Multiple sequence alignment - TraesCS7A01G408900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G408900 chr7A 100.000 6721 0 0 1 6721 595069176 595075896 0.000000e+00 12412
1 TraesCS7A01G408900 chr7A 88.462 520 60 0 1 520 595199357 595198838 4.420000e-176 628
2 TraesCS7A01G408900 chr7A 92.949 156 9 2 4202 4356 507703782 507703936 6.780000e-55 226
3 TraesCS7A01G408900 chr7A 79.290 338 56 8 2275 2605 595070705 595071035 2.440000e-54 224
4 TraesCS7A01G408900 chr7A 79.351 339 54 10 1530 1860 595071450 595071780 2.440000e-54 224
5 TraesCS7A01G408900 chr7A 96.350 137 4 1 4202 4337 735447424 735447288 2.440000e-54 224
6 TraesCS7A01G408900 chr7A 93.243 148 9 1 4202 4349 724678725 724678579 4.080000e-52 217
7 TraesCS7A01G408900 chr7A 84.158 202 31 1 2638 2839 595071035 595071235 1.910000e-45 195
8 TraesCS7A01G408900 chr7A 84.158 202 31 1 1860 2060 595071813 595072014 1.910000e-45 195
9 TraesCS7A01G408900 chr7A 87.234 141 18 0 5549 5689 595074589 595074729 1.940000e-35 161
10 TraesCS7A01G408900 chr7A 87.234 141 18 0 5414 5554 595074724 595074864 1.940000e-35 161
11 TraesCS7A01G408900 chr7D 93.974 3286 137 27 1 3253 519261302 519264559 0.000000e+00 4915
12 TraesCS7A01G408900 chr7D 97.055 2920 58 8 3344 6236 519264617 519267535 0.000000e+00 4891
13 TraesCS7A01G408900 chr7D 88.077 520 62 0 1 520 519271749 519271230 9.580000e-173 617
14 TraesCS7A01G408900 chr7D 77.864 515 64 25 1370 1860 519263434 519263922 2.390000e-69 274
15 TraesCS7A01G408900 chr7D 76.275 510 93 15 2119 2605 519262673 519263177 5.210000e-61 246
16 TraesCS7A01G408900 chr7D 93.077 130 8 1 3228 3357 57073203 57073331 8.900000e-44 189
17 TraesCS7A01G408900 chr7D 87.234 141 18 0 5549 5689 519266700 519266840 1.940000e-35 161
18 TraesCS7A01G408900 chr7D 87.324 142 16 2 5414 5554 519266835 519266975 1.940000e-35 161
19 TraesCS7A01G408900 chr7B 91.750 2303 131 33 969 3241 552561709 552563982 0.000000e+00 3145
20 TraesCS7A01G408900 chr7B 96.154 1924 55 5 4330 6238 552564814 552566733 0.000000e+00 3125
21 TraesCS7A01G408900 chr7B 98.115 849 13 1 3356 4201 552563981 552564829 0.000000e+00 1476
22 TraesCS7A01G408900 chr7B 93.548 961 41 9 1 953 552560344 552561291 0.000000e+00 1411
23 TraesCS7A01G408900 chr7B 87.500 520 65 0 1 520 552666167 552665648 9.640000e-168 601
24 TraesCS7A01G408900 chr7B 81.416 339 47 11 1530 1860 552563025 552563355 5.170000e-66 263
25 TraesCS7A01G408900 chr7B 80.119 337 60 7 2267 2599 552562262 552562595 1.870000e-60 244
26 TraesCS7A01G408900 chr7B 91.870 123 10 0 6599 6721 669865429 669865307 8.960000e-39 172
27 TraesCS7A01G408900 chr7B 88.028 142 15 2 5414 5554 552566034 552566174 4.170000e-37 167
28 TraesCS7A01G408900 chr5A 95.484 310 13 1 6253 6561 366030498 366030807 1.680000e-135 494
29 TraesCS7A01G408900 chr5A 95.146 309 15 0 6251 6559 630124088 630123780 7.830000e-134 488
30 TraesCS7A01G408900 chr5A 97.479 119 3 0 3239 3357 446022574 446022456 3.180000e-48 204
31 TraesCS7A01G408900 chr3A 94.340 318 18 0 6251 6568 291788646 291788329 7.830000e-134 488
32 TraesCS7A01G408900 chr3A 94.872 312 14 2 6250 6559 675874733 675875044 2.820000e-133 486
33 TraesCS7A01G408900 chr3A 94.822 309 16 0 6251 6559 363316286 363315978 3.640000e-132 483
34 TraesCS7A01G408900 chr3A 92.000 125 10 0 6597 6721 119439085 119438961 6.930000e-40 176
35 TraesCS7A01G408900 chr6A 94.081 321 18 1 6241 6561 573193107 573192788 2.820000e-133 486
36 TraesCS7A01G408900 chr6A 91.870 123 10 0 6599 6721 65515032 65514910 8.960000e-39 172
37 TraesCS7A01G408900 chr1D 94.839 310 16 0 6250 6559 290446042 290446351 1.010000e-132 484
38 TraesCS7A01G408900 chr1D 90.780 141 10 3 3236 3374 116548462 116548323 1.150000e-42 185
39 TraesCS7A01G408900 chr4D 94.822 309 16 0 6253 6561 43651401 43651709 3.640000e-132 483
