGGACCAATGTTG 59.119 55.000 6.32 0.00 0.00 3.33
2604 4287 0.607620 AATGTTGGCATTGGTTCCGG 59.392 50.000 0.00 0.00 43.12 5.14
2605 4288 0.541764 ATGTTGGCATTGGTTCCGGT 60.542 50.000 0.00 0.00 29.54 5.28
2606 4289 0.757188 TGTTGGCATTGGTTCCGGTT 60.757 50.000 0.00 0.00 0.00 4.44
2607 4290 0.038618 GTTGGCATTGGTTCCGGTTC 60.039 55.000 0.00 0.00 0.00 3.62
2608 4291 1.519751 TTGGCATTGGTTCCGGTTCG 61.520 55.000 0.00 0.00 0.00 3.95
2609 4292 1.969589 GGCATTGGTTCCGGTTCGT 60.970 57.895 0.00 0.00 0.00 3.85
2610 4293 1.209127 GCATTGGTTCCGGTTCGTG 59.791 57.895 0.00 0.00 0.00 4.35
2611 4294 1.231958 GCATTGGTTCCGGTTCGTGA 61.232 55.000 0.00 0.00 0.00 4.35
2612 4295 1.231221 CATTGGTTCCGGTTCGTGAA 58.769 50.000 0.00 0.00 0.00 3.18
2613 4296 1.069500 CATTGGTTCCGGTTCGTGAAC 60.069 52.381 0.00 4.15 40.45 3.18
2621 4304 3.153825 GTTCGTGAACCCAGGGGA 58.846 61.111 11.37 0.00 38.96 4.81
2622 4305 1.302271 GTTCGTGAACCCAGGGGAC 60.302 63.158 11.37 3.65 38.96 4.46
2623 4306 2.743126 GTTCGTGAACCCAGGGGACC 62.743 65.000 11.37 2.63 41.81 4.46
2647 4330 3.747976 GCACGTGGGCCATTGGTC 61.748 66.667 18.88 0.54 0.00 4.02
2653 4336 4.376170 GGGCCATTGGTCCCGGTT 62.376 66.667 15.98 0.00 42.67 4.44
2654 4337 2.754254 GGCCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 0.00 3.62
2655 4338 2.034999 GCCATTGGTCCCGGTTCA 59.965 61.111 0.00 0.00 0.00 3.18
2656 4339 1.379843 GCCATTGGTCCCGGTTCAT 60.380 57.895 0.00 0.00 0.00 2.57
2657 4340 1.384222 GCCATTGGTCCCGGTTCATC 61.384 60.000 0.00 0.00 0.00 2.92
2658 4341 0.255890 CCATTGGTCCCGGTTCATCT 59.744 55.000 0.00 0.00 0.00 2.90
2659 4342 1.382522 CATTGGTCCCGGTTCATCTG 58.617 55.000 0.00 0.00 0.00 2.90
2660 4343 0.255890 ATTGGTCCCGGTTCATCTGG 59.744 55.000 0.00 0.00 42.06 3.86
2661 4344 0.838554 TTGGTCCCGGTTCATCTGGA 60.839 55.000 0.00 0.00 45.09 3.86
2662 4345 1.221021 GGTCCCGGTTCATCTGGAC 59.779 63.158 0.00 0.00 45.09 4.02
2663 4346 1.221021 GTCCCGGTTCATCTGGACC 59.779 63.158 0.00 0.00 45.09 4.46
2664 4347 1.080354 TCCCGGTTCATCTGGACCT 59.920 57.895 0.00 0.00 45.09 3.85
2665 4348 0.546747 TCCCGGTTCATCTGGACCTT 60.547 55.000 0.00 0.00 45.09 3.50
2666 4349 0.328258 CCCGGTTCATCTGGACCTTT 59.672 55.000 0.00 0.00 45.09 3.11
2667 4350 1.271926 CCCGGTTCATCTGGACCTTTT 60.272 52.381 0.00 0.00 45.09 2.27
2668 4351 1.812571 CCGGTTCATCTGGACCTTTTG 59.187 52.381 6.11 0.00 45.09 2.44
2669 4352 3.458287 CCGGTTCATCTGGACCTTTTGG 61.458 54.545 6.11 0.00 45.09 3.28
2679 4362 3.771978 CCTTTTGGTCCCGGTTGG 58.228 61.111 0.00 0.00 34.07 3.77
2680 4363 1.152631 CCTTTTGGTCCCGGTTGGT 60.153 57.895 0.00 0.00 34.77 3.67
2681 4364 1.460273 CCTTTTGGTCCCGGTTGGTG 61.460 60.000 0.00 0.00 34.77 4.17
2682 4365 1.455959 TTTTGGTCCCGGTTGGTGG 60.456 57.895 0.00 0.00 34.77 4.61
2690 4373 2.876581 CCGGTTGGTGGGATAAACC 58.123 57.895 0.00 0.00 40.02 3.27
2692 4375 2.876581 GGTTGGTGGGATAAACCGG 58.123 57.895 0.00 0.00 40.86 5.28
2693 4376 0.681887 GGTTGGTGGGATAAACCGGG 60.682 60.000 6.32 0.00 40.86 5.73
2694 4377 0.328926 GTTGGTGGGATAAACCGGGA 59.671 55.000 6.32 0.00 40.86 5.14
2695 4378 0.328926 TTGGTGGGATAAACCGGGAC 59.671 55.000 6.32 0.00 40.86 4.46
2696 4379 1.225426 GGTGGGATAAACCGGGACC 59.775 63.158 6.32 0.94 40.11 4.46
2697 4380 1.564483 GGTGGGATAAACCGGGACCA 61.564 60.000 6.32 1.29 40.11 4.02
2698 4381 0.328926 GTGGGATAAACCGGGACCAA 59.671 55.000 6.32 0.00 40.11 3.67
2699 4382 1.064240 GTGGGATAAACCGGGACCAAT 60.064 52.381 6.32 0.00 40.11 3.16
2700 4383 1.064314 TGGGATAAACCGGGACCAATG 60.064 52.381 6.32 0.00 40.11 2.82
2701 4384 1.029681 GGATAAACCGGGACCAATGC 58.970 55.000 6.32 0.00 0.00 3.56
2702 4385 0.661020 GATAAACCGGGACCAATGCG 59.339 55.000 6.32 0.00 0.00 4.73
2703 4386 1.381165 ATAAACCGGGACCAATGCGC 61.381 55.000 6.32 0.00 0.00 6.09
2719 4402 4.228567 GCCTCGCTCCTGGCCTAC 62.229 72.222 3.32 0.00 43.11 3.18
2720 4403 3.541713 CCTCGCTCCTGGCCTACC 61.542 72.222 3.32 0.00 37.74 3.18
2721 4404 2.759973 CTCGCTCCTGGCCTACCA 60.760 66.667 3.32 0.00 46.51 3.25
2722 4405 3.075005 TCGCTCCTGGCCTACCAC 61.075 66.667 3.32 0.00 42.67 4.16
2723 4406 4.162690 CGCTCCTGGCCTACCACC 62.163 72.222 3.32 0.00 42.67 4.61
2724 4407 3.009115 GCTCCTGGCCTACCACCA 61.009 66.667 3.32 0.00 42.67 4.17
2725 4408 2.378634 GCTCCTGGCCTACCACCAT 61.379 63.158 3.32 0.00 42.67 3.55
2726 4409 1.926426 GCTCCTGGCCTACCACCATT 61.926 60.000 3.32 0.00 42.67 3.16
2727 4410 0.107017 CTCCTGGCCTACCACCATTG 60.107 60.000 3.32 0.00 42.67 2.82
2736 4419 2.438795 CCACCATTGGTCCCGGTT 59.561 61.111 5.04 0.00 38.23 4.44
