Multiple sequence alignment - TraesCS7A01G409100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G409100 chr7A 100.000 3167 0 0 1 3167 595197599 595200765 0.000000e+00 5849
1 TraesCS7A01G409100 chr7A 88.611 799 91 0 1240 2038 595069695 595068897 0.000000e+00 972
2 TraesCS7A01G409100 chr7A 87.081 209 24 3 334 541 619160828 619160622 1.900000e-57 233
3 TraesCS7A01G409100 chr7A 85.849 212 28 2 331 541 688691593 688691383 1.140000e-54 224
4 TraesCS7A01G409100 chr7A 86.341 205 28 0 337 541 698895437 698895233 1.140000e-54 224
5 TraesCS7A01G409100 chr7A 80.405 296 37 16 2471 2764 595281386 595281662 4.140000e-49 206
6 TraesCS7A01G409100 chr7D 94.798 2422 61 31 783 3167 519270781 519273174 0.000000e+00 3714
7 TraesCS7A01G409100 chr7D 87.359 799 101 0 1240 2038 519261821 519261023 0.000000e+00 917
8 TraesCS7A01G409100 chr7D 80.743 296 36 16 2471 2764 519407023 519407299 8.900000e-51 211
9 TraesCS7A01G409100 chr7D 98.551 69 1 0 270 338 519270718 519270786 4.290000e-24 122
10 TraesCS7A01G409100 chr7B 93.968 2437 83 25 770 3167 552665178 552667589 0.000000e+00 3627
11 TraesCS7A01G409100 chr7B 87.500 800 98 2 1240 2038 552560863 552560065 0.000000e+00 922
12 TraesCS7A01G409100 chr7B 79.592 294 34 18 2472 2764 552707098 552707366 1.500000e-43 187
13 TraesCS7A01G409100 chr7B 79.592 294 34 18 2472 2764 552754084 552754352 1.500000e-43 187
14 TraesCS7A01G409100 chr7B 81.633 196 25 6 2970 3163 552707758 552707944 5.470000e-33 152
15 TraesCS7A01G409100 chr7B 81.633 196 25 6 2970 3163 552754744 552754930 5.470000e-33 152
16 TraesCS7A01G409100 chr7B 81.215 181 25 4 2975 3155 552725711 552725882 1.530000e-28 137
17 TraesCS7A01G409100 chr7B 80.102 196 29 5 2960 3155 552766753 552766938 1.530000e-28 137
18 TraesCS7A01G409100 chr7B 87.097 124 6 4 232 345 552664831 552664954 7.130000e-27 132
19 TraesCS7A01G409100 chr2D 87.624 202 25 0 337 538 502673985 502674186 5.280000e-58 235
20 TraesCS7A01G409100 chr2D 88.344 163 17 2 573 734 24344566 24344405 8.960000e-46 195
21 TraesCS7A01G409100 chr6D 91.279 172 14 1 567 737 436880047 436880218 1.900000e-57 233
22 TraesCS7A01G409100 chr3D 91.279 172 14 1 567 737 560862803 560862974 1.900000e-57 233
23 TraesCS7A01G409100 chr2A 86.893 206 27 0 337 542 603914561 603914766 6.830000e-57 231
24 TraesCS7A01G409100 chr2A 86.893 206 25 2 334 538 725253028 725253232 2.460000e-56 230
25 TraesCS7A01G409100 chr5A 90.698 172 15 1 567 737 20420612 20420783 8.840000e-56 228
26 TraesCS7A01G409100 chr4D 83.399 253 34 3 331 575 386019708 386019960 8.840000e-56 228
27 TraesCS7A01G409100 chr4A 86.473 207 27 1 330 536 27645357 27645152 3.180000e-55 226
28 TraesCS7A01G409100 chr4A 87.273 165 21 0 573 737 517406632 517406468 4.170000e-44 189
29 TraesCS7A01G409100 chr1A 86.341 205 28 0 337 541 5102042 5101838 1.140000e-54 224
30 TraesCS7A01G409100 chr5D 90.964 166 14 1 573 737 417678184 417678019 4.110000e-54 222
31 TraesCS7A01G409100 chr3B 81.349 252 33 6 337 575 715875186 715874936 3.220000e-45 193
32 TraesCS7A01G409100 chr5B 88.608 158 16 2 573 729 544490407 544490563 1.160000e-44 191
33 TraesCS7A01G409100 chr5B 85.882 170 23 1 573 742 103463316 103463484 2.510000e-41 180
34 TraesCS7A01G409100 chr2B 87.349 166 21 0 573 738 76912299 76912134 1.160000e-44 191
35 TraesCS7A01G409100 chr2B 80.400 250 38 3 337 575 443209720 443209471 2.510000e-41 180


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G409100 chr7A 595197599 595200765 3166 False 5849.0 5849 100.0000 1 3167 1 chr7A.!!$F1 3166
1 TraesCS7A01G409100 chr7A 595068897 595069695 798 True 972.0 972 88.6110 1240 2038 1 chr7A.!!$R1 798
2 TraesCS7A01G409100 chr7D 519270718 519273174 2456 False 1918.0 3714 96.6745 270 3167 2 chr7D.!!$F2 2897
3 TraesCS7A01G409100 chr7D 519261023 519261821 798 True 917.0 917 87.3590 1240 2038 1 chr7D.!!$R1 798
4 TraesCS7A01G409100 chr7B 552664831 552667589 2758 False 1879.5 3627 90.5325 232 3167 2 chr7B.!!$F3 2935
5 TraesCS7A01G409100 chr7B 552560065 552560863 798 True 922.0 922 87.5000 1240 2038 1 chr7B.!!$R1 798

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
158 159 0.025001 CAAGTAGACGCGGCGAATTG 59.975 55.0 30.94 20.12 0.0 2.32 F
741 752 0.043032 ACGGAGGGGGTACATTGGTA 59.957 55.0 0.00 0.00 0.0 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1983 2068 1.07975 GCCGTCGAAGAGCCTCTTT 60.08 57.895 8.66 0.0 36.73 2.52 R
2543 2653 0.31990 GCTCTCGCAACAACAGAGGA 60.32 55.000 0.00 0.0 35.19 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.658398 AAGTGCTCCTTGACATGGG 57.342 52.632 7.48 0.00 30.18 4.00
19 20 0.038744 AAGTGCTCCTTGACATGGGG 59.961 55.000 7.48 5.22 30.18 4.96
20 21 0.842030 AGTGCTCCTTGACATGGGGA 60.842 55.000 11.41 2.26 0.00 4.81
21 22 0.038166 GTGCTCCTTGACATGGGGAA 59.962 55.000 11.41 0.00 0.00 3.97
22 23 0.329261 TGCTCCTTGACATGGGGAAG 59.671 55.000 11.41 1.35 0.00 3.46
23 24 1.034292 GCTCCTTGACATGGGGAAGC 61.034 60.000 11.41 7.48 0.00 3.86
24 25 0.329261 CTCCTTGACATGGGGAAGCA 59.671 55.000 0.73 0.00 0.00 3.91
25 26 0.329261 TCCTTGACATGGGGAAGCAG 59.671 55.000 7.48 0.00 0.00 4.24
26 27 0.682209 CCTTGACATGGGGAAGCAGG 60.682 60.000 0.00 0.00 0.00 4.85
27 28 1.304381 TTGACATGGGGAAGCAGGC 60.304 57.895 0.00 0.00 0.00 4.85
28 29 1.792757 TTGACATGGGGAAGCAGGCT 61.793 55.000 0.00 0.00 0.00 4.58
29 30 0.913934 TGACATGGGGAAGCAGGCTA 60.914 55.000 0.00 0.00 0.00 3.93
30 31 0.475906 GACATGGGGAAGCAGGCTAT 59.524 55.000 0.00 0.00 0.00 2.97
31 32 0.184451 ACATGGGGAAGCAGGCTATG 59.816 55.000 0.00 0.00 0.00 2.23
42 43 2.634815 CAGGCTATGCATCCAGAACT 57.365 50.000 0.19 0.00 0.00 3.01
43 44 2.928334 CAGGCTATGCATCCAGAACTT 58.072 47.619 0.19 0.00 0.00 2.66
44 45 2.617308 CAGGCTATGCATCCAGAACTTG 59.383 50.000 0.19 0.00 0.00 3.16
66 67 2.745884 CGCCATCGTTGCTTCCCA 60.746 61.111 0.00 0.00 0.00 4.37
67 68 2.331893 CGCCATCGTTGCTTCCCAA 61.332 57.895 0.00 0.00 0.00 4.12
68 69 1.861542 CGCCATCGTTGCTTCCCAAA 61.862 55.000 0.00 0.00 34.68 3.28
69 70 0.532115 GCCATCGTTGCTTCCCAAAT 59.468 50.000 0.00 0.00 34.68 2.32
70 71 1.736696 GCCATCGTTGCTTCCCAAATG 60.737 52.381 0.00 0.00 34.68 2.32
71 72 1.545582 CCATCGTTGCTTCCCAAATGT 59.454 47.619 0.00 0.00 34.68 2.71
72 73 2.415893 CCATCGTTGCTTCCCAAATGTC 60.416 50.000 0.00 0.00 34.68 3.06
73 74 1.974265 TCGTTGCTTCCCAAATGTCA 58.026 45.000 0.00 0.00 34.68 3.58
74 75 1.606668 TCGTTGCTTCCCAAATGTCAC 59.393 47.619 0.00 0.00 34.68 3.67
75 76 1.608590 CGTTGCTTCCCAAATGTCACT 59.391 47.619 0.00 0.00 34.68 3.41
76 77 2.605338 CGTTGCTTCCCAAATGTCACTG 60.605 50.000 0.00 0.00 34.68 3.66
77 78 1.619654 TGCTTCCCAAATGTCACTGG 58.380 50.000 0.00 0.00 0.00 4.00
78 79 1.144708 TGCTTCCCAAATGTCACTGGA 59.855 47.619 4.62 0.00 34.35 3.86
79 80 1.815003 GCTTCCCAAATGTCACTGGAG 59.185 52.381 4.62 0.00 34.35 3.86
80 81 1.815003 CTTCCCAAATGTCACTGGAGC 59.185 52.381 4.62 0.00 34.35 4.70
81 82 1.067295 TCCCAAATGTCACTGGAGCT 58.933 50.000 4.62 0.00 34.35 4.09
82 83 1.003580 TCCCAAATGTCACTGGAGCTC 59.996 52.381 4.71 4.71 34.35 4.09
83 84 1.457346 CCAAATGTCACTGGAGCTCC 58.543 55.000 26.78 26.78 34.35 4.70
84 85 1.081892 CAAATGTCACTGGAGCTCCG 58.918 55.000 27.43 22.72 39.43 4.63
85 86 0.674895 AAATGTCACTGGAGCTCCGC 60.675 55.000 27.43 14.73 39.43 5.54
86 87 1.548357 AATGTCACTGGAGCTCCGCT 61.548 55.000 27.43 12.22 43.88 5.52
107 108 3.640000 CGTGGCGGCGGAATGATC 61.640 66.667 9.78 0.00 0.00 2.92
108 109 3.640000 GTGGCGGCGGAATGATCG 61.640 66.667 9.78 0.00 0.00 3.69
109 110 4.908687 TGGCGGCGGAATGATCGG 62.909 66.667 9.78 0.00 0.00 4.18