40 TraesCS7A01G408900 chr4D 95.798 119 5 0 3239 3357 503357914 503358032 6.880000e-45 193
41 TraesCS7A01G408900 chr5B 92.966 327 18 5 6241 6564 669680665 669680341 7.890000e-129 472
42 TraesCS7A01G408900 chr5B 91.870 123 10 0 6599 6721 522364177 522364055 8.960000e-39 172
43 TraesCS7A01G408900 chr2B 97.101 138 3 1 4199 4335 259014108 259013971 1.460000e-56 231
44 TraesCS7A01G408900 chr2B 95.161 124 5 1 3239 3361 659534499 659534376 1.910000e-45 195
45 TraesCS7A01G408900 chr1B 95.105 143 7 0 4202 4344 324124556 324124414 6.780000e-55 226
46 TraesCS7A01G408900 chr3D 96.350 137 4 1 4198 4333 539908355 539908219 2.440000e-54 224
47 TraesCS7A01G408900 chr3D 94.355 124 7 0 3234 3357 107671086 107670963 2.470000e-44 191
48 TraesCS7A01G408900 chr4B 95.652 138 6 0 4202 4339 187177146 187177283 8.770000e-54 222
49 TraesCS7A01G408900 chr4B 92.683 123 9 0 6599 6721 511334816 511334938 1.930000e-40 178
50 TraesCS7A01G408900 chr2A 93.243 148 7 3 4202 4348 53282933 53283078 1.470000e-51 215
51 TraesCS7A01G408900 chr2A 93.750 128 8 0 3239 3366 729162002 729162129 6.880000e-45 193
52 TraesCS7A01G408900 chr2A 91.852 135 10 1 3231 3364 634616316 634616450 3.200000e-43 187
53 TraesCS7A01G408900 chr2A 92.126 127 10 0 6595 6721 141541958 141542084 5.360000e-41 180
54 TraesCS7A01G408900 chr5D 95.082 122 6 0 3236 3357 345101927 345102048 6.880000e-45 193
55 TraesCS7A01G408900 chr1A 93.701 127 6 1 3233 3359 301777834 301777958 8.900000e-44 189
56 TraesCS7A01G408900 chr1A 93.600 125 7 1 3233 3357 459516782 459516905 1.150000e-42 185
57 TraesCS7A01G408900 chr3B 93.496 123 8 0 6599 6721 348523289 348523167 4.140000e-42 183
58 TraesCS7A01G408900 chr3B 91.603 131 11 0 3239 3369 829966243 829966113 1.490000e-41 182
59 TraesCS7A01G408900 chr3B 92.063 126 10 0 6596 6721 752912827 752912952 1.930000e-40 178
60 TraesCS7A01G408900 chr6D 92.683 123 9 0 6599 6721 412624439 412624561 1.930000e-40 178


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G408900 chr7A 595069176 595075896 6720 False 12412.000000 12412 100.000000 1 6721 1 chr7A.!!$F2 6720
1 TraesCS7A01G408900 chr7A 595198838 595199357 519 True 628.000000 628 88.462000 1 520 1 chr7A.!!$R1 519
2 TraesCS7A01G408900 chr7D 519261302 519267535 6233 False 1774.666667 4915 86.621000 1 6236 6 chr7D.!!$F2 6235
3 TraesCS7A01G408900 chr7D 519271230 519271749 519 True 617.000000 617 88.077000 1 520 1 chr7D.!!$R1 519
4 TraesCS7A01G408900 chr7B 552560344 552566733 6389 False 1404.428571 3145 89.875714 1 6238 7 chr7B.!!$F1 6237
5 TraesCS7A01G408900 chr7B 552665648 552666167 519 True 601.000000 601 87.500000 1 520 1 chr7B.!!$R1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
929 937 2.033602 CCCAGGAAACCCACCGTC 59.966 66.667 0.00 0.00 0.0 4.79 F
2575 3025 0.397941 CACTCAGCCAAGAACTCCCA 59.602 55.000 0.00 0.00 0.0 4.37 F
3266 3794 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.0 4.02 F
4305 4836 0.693049 AGCCTACCCCAACTTGTCTG 59.307 55.000 0.00 0.00 0.0 3.51 F
4400 4940 3.934068 TGTGCTAGCCTAGGTTTGTTAC 58.066 45.455 13.29 9.58 0.0 2.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2884 3335 0.179134 GGCAGCTACCAGAGTACGTG 60.179 60.000 0.00 0.00 0.00 4.49 R
4440 4980 3.074504 TCGAAGGACGTATATGTGCAC 57.925 47.619 17.64 10.75 43.13 4.57 R
4932 5473 0.321671 TTGCTCTTCTCAGGTTCCGG 59.678 55.000 0.00 0.00 0.00 5.14 R
5393 5934 0.400213 TGCTCACGGGAAAATCTGGT 59.600 50.000 0.00 0.00 0.00 4.00 R
6253 6808 0.969149 CCTCCAAACCAAAGAAGGCC 59.031 55.000 0.00 0.00 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
537 538 2.648102 GGATGCTCGTCGTCGTCG 60.648 66.667 5.50 5.50 38.33 5.12
552 553 3.752167 TCGTCCTCCTCCCCCTCC 61.752 72.222 0.00 0.00 0.00 4.30
833 836 8.899771 GGTACACACTATTGCTATTTATTTGGT 58.100 33.333 0.00 0.00 0.00 3.67
929 937 2.033602 CCCAGGAAACCCACCGTC 59.966 66.667 0.00 0.00 0.00 4.79