2737 4420 1.976474 CCACCATTGGTCCCGGTTG 60.976 63.158 5.04 0.00 38.23 3.77
2738 4421 1.976474 CACCATTGGTCCCGGTTGG 60.976 63.158 5.04 0.00 31.02 3.77
2739 4422 2.438795 CCATTGGTCCCGGTTGGT 59.561 61.111 0.00 0.00 34.77 3.67
2740 4423 1.976474 CCATTGGTCCCGGTTGGTG 60.976 63.158 0.00 0.00 34.77 4.17
2741 4424 1.976474 CATTGGTCCCGGTTGGTGG 60.976 63.158 0.00 0.00 34.77 4.61
2742 4425 3.879180 ATTGGTCCCGGTTGGTGGC 62.879 63.158 0.00 0.00 34.77 5.01
2744 4427 4.280019 GGTCCCGGTTGGTGGCTT 62.280 66.667 0.00 0.00 34.77 4.35
2745 4428 2.983592 GTCCCGGTTGGTGGCTTG 60.984 66.667 0.00 0.00 34.77 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.010415 GCCCGGATAGTTACACTACAGTAAT 59.990 44.000 0.73 0.00 36.47 1.89
1 2 4.339247 GCCCGGATAGTTACACTACAGTAA 59.661 45.833 0.73 0.00 32.84 2.24
2 3 3.885297 GCCCGGATAGTTACACTACAGTA 59.115 47.826 0.73 0.00 32.84 2.74
3 4 2.692041 GCCCGGATAGTTACACTACAGT 59.308 50.000 0.73 0.00 32.84 3.55
4 5 2.287427 CGCCCGGATAGTTACACTACAG 60.287 54.545 0.73 0.00 32.84 2.74
5 6 1.677576 CGCCCGGATAGTTACACTACA 59.322 52.381 0.73 0.00 32.84 2.74
6 7 1.678101 ACGCCCGGATAGTTACACTAC 59.322 52.381 0.73 0.00 32.84 2.73
7 8 1.949525 GACGCCCGGATAGTTACACTA 59.050 52.381 0.73 0.00 34.82 2.74
8 9 0.743097 GACGCCCGGATAGTTACACT 59.257 55.000 0.73 0.00 0.00 3.55
9 10 0.457035 TGACGCCCGGATAGTTACAC 59.543 55.000 0.73 0.00 0.00 2.90
10 11 0.457035 GTGACGCCCGGATAGTTACA 59.543 55.000 0.73 0.00 0.00 2.41
11 12 0.457035 TGTGACGCCCGGATAGTTAC 59.543 55.000 0.73 7.44 0.00 2.50
12 13 1.338973 GATGTGACGCCCGGATAGTTA 59.661 52.381 0.73 0.00 0.00 2.24
13 14 0.104304 GATGTGACGCCCGGATAGTT 59.896 55.000 0.73 0.00 0.00 2.24
14 15 0.755698 AGATGTGACGCCCGGATAGT 60.756 55.000 0.73 0.00 0.00 2.12
15 16 0.319040 CAGATGTGACGCCCGGATAG 60.319 60.000 0.73 0.00 0.00 2.08
16 17 1.040893 ACAGATGTGACGCCCGGATA 61.041 55.000 0.73 0.00 0.00 2.59
17 18 1.040893 TACAGATGTGACGCCCGGAT 61.041 55.000 0.73 0.00 0.00 4.18
18 19 1.663379 CTACAGATGTGACGCCCGGA 61.663 60.000 0.73 0.00 0.00 5.14
19 20 1.226974 CTACAGATGTGACGCCCGG 60.227 63.158 0.00 0.00 0.00 5.73
20 21 0.172578 TTCTACAGATGTGACGCCCG 59.827 55.000 0.00 0.00 0.00 6.13
21 22 2.604046 ATTCTACAGATGTGACGCCC 57.396 50.000 0.00 0.00 0.00 6.13
22 23 6.037172 ACAAATTATTCTACAGATGTGACGCC 59.963 38.462 0.00 0.00 0.00 5.68
23 24 7.005062 ACAAATTATTCTACAGATGTGACGC 57.995 36.000 0.00 0.00 0.00 5.19
51 52 9.357161 TGCCCGGATAGTTATTAAACAATTTAT 57.643 29.630 0.73 0.00 38.12 1.40
52 53 8.749026 TGCCCGGATAGTTATTAAACAATTTA 57.251 30.769 0.73 0.00 38.12 1.40
53 54 7.648039 TGCCCGGATAGTTATTAAACAATTT 57.352 32.000 0.73 0.00 38.12 1.82
54 55 7.833285 ATGCCCGGATAGTTATTAAACAATT 57.167 32.000 0.73 0.00 38.12 2.32
55 56 7.504238 TCAATGCCCGGATAGTTATTAAACAAT 59.496 33.333 0.73 0.00 38.12 2.71
56 57 6.829298 TCAATGCCCGGATAGTTATTAAACAA 59.171 34.615 0.73 0.00 38.12 2.83
57 58 6.358178 TCAATGCCCGGATAGTTATTAAACA 58.642 36.000 0.73 0.00 38.12 2.83
58 59 6.870971 TCAATGCCCGGATAGTTATTAAAC 57.129 37.500 0.73 0.00 35.72 2.01
59 60 6.829298 TGTTCAATGCCCGGATAGTTATTAAA 59.171 34.615 0.73 0.00 0.00 1.52
60 61 6.261381 GTGTTCAATGCCCGGATAGTTATTAA 59.739 38.462 0.73 0.00 0.00 1.40
61 62 5.761234 GTGTTCAATGCCCGGATAGTTATTA 59.239 40.000 0.73 0.00 0.00 0.98
62 63 4.578928 GTGTTCAATGCCCGGATAGTTATT 59.421 41.667 0.73 0.00 0.00 1.40
63 64 4.134563 GTGTTCAATGCCCGGATAGTTAT 58.865 43.478 0.73 0.00 0.00 1.89
64 65 3.199071 AGTGTTCAATGCCCGGATAGTTA 59.801 43.478 0.73 0.00 0.00 2.24
65 66 2.026262 AGTGTTCAATGCCCGGATAGTT 60.026 45.455 0.73 0.00 0.00 2.24
66 67 1.559682 AGTGTTCAATGCCCGGATAGT 59.440 47.619 0.73 0.00 0.00 2.12
67 68 2.332063 AGTGTTCAATGCCCGGATAG 57.668 50.000 0.73 0.00 0.00 2.08
68 69 2.799126 AAGTGTTCAATGCCCGGATA 57.201 45.000 0.73 0.00 0.00 2.59
69 70 1.923356 AAAGTGTTCAATGCCCGGAT 58.077 45.000 0.73 0.00 0.00 4.18
70 71 1.698506 AAAAGTGTTCAATGCCCGGA 58.301 45.000 0.73 0.00 0.00 5.14
71 72 2.524569 AAAAAGTGTTCAATGCCCGG 57.475 45.000 0.00 0.00 0.00 5.73
72 73 3.971150 TGTAAAAAGTGTTCAATGCCCG 58.029 40.909 0.00 0.00 0.00 6.13
73 74 6.926272 TGTAATGTAAAAAGTGTTCAATGCCC 59.074 34.615 0.00 0.00 0.00 5.36
74 75 7.938563 TGTAATGTAAAAAGTGTTCAATGCC 57.061 32.000 0.00 0.00 0.00 4.40
279 1674 9.341899 GCTCGTTGATGTAAATGTTTAAAGAAT 57.658 29.630 0.00 0.00 0.00 2.40
286 1681 4.024387 ACACGCTCGTTGATGTAAATGTTT 60.024 37.500 0.00 0.00 0.00 2.83
292 1687 1.333115 CGACACGCTCGTTGATGTAA 58.667 50.000 0.00 0.00 37.64 2.41