115 116 2.460330 GCGGAATGATCGGCTATGG 58.540 57.895 1.67 0.00 45.54 2.74
116 117 0.037326 GCGGAATGATCGGCTATGGA 60.037 55.000 1.67 0.00 45.54 3.41
117 118 2.001812 CGGAATGATCGGCTATGGAG 57.998 55.000 0.00 0.00 0.00 3.86
126 127 3.133014 GCTATGGAGCTCCTGCGA 58.867 61.111 32.28 13.81 45.98 5.10
127 128 1.300542 GCTATGGAGCTCCTGCGAC 60.301 63.158 32.28 14.87 45.98 5.19
128 129 1.365633 CTATGGAGCTCCTGCGACC 59.634 63.158 32.28 6.35 45.42 4.79
129 130 2.413437 CTATGGAGCTCCTGCGACCG 62.413 65.000 32.28 10.69 45.42 4.79
132 133 3.518998 GAGCTCCTGCGACCGCTA 61.519 66.667 15.61 1.64 45.42 4.26
133 134 3.477224 GAGCTCCTGCGACCGCTAG 62.477 68.421 15.61 10.83 45.42 3.42
134 135 4.577246 GCTCCTGCGACCGCTAGG 62.577 72.222 19.45 19.45 42.51 3.02
135 136 3.905678 CTCCTGCGACCGCTAGGG 61.906 72.222 22.66 17.83 43.47 3.53
151 152 2.813908 GGCACCAAGTAGACGCGG 60.814 66.667 12.47 0.00 0.00 6.46
152 153 3.488090 GCACCAAGTAGACGCGGC 61.488 66.667 12.47 7.86 0.00 6.53
153 154 3.179265 CACCAAGTAGACGCGGCG 61.179 66.667 22.36 22.36 0.00 6.46
154 155 3.367743 ACCAAGTAGACGCGGCGA 61.368 61.111 30.94 0.00 0.00 5.54
155 156 2.126228 CCAAGTAGACGCGGCGAA 60.126 61.111 30.94 11.06 0.00 4.70
156 157 1.518572 CCAAGTAGACGCGGCGAAT 60.519 57.895 30.94 18.47 0.00 3.34
157 158 1.082117 CCAAGTAGACGCGGCGAATT 61.082 55.000 30.94 6.47 0.00 2.17
158 159 0.025001 CAAGTAGACGCGGCGAATTG 59.975 55.000 30.94 20.12 0.00 2.32
159 160 1.082117 AAGTAGACGCGGCGAATTGG 61.082 55.000 30.94 0.00 0.00 3.16
160 161 2.888534 TAGACGCGGCGAATTGGC 60.889 61.111 30.94 3.49 40.44 4.52
161 162 3.650907 TAGACGCGGCGAATTGGCA 62.651 57.895 30.94 3.51 45.16 4.92
162 163 4.520846 GACGCGGCGAATTGGCAG 62.521 66.667 30.94 11.39 45.16 4.85
166 167 3.798650 CGGCGAATTGGCAGCGAA 61.799 61.111 14.70 0.00 45.16 4.70
167 168 2.800736 GGCGAATTGGCAGCGAAT 59.199 55.556 14.70 0.00 44.08 3.34
168 169 1.298638 GGCGAATTGGCAGCGAATC 60.299 57.895 14.70 0.00 44.08 2.52
169 170 1.652329 GCGAATTGGCAGCGAATCG 60.652 57.895 7.65 9.65 0.00 3.34
170 171 2.005995 CGAATTGGCAGCGAATCGA 58.994 52.632 6.91 0.00 0.00 3.59
171 172 0.315382 CGAATTGGCAGCGAATCGAC 60.315 55.000 6.91 0.00 0.00 4.20
172 173 0.315382 GAATTGGCAGCGAATCGACG 60.315 55.000 6.91 0.00 0.00 5.12
200 201 3.818787 GACGCGGTCGGAGGCTAA 61.819 66.667 12.47 0.00 40.69 3.09
201 202 3.346631 GACGCGGTCGGAGGCTAAA 62.347 63.158 12.47 0.00 40.69 1.85
202 203 2.106332 CGCGGTCGGAGGCTAAAT 59.894 61.111 0.00 0.00 0.00 1.40
203 204 2.237751 CGCGGTCGGAGGCTAAATG 61.238 63.158 0.00 0.00 0.00 2.32
204 205 1.887707 GCGGTCGGAGGCTAAATGG 60.888 63.158 0.00 0.00 0.00 3.16
205 206 1.227556 CGGTCGGAGGCTAAATGGG 60.228 63.158 0.00 0.00 0.00 4.00
206 207 1.148498 GGTCGGAGGCTAAATGGGG 59.852 63.158 0.00 0.00 0.00 4.96
207 208 1.148498 GTCGGAGGCTAAATGGGGG 59.852 63.158 0.00 0.00 0.00 5.40
208 209 1.307517 TCGGAGGCTAAATGGGGGT 60.308 57.895 0.00 0.00 0.00 4.95
209 210 1.152963 CGGAGGCTAAATGGGGGTG 60.153 63.158 0.00 0.00 0.00 4.61
210 211 1.230212 GGAGGCTAAATGGGGGTGG 59.770 63.158 0.00 0.00 0.00 4.61
211 212 1.286305 GGAGGCTAAATGGGGGTGGA 61.286 60.000 0.00 0.00 0.00 4.02
212 213 0.183731 GAGGCTAAATGGGGGTGGAG 59.816 60.000 0.00 0.00 0.00 3.86
213 214 1.230212 GGCTAAATGGGGGTGGAGG 59.770 63.158 0.00 0.00 0.00 4.30
214 215 1.455773 GCTAAATGGGGGTGGAGGC 60.456 63.158 0.00 0.00 0.00 4.70
215 216 2.006748 CTAAATGGGGGTGGAGGCA 58.993 57.895 0.00 0.00 0.00 4.75
216 217 0.334676 CTAAATGGGGGTGGAGGCAA 59.665 55.000 0.00 0.00 0.00 4.52
217 218 0.787084 TAAATGGGGGTGGAGGCAAA 59.213 50.000 0.00 0.00 0.00 3.68
218 219 0.545071 AAATGGGGGTGGAGGCAAAG 60.545 55.000 0.00 0.00 0.00 2.77
219 220 3.607084 ATGGGGGTGGAGGCAAAGC 62.607 63.158 0.00 0.00 0.00 3.51
262 263 2.300956 TGCCACTTCATGCCCTAAAA 57.699 45.000 0.00 0.00 0.00 1.52
266 267 2.556622 CCACTTCATGCCCTAAAAACGT 59.443 45.455 0.00 0.00 0.00 3.99
333 344 2.689471 TCATGTTGCTTCACTTGCTTGT 59.311 40.909 0.00 0.00 0.00 3.16
338 349 4.272504 TGTTGCTTCACTTGCTTGTAGTAC 59.727 41.667 0.00 0.00 0.00 2.73
345 356 2.832733 ACTTGCTTGTAGTACTCCCTCC 59.167 50.000 0.00 0.00 0.00 4.30
346 357 2.615986 TGCTTGTAGTACTCCCTCCA 57.384 50.000 0.00 0.00 0.00 3.86
350 361 5.027460 TGCTTGTAGTACTCCCTCCATTTA 58.973 41.667 0.00 0.00 0.00 1.40
351 362 5.128827 TGCTTGTAGTACTCCCTCCATTTAG 59.871 44.000 0.00 0.00 0.00 1.85
354 365 7.147776 GCTTGTAGTACTCCCTCCATTTAGTTA 60.148 40.741 0.00 0.00 0.00 2.24
356 367 9.940974 TTGTAGTACTCCCTCCATTTAGTTATA 57.059 33.333 0.00 0.00 0.00 0.98
357 368 9.359653 TGTAGTACTCCCTCCATTTAGTTATAC 57.640 37.037 0.00 0.00 0.00 1.47
358 369 9.359653 GTAGTACTCCCTCCATTTAGTTATACA 57.640 37.037 0.00 0.00 0.00 2.29
359 370 8.849543 AGTACTCCCTCCATTTAGTTATACAA 57.150 34.615 0.00 0.00 0.00 2.41
360 371 8.925338 AGTACTCCCTCCATTTAGTTATACAAG 58.075 37.037 0.00 0.00 0.00 3.16
361 372 7.138054 ACTCCCTCCATTTAGTTATACAAGG 57.862 40.000 0.00 0.00 0.00 3.61
362 373 6.677076 ACTCCCTCCATTTAGTTATACAAGGT 59.323 38.462 0.00 0.00 0.00 3.50
364 375 6.674861 TCCCTCCATTTAGTTATACAAGGTCA 59.325 38.462 0.00 0.00 0.00 4.02
365 376 6.766467 CCCTCCATTTAGTTATACAAGGTCAC 59.234 42.308 0.00 0.00 0.00 3.67
366 377 7.365652 CCCTCCATTTAGTTATACAAGGTCACT 60.366 40.741 0.00 0.00 0.00 3.41
367 378 8.701895 CCTCCATTTAGTTATACAAGGTCACTA 58.298 37.037 0.00 0.00 0.00 2.74
398 409 5.772825 TCATTTTGCATCTATACAAGGCC 57.227 39.130 0.00 0.00 0.00 5.19
400 411 5.834742 TCATTTTGCATCTATACAAGGCCAT 59.165 36.000 5.01 0.00 0.00 4.40
402 413 4.436113 TTGCATCTATACAAGGCCATCA 57.564 40.909 5.01 0.00 0.00 3.07
406 417 4.214971 GCATCTATACAAGGCCATCAACAG 59.785 45.833 5.01 0.00 0.00 3.16
407 418 5.371526 CATCTATACAAGGCCATCAACAGT 58.628 41.667 5.01 0.00 0.00 3.55
410 421 7.136822 TCTATACAAGGCCATCAACAGTAAT 57.863 36.000 5.01 0.00 0.00 1.89
411 422 7.217200 TCTATACAAGGCCATCAACAGTAATC 58.783 38.462 5.01 0.00 0.00 1.75
412 423 4.032960 ACAAGGCCATCAACAGTAATCA 57.967 40.909 5.01 0.00 0.00 2.57
413 424 4.406456 ACAAGGCCATCAACAGTAATCAA 58.594 39.130 5.01 0.00 0.00 2.57
415 426 3.624777 AGGCCATCAACAGTAATCAAGG 58.375 45.455 5.01 0.00 0.00 3.61
417 428 2.754552 GCCATCAACAGTAATCAAGGCA 59.245 45.455 0.00 0.00 39.35 4.75
423 434 8.034215 CCATCAACAGTAATCAAGGCAAAATTA 58.966 33.333 0.00 0.00 0.00 1.40
426 437 9.421806 TCAACAGTAATCAAGGCAAAATTAATG 57.578 29.630 9.90 9.90 37.13 1.90
427 438 9.421806 CAACAGTAATCAAGGCAAAATTAATGA 57.578 29.630 15.28 0.00 35.57 2.57
448 459 7.948278 ATGATATTTTCTCGTACTAGCAACC 57.052 36.000 0.00 0.00 0.00 3.77
449 460 6.278363 TGATATTTTCTCGTACTAGCAACCC 58.722 40.000 0.00 0.00 0.00 4.11
450 461 4.546829 ATTTTCTCGTACTAGCAACCCA 57.453 40.909 0.00 0.00 0.00 4.51
451 462 4.546829 TTTTCTCGTACTAGCAACCCAT 57.453 40.909 0.00 0.00 0.00 4.00
452 463 4.546829 TTTCTCGTACTAGCAACCCATT 57.453 40.909 0.00 0.00 0.00 3.16
453 464 4.546829 TTCTCGTACTAGCAACCCATTT 57.453 40.909 0.00 0.00 0.00 2.32
454 465 5.664294 TTCTCGTACTAGCAACCCATTTA 57.336 39.130 0.00 0.00 0.00 1.40
455 466 5.664294 TCTCGTACTAGCAACCCATTTAA 57.336 39.130 0.00 0.00 0.00 1.52
456 467 6.229936 TCTCGTACTAGCAACCCATTTAAT 57.770 37.500 0.00 0.00 0.00 1.40
457 468 7.350744 TCTCGTACTAGCAACCCATTTAATA 57.649 36.000 0.00 0.00 0.00 0.98
458 469 7.205297 TCTCGTACTAGCAACCCATTTAATAC 58.795 38.462 0.00 0.00 0.00 1.89
459 470 7.069085 TCTCGTACTAGCAACCCATTTAATACT 59.931 37.037 0.00 0.00 0.00 2.12
460 471 7.558604 TCGTACTAGCAACCCATTTAATACTT 58.441 34.615 0.00 0.00 0.00 2.24
461 472 7.493320 TCGTACTAGCAACCCATTTAATACTTG 59.507 37.037 0.00 0.00 0.00 3.16