979 1390 3.296709 GAGTTGCGAGGGGAAGCGA 62.297 63.158 0.00 0.00 35.87 4.93
1257 1668 4.388499 TTCTTCCGCCAGACCGCC 62.388 66.667 0.00 0.00 0.00 6.13
1336 1749 4.095036 GCCGTCCTCCTCTTTTATCTTTTG 59.905 45.833 0.00 0.00 0.00 2.44
1346 1759 9.892130 TCCTCTTTTATCTTTTGGATAGACTTC 57.108 33.333 0.00 0.00 38.07 3.01
1463 1876 5.335661 GCTTCAGGATTTCACGTGGTTAATT 60.336 40.000 17.00 0.00 0.00 1.40
1464 1877 5.621197 TCAGGATTTCACGTGGTTAATTG 57.379 39.130 17.00 8.48 0.00 2.32
1465 1878 4.083003 TCAGGATTTCACGTGGTTAATTGC 60.083 41.667 17.00 4.88 0.00 3.56
1466 1879 3.823873 AGGATTTCACGTGGTTAATTGCA 59.176 39.130 17.00 0.00 0.00 4.08
1467 1880 4.462483 AGGATTTCACGTGGTTAATTGCAT 59.538 37.500 17.00 0.00 0.00 3.96
1468 1881 5.047377 AGGATTTCACGTGGTTAATTGCATT 60.047 36.000 17.00 0.00 0.00 3.56
1469 1882 5.637387 GGATTTCACGTGGTTAATTGCATTT 59.363 36.000 17.00 0.00 0.00 2.32
1471 1884 7.329717 GGATTTCACGTGGTTAATTGCATTTTA 59.670 33.333 17.00 0.00 0.00 1.52
1472 1885 8.770438 ATTTCACGTGGTTAATTGCATTTTAT 57.230 26.923 17.00 0.00 0.00 1.40
1473 1886 7.804614 TTCACGTGGTTAATTGCATTTTATC 57.195 32.000 17.00 0.00 0.00 1.75
1475 1888 5.229052 CACGTGGTTAATTGCATTTTATCGG 59.771 40.000 7.95 0.00 0.00 4.18
1476 1889 5.124138 ACGTGGTTAATTGCATTTTATCGGA 59.876 36.000 0.00 0.00 0.00 4.55
1477 1890 6.183360 ACGTGGTTAATTGCATTTTATCGGAT 60.183 34.615 0.00 0.00 0.00 4.18
1504 1932 5.675538 AGCATAAACTAGAGCTTTACTGGG 58.324 41.667 0.00 0.00 32.52 4.45
1505 1933 5.189934 AGCATAAACTAGAGCTTTACTGGGT 59.810 40.000 0.00 0.00 32.52 4.51
1593 2026 3.026694 GCATCATCCCCTACAAGCTTTT 58.973 45.455 0.00 0.00 0.00 2.27
1668 2101 5.734855 TGAAGTTTCAGTGTTACTCAAGC 57.265 39.130 0.00 0.00 32.50 4.01
1677 2110 4.696877 CAGTGTTACTCAAGCAATGATGGA 59.303 41.667 0.00 0.00 37.44 3.41
1737 2170 4.133820 TCGTCACAATGATGAACCTTTGT 58.866 39.130 0.00 0.00 39.27 2.83
1763 2201 1.064389 GCCAGCCCCTTAACTTCATCT 60.064 52.381 0.00 0.00 0.00 2.90
1820 2260 3.866816 TGATAGCCATGATTCTCCTCCT 58.133 45.455 0.00 0.00 0.00 3.69
1848 2288 3.949113 TCCCCGATTTTATGGCTAAACAC 59.051 43.478 0.00 0.00 0.00 3.32
1879 2319 4.930963 TGTTCAAAACAGCGTGAATCATT 58.069 34.783 0.00 0.00 36.23 2.57
1900 2341 6.716173 TCATTGACTTTTCTTGTCATCCATGA 59.284 34.615 0.00 0.00 42.95 3.07
2048 2496 9.668497 ACTATAGGTTAAACAAGAAATGAGGAC 57.332 33.333 4.43 0.00 0.00 3.85
2063 2511 3.649073 TGAGGACATACACTTGTTCGTG 58.351 45.455 0.00 0.00 40.67 4.35
2082 2531 3.124466 CGTGACAATTCTCGCCACAATTA 59.876 43.478 0.00 0.00 32.45 1.40
2089 2538 6.716628 ACAATTCTCGCCACAATTATATCCAT 59.283 34.615 0.00 0.00 0.00 3.41
2092 2541 3.749226 TCGCCACAATTATATCCATGCA 58.251 40.909 0.00 0.00 0.00 3.96
2111 2560 1.426041 AACGTGCGTCAACTGGTCAC 61.426 55.000 0.00 0.00 0.00 3.67
2115 2564 2.022129 GCGTCAACTGGTCACGGAG 61.022 63.158 0.00 0.00 34.04 4.63
2181 2630 7.769272 ACAGTTACATTGTTTTGGTCATTTG 57.231 32.000 0.00 0.00 0.00 2.32
2182 2631 6.257630 ACAGTTACATTGTTTTGGTCATTTGC 59.742 34.615 0.00 0.00 0.00 3.68
2211 2660 3.005791 GCTTTCCTGTGGTTAATTGTGCT 59.994 43.478 0.00 0.00 0.00 4.40
2231 2680 4.155826 TGCTGTGATGCTGGTATTTGTTAC 59.844 41.667 0.00 0.00 0.00 2.50
2368 2817 5.525378 TGGCGTTGCTTTATTTTTGTCATTT 59.475 32.000 0.00 0.00 0.00 2.32
2402 2851 3.743521 TGAATGACTGAAGTTGGAGTGG 58.256 45.455 0.00 0.00 0.00 4.00
2414 2863 3.714798 AGTTGGAGTGGTACTGAAGGAAA 59.285 43.478 0.00 0.00 0.00 3.13
2420 2869 4.232091 AGTGGTACTGAAGGAAAGAGGAA 58.768 43.478 0.00 0.00 0.00 3.36
2487 2936 5.161943 AGACGAACCTTTGTAATTAGCCT 57.838 39.130 0.00 0.00 0.00 4.58
2565 3015 2.038820 TGATTGTCATGACACTCAGCCA 59.961 45.455 33.10 18.65 43.19 4.75
2575 3025 0.397941 CACTCAGCCAAGAACTCCCA 59.602 55.000 0.00 0.00 0.00 4.37
2600 3050 9.509855 CAAATTTTACGGCTAAACATATTAGCA 57.490 29.630 18.66 1.50 46.78 3.49
2644 3094 5.789643 AATTCCAGCTAGCTTTTCACAAA 57.210 34.783 16.46 2.28 0.00 2.83