305 1700 1.007336 GTACTCAAGCCACCGACACG 61.007 60.000 0.00 0.00 0.00 4.49
358 1753 9.624697 GTAAATTCTAAAACATGTGCTGAATGA 57.375 29.630 0.00 0.00 0.00 2.57
363 1758 8.969121 TGATGTAAATTCTAAAACATGTGCTG 57.031 30.769 0.00 0.00 32.87 4.41
365 1760 7.541783 TGCTGATGTAAATTCTAAAACATGTGC 59.458 33.333 0.00 0.00 32.87 4.57
380 1776 7.495279 GGCCATTTTTCATATTGCTGATGTAAA 59.505 33.333 0.00 0.00 0.00 2.01
387 1783 5.411977 TGTTTGGCCATTTTTCATATTGCTG 59.588 36.000 6.09 0.00 0.00 4.41
389 1785 5.876612 TGTTTGGCCATTTTTCATATTGC 57.123 34.783 6.09 0.00 0.00 3.56
427 1825 9.593134 TTGCACATGTATCTTTTTAAAGTGTTT 57.407 25.926 0.00 0.00 37.31 2.83
457 2079 1.134367 CCAGCCATTCATGTGCTTCTG 59.866 52.381 0.00 0.00 33.87 3.02
542 2164 8.899887 TTTCTCCCAAATCCAGAAAAGATATT 57.100 30.769 0.00 0.00 34.04 1.28
590 2212 4.416601 AGCTAGGGGACGGGGCTT 62.417 66.667 0.00 0.00 32.30 4.35
598 2220 0.621571 ATTGAGTGGCAGCTAGGGGA 60.622 55.000 0.00 0.00 0.00 4.81
682 2305 2.614829 ATGCCGCTACGTAATCCTTT 57.385 45.000 0.00 0.00 0.00 3.11
687 2310 1.411246 TCCAGAATGCCGCTACGTAAT 59.589 47.619 0.00 0.00 31.97 1.89
689 2312 0.101759 GTCCAGAATGCCGCTACGTA 59.898 55.000 0.00 0.00 31.97 3.57
719 2342 2.613977 CCGTTGCTCTCTTGTCAAGGAT 60.614 50.000 12.66 0.00 0.00 3.24
720 2343 1.270305 CCGTTGCTCTCTTGTCAAGGA 60.270 52.381 12.66 7.92 0.00 3.36
721 2344 1.151668 CCGTTGCTCTCTTGTCAAGG 58.848 55.000 12.66 4.01 0.00 3.61
722 2345 1.871080 ACCGTTGCTCTCTTGTCAAG 58.129 50.000 6.21 6.21 0.00 3.02
723 2346 2.325583 AACCGTTGCTCTCTTGTCAA 57.674 45.000 0.00 0.00 0.00 3.18
724 2347 2.866460 GCTAACCGTTGCTCTCTTGTCA 60.866 50.000 0.00 0.00 0.00 3.58
725 2348 1.727335 GCTAACCGTTGCTCTCTTGTC 59.273 52.381 0.00 0.00 0.00 3.18
726 2349 1.797025 GCTAACCGTTGCTCTCTTGT 58.203 50.000 0.00 0.00 0.00 3.16
727 2350 0.716108 CGCTAACCGTTGCTCTCTTG 59.284 55.000 0.00 0.00 0.00 3.02
728 2351 3.123674 CGCTAACCGTTGCTCTCTT 57.876 52.632 0.00 0.00 0.00 2.85
729 2352 4.891566 CGCTAACCGTTGCTCTCT 57.108 55.556 0.00 0.00 0.00 3.10
744 2367 2.131183 CAAAGCTGCCTAGAGATACGC 58.869 52.381 0.00 0.00 0.00 4.42
746 2369 5.017294 AGAACAAAGCTGCCTAGAGATAC 57.983 43.478 0.00 0.00 0.00 2.24
747 2370 5.683876 AAGAACAAAGCTGCCTAGAGATA 57.316 39.130 0.00 0.00 0.00 1.98
748 2371 4.566426 AAGAACAAAGCTGCCTAGAGAT 57.434 40.909 0.00 0.00 0.00 2.75
749 2372 5.483685 TTAAGAACAAAGCTGCCTAGAGA 57.516 39.130 0.00 0.00 0.00 3.10
750 2373 6.560253 TTTTAAGAACAAAGCTGCCTAGAG 57.440 37.500 0.00 0.00 0.00 2.43
751 2374 6.952773 TTTTTAAGAACAAAGCTGCCTAGA 57.047 33.333 0.00 0.00 0.00 2.43
814 2437 0.179108 CTCACCTCGAAATCCCCGAC 60.179 60.000 0.00 0.00 32.18 4.79
818 2441 0.827368 AGAGCTCACCTCGAAATCCC 59.173 55.000 17.77 0.00 45.54 3.85
821 2444 0.457851 CGGAGAGCTCACCTCGAAAT 59.542 55.000 25.15 0.00 45.54 2.17
850 2473 1.738099 CTTTCACTGACTCCGGCCG 60.738 63.158 21.04 21.04 0.00 6.13
930 2553 2.811893 GAAACGGCATGCACGTCGAC 62.812 60.000 26.76 18.78 44.83 4.20
931 2554 2.663478 GAAACGGCATGCACGTCGA 61.663 57.895 26.76 0.00 44.83 4.20
932 2555 2.202171 GAAACGGCATGCACGTCG 60.202 61.111 26.76 19.97 44.83 5.12
933 2556 1.966493 ATCGAAACGGCATGCACGTC 61.966 55.000 26.76 17.53 44.83 4.34
980 2603 2.727798 AGTGGAAACGTCGATGTTTACG 59.272 45.455 30.73 14.43 44.10 3.18
1049 2672 7.403312 TCAGTCTCAGAAGATTAAGAAGGAG 57.597 40.000 0.00 0.00 33.08 3.69
1191 2814 2.705410 CCTCCATCTCCCCCTCCA 59.295 66.667 0.00 0.00 0.00 3.86
1233 2862 0.996762 TTCCACCACCTTTCCCACCT 60.997 55.000 0.00 0.00 0.00 4.00
1234 2863 0.114364 ATTCCACCACCTTTCCCACC 59.886 55.000 0.00 0.00 0.00 4.61
1235 2864 1.545841 GATTCCACCACCTTTCCCAC 58.454 55.000 0.00 0.00 0.00 4.61
1239 2868 1.679032 CCTCCGATTCCACCACCTTTC 60.679 57.143 0.00 0.00 0.00 2.62
1253 2882 3.539593 TTGGCAGACCCTCCTCCGA 62.540 63.158 0.00 0.00 33.59 4.55
1428 3057 2.202756 CGTCTCTACTTGGCGGCC 60.203 66.667 13.32 13.32 0.00 6.13
1627 3257 1.153881 GAGGTACAAGCGTCGACCC 60.154 63.158 10.58 0.00 31.93 4.46
1629 3259 2.907910 TTAGAGGTACAAGCGTCGAC 57.092 50.000 5.18 5.18 0.00 4.20
1648 3278 6.726490 ACAGGGACGTACATTCACTTATAT 57.274 37.500 0.00 0.00 0.00 0.86
1649 3279 6.534475 AACAGGGACGTACATTCACTTATA 57.466 37.500 0.00 0.00 0.00 0.98
1681 3314 0.105760 TGGAAAACCAGCACCCACAT 60.106 50.000 0.00 0.00 0.00 3.21
1686 3319 0.244721 GCATCTGGAAAACCAGCACC 59.755 55.000 10.93 0.00 37.69 5.01
1717 3350 5.008712 TGCGAGATACTCCTACAACACATAG 59.991 44.000 0.00 0.00 0.00 2.23