462 473 6.451064 ACTAGCAACCCATTTAATACTTGC 57.549 37.500 0.00 5.69 35.33 4.01
463 474 5.949354 ACTAGCAACCCATTTAATACTTGCA 59.051 36.000 12.70 0.00 37.14 4.08
464 475 5.937975 AGCAACCCATTTAATACTTGCAT 57.062 34.783 12.70 0.00 37.14 3.96
465 476 5.663456 AGCAACCCATTTAATACTTGCATG 58.337 37.500 12.70 0.00 37.14 4.06
466 477 5.187576 AGCAACCCATTTAATACTTGCATGT 59.812 36.000 10.40 10.40 37.14 3.21
467 478 6.379703 AGCAACCCATTTAATACTTGCATGTA 59.620 34.615 14.16 14.16 37.14 2.29
468 479 7.069826 AGCAACCCATTTAATACTTGCATGTAT 59.930 33.333 17.17 17.17 37.14 2.29
469 480 8.356657 GCAACCCATTTAATACTTGCATGTATA 58.643 33.333 21.65 10.03 35.23 1.47
470 481 9.677567 CAACCCATTTAATACTTGCATGTATAC 57.322 33.333 21.65 0.00 33.29 1.47
471 482 8.094798 ACCCATTTAATACTTGCATGTATACG 57.905 34.615 21.65 10.83 33.29 3.06
472 483 7.174253 ACCCATTTAATACTTGCATGTATACGG 59.826 37.037 21.65 16.77 33.29 4.02
473 484 7.174253 CCCATTTAATACTTGCATGTATACGGT 59.826 37.037 21.65 11.31 33.29 4.83
474 485 8.227791 CCATTTAATACTTGCATGTATACGGTC 58.772 37.037 21.65 0.00 33.29 4.79
475 486 8.769891 CATTTAATACTTGCATGTATACGGTCA 58.230 33.333 21.65 7.29 33.29 4.02
476 487 8.896320 TTTAATACTTGCATGTATACGGTCAT 57.104 30.769 21.65 9.84 33.29 3.06
477 488 9.984190 TTTAATACTTGCATGTATACGGTCATA 57.016 29.630 21.65 9.02 33.29 2.15
478 489 9.984190 TTAATACTTGCATGTATACGGTCATAA 57.016 29.630 21.65 13.33 33.29 1.90
480 491 6.785488 ACTTGCATGTATACGGTCATAATG 57.215 37.500 2.92 0.00 0.00 1.90
481 492 6.521162 ACTTGCATGTATACGGTCATAATGA 58.479 36.000 2.92 0.00 0.00 2.57
482 493 6.423905 ACTTGCATGTATACGGTCATAATGAC 59.576 38.462 2.92 0.00 46.23 3.06
499 510 9.547753 TCATAATGACAATTAGCTACTTCTTCC 57.452 33.333 0.00 0.00 31.81 3.46
500 511 9.330063 CATAATGACAATTAGCTACTTCTTCCA 57.670 33.333 0.00 0.00 31.81 3.53
501 512 7.617041 AATGACAATTAGCTACTTCTTCCAC 57.383 36.000 0.00 0.00 0.00 4.02
502 513 6.360370 TGACAATTAGCTACTTCTTCCACT 57.640 37.500 0.00 0.00 0.00 4.00
503 514 6.769512 TGACAATTAGCTACTTCTTCCACTT 58.230 36.000 0.00 0.00 0.00 3.16
504 515 7.903145 TGACAATTAGCTACTTCTTCCACTTA 58.097 34.615 0.00 0.00 0.00 2.24
505 516 8.372459 TGACAATTAGCTACTTCTTCCACTTAA 58.628 33.333 0.00 0.00 0.00 1.85
506 517 9.384764 GACAATTAGCTACTTCTTCCACTTAAT 57.615 33.333 0.00 0.00 0.00 1.40
507 518 9.740710 ACAATTAGCTACTTCTTCCACTTAATT 57.259 29.630 0.00 0.00 0.00 1.40
510 521 6.502136 AGCTACTTCTTCCACTTAATTTGC 57.498 37.500 0.00 0.00 0.00 3.68
511 522 6.241645 AGCTACTTCTTCCACTTAATTTGCT 58.758 36.000 0.00 0.00 0.00 3.91
512 523 6.717084 AGCTACTTCTTCCACTTAATTTGCTT 59.283 34.615 0.00 0.00 0.00 3.91
513 524 6.803807 GCTACTTCTTCCACTTAATTTGCTTG 59.196 38.462 0.00 0.00 0.00 4.01
514 525 5.532557 ACTTCTTCCACTTAATTTGCTTGC 58.467 37.500 0.00 0.00 0.00 4.01
515 526 5.068987 ACTTCTTCCACTTAATTTGCTTGCA 59.931 36.000 0.00 0.00 0.00 4.08
516 527 5.726980 TCTTCCACTTAATTTGCTTGCAT 57.273 34.783 0.00 0.00 0.00 3.96
517 528 6.100404 TCTTCCACTTAATTTGCTTGCATT 57.900 33.333 0.00 0.00 0.00 3.56
518 529 6.158598 TCTTCCACTTAATTTGCTTGCATTC 58.841 36.000 0.00 0.00 0.00 2.67
519 530 5.465532 TCCACTTAATTTGCTTGCATTCA 57.534 34.783 0.00 0.00 0.00 2.57
520 531 6.040209 TCCACTTAATTTGCTTGCATTCAT 57.960 33.333 0.00 0.00 0.00 2.57
521 532 6.101332 TCCACTTAATTTGCTTGCATTCATC 58.899 36.000 0.00 0.00 0.00 2.92
522 533 5.292589 CCACTTAATTTGCTTGCATTCATCC 59.707 40.000 0.00 0.00 0.00 3.51
523 534 5.870433 CACTTAATTTGCTTGCATTCATCCA 59.130 36.000 0.00 0.00 0.00 3.41
524 535 6.035650 CACTTAATTTGCTTGCATTCATCCAG 59.964 38.462 0.00 0.00 0.00 3.86
525 536 2.373540 TTTGCTTGCATTCATCCAGC 57.626 45.000 0.00 0.00 0.00 4.85
526 537 1.552578 TTGCTTGCATTCATCCAGCT 58.447 45.000 5.93 0.00 0.00 4.24
527 538 1.552578 TGCTTGCATTCATCCAGCTT 58.447 45.000 5.93 0.00 0.00 3.74
528 539 2.725637 TGCTTGCATTCATCCAGCTTA 58.274 42.857 5.93 0.00 0.00 3.09
529 540 3.293337 TGCTTGCATTCATCCAGCTTAT 58.707 40.909 5.93 0.00 0.00 1.73
530 541 3.702548 TGCTTGCATTCATCCAGCTTATT 59.297 39.130 5.93 0.00 0.00 1.40
531 542 4.888823 TGCTTGCATTCATCCAGCTTATTA 59.111 37.500 5.93 0.00 0.00 0.98
532 543 5.360429 TGCTTGCATTCATCCAGCTTATTAA 59.640 36.000 5.93 0.00 0.00 1.40
533 544 6.041182 TGCTTGCATTCATCCAGCTTATTAAT 59.959 34.615 5.93 0.00 0.00 1.40
534 545 6.365247 GCTTGCATTCATCCAGCTTATTAATG 59.635 38.462 0.00 7.78 0.00 1.90
535 546 7.585579 TTGCATTCATCCAGCTTATTAATGA 57.414 32.000 13.36 3.99 0.00 2.57
536 547 7.770366 TGCATTCATCCAGCTTATTAATGAT 57.230 32.000 13.36 0.00 0.00 2.45
537 548 7.823665 TGCATTCATCCAGCTTATTAATGATC 58.176 34.615 13.36 0.00 0.00 2.92
538 549 7.668469 TGCATTCATCCAGCTTATTAATGATCT 59.332 33.333 13.36 0.00 0.00 2.75
539 550 8.182881 GCATTCATCCAGCTTATTAATGATCTC 58.817 37.037 13.36 0.00 0.00 2.75
540 551 9.227777 CATTCATCCAGCTTATTAATGATCTCA 57.772 33.333 0.00 0.00 0.00 3.27
541 552 9.803507 ATTCATCCAGCTTATTAATGATCTCAA 57.196 29.630 0.00 0.00 0.00 3.02
542 553 9.631257 TTCATCCAGCTTATTAATGATCTCAAA 57.369 29.630 0.00 0.00 0.00 2.69
543 554 9.060347 TCATCCAGCTTATTAATGATCTCAAAC 57.940 33.333 0.00 0.00 0.00 2.93
544 555 7.482654 TCCAGCTTATTAATGATCTCAAACG 57.517 36.000 0.00 0.00 0.00 3.60
545 556 7.272244 TCCAGCTTATTAATGATCTCAAACGA 58.728 34.615 0.00 0.00 0.00 3.85
546 557 7.933577 TCCAGCTTATTAATGATCTCAAACGAT 59.066 33.333 0.00 0.00 0.00 3.73
547 558 8.013947 CCAGCTTATTAATGATCTCAAACGATG 58.986 37.037 0.00 0.00 0.00 3.84
548 559 8.768019 CAGCTTATTAATGATCTCAAACGATGA 58.232 33.333 0.00 0.00 36.38 2.92
549 560 8.768955 AGCTTATTAATGATCTCAAACGATGAC 58.231 33.333 0.00 0.00 33.47 3.06
550 561 8.768955 GCTTATTAATGATCTCAAACGATGACT 58.231 33.333 0.00 0.00 33.47 3.41
553 564 4.871993 ATGATCTCAAACGATGACTTGC 57.128 40.909 0.00 0.00 33.47 4.01
554 565 3.663025 TGATCTCAAACGATGACTTGCA 58.337 40.909 0.00 0.00 33.47 4.08
555 566 4.064388 TGATCTCAAACGATGACTTGCAA 58.936 39.130 0.00 0.00 33.47 4.08
556 567 4.514816 TGATCTCAAACGATGACTTGCAAA 59.485 37.500 0.00 0.00 33.47 3.68
578 589 7.687445 CAAAGCATGCATTAAATTTTACTCCC 58.313 34.615 21.98 0.00 0.00 4.30
579 590 6.796785 AGCATGCATTAAATTTTACTCCCT 57.203 33.333 21.98 0.00 0.00 4.20
580 591 6.809869 AGCATGCATTAAATTTTACTCCCTC 58.190 36.000 21.98 0.00 0.00 4.30
581 592 6.608808 AGCATGCATTAAATTTTACTCCCTCT 59.391 34.615 21.98 0.00 0.00 3.69
582 593 6.698766 GCATGCATTAAATTTTACTCCCTCTG 59.301 38.462 14.21 0.00 0.00 3.35
583 594 7.631377 GCATGCATTAAATTTTACTCCCTCTGT 60.631 37.037 14.21 0.00 0.00 3.41
584 595 7.775053 TGCATTAAATTTTACTCCCTCTGTT 57.225 32.000 0.00 0.00 0.00 3.16
585 596 8.189119 TGCATTAAATTTTACTCCCTCTGTTT 57.811 30.769 0.00 0.00 0.00 2.83
586 597 8.303876 TGCATTAAATTTTACTCCCTCTGTTTC 58.696 33.333 0.00 0.00 0.00 2.78
587 598 8.523658 GCATTAAATTTTACTCCCTCTGTTTCT 58.476 33.333 0.00 0.00 0.00 2.52
597 608 9.725206 TTACTCCCTCTGTTTCTAAATATAGGT 57.275 33.333 3.92 0.00 0.00 3.08
598 609 8.252624 ACTCCCTCTGTTTCTAAATATAGGTC 57.747 38.462 3.92 0.00 0.00 3.85
599 610 8.068733 ACTCCCTCTGTTTCTAAATATAGGTCT 58.931 37.037 3.92 0.00 0.00 3.85
600 611 8.855804 TCCCTCTGTTTCTAAATATAGGTCTT 57.144 34.615 3.92 0.00 0.00 3.01
601 612 9.280456 TCCCTCTGTTTCTAAATATAGGTCTTT 57.720 33.333 3.92 0.00 0.00 2.52
602 613 9.907229 CCCTCTGTTTCTAAATATAGGTCTTTT 57.093 33.333 3.92 0.00 0.00 2.27
637 648 8.777865 AAATATGGACTACATACGGATGAATG 57.222 34.615 16.36 6.19 44.41 2.67
638 649 5.808366 ATGGACTACATACGGATGAATGT 57.192 39.130 16.36 9.52 38.26 2.71
639 650 6.911250 ATGGACTACATACGGATGAATGTA 57.089 37.500 16.36 5.74 38.26 2.29
648 659 8.988064 ACATACGGATGAATGTAGACATATTC 57.012 34.615 16.36 0.00 34.61 1.75