2645 3095 4.836125 TTCCAGCTAGCTTTTCACAAAG 57.164 40.909 16.46 0.00 42.26 2.77
2700 3150 2.305009 GCCAATATCAGCTGCTTCCTT 58.695 47.619 9.47 0.00 0.00 3.36
2751 3201 4.687215 GCGACTGTGCAGCCCTGA 62.687 66.667 0.00 0.00 34.15 3.86
2768 3218 3.594134 CCTGATCTTGTCCTGTCTGAAC 58.406 50.000 0.00 0.00 0.00 3.18
2846 3296 3.972502 GGAAATACACTTGTTTGTCACGC 59.027 43.478 0.00 0.00 0.00 5.34
2866 3317 3.375610 CGCTCTCTGCACTTAGACTAAGA 59.624 47.826 25.65 5.11 43.06 2.10
2884 3335 6.166982 ACTAAGAACACTCAATCTAACCAGC 58.833 40.000 0.00 0.00 0.00 4.85
2885 3336 4.623932 AGAACACTCAATCTAACCAGCA 57.376 40.909 0.00 0.00 0.00 4.41
2886 3337 4.319177 AGAACACTCAATCTAACCAGCAC 58.681 43.478 0.00 0.00 0.00 4.40
2887 3338 2.688507 ACACTCAATCTAACCAGCACG 58.311 47.619 0.00 0.00 0.00 5.34
2892 3343 4.106029 TCAATCTAACCAGCACGTACTC 57.894 45.455 0.00 0.00 0.00 2.59
2928 3379 2.092429 TCTGGTTGCTTCCAAGAGTTGT 60.092 45.455 2.49 0.00 37.01 3.32
3248 3776 9.429109 TTTCCCAAGTTAAAATATATTCCCTCC 57.571 33.333 0.00 0.00 0.00 4.30
3249 3777 7.228590 TCCCAAGTTAAAATATATTCCCTCCG 58.771 38.462 0.00 0.00 0.00 4.63
3250 3778 7.002276 CCCAAGTTAAAATATATTCCCTCCGT 58.998 38.462 0.00 0.00 0.00 4.69
3251 3779 7.174426 CCCAAGTTAAAATATATTCCCTCCGTC 59.826 40.741 0.00 0.00 0.00 4.79
3252 3780 7.174426 CCAAGTTAAAATATATTCCCTCCGTCC 59.826 40.741 0.00 0.00 0.00 4.79
3253 3781 6.461640 AGTTAAAATATATTCCCTCCGTCCG 58.538 40.000 0.00 0.00 0.00 4.79
3254 3782 6.268387 AGTTAAAATATATTCCCTCCGTCCGA 59.732 38.462 0.00 0.00 0.00 4.55
3255 3783 5.556006 AAAATATATTCCCTCCGTCCGAA 57.444 39.130 0.00 0.00 0.00 4.30
3256 3784 5.556006 AAATATATTCCCTCCGTCCGAAA 57.444 39.130 0.00 0.00 0.00 3.46
3257 3785 5.556006 AATATATTCCCTCCGTCCGAAAA 57.444 39.130 0.00 0.00 0.00 2.29
3258 3786 3.918294 ATATTCCCTCCGTCCGAAAAA 57.082 42.857 0.00 0.00 0.00 1.94
3259 3787 2.109425 ATTCCCTCCGTCCGAAAAAG 57.891 50.000 0.00 0.00 0.00 2.27
3260 3788 0.604511 TTCCCTCCGTCCGAAAAAGC 60.605 55.000 0.00 0.00 0.00 3.51
3261 3789 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
3262 3790 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
3263 3791 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
3264 3792 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
3265 3793 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
3266 3794 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
3267 3795 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
3268 3796 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
3269 3797 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
3270 3798 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
3271 3799 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
3272 3800 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
3273 3801 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
3274 3802 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
3275 3803 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
3276 3804 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
3277 3805 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
3278 3806 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
3279 3807 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
3280 3808 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
3281 3809 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
3282 3810 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
3283 3811 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
3284 3812 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
3285 3813 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
3286 3814 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
3287 3815 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
3288 3816 5.549228 TCCCTCAAATGGATGTATCTAGCAT 59.451 40.000 0.00 0.00 0.00 3.79