1718 3351 4.885325 TGCGAGATACTCCTACAACACATA 59.115 41.667 0.00 0.00 0.00 2.29
1719 3352 3.699538 TGCGAGATACTCCTACAACACAT 59.300 43.478 0.00 0.00 0.00 3.21
1720 3353 3.086282 TGCGAGATACTCCTACAACACA 58.914 45.455 0.00 0.00 0.00 3.72
1721 3354 3.777465 TGCGAGATACTCCTACAACAC 57.223 47.619 0.00 0.00 0.00 3.32
1722 3355 4.794278 TTTGCGAGATACTCCTACAACA 57.206 40.909 0.00 0.00 0.00 3.33
1762 3399 2.049077 TAATTTGCTTGCGTGCACAG 57.951 45.000 18.64 10.86 43.20 3.66
1780 3417 5.163834 GCCTTCGATCAAAAACACGGTATTA 60.164 40.000 0.00 0.00 0.00 0.98
1831 3494 5.200734 GAAGTAATTCGGAACTTCGGAAC 57.799 43.478 12.55 3.57 41.43 3.62
1838 3501 8.344098 CGTATCTAAGAGAAGTAATTCGGAACT 58.656 37.037 0.00 0.00 0.00 3.01
1839 3502 7.590689 CCGTATCTAAGAGAAGTAATTCGGAAC 59.409 40.741 0.00 0.00 34.76 3.62
1840 3503 7.500227 TCCGTATCTAAGAGAAGTAATTCGGAA 59.500 37.037 0.00 0.00 38.07 4.30
1841 3504 6.994496 TCCGTATCTAAGAGAAGTAATTCGGA 59.006 38.462 0.00 0.00 38.55 4.55
1842 3505 7.199541 TCCGTATCTAAGAGAAGTAATTCGG 57.800 40.000 0.00 0.00 0.00 4.30
1843 3506 7.041235 ACCTCCGTATCTAAGAGAAGTAATTCG 60.041 40.741 0.00 0.00 0.00 3.34
1844 3507 8.168790 ACCTCCGTATCTAAGAGAAGTAATTC 57.831 38.462 0.00 0.00 0.00 2.17
1845 3508 9.810870 ATACCTCCGTATCTAAGAGAAGTAATT 57.189 33.333 0.00 0.00 28.45 1.40
1846 3509 9.452287 GATACCTCCGTATCTAAGAGAAGTAAT 57.548 37.037 3.54 0.00 45.11 1.89
1847 3510 8.845413 GATACCTCCGTATCTAAGAGAAGTAA 57.155 38.462 3.54 0.00 45.11 2.24
1860 3523 2.383442 AGTGCCAGATACCTCCGTAT 57.617 50.000 0.00 0.00 37.92 3.06
1861 3524 3.301794 TTAGTGCCAGATACCTCCGTA 57.698 47.619 0.00 0.00 0.00 4.02
1862 3525 2.154567 TTAGTGCCAGATACCTCCGT 57.845 50.000 0.00 0.00 0.00 4.69
1863 3526 3.536956 TTTTAGTGCCAGATACCTCCG 57.463 47.619 0.00 0.00 0.00 4.63
1864 3527 6.592870 ACTTATTTTAGTGCCAGATACCTCC 58.407 40.000 0.00 0.00 0.00 4.30
1865 3528 7.501844 AGACTTATTTTAGTGCCAGATACCTC 58.498 38.462 0.00 0.00 0.00 3.85
1866 3529 7.439108 AGACTTATTTTAGTGCCAGATACCT 57.561 36.000 0.00 0.00 0.00 3.08
1867 3530 8.639761 TCTAGACTTATTTTAGTGCCAGATACC 58.360 37.037 0.00 0.00 0.00 2.73
1871 3534 8.350722 CGTATCTAGACTTATTTTAGTGCCAGA 58.649 37.037 0.00 0.00 0.00 3.86
1872 3535 7.595502 CCGTATCTAGACTTATTTTAGTGCCAG 59.404 40.741 0.00 0.00 0.00 4.85
1873 3536 7.286087 TCCGTATCTAGACTTATTTTAGTGCCA 59.714 37.037 0.00 0.00 0.00 4.92
1874 3537 7.655490 TCCGTATCTAGACTTATTTTAGTGCC 58.345 38.462 0.00 0.00 0.00 5.01
1917 3580 9.698309 CTTGGATTTGTCTAGATACGAATGTAT 57.302 33.333 0.00 0.00 43.97 2.29
1918 3581 8.909923 TCTTGGATTTGTCTAGATACGAATGTA 58.090 33.333 0.00 0.00 34.30 2.29
1919 3582 7.707035 GTCTTGGATTTGTCTAGATACGAATGT 59.293 37.037 0.00 0.00 34.30 2.71
1920 3583 7.706607 TGTCTTGGATTTGTCTAGATACGAATG 59.293 37.037 0.00 0.00 34.30 2.67
1921 3584 7.782049 TGTCTTGGATTTGTCTAGATACGAAT 58.218 34.615 0.00 0.00 36.39 3.34
1922 3585 7.165460 TGTCTTGGATTTGTCTAGATACGAA 57.835 36.000 0.00 0.00 0.00 3.85
1923 3586 6.769134 TGTCTTGGATTTGTCTAGATACGA 57.231 37.500 0.00 0.00 0.00 3.43
1924 3587 7.036220 ACTTGTCTTGGATTTGTCTAGATACG 58.964 38.462 0.00 0.00 0.00 3.06
1925 3588 9.303537 GTACTTGTCTTGGATTTGTCTAGATAC 57.696 37.037 0.00 0.00 0.00 2.24
1926 3589 9.256228 AGTACTTGTCTTGGATTTGTCTAGATA 57.744 33.333 0.00 0.00 0.00 1.98
1927 3590 8.140112 AGTACTTGTCTTGGATTTGTCTAGAT 57.860 34.615 0.00 0.00 0.00 1.98
1928 3591 7.451877 AGAGTACTTGTCTTGGATTTGTCTAGA 59.548 37.037 0.00 0.00 0.00 2.43
1929 3592 7.607250 AGAGTACTTGTCTTGGATTTGTCTAG 58.393 38.462 0.00 0.00 0.00 2.43
1930 3593 7.451877 AGAGAGTACTTGTCTTGGATTTGTCTA 59.548 37.037 0.00 0.00 0.00 2.59
1931 3594 6.268847 AGAGAGTACTTGTCTTGGATTTGTCT 59.731 38.462 0.00 0.00 0.00 3.41
1932 3595 6.459923 AGAGAGTACTTGTCTTGGATTTGTC 58.540 40.000 0.00 0.00 0.00 3.18
1933 3596 6.426646 AGAGAGTACTTGTCTTGGATTTGT 57.573 37.500 0.00 0.00 0.00 2.83
1934 3597 5.872070 GGAGAGAGTACTTGTCTTGGATTTG 59.128 44.000 9.44 0.00 0.00 2.32
1935 3598 5.336849 CGGAGAGAGTACTTGTCTTGGATTT 60.337 44.000 9.44 0.00 0.00 2.17
1936 3599 4.158764 CGGAGAGAGTACTTGTCTTGGATT 59.841 45.833 9.44 0.00 0.00 3.01
1937 3600 3.697045 CGGAGAGAGTACTTGTCTTGGAT 59.303 47.826 9.44 0.00 0.00 3.41
1938 3601 3.082548 CGGAGAGAGTACTTGTCTTGGA 58.917 50.000 9.44 0.00 0.00 3.53
1939 3602 2.820787 ACGGAGAGAGTACTTGTCTTGG 59.179 50.000 9.44 7.58 0.00 3.61
1940 3603 3.754323 AGACGGAGAGAGTACTTGTCTTG 59.246 47.826 9.44 8.26 34.61 3.02
1941 3604 4.004982 GAGACGGAGAGAGTACTTGTCTT 58.995 47.826 9.44 0.00 36.65 3.01