649 660 8.807118 ACATACGGATGAATGTAGACATATTCT 58.193 33.333 16.36 0.00 34.61 2.40
650 661 9.080915 CATACGGATGAATGTAGACATATTCTG 57.919 37.037 0.00 2.08 34.36 3.02
651 662 6.459066 ACGGATGAATGTAGACATATTCTGG 58.541 40.000 0.00 0.00 34.36 3.86
652 663 6.267699 ACGGATGAATGTAGACATATTCTGGA 59.732 38.462 0.00 0.00 34.36 3.86
653 664 6.810676 CGGATGAATGTAGACATATTCTGGAG 59.189 42.308 0.00 0.00 34.36 3.86
654 665 7.524532 CGGATGAATGTAGACATATTCTGGAGT 60.525 40.741 0.00 0.00 34.36 3.85
655 666 7.601886 GGATGAATGTAGACATATTCTGGAGTG 59.398 40.741 0.00 0.00 34.36 3.51
656 667 7.423844 TGAATGTAGACATATTCTGGAGTGT 57.576 36.000 0.00 0.00 34.36 3.55
657 668 8.533569 TGAATGTAGACATATTCTGGAGTGTA 57.466 34.615 0.00 0.00 34.36 2.90
658 669 8.633561 TGAATGTAGACATATTCTGGAGTGTAG 58.366 37.037 0.00 0.00 34.36 2.74
659 670 8.768501 AATGTAGACATATTCTGGAGTGTAGA 57.231 34.615 0.00 0.00 35.10 2.59
660 671 8.948401 ATGTAGACATATTCTGGAGTGTAGAT 57.052 34.615 0.00 0.00 35.55 1.98
661 672 8.768501 TGTAGACATATTCTGGAGTGTAGATT 57.231 34.615 0.00 0.00 35.55 2.40
662 673 8.851145 TGTAGACATATTCTGGAGTGTAGATTC 58.149 37.037 0.00 0.00 35.55 2.52
663 674 7.904558 AGACATATTCTGGAGTGTAGATTCA 57.095 36.000 0.00 0.00 31.12 2.57
664 675 7.721402 AGACATATTCTGGAGTGTAGATTCAC 58.279 38.462 0.00 0.00 34.29 3.18
665 676 7.563188 AGACATATTCTGGAGTGTAGATTCACT 59.437 37.037 0.00 0.00 41.22 3.41
676 687 7.913674 AGTGTAGATTCACTCATTTTTCTCC 57.086 36.000 0.00 0.00 44.07 3.71
677 688 6.591834 AGTGTAGATTCACTCATTTTTCTCCG 59.408 38.462 0.00 0.00 44.07 4.63
678 689 6.369065 GTGTAGATTCACTCATTTTTCTCCGT 59.631 38.462 0.00 0.00 35.68 4.69
679 690 7.544566 GTGTAGATTCACTCATTTTTCTCCGTA 59.455 37.037 0.00 0.00 35.68 4.02
680 691 8.258007 TGTAGATTCACTCATTTTTCTCCGTAT 58.742 33.333 0.00 0.00 0.00 3.06
681 692 7.545362 AGATTCACTCATTTTTCTCCGTATG 57.455 36.000 0.00 0.00 0.00 2.39
682 693 7.106239 AGATTCACTCATTTTTCTCCGTATGT 58.894 34.615 0.00 0.00 0.00 2.29
686 697 7.033791 TCACTCATTTTTCTCCGTATGTAGAC 58.966 38.462 0.00 0.00 0.00 2.59
687 698 6.255887 CACTCATTTTTCTCCGTATGTAGACC 59.744 42.308 0.00 0.00 0.00 3.85
692 703 9.273016 CATTTTTCTCCGTATGTAGACCATATT 57.727 33.333 0.00 0.00 38.29 1.28
694 705 9.976511 TTTTTCTCCGTATGTAGACCATATTAG 57.023 33.333 0.00 0.00 38.29 1.73
695 706 8.929260 TTTCTCCGTATGTAGACCATATTAGA 57.071 34.615 0.00 0.00 38.29 2.10
699 710 8.289939 TCCGTATGTAGACCATATTAGAATCC 57.710 38.462 0.00 0.00 38.29 3.01
700 711 8.114102 TCCGTATGTAGACCATATTAGAATCCT 58.886 37.037 0.00 0.00 38.29 3.24
729 740 8.904099 AAAGACATATATTTAGAAACGGAGGG 57.096 34.615 0.00 0.00 0.00 4.30
730 741 7.005709 AGACATATATTTAGAAACGGAGGGG 57.994 40.000 0.00 0.00 0.00 4.79
731 742 6.013639 AGACATATATTTAGAAACGGAGGGGG 60.014 42.308 0.00 0.00 0.00 5.40
733 744 6.788957 ACATATATTTAGAAACGGAGGGGGTA 59.211 38.462 0.00 0.00 0.00 3.69
734 745 3.920231 ATTTAGAAACGGAGGGGGTAC 57.080 47.619 0.00 0.00 0.00 3.34
735 746 2.323999 TTAGAAACGGAGGGGGTACA 57.676 50.000 0.00 0.00 0.00 2.90
736 747 2.555732 TAGAAACGGAGGGGGTACAT 57.444 50.000 0.00 0.00 0.00 2.29
741 752 0.043032 ACGGAGGGGGTACATTGGTA 59.957 55.000 0.00 0.00 0.00 3.25
756 767 5.560724 ACATTGGTACATGTAAGCTGAGTT 58.439 37.500 7.25 0.00 39.30 3.01
757 768 6.003950 ACATTGGTACATGTAAGCTGAGTTT 58.996 36.000 7.25 0.00 39.30 2.66
758 769 5.940192 TTGGTACATGTAAGCTGAGTTTG 57.060 39.130 7.25 0.00 39.30 2.93
760 771 4.754618 TGGTACATGTAAGCTGAGTTTGTG 59.245 41.667 7.25 0.00 0.00 3.33
761 772 4.994852 GGTACATGTAAGCTGAGTTTGTGA 59.005 41.667 7.25 0.00 0.00 3.58
762 773 5.107065 GGTACATGTAAGCTGAGTTTGTGAC 60.107 44.000 7.25 0.00 0.00 3.67
763 774 3.815401 ACATGTAAGCTGAGTTTGTGACC 59.185 43.478 0.00 0.00 0.00 4.02
764 775 3.838244 TGTAAGCTGAGTTTGTGACCT 57.162 42.857 0.00 0.00 0.00 3.85
766 777 3.876914 TGTAAGCTGAGTTTGTGACCTTG 59.123 43.478 0.00 0.00 0.00 3.61
767 778 2.717639 AGCTGAGTTTGTGACCTTGT 57.282 45.000 0.00 0.00 0.00 3.16
768 779 3.838244 AGCTGAGTTTGTGACCTTGTA 57.162 42.857 0.00 0.00 0.00 2.41
769 780 4.357918 AGCTGAGTTTGTGACCTTGTAT 57.642 40.909 0.00 0.00 0.00 2.29
771 782 6.054860 AGCTGAGTTTGTGACCTTGTATAT 57.945 37.500 0.00 0.00 0.00 0.86
783 860 6.259387 GTGACCTTGTATATAAAAACGGAGGG 59.741 42.308 0.00 0.00 0.00 4.30
822 899 1.377690 TGGAGGGGATGTGGCTAAAA 58.622 50.000 0.00 0.00 0.00 1.52
839 916 5.056480 GCTAAAAAGCATTTGTTTGGAGGT 58.944 37.500 0.00 0.00 39.02 3.85
851 928 2.558359 GTTTGGAGGTCATGTTGGGAAG 59.442 50.000 0.00 0.00 0.00 3.46
853 930 2.061848 TGGAGGTCATGTTGGGAAGAA 58.938 47.619 0.00 0.00 0.00 2.52
890 968 0.301687 CGCAGCGTCGCATCTAAATT 59.698 50.000 21.09 0.00 0.00 1.82
1054 1136 4.218686 ACCACCACCAACCAGCCC 62.219 66.667 0.00 0.00 0.00 5.19
1881 1966 2.579201 CTCCGCCTCGTGGACAAT 59.421 61.111 7.92 0.00 37.29 2.71
1983 2068 1.375396 CGCCATGGACTCCGTCAAA 60.375 57.895 18.40 0.00 33.68 2.69
2077 2162 4.202574 CCACCACCAGCCACCACA 62.203 66.667 0.00 0.00 0.00 4.17
2176 2270 2.073101 CCCAAGTAGCCTCCTCCCC 61.073 68.421 0.00 0.00 0.00 4.81
2193 2287 3.350163 CCCCCTCCCACATGCCTT 61.350 66.667 0.00 0.00 0.00 4.35
2263 2369 7.279981 TGCTGGTCTTATACATTGTGTTGTATC 59.720 37.037 0.00 0.00 40.93 2.24
2270 2376 9.817809 CTTATACATTGTGTTGTATCCTACTGT 57.182 33.333 0.00 0.00 40.93 3.55
2273 2379 7.241042 ACATTGTGTTGTATCCTACTGTAGT 57.759 36.000 13.42 0.00 0.00 2.73
2274 2380 8.357290 ACATTGTGTTGTATCCTACTGTAGTA 57.643 34.615 13.42 0.00 0.00 1.82
2275 2381 8.809066 ACATTGTGTTGTATCCTACTGTAGTAA 58.191 33.333 13.42 2.30 0.00 2.24
2357 2466 6.763135 CACCGAATTATGGATGTATATGGGAG 59.237 42.308 3.31 0.00 0.00 4.30
2390 2499 4.510038 ACTTGAATTGACATTGGAGTGC 57.490 40.909 0.00 0.00 0.00 4.40
2458 2567 4.986783 ACAGTGAGGATATCTCGTGGATA 58.013 43.478 2.05 4.08 45.32 2.59
2467 2577 7.967908 AGGATATCTCGTGGATAATTTCAGTT 58.032 34.615 2.05 0.00 39.94 3.16
2469 2579 8.713271 GGATATCTCGTGGATAATTTCAGTTTC 58.287 37.037 2.05 0.00 39.94 2.78
2535 2645 2.438411 TGTCGCCCCAAATATTTCGTT 58.562 42.857 0.00 0.00 0.00 3.85
2536 2646 2.162608 TGTCGCCCCAAATATTTCGTTG 59.837 45.455 0.00 0.00 0.00 4.10
2543 2653 4.700213 CCCCAAATATTTCGTTGAGTGACT 59.300 41.667 0.00 0.00 0.00 3.41
2619 2729 1.277557 ACCTGTGCTCCTCTGTTCATC 59.722 52.381 0.00 0.00 0.00 2.92
2630 2740 3.000727 CTCTGTTCATCCGGTTGGTAAC 58.999 50.000 12.54 10.62 36.30 2.50
2807 2917 6.264518 TGATCATCATTAAGCAAGCATGACAT 59.735 34.615 0.00 0.00 29.74 3.06
2808 2918 6.459670 TCATCATTAAGCAAGCATGACATT 57.540 33.333 0.00 0.00 29.74 2.71
2809 2919 6.270064 TCATCATTAAGCAAGCATGACATTG 58.730 36.000 0.00 0.00 29.74 2.82
2810 2920 5.900865 TCATTAAGCAAGCATGACATTGA 57.099 34.783 0.00 0.00 0.00 2.57
2811 2921 5.643664 TCATTAAGCAAGCATGACATTGAC 58.356 37.500 0.00 0.00 0.00 3.18
2812 2922 5.183522 TCATTAAGCAAGCATGACATTGACA 59.816 36.000 0.00 0.00 0.00 3.58
2835 2945 2.229792 GTCAGCAAGTCATCCAACCAA 58.770 47.619 0.00 0.00 0.00 3.67
2909 3033 8.120465 GTGTGAAAAATTCAGACGTTTTAGAGA 58.880 33.333 4.87 0.00 42.84 3.10
2953 3077 3.303329 CGTCGATGATTTGCCAATACCAG 60.303 47.826 0.00 0.00 0.00 4.00
2957 3081 4.336433 CGATGATTTGCCAATACCAGTCTT 59.664 41.667 0.00 0.00 0.00 3.01
2960 3084 4.701651 TGATTTGCCAATACCAGTCTTCTG 59.298 41.667 0.00 0.00 41.01 3.02
2961 3085 4.365514 TTTGCCAATACCAGTCTTCTGA 57.634 40.909 0.00 0.00 43.76 3.27
3031 3160 4.454728 TGATTTTTGCAGAACCTATGGC 57.545 40.909 0.00 0.00 0.00 4.40
3057 3186 1.203288 TCATTGGATTGTTTGCCCCCT 60.203 47.619 0.00 0.00 0.00 4.79
3060 3189 2.704190 TGGATTGTTTGCCCCCTTTA 57.296 45.000 0.00 0.00 0.00 1.85