3289 3817 5.879223 CCCTCAAATGGATGTATCTAGCATC 59.121 44.000 1.37 1.37 41.30 3.91
3290 3818 6.470278 CCTCAAATGGATGTATCTAGCATCA 58.530 40.000 9.99 0.00 43.17 3.07
3291 3819 6.938596 CCTCAAATGGATGTATCTAGCATCAA 59.061 38.462 9.99 0.98 43.17 2.57
3292 3820 7.119407 CCTCAAATGGATGTATCTAGCATCAAG 59.881 40.741 9.99 0.59 43.17 3.02
3293 3821 7.512130 TCAAATGGATGTATCTAGCATCAAGT 58.488 34.615 9.99 0.00 43.17 3.16
3294 3822 7.994911 TCAAATGGATGTATCTAGCATCAAGTT 59.005 33.333 9.99 3.16 43.17 2.66
3295 3823 9.276590 CAAATGGATGTATCTAGCATCAAGTTA 57.723 33.333 9.99 0.00 43.17 2.24
3296 3824 9.499479 AAATGGATGTATCTAGCATCAAGTTAG 57.501 33.333 9.99 0.00 43.17 2.34
3297 3825 7.603180 TGGATGTATCTAGCATCAAGTTAGT 57.397 36.000 9.99 0.00 43.17 2.24
3298 3826 7.436933 TGGATGTATCTAGCATCAAGTTAGTG 58.563 38.462 9.99 0.00 43.17 2.74
3299 3827 6.367422 GGATGTATCTAGCATCAAGTTAGTGC 59.633 42.308 9.99 4.02 43.17 4.40
3301 3829 7.582667 TGTATCTAGCATCAAGTTAGTGCTA 57.417 36.000 16.22 16.22 46.54 3.49
3307 3835 6.471233 AGCATCAAGTTAGTGCTAGATACA 57.529 37.500 11.30 0.00 46.54 2.29
3308 3836 7.060383 AGCATCAAGTTAGTGCTAGATACAT 57.940 36.000 11.30 0.00 46.54 2.29
3309 3837 7.504403 AGCATCAAGTTAGTGCTAGATACATT 58.496 34.615 11.30 0.00 46.54 2.71
3310 3838 7.655328 AGCATCAAGTTAGTGCTAGATACATTC 59.345 37.037 11.30 0.00 46.54 2.67
3311 3839 7.439356 GCATCAAGTTAGTGCTAGATACATTCA 59.561 37.037 0.00 0.00 36.02 2.57
3312 3840 9.486497 CATCAAGTTAGTGCTAGATACATTCAT 57.514 33.333 0.00 0.00 0.00 2.57
3314 3842 9.890629 TCAAGTTAGTGCTAGATACATTCATTT 57.109 29.630 0.00 0.00 0.00 2.32
3315 3843 9.926751 CAAGTTAGTGCTAGATACATTCATTTG 57.073 33.333 0.00 0.00 0.00 2.32
3316 3844 9.890629 AAGTTAGTGCTAGATACATTCATTTGA 57.109 29.630 0.00 0.00 0.00 2.69
3317 3845 9.539825 AGTTAGTGCTAGATACATTCATTTGAG 57.460 33.333 0.00 0.00 0.00 3.02
3318 3846 8.768955 GTTAGTGCTAGATACATTCATTTGAGG 58.231 37.037 0.00 0.00 0.00 3.86
3319 3847 7.129457 AGTGCTAGATACATTCATTTGAGGA 57.871 36.000 0.00 0.00 0.00 3.71
3320 3848 7.568349 AGTGCTAGATACATTCATTTGAGGAA 58.432 34.615 0.00 0.00 0.00 3.36
3321 3849 7.497249 AGTGCTAGATACATTCATTTGAGGAAC 59.503 37.037 0.00 0.00 0.00 3.62
3322 3850 7.280876 GTGCTAGATACATTCATTTGAGGAACA 59.719 37.037 0.00 0.00 0.00 3.18
3323 3851 7.828717 TGCTAGATACATTCATTTGAGGAACAA 59.171 33.333 0.00 0.00 36.65 2.83
3324 3852 8.125448 GCTAGATACATTCATTTGAGGAACAAC 58.875 37.037 0.00 0.00 38.29 3.32
3325 3853 7.396540 AGATACATTCATTTGAGGAACAACC 57.603 36.000 0.00 0.00 38.29 3.77
3355 3883 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
3356 3884 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
3367 3895 6.462067 CGGACGGAGGGAGTAGTATTTAAAAT 60.462 42.308 0.00 0.00 0.00 1.82
3437 3965 8.194104 ACTTACTTATGTTACTGCTCTGATCTG 58.806 37.037 0.00 0.00 0.00 2.90
3444 3972 2.826488 ACTGCTCTGATCTGGTAGGTT 58.174 47.619 0.00 0.00 0.00 3.50
3663 4194 3.680642 ACGCTGAATTCATTCCATTCG 57.319 42.857 8.96 6.77 35.97 3.34
3784 4315 2.112190 GCTCTCCTAAGGTTACTGCCT 58.888 52.381 0.00 0.00 41.41 4.75
4154 4685 0.912486 CTGATCCGACCTTTCCCCTT 59.088 55.000 0.00 0.00 0.00 3.95
4303 4834 2.168728 CTCTAGCCTACCCCAACTTGTC 59.831 54.545 0.00 0.00 0.00 3.18
4305 4836 0.693049 AGCCTACCCCAACTTGTCTG 59.307 55.000 0.00 0.00 0.00 3.51
4400 4940 3.934068 TGTGCTAGCCTAGGTTTGTTAC 58.066 45.455 13.29 9.58 0.00 2.50
4932 5473 4.691685 GCAGTCATCATTCATCCTCAGATC 59.308 45.833 0.00 0.00 0.00 2.75
5393 5934 7.723616 TCAAGGGAAAAGAGACATCACAAAATA 59.276 33.333 0.00 0.00 0.00 1.40
5474 6015 0.944386 ATTCAAGCGCACGTGAAAGT 59.056 45.000 22.23 6.93 45.38 2.66
5507 6048 6.072112 TCAAGGAAACCAAGAGAAAAATCG 57.928 37.500 0.00 0.00 0.00 3.34
5597 6138 3.109619 GCGACACTATACTGACTTGAGC 58.890 50.000 0.00 0.00 0.00 4.26
5632 6173 1.826385 AGGCATTCAAGGAAACCGAG 58.174 50.000 0.00 0.00 30.39 4.63