1942 3605 3.008157 TGAGACGGAGAGAGTACTTGTCT 59.992 47.826 8.13 8.13 38.03 3.41
1943 3606 3.336468 TGAGACGGAGAGAGTACTTGTC 58.664 50.000 0.00 0.00 0.00 3.18
1944 3607 3.420300 TGAGACGGAGAGAGTACTTGT 57.580 47.619 0.00 0.00 0.00 3.16
1945 3608 4.768130 TTTGAGACGGAGAGAGTACTTG 57.232 45.455 0.00 0.00 0.00 3.16
1946 3609 5.986501 ATTTTGAGACGGAGAGAGTACTT 57.013 39.130 0.00 0.00 0.00 2.24
1947 3610 5.712917 AGAATTTTGAGACGGAGAGAGTACT 59.287 40.000 0.00 0.00 0.00 2.73
1948 3611 5.956642 AGAATTTTGAGACGGAGAGAGTAC 58.043 41.667 0.00 0.00 0.00 2.73
1949 3612 6.015350 ACAAGAATTTTGAGACGGAGAGAGTA 60.015 38.462 7.18 0.00 0.00 2.59
1950 3613 5.221541 ACAAGAATTTTGAGACGGAGAGAGT 60.222 40.000 7.18 0.00 0.00 3.24
1951 3614 5.233988 ACAAGAATTTTGAGACGGAGAGAG 58.766 41.667 7.18 0.00 0.00 3.20
1952 3615 5.011125 AGACAAGAATTTTGAGACGGAGAGA 59.989 40.000 7.18 0.00 0.00 3.10
1953 3616 5.233988 AGACAAGAATTTTGAGACGGAGAG 58.766 41.667 7.18 0.00 0.00 3.20
1954 3617 5.215252 AGACAAGAATTTTGAGACGGAGA 57.785 39.130 7.18 0.00 0.00 3.71
1955 3618 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
1956 3619 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
1957 3620 7.602517 ATCTAAGACAAGAATTTTGAGACGG 57.397 36.000 7.18 0.00 0.00 4.79
1958 3621 9.322776 CAAATCTAAGACAAGAATTTTGAGACG 57.677 33.333 7.18 0.00 31.51 4.18
1967 3630 9.323985 GCATCTAGACAAATCTAAGACAAGAAT 57.676 33.333 0.00 0.00 36.98 2.40
1968 3631 7.489435 CGCATCTAGACAAATCTAAGACAAGAA 59.511 37.037 0.00 0.00 36.98 2.52
1969 3632 6.975197 CGCATCTAGACAAATCTAAGACAAGA 59.025 38.462 0.00 0.00 36.98 3.02
1970 3633 6.199908 CCGCATCTAGACAAATCTAAGACAAG 59.800 42.308 0.00 0.00 36.98 3.16
1971 3634 6.042777 CCGCATCTAGACAAATCTAAGACAA 58.957 40.000 0.00 0.00 36.98 3.18
1972 3635 5.359860 TCCGCATCTAGACAAATCTAAGACA 59.640 40.000 0.00 0.00 36.98 3.41
1973 3636 5.833082 TCCGCATCTAGACAAATCTAAGAC 58.167 41.667 0.00 0.00 36.98 3.01
1974 3637 6.656632 ATCCGCATCTAGACAAATCTAAGA 57.343 37.500 0.00 0.00 36.98 2.10
1977 3640 9.634021 AGATATATCCGCATCTAGACAAATCTA 57.366 33.333 9.18 0.00 36.29 1.98
1978 3641 8.532186 AGATATATCCGCATCTAGACAAATCT 57.468 34.615 9.18 0.00 39.15 2.40
2047 3710 9.506018 CTCCATTTGTCCCAAAATTCTTATTTT 57.494 29.630 0.00 0.00 43.09 1.82
2048 3711 8.659527 ACTCCATTTGTCCCAAAATTCTTATTT 58.340 29.630 0.00 0.00 35.49 1.40
2049 3712 8.206126 ACTCCATTTGTCCCAAAATTCTTATT 57.794 30.769 0.00 0.00 0.00 1.40
2050 3713 7.797121 ACTCCATTTGTCCCAAAATTCTTAT 57.203 32.000 0.00 0.00 0.00 1.73
2051 3714 8.713708 TTACTCCATTTGTCCCAAAATTCTTA 57.286 30.769 0.00 0.00 0.00 2.10
2052 3715 7.610580 TTACTCCATTTGTCCCAAAATTCTT 57.389 32.000 0.00 0.00 0.00 2.52
2053 3716 7.797121 ATTACTCCATTTGTCCCAAAATTCT 57.203 32.000 0.00 0.00 0.00 2.40
2054 3717 7.275560 CGAATTACTCCATTTGTCCCAAAATTC 59.724 37.037 0.00 0.00 0.00 2.17
2055 3718 7.039363 TCGAATTACTCCATTTGTCCCAAAATT 60.039 33.333 0.00 0.00 0.00 1.82
2056 3719 6.435904 TCGAATTACTCCATTTGTCCCAAAAT 59.564 34.615 0.00 0.00 0.00 1.82
2057 3720 5.770663 TCGAATTACTCCATTTGTCCCAAAA 59.229 36.000 0.00 0.00 0.00 2.44
2058 3721 5.317808 TCGAATTACTCCATTTGTCCCAAA 58.682 37.500 0.00 0.00 0.00 3.28
2059 3722 4.912586 TCGAATTACTCCATTTGTCCCAA 58.087 39.130 0.00 0.00 0.00 4.12
2060 3723 4.561500 TCGAATTACTCCATTTGTCCCA 57.438 40.909 0.00 0.00 0.00 4.37
2061 3724 5.637809 GTTTCGAATTACTCCATTTGTCCC 58.362 41.667 0.00 0.00 0.00 4.46
2062 3725 5.321516 CGTTTCGAATTACTCCATTTGTCC 58.678 41.667 0.00 0.00 0.00 4.02
2063 3726 5.121142 TCCGTTTCGAATTACTCCATTTGTC 59.879 40.000 0.00 0.00 0.00 3.18
2064 3727 4.998672 TCCGTTTCGAATTACTCCATTTGT 59.001 37.500 0.00 0.00 0.00 2.83
2065 3728 5.447279 CCTCCGTTTCGAATTACTCCATTTG 60.447 44.000 0.00 0.00 0.00 2.32
2066 3729 4.634443 CCTCCGTTTCGAATTACTCCATTT 59.366 41.667 0.00 0.00 0.00 2.32
2067 3730 4.189231 CCTCCGTTTCGAATTACTCCATT 58.811 43.478 0.00 0.00 0.00 3.16
2068 3731 3.431766 CCCTCCGTTTCGAATTACTCCAT 60.432 47.826 0.00 0.00 0.00 3.41
2069 3732 2.093869 CCCTCCGTTTCGAATTACTCCA 60.094 50.000 0.00 0.00 0.00 3.86
2070 3733 2.167075 TCCCTCCGTTTCGAATTACTCC 59.833 50.000 0.00 0.00 0.00 3.85
2071 3734 3.119209 ACTCCCTCCGTTTCGAATTACTC 60.119 47.826 0.00 0.00 0.00 2.59
2072 3735 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
2073 3736 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
2074 3737 3.181497 CGTACTCCCTCCGTTTCGAATTA 60.181 47.826 0.00 0.00 0.00 1.40
2075 3738 2.416431 CGTACTCCCTCCGTTTCGAATT 60.416 50.000 0.00 0.00 0.00 2.17