3063 3192 4.889780 TGGATTGTTTGCCCCCTTTATAT 58.110 39.130 0.00 0.00 0.00 0.86
3130 3259 2.202932 CATCCGCTCCAACCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.038744 CCCCATGTCAAGGAGCACTT 59.961 55.000 0.00 0.00 41.00 3.16
1 2 0.842030 TCCCCATGTCAAGGAGCACT 60.842 55.000 0.00 0.00 0.00 4.40
2 3 0.038166 TTCCCCATGTCAAGGAGCAC 59.962 55.000 0.00 0.00 0.00 4.40
3 4 0.329261 CTTCCCCATGTCAAGGAGCA 59.671 55.000 0.00 0.00 0.00 4.26
4 5 1.034292 GCTTCCCCATGTCAAGGAGC 61.034 60.000 0.00 0.00 0.00 4.70
5 6 0.329261 TGCTTCCCCATGTCAAGGAG 59.671 55.000 0.00 0.00 0.00 3.69
6 7 0.329261 CTGCTTCCCCATGTCAAGGA 59.671 55.000 0.00 0.00 0.00 3.36
7 8 0.682209 CCTGCTTCCCCATGTCAAGG 60.682 60.000 0.00 0.00 0.00 3.61
8 9 1.318158 GCCTGCTTCCCCATGTCAAG 61.318 60.000 0.00 0.00 0.00 3.02
9 10 1.304381 GCCTGCTTCCCCATGTCAA 60.304 57.895 0.00 0.00 0.00 3.18
10 11 0.913934 TAGCCTGCTTCCCCATGTCA 60.914 55.000 0.00 0.00 0.00 3.58
11 12 0.475906 ATAGCCTGCTTCCCCATGTC 59.524 55.000 0.00 0.00 0.00 3.06
12 13 0.184451 CATAGCCTGCTTCCCCATGT 59.816 55.000 0.00 0.00 0.00 3.21
13 14 3.031916 CATAGCCTGCTTCCCCATG 57.968 57.895 0.00 0.00 0.00 3.66
23 24 2.617308 CAAGTTCTGGATGCATAGCCTG 59.383 50.000 0.00 1.76 32.18 4.85
24 25 2.928334 CAAGTTCTGGATGCATAGCCT 58.072 47.619 0.00 0.00 32.18 4.58
49 50 1.861542 TTTGGGAAGCAACGATGGCG 61.862 55.000 0.00 0.00 44.79 5.69
50 51 0.532115 ATTTGGGAAGCAACGATGGC 59.468 50.000 0.00 0.00 0.00 4.40
51 52 1.545582 ACATTTGGGAAGCAACGATGG 59.454 47.619 0.00 0.00 0.00 3.51
52 53 2.228582 TGACATTTGGGAAGCAACGATG 59.771 45.455 0.00 0.00 0.00 3.84
53 54 2.228822 GTGACATTTGGGAAGCAACGAT 59.771 45.455 0.00 0.00 0.00 3.73
54 55 1.606668 GTGACATTTGGGAAGCAACGA 59.393 47.619 0.00 0.00 0.00 3.85
55 56 1.608590 AGTGACATTTGGGAAGCAACG 59.391 47.619 0.00 0.00 0.00 4.10
56 57 2.288395 CCAGTGACATTTGGGAAGCAAC 60.288 50.000 0.00 0.00 0.00 4.17
57 58 1.962807 CCAGTGACATTTGGGAAGCAA 59.037 47.619 0.00 0.00 0.00 3.91
58 59 1.144708 TCCAGTGACATTTGGGAAGCA 59.855 47.619 8.57 0.00 35.13 3.91
59 60 1.815003 CTCCAGTGACATTTGGGAAGC 59.185 52.381 8.57 0.00 35.13 3.86
60 61 1.815003 GCTCCAGTGACATTTGGGAAG 59.185 52.381 8.57 2.59 35.13 3.46
61 62 1.425066 AGCTCCAGTGACATTTGGGAA 59.575 47.619 8.57 0.00 35.13 3.97
62 63 1.003580 GAGCTCCAGTGACATTTGGGA 59.996 52.381 0.87 0.00 35.13 4.37
63 64 1.457346 GAGCTCCAGTGACATTTGGG 58.543 55.000 0.87 2.62 35.13 4.12
64 65 1.457346 GGAGCTCCAGTGACATTTGG 58.543 55.000 28.43 3.22 35.64 3.28
65 66 1.081892 CGGAGCTCCAGTGACATTTG 58.918 55.000 31.67 8.04 35.14 2.32
66 67 3.540211 CGGAGCTCCAGTGACATTT 57.460 52.632 31.67 0.00 35.14 2.32
90 91 3.640000 GATCATTCCGCCGCCACG 61.640 66.667 0.00 0.00 0.00 4.94
91 92 3.640000 CGATCATTCCGCCGCCAC 61.640 66.667 0.00 0.00 0.00 5.01
92 93 4.908687 CCGATCATTCCGCCGCCA 62.909 66.667 0.00 0.00 0.00 5.69
94 95 3.858868 TAGCCGATCATTCCGCCGC 62.859 63.158 0.00 0.00 0.00 6.53
95 96 1.079819 ATAGCCGATCATTCCGCCG 60.080 57.895 0.00 0.00 0.00 6.46
96 97 1.021390 CCATAGCCGATCATTCCGCC 61.021 60.000 0.00 0.00 0.00 6.13
97 98 0.037326 TCCATAGCCGATCATTCCGC 60.037 55.000 0.00 0.00 0.00 5.54
98 99 2.001812 CTCCATAGCCGATCATTCCG 57.998 55.000 0.00 0.00 0.00 4.30
99 100 1.731720 GCTCCATAGCCGATCATTCC 58.268 55.000 0.00 0.00 43.40 3.01
110 111 1.365633 GGTCGCAGGAGCTCCATAG 59.634 63.158 33.90 22.95 39.10 2.23
111 112 2.490148 CGGTCGCAGGAGCTCCATA 61.490 63.158 33.90 13.47 38.53 2.74
112 113 3.842923 CGGTCGCAGGAGCTCCAT 61.843 66.667 33.90 16.57 38.53 3.41
115 116 3.477224 CTAGCGGTCGCAGGAGCTC 62.477 68.421 17.71 4.71 44.88 4.09
116 117 3.522731 CTAGCGGTCGCAGGAGCT 61.523 66.667 17.71 0.00 44.88 4.09
117 118 4.577246 CCTAGCGGTCGCAGGAGC 62.577 72.222 20.77 0.00 44.88 4.70
118 119 3.905678 CCCTAGCGGTCGCAGGAG 61.906 72.222 24.42 15.75 44.88 3.69
124 125 4.077184 TTGGTGCCCTAGCGGTCG 62.077 66.667 0.00 0.00 44.31 4.79
125 126 1.610554 TACTTGGTGCCCTAGCGGTC 61.611 60.000 0.00 0.00 44.31 4.79
126 127 1.611261 TACTTGGTGCCCTAGCGGT 60.611 57.895 0.00 0.00 44.31 5.68
127 128 1.144057 CTACTTGGTGCCCTAGCGG 59.856 63.158 3.33 0.00 44.31 5.52
128 129 0.179108 GTCTACTTGGTGCCCTAGCG 60.179 60.000 3.33 0.00 44.31 4.26
129 130 0.179108 CGTCTACTTGGTGCCCTAGC 60.179 60.000 3.33 0.00 40.48 3.42
130 131 0.179108 GCGTCTACTTGGTGCCCTAG 60.179 60.000 2.13 2.13 32.84 3.02
131 132 1.895238 GCGTCTACTTGGTGCCCTA 59.105 57.895 0.00 0.00 0.00 3.53
132 133 2.663196 GCGTCTACTTGGTGCCCT 59.337 61.111 0.00 0.00 0.00 5.19
133 134 2.813908 CGCGTCTACTTGGTGCCC 60.814 66.667 0.00 0.00 0.00 5.36
134 135 2.813908 CCGCGTCTACTTGGTGCC 60.814 66.667 4.92 0.00 0.00 5.01
135 136 3.488090 GCCGCGTCTACTTGGTGC 61.488 66.667 4.92 0.00 0.00 5.01
136 137 3.179265 CGCCGCGTCTACTTGGTG 61.179 66.667 4.92 0.00 0.00 4.17
137 138 2.221906 ATTCGCCGCGTCTACTTGGT 62.222 55.000 13.39 0.00 0.00 3.67
138 139 1.082117 AATTCGCCGCGTCTACTTGG 61.082 55.000 13.39 0.00 0.00 3.61
139 140 0.025001 CAATTCGCCGCGTCTACTTG 59.975 55.000 13.39 6.86 0.00 3.16
140 141 1.082117 CCAATTCGCCGCGTCTACTT 61.082 55.000 13.39 0.00 0.00 2.24
141 142 1.518572 CCAATTCGCCGCGTCTACT 60.519 57.895 13.39 0.00 0.00 2.57
142 143 3.003478 CCAATTCGCCGCGTCTAC 58.997 61.111 13.39 0.00 0.00 2.59
143 144 2.888534 GCCAATTCGCCGCGTCTA 60.889 61.111 13.39 0.00 0.00 2.59
145 146 4.520846 CTGCCAATTCGCCGCGTC 62.521 66.667 13.39 0.00 0.00 5.19
149 150 2.971744 GATTCGCTGCCAATTCGCCG 62.972 60.000 0.00 0.00 0.00 6.46
150 151 1.298638 GATTCGCTGCCAATTCGCC 60.299 57.895 0.00 0.00 0.00 5.54
151 152 1.652329 CGATTCGCTGCCAATTCGC 60.652 57.895 0.00 0.00 0.00 4.70
152 153 0.315382 GTCGATTCGCTGCCAATTCG 60.315 55.000 0.00 1.53 0.00 3.34
153 154 0.315382 CGTCGATTCGCTGCCAATTC 60.315 55.000 0.00 0.00 0.00 2.17
154 155 1.715585 CGTCGATTCGCTGCCAATT 59.284 52.632 0.00 0.00 0.00 2.32
155 156 3.398920 CGTCGATTCGCTGCCAAT 58.601 55.556 0.00 0.00 0.00 3.16
183 184 2.624437 ATTTAGCCTCCGACCGCGTC 62.624 60.000 4.92 1.63 35.23 5.19
184 185 2.718073 ATTTAGCCTCCGACCGCGT 61.718 57.895 4.92 0.00 35.23 6.01
185 186 2.106332 ATTTAGCCTCCGACCGCG 59.894 61.111 0.00 0.00 37.24 6.46
186 187 1.887707 CCATTTAGCCTCCGACCGC 60.888 63.158 0.00 0.00 0.00 5.68
187 188 1.227556 CCCATTTAGCCTCCGACCG 60.228 63.158 0.00 0.00 0.00 4.79
188 189 1.148498 CCCCATTTAGCCTCCGACC 59.852 63.158 0.00 0.00 0.00 4.79
189 190 1.148498 CCCCCATTTAGCCTCCGAC 59.852 63.158 0.00 0.00 0.00 4.79
190 191 1.307517 ACCCCCATTTAGCCTCCGA 60.308 57.895 0.00 0.00 0.00 4.55
191 192 1.152963 CACCCCCATTTAGCCTCCG 60.153 63.158 0.00 0.00 0.00 4.63
192 193 1.230212 CCACCCCCATTTAGCCTCC 59.770 63.158 0.00 0.00 0.00 4.30
193 194 0.183731 CTCCACCCCCATTTAGCCTC 59.816 60.000 0.00 0.00 0.00 4.70
194 195 1.289244 CCTCCACCCCCATTTAGCCT 61.289 60.000 0.00 0.00 0.00 4.58
195 196 1.230212 CCTCCACCCCCATTTAGCC 59.770 63.158 0.00 0.00 0.00 3.93
196 197 1.455773 GCCTCCACCCCCATTTAGC 60.456 63.158 0.00 0.00 0.00 3.09
197 198 0.334676 TTGCCTCCACCCCCATTTAG 59.665 55.000 0.00 0.00 0.00 1.85
198 199 0.787084 TTTGCCTCCACCCCCATTTA 59.213 50.000 0.00 0.00 0.00 1.40
199 200 0.545071 CTTTGCCTCCACCCCCATTT 60.545 55.000 0.00 0.00 0.00 2.32
200 201 1.079073 CTTTGCCTCCACCCCCATT 59.921 57.895 0.00 0.00 0.00 3.16
201 202 2.772924 CTTTGCCTCCACCCCCAT 59.227 61.111 0.00 0.00 0.00 4.00
202 203 4.299796 GCTTTGCCTCCACCCCCA 62.300 66.667 0.00 0.00 0.00 4.96
213 214 4.842091 CGATGCTGCGGGCTTTGC 62.842 66.667 0.00 0.00 42.39 3.68
247 248 2.817844 GGACGTTTTTAGGGCATGAAGT 59.182 45.455 0.00 0.00 0.00 3.01