5636 6177 0.331616 ATTCAAGGAAACCGAGGGGG 59.668 55.000 0.00 0.00 43.62 5.40
5642 6183 0.330267 GGAAACCGAGGGGGAAATCA 59.670 55.000 0.00 0.00 39.97 2.57
5737 6278 2.736144 TGAGTAGTGGCGGTTAACAG 57.264 50.000 8.10 4.45 0.00 3.16
5743 6284 0.878416 GTGGCGGTTAACAGCATTCA 59.122 50.000 27.92 16.25 38.83 2.57
5827 6368 6.842676 AGTATTTTGTTCCCAGAGAGTTCTT 58.157 36.000 0.00 0.00 0.00 2.52
5896 6451 2.093075 ACTATCAGCTGCTCTGCAATGT 60.093 45.455 9.47 0.00 42.56 2.71
5990 6545 9.911138 TGTGTTATTGTATCTTGTAGACGTTTA 57.089 29.630 0.00 0.00 0.00 2.01
6023 6578 0.827368 TTTTTGTGTTCCTGTGGCCC 59.173 50.000 0.00 0.00 0.00 5.80
6047 6602 2.581637 GGGAACGAATTCTTGCGAAAC 58.418 47.619 3.52 0.00 34.98 2.78
6070 6625 2.486982 CCTGTTCTTCAGACATGCCTTG 59.513 50.000 0.00 0.00 46.27 3.61
6083 6638 3.117550 ACATGCCTTGGCATACTGGAATA 60.118 43.478 24.53 0.00 0.00 1.75
6115 6670 0.820891 CCTGAAATGCTATGCGGCCT 60.821 55.000 0.00 0.00 0.00 5.19
6228 6783 7.746703 ACAAGTCTTAGGGTTTAAGAGATGTT 58.253 34.615 0.00 0.00 33.47 2.71
6238 6793 5.410439 GGTTTAAGAGATGTTGCCGTTTCTA 59.590 40.000 0.00 0.00 0.00 2.10
6239 6794 6.304882 GTTTAAGAGATGTTGCCGTTTCTAC 58.695 40.000 0.00 0.00 0.00 2.59
6240 6795 3.963428 AGAGATGTTGCCGTTTCTACT 57.037 42.857 0.00 0.00 0.00 2.57
6241 6796 4.273148 AGAGATGTTGCCGTTTCTACTT 57.727 40.909 0.00 0.00 0.00 2.24
6242 6797 4.642429 AGAGATGTTGCCGTTTCTACTTT 58.358 39.130 0.00 0.00 0.00 2.66
6243 6798 5.790593 AGAGATGTTGCCGTTTCTACTTTA 58.209 37.500 0.00 0.00 0.00 1.85
6244 6799 6.228258 AGAGATGTTGCCGTTTCTACTTTAA 58.772 36.000 0.00 0.00 0.00 1.52
6245 6800 6.879458 AGAGATGTTGCCGTTTCTACTTTAAT 59.121 34.615 0.00 0.00 0.00 1.40
6246 6801 7.064728 AGAGATGTTGCCGTTTCTACTTTAATC 59.935 37.037 0.00 0.00 0.00 1.75
6247 6802 6.879458 AGATGTTGCCGTTTCTACTTTAATCT 59.121 34.615 0.00 0.00 0.00 2.40
6248 6803 6.236017 TGTTGCCGTTTCTACTTTAATCTG 57.764 37.500 0.00 0.00 0.00 2.90
6249 6804 5.761234 TGTTGCCGTTTCTACTTTAATCTGT 59.239 36.000 0.00 0.00 0.00 3.41
6250 6805 6.261381 TGTTGCCGTTTCTACTTTAATCTGTT 59.739 34.615 0.00 0.00 0.00 3.16
6251 6806 6.870971 TGCCGTTTCTACTTTAATCTGTTT 57.129 33.333 0.00 0.00 0.00 2.83
6252 6807 7.966246 TGCCGTTTCTACTTTAATCTGTTTA 57.034 32.000 0.00 0.00 0.00 2.01
6253 6808 8.025243 TGCCGTTTCTACTTTAATCTGTTTAG 57.975 34.615 0.00 0.00 0.00 1.85
6254 6809 7.118680 TGCCGTTTCTACTTTAATCTGTTTAGG 59.881 37.037 0.00 0.00 0.00 2.69
6255 6810 7.461918 CCGTTTCTACTTTAATCTGTTTAGGC 58.538 38.462 0.00 0.00 0.00 3.93
6256 6811 7.413767 CCGTTTCTACTTTAATCTGTTTAGGCC 60.414 40.741 0.00 0.00 0.00 5.19
6257 6812 7.333672 CGTTTCTACTTTAATCTGTTTAGGCCT 59.666 37.037 11.78 11.78 0.00 5.19
6258 6813 9.011095 GTTTCTACTTTAATCTGTTTAGGCCTT 57.989 33.333 12.58 0.00 0.00 4.35
6259 6814 8.788325 TTCTACTTTAATCTGTTTAGGCCTTC 57.212 34.615 12.58 2.55 0.00 3.46
6260 6815 8.147244 TCTACTTTAATCTGTTTAGGCCTTCT 57.853 34.615 12.58 0.00 0.00 2.85
6261 6816 8.603304 TCTACTTTAATCTGTTTAGGCCTTCTT 58.397 33.333 12.58 0.00 0.00 2.52
6262 6817 9.232473 CTACTTTAATCTGTTTAGGCCTTCTTT 57.768 33.333 12.58 0.00 0.00 2.52
6263 6818 7.886338 ACTTTAATCTGTTTAGGCCTTCTTTG 58.114 34.615 12.58 0.00 0.00 2.77
6264 6819 6.834168 TTAATCTGTTTAGGCCTTCTTTGG 57.166 37.500 12.58 0.00 0.00 3.28
6265 6820 3.876309 TCTGTTTAGGCCTTCTTTGGT 57.124 42.857 12.58 0.00 0.00 3.67
6266 6821 4.178956 TCTGTTTAGGCCTTCTTTGGTT 57.821 40.909 12.58 0.00 0.00 3.67
6267 6822 4.542697 TCTGTTTAGGCCTTCTTTGGTTT 58.457 39.130 12.58 0.00 0.00 3.27
6268 6823 4.340950 TCTGTTTAGGCCTTCTTTGGTTTG 59.659 41.667 12.58 0.00 0.00 2.93
6269 6824 3.386402 TGTTTAGGCCTTCTTTGGTTTGG 59.614 43.478 12.58 0.00 0.00 3.28
6270 6825 3.603965 TTAGGCCTTCTTTGGTTTGGA 57.396 42.857 12.58 0.00 0.00 3.53
6271 6826 2.001076 AGGCCTTCTTTGGTTTGGAG 57.999 50.000 0.00 0.00 0.00 3.86
6272 6827 0.969149 GGCCTTCTTTGGTTTGGAGG 59.031 55.000 0.00 0.00 0.00 4.30