2076 3739 1.133790 CGTACTCCCTCCGTTTCGAAT 59.866 52.381 0.00 0.00 0.00 3.34
2077 3740 0.523072 CGTACTCCCTCCGTTTCGAA 59.477 55.000 0.00 0.00 0.00 3.71
2078 3741 0.606401 ACGTACTCCCTCCGTTTCGA 60.606 55.000 0.00 0.00 0.00 3.71
2079 3742 1.086696 TACGTACTCCCTCCGTTTCG 58.913 55.000 0.00 0.00 36.12 3.46
2080 3743 1.202076 CGTACGTACTCCCTCCGTTTC 60.202 57.143 22.55 0.00 36.12 2.78
2081 3744 0.804989 CGTACGTACTCCCTCCGTTT 59.195 55.000 22.55 0.00 36.12 3.60
2082 3745 0.321653 ACGTACGTACTCCCTCCGTT 60.322 55.000 21.41 0.00 36.12 4.44
2083 3746 1.021390 CACGTACGTACTCCCTCCGT 61.021 60.000 22.34 11.27 38.53 4.69
2084 3747 1.021390 ACACGTACGTACTCCCTCCG 61.021 60.000 22.34 7.82 0.00 4.63
2085 3748 0.449388 CACACGTACGTACTCCCTCC 59.551 60.000 22.34 0.00 0.00 4.30
2086 3749 1.160137 ACACACGTACGTACTCCCTC 58.840 55.000 22.34 0.00 0.00 4.30
2087 3750 2.472695 TACACACGTACGTACTCCCT 57.527 50.000 22.34 3.20 0.00 4.20
2088 3751 3.552604 TTTACACACGTACGTACTCCC 57.447 47.619 22.34 0.00 0.00 4.30
2089 3752 6.363357 AGAAAATTTACACACGTACGTACTCC 59.637 38.462 22.34 0.00 0.00 3.85
2090 3753 7.324616 AGAGAAAATTTACACACGTACGTACTC 59.675 37.037 22.34 13.28 0.00 2.59
2091 3754 7.113965 CAGAGAAAATTTACACACGTACGTACT 59.886 37.037 22.34 6.25 0.00 2.73
2092 3755 7.215844 CAGAGAAAATTTACACACGTACGTAC 58.784 38.462 22.34 15.90 0.00 3.67
2093 3756 6.129115 GCAGAGAAAATTTACACACGTACGTA 60.129 38.462 22.34 4.43 0.00 3.57
2094 3757 5.332808 GCAGAGAAAATTTACACACGTACGT 60.333 40.000 16.72 16.72 0.00 3.57
2095 3758 5.070862 GCAGAGAAAATTTACACACGTACG 58.929 41.667 15.01 15.01 0.00 3.67
2096 3759 5.070862 CGCAGAGAAAATTTACACACGTAC 58.929 41.667 0.00 0.00 0.00 3.67
2097 3760 4.983538 TCGCAGAGAAAATTTACACACGTA 59.016 37.500 0.00 0.00 0.00 3.57
2098 3761 3.805422 TCGCAGAGAAAATTTACACACGT 59.195 39.130 0.00 0.00 0.00 4.49
2099 3762 4.383774 TCGCAGAGAAAATTTACACACG 57.616 40.909 0.00 0.00 0.00 4.49
2100 3763 6.303259 GTCATTCGCAGAGAAAATTTACACAC 59.697 38.462 0.00 0.00 42.91 3.82
2101 3764 6.370593 GTCATTCGCAGAGAAAATTTACACA 58.629 36.000 0.00 0.00 42.91 3.72
2102 3765 5.504755 CGTCATTCGCAGAGAAAATTTACAC 59.495 40.000 0.00 0.00 42.91 2.90
2103 3766 5.178623 ACGTCATTCGCAGAGAAAATTTACA 59.821 36.000 0.00 0.00 42.91 2.41
2115 3778 0.796870 TAGACGCACGTCATTCGCAG 60.797 55.000 23.59 0.00 46.76 5.18
2135 3798 1.002033 CAGCTTCACAACCTTCTGCAC 60.002 52.381 0.00 0.00 0.00 4.57
2208 3891 5.533903 AGACTGTAGGACACGAAACTAGAAA 59.466 40.000 0.00 0.00 0.00 2.52
2214 3897 5.100943 GGATTAGACTGTAGGACACGAAAC 58.899 45.833 0.00 0.00 0.00 2.78
2253 3936 1.107114 CTCCTACGGTGAGTGCTCAT 58.893 55.000 5.11 0.00 42.18 2.90
2262 3945 1.722677 GCGACTCTCTCCTACGGTG 59.277 63.158 0.00 0.00 0.00 4.94
2279 3962 1.139163 CAAAACTGCCATTTGACCGC 58.861 50.000 1.01 0.00 39.56 5.68
2289 3972 2.945278 TGATGCGATTTCAAAACTGCC 58.055 42.857 0.00 0.00 0.00 4.85
2307 3990 0.315886 ACGAGTGTGGCACGTATTGA 59.684 50.000 13.77 0.00 42.26 2.57
2359 4042 3.803340 TCCAAGGAGGGAGAATTACACT 58.197 45.455 0.00 0.00 38.24 3.55
2361 4044 4.788075 TGAATCCAAGGAGGGAGAATTACA 59.212 41.667 0.00 0.00 41.08 2.41
2377 4060 3.202818 ACCCATGCTTGTAGATGAATCCA 59.797 43.478 0.00 0.00 0.00 3.41
2380 4063 5.263599 TCAAACCCATGCTTGTAGATGAAT 58.736 37.500 0.00 0.00 0.00 2.57
2412 4095 5.188434 TGCCAATTTTTGACATCAAACCAA 58.812 33.333 6.55 0.83 44.56 3.67
2414 4097 5.691815 CATGCCAATTTTTGACATCAAACC 58.308 37.500 6.55 0.00 44.56 3.27
2416 4099 4.215827 GGCATGCCAATTTTTGACATCAAA 59.784 37.500 32.08 2.89 38.79 2.69
2417 4100 3.752222 GGCATGCCAATTTTTGACATCAA 59.248 39.130 32.08 0.00 31.01 2.57
2419 4102 3.336468 TGGCATGCCAATTTTTGACATC 58.664 40.909 36.95 5.36 44.12 3.06
2420 4103 3.420300 TGGCATGCCAATTTTTGACAT 57.580 38.095 36.95 0.00 44.12 3.06
2421 4104 2.924757 TGGCATGCCAATTTTTGACA 57.075 40.000 36.95 9.68 44.12 3.58
2431 4114 1.264295 TGCTAAACATTGGCATGCCA 58.736 45.000 35.59 35.59 42.49 4.92
2439 4122 4.433186 TTTGACCCGATGCTAAACATTG 57.567 40.909 0.00 0.00 39.84 2.82
2440 4123 6.959639 ATATTTGACCCGATGCTAAACATT 57.040 33.333 0.00 0.00 39.84 2.71
2441 4124 6.545666 TCAATATTTGACCCGATGCTAAACAT 59.454 34.615 0.00 0.00 36.80 2.71
2442 4125 5.883115 TCAATATTTGACCCGATGCTAAACA 59.117 36.000 0.00 0.00 34.08 2.83
2443 4126 6.371809 TCAATATTTGACCCGATGCTAAAC 57.628 37.500 0.00 0.00 34.08 2.01
2479 4162 9.942850 TGAGATAGACAAGACAATTTGATAACA 57.057 29.630 2.79 0.00 0.00 2.41