262 263 3.305720 TCTCCTGCCATATTAGGACGTT 58.694 45.455 0.00 0.00 38.15 3.99
266 267 3.988976 GCATCTCCTGCCATATTAGGA 57.011 47.619 0.00 0.00 45.66 2.94
333 344 9.940974 TTGTATAACTAAATGGAGGGAGTACTA 57.059 33.333 0.00 0.00 0.00 1.82
338 349 7.138054 ACCTTGTATAACTAAATGGAGGGAG 57.862 40.000 0.00 0.00 0.00 4.30
372 383 8.526147 GGCCTTGTATAGATGCAAAATGAATAT 58.474 33.333 0.00 0.00 32.12 1.28
374 385 6.324512 TGGCCTTGTATAGATGCAAAATGAAT 59.675 34.615 3.32 0.00 32.12 2.57
375 386 5.655974 TGGCCTTGTATAGATGCAAAATGAA 59.344 36.000 3.32 0.00 32.12 2.57
376 387 5.199723 TGGCCTTGTATAGATGCAAAATGA 58.800 37.500 3.32 0.00 32.12 2.57
377 388 5.518848 TGGCCTTGTATAGATGCAAAATG 57.481 39.130 3.32 0.00 32.12 2.32
378 389 5.834742 TGATGGCCTTGTATAGATGCAAAAT 59.165 36.000 3.32 0.00 32.12 1.82
379 390 5.199723 TGATGGCCTTGTATAGATGCAAAA 58.800 37.500 3.32 0.00 32.12 2.44
380 391 4.790937 TGATGGCCTTGTATAGATGCAAA 58.209 39.130 3.32 0.00 32.12 3.68
381 392 4.436113 TGATGGCCTTGTATAGATGCAA 57.564 40.909 3.32 0.00 0.00 4.08
382 393 4.136796 GTTGATGGCCTTGTATAGATGCA 58.863 43.478 3.32 0.00 0.00 3.96
383 394 4.136796 TGTTGATGGCCTTGTATAGATGC 58.863 43.478 3.32 0.00 0.00 3.91
384 395 5.371526 ACTGTTGATGGCCTTGTATAGATG 58.628 41.667 3.32 0.00 0.00 2.90
385 396 5.636903 ACTGTTGATGGCCTTGTATAGAT 57.363 39.130 3.32 0.00 0.00 1.98
386 397 6.553953 TTACTGTTGATGGCCTTGTATAGA 57.446 37.500 3.32 0.00 0.00 1.98
387 398 6.992123 TGATTACTGTTGATGGCCTTGTATAG 59.008 38.462 3.32 0.00 0.00 1.31
388 399 6.894682 TGATTACTGTTGATGGCCTTGTATA 58.105 36.000 3.32 0.00 0.00 1.47
391 402 4.032960 TGATTACTGTTGATGGCCTTGT 57.967 40.909 3.32 0.00 0.00 3.16
392 403 4.142315 CCTTGATTACTGTTGATGGCCTTG 60.142 45.833 3.32 0.00 0.00 3.61
396 407 2.754552 TGCCTTGATTACTGTTGATGGC 59.245 45.455 0.00 0.00 38.42 4.40
398 409 7.894376 AATTTTGCCTTGATTACTGTTGATG 57.106 32.000 0.00 0.00 0.00 3.07
400 411 9.421806 CATTAATTTTGCCTTGATTACTGTTGA 57.578 29.630 0.00 0.00 0.00 3.18
423 434 7.441458 GGGTTGCTAGTACGAGAAAATATCATT 59.559 37.037 7.23 0.00 0.00 2.57
426 437 6.278363 TGGGTTGCTAGTACGAGAAAATATC 58.722 40.000 7.23 0.00 0.00 1.63
427 438 6.229936 TGGGTTGCTAGTACGAGAAAATAT 57.770 37.500 7.23 0.00 0.00 1.28
428 439 5.664294 TGGGTTGCTAGTACGAGAAAATA 57.336 39.130 7.23 0.00 0.00 1.40
429 440 4.546829 TGGGTTGCTAGTACGAGAAAAT 57.453 40.909 7.23 0.00 0.00 1.82
430 441 4.546829 ATGGGTTGCTAGTACGAGAAAA 57.453 40.909 7.23 0.00 0.00 2.29
431 442 4.546829 AATGGGTTGCTAGTACGAGAAA 57.453 40.909 7.23 0.00 0.00 2.52
432 443 4.546829 AAATGGGTTGCTAGTACGAGAA 57.453 40.909 7.23 0.00 0.00 2.87
433 444 5.664294 TTAAATGGGTTGCTAGTACGAGA 57.336 39.130 7.23 0.00 0.00 4.04
434 445 7.208080 AGTATTAAATGGGTTGCTAGTACGAG 58.792 38.462 0.00 0.00 0.00 4.18
435 446 7.116075 AGTATTAAATGGGTTGCTAGTACGA 57.884 36.000 0.00 0.00 0.00 3.43
436 447 7.627340 CAAGTATTAAATGGGTTGCTAGTACG 58.373 38.462 0.00 0.00 0.00 3.67
437 448 7.066525 TGCAAGTATTAAATGGGTTGCTAGTAC 59.933 37.037 6.44 0.00 40.71 2.73
438 449 7.113437 TGCAAGTATTAAATGGGTTGCTAGTA 58.887 34.615 6.44 0.00 40.71 1.82
439 450 5.949354 TGCAAGTATTAAATGGGTTGCTAGT 59.051 36.000 6.44 0.00 40.71 2.57
440 451 6.449635 TGCAAGTATTAAATGGGTTGCTAG 57.550 37.500 6.44 0.00 40.71 3.42
441 452 6.379703 ACATGCAAGTATTAAATGGGTTGCTA 59.620 34.615 0.00 0.00 40.71 3.49
442 453 5.187576 ACATGCAAGTATTAAATGGGTTGCT 59.812 36.000 0.00 0.00 40.71 3.91
443 454 5.418676 ACATGCAAGTATTAAATGGGTTGC 58.581 37.500 0.00 0.00 40.53 4.17
444 455 9.677567 GTATACATGCAAGTATTAAATGGGTTG 57.322 33.333 18.79 0.00 36.23 3.77
445 456 8.564574 CGTATACATGCAAGTATTAAATGGGTT 58.435 33.333 18.79 0.00 36.23 4.11
446 457 7.174253 CCGTATACATGCAAGTATTAAATGGGT 59.826 37.037 18.79 0.00 36.23 4.51
447 458 7.174253 ACCGTATACATGCAAGTATTAAATGGG 59.826 37.037 18.79 12.99 36.23 4.00
448 459 8.094798 ACCGTATACATGCAAGTATTAAATGG 57.905 34.615 18.79 16.78 36.23 3.16
449 460 8.769891 TGACCGTATACATGCAAGTATTAAATG 58.230 33.333 18.79 7.55 36.23 2.32
450 461 8.896320 TGACCGTATACATGCAAGTATTAAAT 57.104 30.769 18.79 4.49 36.23 1.40
451 462 8.896320 ATGACCGTATACATGCAAGTATTAAA 57.104 30.769 18.79 0.00 36.23 1.52
452 463 9.984190 TTATGACCGTATACATGCAAGTATTAA 57.016 29.630 18.79 7.71 36.23 1.40
454 465 8.935844 CATTATGACCGTATACATGCAAGTATT 58.064 33.333 18.79 2.02 36.23 1.89
455 466 8.311109 TCATTATGACCGTATACATGCAAGTAT 58.689 33.333 17.81 17.81 38.24 2.12
456 467 7.597369 GTCATTATGACCGTATACATGCAAGTA 59.403 37.037 13.92 3.98 41.37 2.24
457 468 6.423905 GTCATTATGACCGTATACATGCAAGT 59.576 38.462 13.92 0.00 41.37 3.16
458 469 6.423604 TGTCATTATGACCGTATACATGCAAG 59.576 38.462 20.91 0.00 46.40 4.01
459 470 6.284459 TGTCATTATGACCGTATACATGCAA 58.716 36.000 20.91 0.00 46.40 4.08
460 471 5.848406 TGTCATTATGACCGTATACATGCA 58.152 37.500 20.91 0.00 46.40 3.96
461 472 6.779115 TTGTCATTATGACCGTATACATGC 57.221 37.500 20.91 0.00 46.40 4.06
463 474 9.151471 GCTAATTGTCATTATGACCGTATACAT 57.849 33.333 20.91 3.59 46.40 2.29
464 475 8.364894 AGCTAATTGTCATTATGACCGTATACA 58.635 33.333 20.91 0.01 46.40 2.29
465 476 8.758633 AGCTAATTGTCATTATGACCGTATAC 57.241 34.615 20.91 8.25 46.40 1.47
466 477 9.850628 GTAGCTAATTGTCATTATGACCGTATA 57.149 33.333 20.91 9.19 46.40 1.47
467 478 8.585881 AGTAGCTAATTGTCATTATGACCGTAT 58.414 33.333 20.91 10.06 46.40 3.06
468 479 7.948357 AGTAGCTAATTGTCATTATGACCGTA 58.052 34.615 20.91 10.21 46.40 4.02
469 480 6.817184 AGTAGCTAATTGTCATTATGACCGT 58.183 36.000 20.91 8.10 46.40 4.83
470 481 7.653713 AGAAGTAGCTAATTGTCATTATGACCG 59.346 37.037 20.91 7.00 46.40 4.79
471 482 8.894768 AGAAGTAGCTAATTGTCATTATGACC 57.105 34.615 20.91 5.99 46.40 4.02
473 484 9.547753 GGAAGAAGTAGCTAATTGTCATTATGA 57.452 33.333 11.80 0.00 0.00 2.15
474 485 9.330063 TGGAAGAAGTAGCTAATTGTCATTATG 57.670 33.333 11.80 0.00 0.00 1.90
475 486 9.331282 GTGGAAGAAGTAGCTAATTGTCATTAT 57.669 33.333 11.80 0.00 0.00 1.28
476 487 8.540388 AGTGGAAGAAGTAGCTAATTGTCATTA 58.460 33.333 11.80 0.00 0.00 1.90
477 488 7.398024 AGTGGAAGAAGTAGCTAATTGTCATT 58.602 34.615 11.80 0.94 0.00 2.57
478 489 6.951971 AGTGGAAGAAGTAGCTAATTGTCAT 58.048 36.000 11.80 0.00 0.00 3.06
479 490 6.360370 AGTGGAAGAAGTAGCTAATTGTCA 57.640 37.500 11.80 0.00 0.00 3.58
480 491 8.773404 TTAAGTGGAAGAAGTAGCTAATTGTC 57.227 34.615 11.80 8.24 0.00 3.18
481 492 9.740710 AATTAAGTGGAAGAAGTAGCTAATTGT 57.259 29.630 11.80 4.18 0.00 2.71
484 495 8.678199 GCAAATTAAGTGGAAGAAGTAGCTAAT 58.322 33.333 0.00 0.00 0.00 1.73
485 496 7.883311 AGCAAATTAAGTGGAAGAAGTAGCTAA 59.117 33.333 0.00 0.00 0.00 3.09
486 497 7.394816 AGCAAATTAAGTGGAAGAAGTAGCTA 58.605 34.615 0.00 0.00 0.00 3.32
487 498 6.241645 AGCAAATTAAGTGGAAGAAGTAGCT 58.758 36.000 0.00 0.00 0.00 3.32
488 499 6.502136 AGCAAATTAAGTGGAAGAAGTAGC 57.498 37.500 0.00 0.00 0.00 3.58
489 500 6.803807 GCAAGCAAATTAAGTGGAAGAAGTAG 59.196 38.462 0.00 0.00 0.00 2.57
490 501 6.264292 TGCAAGCAAATTAAGTGGAAGAAGTA 59.736 34.615 0.00 0.00 0.00 2.24
491 502 5.068987 TGCAAGCAAATTAAGTGGAAGAAGT 59.931 36.000 0.00 0.00 0.00 3.01
492 503 5.531634 TGCAAGCAAATTAAGTGGAAGAAG 58.468 37.500 0.00 0.00 0.00 2.85
493 504 5.528043 TGCAAGCAAATTAAGTGGAAGAA 57.472 34.783 0.00 0.00 0.00 2.52
494 505 5.726980 ATGCAAGCAAATTAAGTGGAAGA 57.273 34.783 0.00 0.00 0.00 2.87
495 506 5.927689 TGAATGCAAGCAAATTAAGTGGAAG 59.072 36.000 0.00 0.00 0.00 3.46
496 507 5.851720 TGAATGCAAGCAAATTAAGTGGAA 58.148 33.333 0.00 0.00 0.00 3.53
497 508 5.465532 TGAATGCAAGCAAATTAAGTGGA 57.534 34.783 0.00 0.00 0.00 4.02
498 509 5.292589 GGATGAATGCAAGCAAATTAAGTGG 59.707 40.000 0.00 0.00 0.00 4.00