6273 6828 1.480498 GGCCTTCTTTGGTTTGGAGGA 60.480 52.381 0.00 0.00 0.00 3.71
6274 6829 2.316108 GCCTTCTTTGGTTTGGAGGAA 58.684 47.619 0.00 0.00 0.00 3.36
6275 6830 2.899900 GCCTTCTTTGGTTTGGAGGAAT 59.100 45.455 0.00 0.00 0.00 3.01
6276 6831 3.324846 GCCTTCTTTGGTTTGGAGGAATT 59.675 43.478 0.00 0.00 0.00 2.17
6277 6832 4.202357 GCCTTCTTTGGTTTGGAGGAATTT 60.202 41.667 0.00 0.00 0.00 1.82
6278 6833 5.687441 GCCTTCTTTGGTTTGGAGGAATTTT 60.687 40.000 0.00 0.00 0.00 1.82
6279 6834 6.463755 GCCTTCTTTGGTTTGGAGGAATTTTA 60.464 38.462 0.00 0.00 0.00 1.52
6280 6835 7.679783 CCTTCTTTGGTTTGGAGGAATTTTAT 58.320 34.615 0.00 0.00 0.00 1.40
6281 6836 8.811994 CCTTCTTTGGTTTGGAGGAATTTTATA 58.188 33.333 0.00 0.00 0.00 0.98
6282 6837 9.860898 CTTCTTTGGTTTGGAGGAATTTTATAG 57.139 33.333 0.00 0.00 0.00 1.31
6283 6838 8.361169 TCTTTGGTTTGGAGGAATTTTATAGG 57.639 34.615 0.00 0.00 0.00 2.57
6284 6839 8.174085 TCTTTGGTTTGGAGGAATTTTATAGGA 58.826 33.333 0.00 0.00 0.00 2.94
6285 6840 8.728596 TTTGGTTTGGAGGAATTTTATAGGAA 57.271 30.769 0.00 0.00 0.00 3.36
6286 6841 8.909423 TTGGTTTGGAGGAATTTTATAGGAAT 57.091 30.769 0.00 0.00 0.00 3.01
6287 6842 8.909423 TGGTTTGGAGGAATTTTATAGGAATT 57.091 30.769 0.00 0.00 0.00 2.17
6288 6843 8.977412 TGGTTTGGAGGAATTTTATAGGAATTC 58.023 33.333 12.05 12.05 40.88 2.17
6289 6844 9.201989 GGTTTGGAGGAATTTTATAGGAATTCT 57.798 33.333 16.67 0.00 41.19 2.40
6337 6892 5.784578 TTTTCTTTAGAGCCCTTTGGTTC 57.215 39.130 0.00 0.00 41.91 3.62
6338 6893 4.447138 TTCTTTAGAGCCCTTTGGTTCA 57.553 40.909 0.00 0.00 43.89 3.18
6339 6894 4.657814 TCTTTAGAGCCCTTTGGTTCAT 57.342 40.909 0.00 0.00 43.89 2.57
6340 6895 5.772393 TCTTTAGAGCCCTTTGGTTCATA 57.228 39.130 0.00 0.00 43.89 2.15
6341 6896 5.745227 TCTTTAGAGCCCTTTGGTTCATAG 58.255 41.667 0.00 0.00 43.89 2.23
6342 6897 4.503714 TTAGAGCCCTTTGGTTCATAGG 57.496 45.455 0.00 0.00 43.89 2.57
6343 6898 2.562296 AGAGCCCTTTGGTTCATAGGA 58.438 47.619 6.07 0.00 43.89 2.94
6344 6899 2.919602 AGAGCCCTTTGGTTCATAGGAA 59.080 45.455 6.07 0.00 43.89 3.36
6345 6900 3.529319 AGAGCCCTTTGGTTCATAGGAAT 59.471 43.478 6.07 0.00 43.89 3.01
6346 6901 3.633986 GAGCCCTTTGGTTCATAGGAATG 59.366 47.826 6.07 0.00 41.28 2.67
6347 6902 2.695147 GCCCTTTGGTTCATAGGAATGG 59.305 50.000 6.07 0.00 35.14 3.16
6348 6903 3.627237 GCCCTTTGGTTCATAGGAATGGA 60.627 47.826 6.07 0.00 35.14 3.41
6349 6904 4.808042 CCCTTTGGTTCATAGGAATGGAT 58.192 43.478 6.07 0.00 35.14 3.41
6350 6905 5.211201 CCCTTTGGTTCATAGGAATGGATT 58.789 41.667 6.07 0.00 35.14 3.01
6351 6906 5.302823 CCCTTTGGTTCATAGGAATGGATTC 59.697 44.000 6.07 0.00 35.14 2.52
6390 6945 8.712228 GGATTGGTTCCTATCCTTCATATTTT 57.288 34.615 19.71 0.00 41.78 1.82
6391 6946 9.807921 GGATTGGTTCCTATCCTTCATATTTTA 57.192 33.333 19.71 0.00 41.78 1.52
6417 6972 9.700831 ATAGGAAAATAAAAATGAGCCTACACT 57.299 29.630 0.00 0.00 30.34 3.55
6418 6973 8.056407 AGGAAAATAAAAATGAGCCTACACTC 57.944 34.615 0.00 0.00 37.19 3.51
6449 7004 8.750515 AAAAATTCCTTTGATGTCAACCAAAT 57.249 26.923 0.00 0.00 35.28 2.32
6450 7005 7.733402 AAATTCCTTTGATGTCAACCAAATG 57.267 32.000 0.00 3.42 35.28 2.32
6451 7006 6.669125 ATTCCTTTGATGTCAACCAAATGA 57.331 33.333 0.00 5.19 35.28 2.57
6463 7018 5.285651 TCAACCAAATGACATTTCGTTTCC 58.714 37.500 17.85 0.00 38.66 3.13
6464 7019 5.068460 TCAACCAAATGACATTTCGTTTCCT 59.932 36.000 17.85 0.00 38.66 3.36
6465 7020 6.263392 TCAACCAAATGACATTTCGTTTCCTA 59.737 34.615 17.85 5.30 38.66 2.94
6466 7021 6.834168 ACCAAATGACATTTCGTTTCCTAT 57.166 33.333 10.52 0.00 38.66 2.57
6467 7022 7.227049 ACCAAATGACATTTCGTTTCCTATT 57.773 32.000 10.52 0.00 38.66 1.73
6468 7023 7.312899 ACCAAATGACATTTCGTTTCCTATTC 58.687 34.615 10.52 0.00 38.66 1.75
6469 7024 6.751888 CCAAATGACATTTCGTTTCCTATTCC 59.248 38.462 10.52 0.00 38.66 3.01
6470 7025 7.362920 CCAAATGACATTTCGTTTCCTATTCCT 60.363 37.037 10.52 0.00 38.66 3.36