2489 4172 9.634021 AGTGACTATATGAGATAGACAAGACAA 57.366 33.333 0.46 0.00 30.69 3.18
2503 4186 9.132923 CCCTGTTTTCTACTAGTGACTATATGA 57.867 37.037 5.39 0.00 0.00 2.15
2504 4187 7.868415 GCCCTGTTTTCTACTAGTGACTATATG 59.132 40.741 5.39 0.00 0.00 1.78
2505 4188 7.785506 AGCCCTGTTTTCTACTAGTGACTATAT 59.214 37.037 5.39 0.00 0.00 0.86
2506 4189 7.124052 AGCCCTGTTTTCTACTAGTGACTATA 58.876 38.462 5.39 0.00 0.00 1.31
2507 4190 5.958987 AGCCCTGTTTTCTACTAGTGACTAT 59.041 40.000 5.39 0.00 0.00 2.12
2508 4191 5.331069 AGCCCTGTTTTCTACTAGTGACTA 58.669 41.667 5.39 0.00 0.00 2.59
2509 4192 4.161102 AGCCCTGTTTTCTACTAGTGACT 58.839 43.478 5.39 0.00 0.00 3.41
2510 4193 4.538746 AGCCCTGTTTTCTACTAGTGAC 57.461 45.455 5.39 0.00 0.00 3.67
2511 4194 5.305585 CAAAGCCCTGTTTTCTACTAGTGA 58.694 41.667 5.39 0.00 0.00 3.41
2512 4195 4.455877 CCAAAGCCCTGTTTTCTACTAGTG 59.544 45.833 5.39 0.00 0.00 2.74
2513 4196 4.104261 ACCAAAGCCCTGTTTTCTACTAGT 59.896 41.667 0.00 0.00 0.00 2.57
2514 4197 4.652822 ACCAAAGCCCTGTTTTCTACTAG 58.347 43.478 0.00 0.00 0.00 2.57
2515 4198 4.506095 GGACCAAAGCCCTGTTTTCTACTA 60.506 45.833 0.00 0.00 0.00 1.82
2516 4199 3.487372 GACCAAAGCCCTGTTTTCTACT 58.513 45.455 0.00 0.00 0.00 2.57
2517 4200 2.557056 GGACCAAAGCCCTGTTTTCTAC 59.443 50.000 0.00 0.00 0.00 2.59
2518 4201 2.175931 TGGACCAAAGCCCTGTTTTCTA 59.824 45.455 0.00 0.00 0.00 2.10
2519 4202 1.063266 TGGACCAAAGCCCTGTTTTCT 60.063 47.619 0.00 0.00 0.00 2.52
2520 4203 1.341209 CTGGACCAAAGCCCTGTTTTC 59.659 52.381 0.00 0.00 0.00 2.29
2521 4204 1.413118 CTGGACCAAAGCCCTGTTTT 58.587 50.000 0.00 0.00 0.00 2.43
2522 4205 0.469892 CCTGGACCAAAGCCCTGTTT 60.470 55.000 0.00 0.00 0.00 2.83
2523 4206 1.153756 CCTGGACCAAAGCCCTGTT 59.846 57.895 0.00 0.00 0.00 3.16
2524 4207 2.846532 CCTGGACCAAAGCCCTGT 59.153 61.111 0.00 0.00 0.00 4.00
2525 4208 2.677875 GCCTGGACCAAAGCCCTG 60.678 66.667 0.00 0.00 0.00 4.45
2526 4209 3.984732 GGCCTGGACCAAAGCCCT 61.985 66.667 20.24 0.00 39.60 5.19
2530 4213 3.920093 GACCCGGCCTGGACCAAAG 62.920 68.421 21.63 2.26 42.00 2.77
2531 4214 3.961414 GACCCGGCCTGGACCAAA 61.961 66.667 21.63 0.00 42.00 3.28
2545 4228 1.146263 CGGGACTAATGGGCTGACC 59.854 63.158 0.00 0.00 40.81 4.02
2546 4229 1.146263 CCGGGACTAATGGGCTGAC 59.854 63.158 0.00 0.00 0.00 3.51
2547 4230 0.912487 AACCGGGACTAATGGGCTGA 60.912 55.000 6.32 0.00 0.00 4.26
2548 4231 0.463833 GAACCGGGACTAATGGGCTG 60.464 60.000 6.32 0.00 0.00 4.85
2549 4232 0.912487 TGAACCGGGACTAATGGGCT 60.912 55.000 6.32 0.00 0.00 5.19
2550 4233 0.463833 CTGAACCGGGACTAATGGGC 60.464 60.000 6.32 0.00 0.00 5.36
2551 4234 0.909623 ACTGAACCGGGACTAATGGG 59.090 55.000 6.32 0.00 0.00 4.00
2552 4235 1.134491 GGACTGAACCGGGACTAATGG 60.134 57.143 6.32 0.00 0.00 3.16
2553 4236 1.553248 TGGACTGAACCGGGACTAATG 59.447 52.381 6.32 0.00 0.00 1.90
2554 4237 1.831736 CTGGACTGAACCGGGACTAAT 59.168 52.381 6.32 0.00 33.06 1.73
2555 4238 1.203087 TCTGGACTGAACCGGGACTAA 60.203 52.381 6.32 0.00 36.97 2.24
2556 4239 0.406750 TCTGGACTGAACCGGGACTA 59.593 55.000 6.32 0.00 36.97 2.59
2557 4240 0.471211 TTCTGGACTGAACCGGGACT 60.471 55.000 6.32 0.00 36.97 3.85
2558 4241 0.320508 GTTCTGGACTGAACCGGGAC 60.321 60.000 6.32 0.00 40.10 4.46
2559 4242 2.055299 GTTCTGGACTGAACCGGGA 58.945 57.895 6.32 0.00 40.10 5.14
2560 4243 4.695560 GTTCTGGACTGAACCGGG 57.304 61.111 6.32 0.00 40.10 5.73
2564 4247 2.055299 TCCCGGTTCTGGACTGAAC 58.945 57.895 12.04 12.04 43.88 3.18
2565 4248 4.631493 TCCCGGTTCTGGACTGAA 57.369 55.556 0.00 0.00 36.72 3.02
2570 4253 1.131303 ACATTGGTCCCGGTTCTGGA 61.131 55.000 0.00 0.00 0.00 3.86
2571 4254 0.251165 AACATTGGTCCCGGTTCTGG 60.251 55.000 0.00 0.00 0.00 3.86
2572 4255 0.881118 CAACATTGGTCCCGGTTCTG 59.119 55.000 0.00 0.00 0.00 3.02
2573 4256 0.251165 CCAACATTGGTCCCGGTTCT 60.251 55.000 0.00 0.00 43.43 3.01
2574 4257 2.263153 CCAACATTGGTCCCGGTTC 58.737 57.895 0.00 0.00 43.43 3.62
2575 4258 4.511838 CCAACATTGGTCCCGGTT 57.488 55.556 0.00 0.00 43.43 4.44
2586 4269 0.541764 ACCGGAACCAATGCCAACAT 60.542 50.000 9.46 0.00 38.49 2.71
2587 4270 0.757188 AACCGGAACCAATGCCAACA 60.757 50.000 9.46 0.00 0.00 3.33
2588 4271 0.038618 GAACCGGAACCAATGCCAAC 60.039 55.000 9.46 0.00 0.00 3.77
2589 4272 1.519751 CGAACCGGAACCAATGCCAA 61.520 55.000 9.46 0.00 0.00 4.52
2590 4273 1.969064 CGAACCGGAACCAATGCCA 60.969 57.895 9.46 0.00 0.00 4.92
2591 4274 1.969589 ACGAACCGGAACCAATGCC 60.970 57.895 9.46 0.00 0.00 4.40
2592 4275 1.209127 CACGAACCGGAACCAATGC 59.791 57.895 9.46 0.00 0.00 3.56