499 510 5.870433 TGGATGAATGCAAGCAAATTAAGTG 59.130 36.000 0.00 0.00 0.00 3.16
500 511 6.040209 TGGATGAATGCAAGCAAATTAAGT 57.960 33.333 0.00 0.00 0.00 2.24
501 512 5.006358 GCTGGATGAATGCAAGCAAATTAAG 59.994 40.000 0.00 0.00 0.00 1.85
502 513 4.871557 GCTGGATGAATGCAAGCAAATTAA 59.128 37.500 0.00 0.00 0.00 1.40
503 514 4.160814 AGCTGGATGAATGCAAGCAAATTA 59.839 37.500 7.03 0.00 0.00 1.40
504 515 3.055385 AGCTGGATGAATGCAAGCAAATT 60.055 39.130 7.03 0.00 0.00 1.82
505 516 2.500098 AGCTGGATGAATGCAAGCAAAT 59.500 40.909 7.03 0.00 0.00 2.32
506 517 1.897133 AGCTGGATGAATGCAAGCAAA 59.103 42.857 7.03 0.00 0.00 3.68
507 518 1.552578 AGCTGGATGAATGCAAGCAA 58.447 45.000 7.03 0.00 0.00 3.91
508 519 1.552578 AAGCTGGATGAATGCAAGCA 58.447 45.000 7.03 0.00 0.00 3.91
509 520 4.317671 AATAAGCTGGATGAATGCAAGC 57.682 40.909 0.00 0.00 0.00 4.01
510 521 7.654568 TCATTAATAAGCTGGATGAATGCAAG 58.345 34.615 11.73 0.00 0.00 4.01
511 522 7.585579 TCATTAATAAGCTGGATGAATGCAA 57.414 32.000 11.73 0.00 0.00 4.08
512 523 7.668469 AGATCATTAATAAGCTGGATGAATGCA 59.332 33.333 11.73 0.00 31.29 3.96
513 524 8.053026 AGATCATTAATAAGCTGGATGAATGC 57.947 34.615 11.73 3.01 31.29 3.56
514 525 9.227777 TGAGATCATTAATAAGCTGGATGAATG 57.772 33.333 10.79 10.79 31.29 2.67
515 526 9.803507 TTGAGATCATTAATAAGCTGGATGAAT 57.196 29.630 0.00 0.00 31.29 2.57
516 527 9.631257 TTTGAGATCATTAATAAGCTGGATGAA 57.369 29.630 0.00 0.00 31.29 2.57
517 528 9.060347 GTTTGAGATCATTAATAAGCTGGATGA 57.940 33.333 0.00 0.00 0.00 2.92
518 529 8.013947 CGTTTGAGATCATTAATAAGCTGGATG 58.986 37.037 0.00 0.00 0.00 3.51
519 530 7.933577 TCGTTTGAGATCATTAATAAGCTGGAT 59.066 33.333 0.00 0.00 0.00 3.41
520 531 7.272244 TCGTTTGAGATCATTAATAAGCTGGA 58.728 34.615 0.00 0.00 0.00 3.86
521 532 7.482654 TCGTTTGAGATCATTAATAAGCTGG 57.517 36.000 0.00 0.00 0.00 4.85
522 533 8.768019 TCATCGTTTGAGATCATTAATAAGCTG 58.232 33.333 0.00 0.00 0.00 4.24
523 534 8.768955 GTCATCGTTTGAGATCATTAATAAGCT 58.231 33.333 0.00 0.00 34.17 3.74
524 535 8.768955 AGTCATCGTTTGAGATCATTAATAAGC 58.231 33.333 0.00 0.00 34.17 3.09
527 538 8.551205 GCAAGTCATCGTTTGAGATCATTAATA 58.449 33.333 0.00 0.00 34.17 0.98
528 539 7.066163 TGCAAGTCATCGTTTGAGATCATTAAT 59.934 33.333 0.00 0.00 34.17 1.40
529 540 6.371271 TGCAAGTCATCGTTTGAGATCATTAA 59.629 34.615 0.00 0.00 34.17 1.40
530 541 5.874261 TGCAAGTCATCGTTTGAGATCATTA 59.126 36.000 0.00 0.00 34.17 1.90
531 542 4.696877 TGCAAGTCATCGTTTGAGATCATT 59.303 37.500 0.00 0.00 34.17 2.57
532 543 4.256110 TGCAAGTCATCGTTTGAGATCAT 58.744 39.130 0.00 0.00 34.17 2.45
533 544 3.663025 TGCAAGTCATCGTTTGAGATCA 58.337 40.909 0.00 0.00 34.17 2.92
534 545 4.668576 TTGCAAGTCATCGTTTGAGATC 57.331 40.909 0.00 0.00 34.17 2.75
535 546 4.614535 GCTTTGCAAGTCATCGTTTGAGAT 60.615 41.667 0.00 0.00 34.17 2.75
536 547 3.303990 GCTTTGCAAGTCATCGTTTGAGA 60.304 43.478 0.00 0.00 34.17 3.27
537 548 2.975851 GCTTTGCAAGTCATCGTTTGAG 59.024 45.455 0.00 0.00 34.17 3.02
538 549 2.357323 TGCTTTGCAAGTCATCGTTTGA 59.643 40.909 0.00 0.00 34.76 2.69
539 550 2.730069 TGCTTTGCAAGTCATCGTTTG 58.270 42.857 0.00 0.00 34.76 2.93
540 551 3.311106 CATGCTTTGCAAGTCATCGTTT 58.689 40.909 11.18 0.00 43.62 3.60
541 552 2.937591 CATGCTTTGCAAGTCATCGTT 58.062 42.857 11.18 0.00 43.62 3.85
542 553 2.624316 CATGCTTTGCAAGTCATCGT 57.376 45.000 11.18 0.00 43.62 3.73
553 564 7.550196 AGGGAGTAAAATTTAATGCATGCTTTG 59.450 33.333 24.68 0.00 0.00 2.77
554 565 7.623630 AGGGAGTAAAATTTAATGCATGCTTT 58.376 30.769 20.33 20.71 0.00 3.51
555 566 7.124750 AGAGGGAGTAAAATTTAATGCATGCTT 59.875 33.333 20.33 10.16 0.00 3.91
556 567 6.608808 AGAGGGAGTAAAATTTAATGCATGCT 59.391 34.615 20.33 1.26 0.00 3.79
557 568 6.698766 CAGAGGGAGTAAAATTTAATGCATGC 59.301 38.462 11.82 11.82 0.00 4.06
558 569 7.775120 ACAGAGGGAGTAAAATTTAATGCATG 58.225 34.615 0.00 5.11 0.00 4.06
559 570 7.961326 ACAGAGGGAGTAAAATTTAATGCAT 57.039 32.000 6.99 0.00 0.00 3.96
560 571 7.775053 AACAGAGGGAGTAAAATTTAATGCA 57.225 32.000 6.99 0.00 0.00 3.96
561 572 8.523658 AGAAACAGAGGGAGTAAAATTTAATGC 58.476 33.333 0.00 0.00 0.00 3.56
571 582 9.725206 ACCTATATTTAGAAACAGAGGGAGTAA 57.275 33.333 0.00 0.00 0.00 2.24
572 583 9.364653 GACCTATATTTAGAAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
573 584 8.068733 AGACCTATATTTAGAAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
574 585 8.485578 AGACCTATATTTAGAAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
575 586 8.855804 AAGACCTATATTTAGAAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
576 587 9.907229 AAAAGACCTATATTTAGAAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
611 622 9.869757 CATTCATCCGTATGTAGTCCATATTTA 57.130 33.333 0.00 0.00 38.29 1.40
612 623 8.375506 ACATTCATCCGTATGTAGTCCATATTT 58.624 33.333 0.00 0.00 38.29 1.40
613 624 7.907389 ACATTCATCCGTATGTAGTCCATATT 58.093 34.615 0.00 0.00 38.29 1.28
614 625 7.482169 ACATTCATCCGTATGTAGTCCATAT 57.518 36.000 0.00 0.00 38.29 1.78
615 626 6.911250 ACATTCATCCGTATGTAGTCCATA 57.089 37.500 0.00 0.00 31.98 2.74
616 627 5.808366 ACATTCATCCGTATGTAGTCCAT 57.192 39.130 0.00 0.00 31.98 3.41
617 628 6.016527 GTCTACATTCATCCGTATGTAGTCCA 60.017 42.308 17.13 1.82 46.08 4.02
618 629 6.016527 TGTCTACATTCATCCGTATGTAGTCC 60.017 42.308 17.13 11.79 46.08 3.85
619 630 6.967135 TGTCTACATTCATCCGTATGTAGTC 58.033 40.000 17.13 13.73 46.08 2.59
620 631 6.954487 TGTCTACATTCATCCGTATGTAGT 57.046 37.500 17.13 4.44 46.08 2.73
623 634 8.807118 AGAATATGTCTACATTCATCCGTATGT 58.193 33.333 0.12 0.00 37.04 2.29
624 635 9.080915 CAGAATATGTCTACATTCATCCGTATG 57.919 37.037 0.12 0.00 37.76 2.39
625 636 8.253810 CCAGAATATGTCTACATTCATCCGTAT 58.746 37.037 0.12 0.00 37.76 3.06
626 637 7.450323 TCCAGAATATGTCTACATTCATCCGTA 59.550 37.037 0.12 0.00 37.76 4.02
627 638 6.267699 TCCAGAATATGTCTACATTCATCCGT 59.732 38.462 0.12 0.00 37.76 4.69
628 639 6.691508 TCCAGAATATGTCTACATTCATCCG 58.308 40.000 0.12 0.00 37.76 4.18
629 640 7.601886 CACTCCAGAATATGTCTACATTCATCC 59.398 40.741 0.12 0.00 37.76 3.51
630 641 8.147058 ACACTCCAGAATATGTCTACATTCATC 58.853 37.037 0.12 0.00 37.76 2.92
631 642 8.027524 ACACTCCAGAATATGTCTACATTCAT 57.972 34.615 0.12 0.00 37.76 2.57
632 643 7.423844 ACACTCCAGAATATGTCTACATTCA 57.576 36.000 0.12 0.00 37.76 2.57
633 644 8.851145 TCTACACTCCAGAATATGTCTACATTC 58.149 37.037 0.12 0.00 37.76 2.67
634 645 8.768501 TCTACACTCCAGAATATGTCTACATT 57.231 34.615 0.12 0.00 37.76 2.71
635 646 8.948401 ATCTACACTCCAGAATATGTCTACAT 57.052 34.615 0.63 0.63 40.22 2.29
636 647 8.768501 AATCTACACTCCAGAATATGTCTACA 57.231 34.615 0.00 0.00 33.56 2.74
637 648 8.851145 TGAATCTACACTCCAGAATATGTCTAC 58.149 37.037 0.00 0.00 33.56 2.59
638 649 8.851145 GTGAATCTACACTCCAGAATATGTCTA 58.149 37.037 0.00 0.00 37.73 2.59
639 650 7.563188 AGTGAATCTACACTCCAGAATATGTCT 59.437 37.037 0.00 0.00 46.36 3.41
640 651 7.721402 AGTGAATCTACACTCCAGAATATGTC 58.279 38.462 0.00 0.00 46.36 3.06
641 652 7.667575 AGTGAATCTACACTCCAGAATATGT 57.332 36.000 0.00 0.00 46.36 2.29
653 664 6.369065 ACGGAGAAAAATGAGTGAATCTACAC 59.631 38.462 0.00 0.00 40.60 2.90
654 665 6.464222 ACGGAGAAAAATGAGTGAATCTACA 58.536 36.000 0.00 0.00 0.00 2.74
655 666 6.969828 ACGGAGAAAAATGAGTGAATCTAC 57.030 37.500 0.00 0.00 0.00 2.59
656 667 8.258007 ACATACGGAGAAAAATGAGTGAATCTA 58.742 33.333 0.00 0.00 0.00 1.98
657 668 7.106239 ACATACGGAGAAAAATGAGTGAATCT 58.894 34.615 0.00 0.00 0.00 2.40
658 669 7.308782 ACATACGGAGAAAAATGAGTGAATC 57.691 36.000 0.00 0.00 0.00 2.52
659 670 8.258007 TCTACATACGGAGAAAAATGAGTGAAT 58.742 33.333 0.00 0.00 0.00 2.57
660 671 7.544566 GTCTACATACGGAGAAAAATGAGTGAA 59.455 37.037 0.00 0.00 0.00 3.18
661 672 7.033791 GTCTACATACGGAGAAAAATGAGTGA 58.966 38.462 0.00 0.00 0.00 3.41
662 673 6.255887 GGTCTACATACGGAGAAAAATGAGTG 59.744 42.308 0.00 0.00 0.00 3.51
663 674 6.070995 TGGTCTACATACGGAGAAAAATGAGT 60.071 38.462 0.00 0.00 0.00 3.41
664 675 6.338146 TGGTCTACATACGGAGAAAAATGAG 58.662 40.000 0.00 0.00 0.00 2.90
665 676 6.288941 TGGTCTACATACGGAGAAAAATGA 57.711 37.500 0.00 0.00 0.00 2.57
666 677 8.833231 ATATGGTCTACATACGGAGAAAAATG 57.167 34.615 0.00 0.00 44.41 2.32
668 679 9.976511 CTAATATGGTCTACATACGGAGAAAAA 57.023 33.333 0.00 0.00 44.41 1.94
669 680 9.358406 TCTAATATGGTCTACATACGGAGAAAA 57.642 33.333 0.00 0.00 44.41 2.29
670 681 8.929260 TCTAATATGGTCTACATACGGAGAAA 57.071 34.615 0.00 0.00 44.41 2.52
671 682 8.929260 TTCTAATATGGTCTACATACGGAGAA 57.071 34.615 0.00 0.00 44.41 2.87
672 683 9.175312 GATTCTAATATGGTCTACATACGGAGA 57.825 37.037 0.00 0.00 44.41 3.71
673 684 8.407064 GGATTCTAATATGGTCTACATACGGAG 58.593 40.741 0.00 0.00 44.41 4.63
674 685 8.114102 AGGATTCTAATATGGTCTACATACGGA 58.886 37.037 0.00 0.00 44.41 4.69
675 686 8.294954 AGGATTCTAATATGGTCTACATACGG 57.705 38.462 0.00 0.00 44.41 4.02
704 715 7.937394 CCCCTCCGTTTCTAAATATATGTCTTT 59.063 37.037 0.00 0.00 0.00 2.52
706 717 6.013639 CCCCCTCCGTTTCTAAATATATGTCT 60.014 42.308 0.00 0.00 0.00 3.41
707 718 6.171213 CCCCCTCCGTTTCTAAATATATGTC 58.829 44.000 0.00 0.00 0.00 3.06
709 720 6.123045 ACCCCCTCCGTTTCTAAATATATG 57.877 41.667 0.00 0.00 0.00 1.78
711 722 6.142498 TGTACCCCCTCCGTTTCTAAATATA 58.858 40.000 0.00 0.00 0.00 0.86
712 723 4.970640 TGTACCCCCTCCGTTTCTAAATAT 59.029 41.667 0.00 0.00 0.00 1.28
716 727 2.323999 TGTACCCCCTCCGTTTCTAA 57.676 50.000 0.00 0.00 0.00 2.10
720 731 0.330267 CCAATGTACCCCCTCCGTTT 59.670 55.000 0.00 0.00 0.00 3.60
722 733 0.043032 TACCAATGTACCCCCTCCGT 59.957 55.000 0.00 0.00 0.00 4.69
723 734 0.466963 GTACCAATGTACCCCCTCCG 59.533 60.000 0.00 0.00 41.27 4.63
724 735 1.587066 TGTACCAATGTACCCCCTCC 58.413 55.000 0.81 0.00 45.59 4.30
725 736 2.508300 ACATGTACCAATGTACCCCCTC 59.492 50.000 0.00 0.00 45.59 4.30
727 738 4.457466 CTTACATGTACCAATGTACCCCC 58.543 47.826 4.68 0.00 45.59 5.40
728 739 3.881089 GCTTACATGTACCAATGTACCCC 59.119 47.826 4.68 0.00 45.59 4.95
729 740 4.574828 CAGCTTACATGTACCAATGTACCC 59.425 45.833 4.68 1.75 45.59 3.69
730 741 5.424757 TCAGCTTACATGTACCAATGTACC 58.575 41.667 4.68 2.02 45.59 3.34
731 742 6.106673 ACTCAGCTTACATGTACCAATGTAC 58.893 40.000 4.68 0.00 46.22 2.90
733 744 5.165961 ACTCAGCTTACATGTACCAATGT 57.834 39.130 4.68 4.44 43.21 2.71
734 745 6.072508 ACAAACTCAGCTTACATGTACCAATG 60.073 38.462 4.68 2.90 0.00 2.82
735 746 6.003950 ACAAACTCAGCTTACATGTACCAAT 58.996 36.000 4.68 0.00 0.00 3.16
736 747 5.238432 CACAAACTCAGCTTACATGTACCAA 59.762 40.000 4.68 0.00 0.00 3.67
741 752 3.815401 GGTCACAAACTCAGCTTACATGT 59.185 43.478 2.69 2.69 0.00 3.21
745 756 3.877508 ACAAGGTCACAAACTCAGCTTAC 59.122 43.478 0.00 0.00 0.00 2.34
747 758 3.004752 ACAAGGTCACAAACTCAGCTT 57.995 42.857 0.00 0.00 0.00 3.74
752 763 9.537848 CGTTTTTATATACAAGGTCACAAACTC 57.462 33.333 0.00 0.00 0.00 3.01
754 765 8.505625 TCCGTTTTTATATACAAGGTCACAAAC 58.494 33.333 0.00 0.00 0.00 2.93
756 767 7.334921 CCTCCGTTTTTATATACAAGGTCACAA 59.665 37.037 0.00 0.00 0.00 3.33
757 768 6.819649 CCTCCGTTTTTATATACAAGGTCACA 59.180 38.462 0.00 0.00 0.00 3.58
758 769 6.259387 CCCTCCGTTTTTATATACAAGGTCAC 59.741 42.308 0.00 0.00 0.00 3.67
760 771 6.585416 TCCCTCCGTTTTTATATACAAGGTC 58.415 40.000 0.00 0.00 0.00 3.85
761 772 6.157471 ACTCCCTCCGTTTTTATATACAAGGT 59.843 38.462 0.00 0.00 0.00 3.50
762 773 6.589135 ACTCCCTCCGTTTTTATATACAAGG 58.411 40.000 0.00 0.00 0.00 3.61
763 774 9.774413 ATTACTCCCTCCGTTTTTATATACAAG 57.226 33.333 0.00 0.00 0.00 3.16
771 782 8.866970 AATGTTTATTACTCCCTCCGTTTTTA 57.133 30.769 0.00 0.00 0.00 1.52
800 877 1.377690 TAGCCACATCCCCTCCAAAA 58.622 50.000 0.00 0.00 0.00 2.44
811 888 5.239087 CCAAACAAATGCTTTTTAGCCACAT 59.761 36.000 0.00 0.00 0.00 3.21
822 899 3.642848 ACATGACCTCCAAACAAATGCTT 59.357 39.130 0.00 0.00 0.00 3.91
839 916 1.074405 AGCAGCTTCTTCCCAACATGA 59.926 47.619 0.00 0.00 0.00 3.07
851 928 3.760673 CTCGTGTCGAGCAGCTTC 58.239 61.111 0.00 0.00 46.75 3.86
1090 1175 3.140814 GGGCGACTGGAATTGGCC 61.141 66.667 0.00 0.00 41.22 5.36
1983 2068 1.079750 GCCGTCGAAGAGCCTCTTT 60.080 57.895 8.66 0.00 36.73 2.52
2176 2270 3.350163 AAGGCATGTGGGAGGGGG 61.350 66.667 0.00 0.00 0.00 5.40
2185 2279 1.874345 GCAGAGCAAGCAAGGCATGT 61.874 55.000 0.00 0.00 29.47 3.21
2193 2287 1.378119 CCATGGAGCAGAGCAAGCA 60.378 57.895 5.56 0.00 0.00 3.91
2270 2376 8.322828 TGGCAGAAATACAAACTGGTATTACTA 58.677 33.333 0.00 0.00 41.76 1.82
2271 2377 7.172342 TGGCAGAAATACAAACTGGTATTACT 58.828 34.615 0.00 0.00 41.76 2.24
2272 2378 7.385778 TGGCAGAAATACAAACTGGTATTAC 57.614 36.000 0.00 0.00 41.76 1.89
2273 2379 7.885922 TCTTGGCAGAAATACAAACTGGTATTA 59.114 33.333 0.00 0.00 41.76 0.98
2274 2380 6.719370 TCTTGGCAGAAATACAAACTGGTATT 59.281 34.615 0.00 0.00 43.82 1.89
2275 2381 6.245408 TCTTGGCAGAAATACAAACTGGTAT 58.755 36.000 0.00 0.00 35.53 2.73
2390 2499 3.212685 GCTCCTGATCTTTCCTTGATGG 58.787 50.000 0.00 0.00 37.10 3.51
2458 2567 9.472361 CACTGATTTTGATCTGAAACTGAAATT 57.528 29.630 0.00 0.00 0.00 1.82
2467 2577 4.038271 AGCCCACTGATTTTGATCTGAA 57.962 40.909 0.00 0.00 0.00 3.02
2469 2579 4.461781 AGAAAGCCCACTGATTTTGATCTG 59.538 41.667 0.00 0.00 0.00 2.90
2535 2645 2.483714 GCAACAACAGAGGAGTCACTCA 60.484 50.000 7.24 0.00 39.97 3.41
2536 2646 2.139118 GCAACAACAGAGGAGTCACTC 58.861 52.381 0.00 0.00 37.77 3.51
2543 2653 0.319900 GCTCTCGCAACAACAGAGGA 60.320 55.000 0.00 0.00 35.19 3.71
2619 2729 0.955905 CCAACCAAGTTACCAACCGG 59.044 55.000 0.00 0.00 38.77 5.28
2630 2740 3.636764 AGGAAAGCAACTTACCAACCAAG 59.363 43.478 0.00 0.00 0.00 3.61
2709 2819 4.016444 ACCGCTTCCATGATTGTGTAATT 58.984 39.130 0.00 0.00 0.00 1.40
2711 2821 3.066291 ACCGCTTCCATGATTGTGTAA 57.934 42.857 0.00 0.00 0.00 2.41
2713 2823 2.747446 GTTACCGCTTCCATGATTGTGT 59.253 45.455 0.00 0.00 0.00 3.72
2714 2824 2.097466 GGTTACCGCTTCCATGATTGTG 59.903 50.000 0.00 0.00 0.00 3.33
2715 2825 2.290641 TGGTTACCGCTTCCATGATTGT 60.291 45.455 0.00 0.00 0.00 2.71
2716 2826 2.097466 GTGGTTACCGCTTCCATGATTG 59.903 50.000 7.82 0.00 33.68 2.67
2717 2827 2.026262 AGTGGTTACCGCTTCCATGATT 60.026 45.455 12.22 0.00 42.24 2.57
2809 2919 2.012673 GGATGACTTGCTGACCATGTC 58.987 52.381 0.00 0.00 44.56 3.06
2810 2920 1.352017 TGGATGACTTGCTGACCATGT 59.648 47.619 0.00 0.00 34.81 3.21
2811 2921 2.118313 TGGATGACTTGCTGACCATG 57.882 50.000 0.00 0.00 0.00 3.66
2812 2922 2.440409 GTTGGATGACTTGCTGACCAT 58.560 47.619 0.00 0.00 0.00 3.55
2835 2945 6.409524 AAAATCATGTGTTGTCTCCAATGT 57.590 33.333 0.00 0.00 32.11 2.71
2843 2953 9.138062 TGTTATATGCAAAAATCATGTGTTGTC 57.862 29.630 0.00 0.00 0.00 3.18
2881 2991 6.869421 AAAACGTCTGAATTTTTCACACAG 57.131 33.333 0.00 0.00 35.46 3.66
2909 3033 3.198417 GGATTCCCCAGCACAAATTGATT 59.802 43.478 0.00 0.00 34.14 2.57
2960 3084 7.807977 TTCTAAGGCATGGTTTATGAGAATC 57.192 36.000 0.00 0.00 39.21 2.52
2961 3085 8.773033 AATTCTAAGGCATGGTTTATGAGAAT 57.227 30.769 0.00 0.00 37.82 2.40
3019 3148 2.646930 TGATTGCAGCCATAGGTTCTG 58.353 47.619 0.00 0.00 0.00 3.02
3090 3219 7.658179 TGCAAAGTCGATCCATAAGAATATC 57.342 36.000 0.00 0.00 0.00 1.63
3130 3259 2.365617 TCCTATCCGAATGAGTGGAAGC 59.634 50.000 0.00 0.00 37.90 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.