2593 4276 1.069500 GTTCACGAACCGGAACCAATG 60.069 52.381 9.46 0.00 37.92 2.82
2594 4277 1.232119 GTTCACGAACCGGAACCAAT 58.768 50.000 9.46 0.00 37.92 3.16
2595 4278 2.692817 GTTCACGAACCGGAACCAA 58.307 52.632 9.46 0.00 37.92 3.67
2596 4279 4.442018 GTTCACGAACCGGAACCA 57.558 55.556 9.46 0.00 37.92 3.67
2604 4287 1.302271 GTCCCCTGGGTTCACGAAC 60.302 63.158 12.71 1.12 40.45 3.95
2605 4288 2.522367 GGTCCCCTGGGTTCACGAA 61.522 63.158 12.71 0.00 36.47 3.85
2606 4289 2.926242 GGTCCCCTGGGTTCACGA 60.926 66.667 12.71 0.00 36.47 4.35
2607 4290 4.388499 CGGTCCCCTGGGTTCACG 62.388 72.222 12.71 6.96 36.47 4.35
2608 4291 4.029809 CCGGTCCCCTGGGTTCAC 62.030 72.222 12.71 5.10 36.47 3.18
2630 4313 3.747976 GACCAATGGCCCACGTGC 61.748 66.667 10.91 0.00 0.00 5.34
2631 4314 3.061848 GGACCAATGGCCCACGTG 61.062 66.667 9.08 9.08 0.00 4.49
2632 4315 4.360405 GGGACCAATGGCCCACGT 62.360 66.667 21.67 0.00 38.39 4.49
2636 4319 4.376170 AACCGGGACCAATGGCCC 62.376 66.667 18.15 18.15 36.26 5.80
2637 4320 2.754254 GAACCGGGACCAATGGCC 60.754 66.667 6.32 0.00 0.00 5.36
2638 4321 1.379843 ATGAACCGGGACCAATGGC 60.380 57.895 6.32 0.00 0.00 4.40
2639 4322 0.255890 AGATGAACCGGGACCAATGG 59.744 55.000 6.32 0.00 0.00 3.16
2640 4323 1.382522 CAGATGAACCGGGACCAATG 58.617 55.000 6.32 0.67 0.00 2.82
2641 4324 0.255890 CCAGATGAACCGGGACCAAT 59.744 55.000 6.32 0.00 0.00 3.16
2642 4325 0.838554 TCCAGATGAACCGGGACCAA 60.839 55.000 6.32 0.00 0.00 3.67
2643 4326 1.229368 TCCAGATGAACCGGGACCA 60.229 57.895 6.32 0.00 0.00 4.02
2644 4327 1.221021 GTCCAGATGAACCGGGACC 59.779 63.158 6.32 0.00 43.14 4.46
2645 4328 4.934989 GTCCAGATGAACCGGGAC 57.065 61.111 6.32 0.00 42.60 4.46
2646 4329 0.546747 AAGGTCCAGATGAACCGGGA 60.547 55.000 6.32 0.00 0.00 5.14
2647 4330 0.328258 AAAGGTCCAGATGAACCGGG 59.672 55.000 6.32 0.00 0.00 5.73
2648 4331 1.812571 CAAAAGGTCCAGATGAACCGG 59.187 52.381 0.00 0.00 0.00 5.28
2649 4332 1.812571 CCAAAAGGTCCAGATGAACCG 59.187 52.381 0.00 0.00 0.00 4.44
2650 4333 2.820197 GACCAAAAGGTCCAGATGAACC 59.180 50.000 3.27 0.00 33.21 3.62
2660 4343 1.176619 CCAACCGGGACCAAAAGGTC 61.177 60.000 6.32 6.11 40.01 3.85
2661 4344 1.152631 CCAACCGGGACCAAAAGGT 60.153 57.895 6.32 0.00 40.01 3.50
2662 4345 1.152631 ACCAACCGGGACCAAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
2663 4346 1.460273 CCACCAACCGGGACCAAAAG 61.460 60.000 6.32 0.00 41.15 2.27
2664 4347 1.455959 CCACCAACCGGGACCAAAA 60.456 57.895 6.32 0.00 41.15 2.44
2665 4348 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
2671 4354 0.681887 GGTTTATCCCACCAACCGGG 60.682 60.000 6.32 0.00 46.03 5.73
2672 4355 2.876581 GGTTTATCCCACCAACCGG 58.123 57.895 0.00 0.00 34.04 5.28
2674 4357 0.681887 CCCGGTTTATCCCACCAACC 60.682 60.000 0.00 0.00 37.24 3.77
2675 4358 0.328926 TCCCGGTTTATCCCACCAAC 59.671 55.000 0.00 0.00 33.36 3.77
2676 4359 0.328926 GTCCCGGTTTATCCCACCAA 59.671 55.000 0.00 0.00 33.36 3.67
2677 4360 1.564483 GGTCCCGGTTTATCCCACCA 61.564 60.000 0.00 0.00 33.36 4.17
2678 4361 1.225426 GGTCCCGGTTTATCCCACC 59.775 63.158 0.00 0.00 0.00 4.61
2679 4362 0.328926 TTGGTCCCGGTTTATCCCAC 59.671 55.000 0.00 0.00 0.00 4.61
2680 4363 1.064314 CATTGGTCCCGGTTTATCCCA 60.064 52.381 0.00 0.00 0.00 4.37
2681 4364 1.687563 CATTGGTCCCGGTTTATCCC 58.312 55.000 0.00 0.00 0.00 3.85
2682 4365 1.029681 GCATTGGTCCCGGTTTATCC 58.970 55.000 0.00 0.00 0.00 2.59
2683 4366 0.661020 CGCATTGGTCCCGGTTTATC 59.339 55.000 0.00 0.00 0.00 1.75
2684 4367 1.381165 GCGCATTGGTCCCGGTTTAT 61.381 55.000 0.30 0.00 0.00 1.40
2685 4368 2.041686 GCGCATTGGTCCCGGTTTA 61.042 57.895 0.30 0.00 0.00 2.01
2686 4369 3.370231 GCGCATTGGTCCCGGTTT 61.370 61.111 0.30 0.00 0.00 3.27
2703 4386 3.541713 GGTAGGCCAGGAGCGAGG 61.542 72.222 5.01 0.00 45.17 4.63
2704 4387 2.759973 TGGTAGGCCAGGAGCGAG 60.760 66.667 5.01 0.00 45.17 5.03
2720 4403 1.976474 CCAACCGGGACCAATGGTG 60.976 63.158 10.84 0.00 40.01 4.17
2721 4404 2.438795 CCAACCGGGACCAATGGT 59.561 61.111 3.74 3.74 40.01 3.55
2722 4405 1.976474 CACCAACCGGGACCAATGG 60.976 63.158 6.32 0.00 41.15 3.16
2723 4406 1.976474 CCACCAACCGGGACCAATG 60.976 63.158 6.32 0.00 41.15 2.82
2724 4407 2.438795 CCACCAACCGGGACCAAT 59.561 61.111 6.32 0.00 41.15 3.16
2725 4408 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
2727 4410 4.280019 AAGCCACCAACCGGGACC 62.280 66.667 6.32 0.00 41.15 4.46
2728 4411 2.983592 CAAGCCACCAACCGGGAC 60.984 66.667 6.32 0.00 41.15 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.