6471 7026 8.673711 CAAATGACATTTCGTTTCCTATTCCTA 58.326 33.333 10.52 0.00 38.66 2.94
6472 7027 7.787725 ATGACATTTCGTTTCCTATTCCTAC 57.212 36.000 0.00 0.00 0.00 3.18
6473 7028 6.942976 TGACATTTCGTTTCCTATTCCTACT 58.057 36.000 0.00 0.00 0.00 2.57
6474 7029 7.039882 TGACATTTCGTTTCCTATTCCTACTC 58.960 38.462 0.00 0.00 0.00 2.59
6475 7030 6.942976 ACATTTCGTTTCCTATTCCTACTCA 58.057 36.000 0.00 0.00 0.00 3.41
6476 7031 7.565680 ACATTTCGTTTCCTATTCCTACTCAT 58.434 34.615 0.00 0.00 0.00 2.90
6477 7032 8.701895 ACATTTCGTTTCCTATTCCTACTCATA 58.298 33.333 0.00 0.00 0.00 2.15
6478 7033 9.197694 CATTTCGTTTCCTATTCCTACTCATAG 57.802 37.037 0.00 0.00 0.00 2.23
6495 7050 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
6496 7051 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
6497 7052 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
6498 7053 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
6499 7054 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
6500 7055 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
6509 7064 8.755696 GAGATACATGTCATCTCATTTCCTAC 57.244 38.462 24.95 8.46 45.17 3.18
6510 7065 8.255111 AGATACATGTCATCTCATTTCCTACA 57.745 34.615 0.00 0.00 0.00 2.74
6511 7066 8.708378 AGATACATGTCATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 0.00 2.41
6512 7067 9.330063 GATACATGTCATCTCATTTCCTACAAA 57.670 33.333 0.00 0.00 0.00 2.83
6513 7068 9.685276 ATACATGTCATCTCATTTCCTACAAAA 57.315 29.630 0.00 0.00 0.00 2.44
6514 7069 8.585471 ACATGTCATCTCATTTCCTACAAAAT 57.415 30.769 0.00 0.00 0.00 1.82
6515 7070 9.028284 ACATGTCATCTCATTTCCTACAAAATT 57.972 29.630 0.00 0.00 0.00 1.82
6516 7071 9.512435 CATGTCATCTCATTTCCTACAAAATTC 57.488 33.333 0.00 0.00 0.00 2.17
6517 7072 8.055279 TGTCATCTCATTTCCTACAAAATTCC 57.945 34.615 0.00 0.00 0.00 3.01
6518 7073 7.890127 TGTCATCTCATTTCCTACAAAATTCCT 59.110 33.333 0.00 0.00 0.00 3.36
6519 7074 9.396022 GTCATCTCATTTCCTACAAAATTCCTA 57.604 33.333 0.00 0.00 0.00 2.94
6528 7083 9.947433 TTTCCTACAAAATTCCTATTTCTACGA 57.053 29.630 0.00 0.00 32.85 3.43
6540 7095 9.992442 TTCCTATTTCTACGATAATCCTATCCT 57.008 33.333 0.00 0.00 31.68 3.24
6556 7111 6.773638 TCCTATCCTATGAATCAAAAGAGGC 58.226 40.000 0.00 0.00 0.00 4.70
6557 7112 5.942826 CCTATCCTATGAATCAAAAGAGGCC 59.057 44.000 0.00 0.00 0.00 5.19
6558 7113 5.659849 ATCCTATGAATCAAAAGAGGCCT 57.340 39.130 3.86 3.86 0.00 5.19
6559 7114 6.770286 ATCCTATGAATCAAAAGAGGCCTA 57.230 37.500 4.42 0.00 0.00 3.93
6560 7115 6.575244 TCCTATGAATCAAAAGAGGCCTAA 57.425 37.500 4.42 0.00 0.00 2.69
6561 7116 6.357367 TCCTATGAATCAAAAGAGGCCTAAC 58.643 40.000 4.42 0.00 0.00 2.34
6562 7117 6.158695 TCCTATGAATCAAAAGAGGCCTAACT 59.841 38.462 4.42 0.00 0.00 2.24
6563 7118 6.830838 CCTATGAATCAAAAGAGGCCTAACTT 59.169 38.462 4.42 2.20 0.00 2.66
6564 7119 7.340487 CCTATGAATCAAAAGAGGCCTAACTTT 59.660 37.037 4.42 9.74 37.85 2.66
6565 7120 6.976934 TGAATCAAAAGAGGCCTAACTTTT 57.023 33.333 20.98 20.98 43.89 2.27
6566 7121 7.360113 TGAATCAAAAGAGGCCTAACTTTTT 57.640 32.000 23.10 16.30 42.08 1.94
6589 7144 8.997621 TTTTGGTCTGTCTCTGTATGTATAAC 57.002 34.615 0.00 0.00 0.00 1.89
6590 7145 6.710597 TGGTCTGTCTCTGTATGTATAACC 57.289 41.667 0.00 0.00 0.00 2.85
6591 7146 6.192044 TGGTCTGTCTCTGTATGTATAACCA 58.808 40.000 0.00 0.00 0.00 3.67
6592 7147 6.666113 TGGTCTGTCTCTGTATGTATAACCAA 59.334 38.462 0.00 0.00 0.00 3.67
6593 7148 7.147897 TGGTCTGTCTCTGTATGTATAACCAAG 60.148 40.741 0.00 0.00 0.00 3.61
6594 7149 6.697892 GTCTGTCTCTGTATGTATAACCAAGC 59.302 42.308 0.00 0.00 0.00 4.01
6595 7150 6.379988 TCTGTCTCTGTATGTATAACCAAGCA 59.620 38.462 0.00 0.00 0.00 3.91
6596 7151 6.941857 TGTCTCTGTATGTATAACCAAGCAA 58.058 36.000 0.00 0.00 0.00 3.91
6597 7152 7.390823 TGTCTCTGTATGTATAACCAAGCAAA 58.609 34.615 0.00 0.00 0.00 3.68
6598 7153 8.046708 TGTCTCTGTATGTATAACCAAGCAAAT 58.953 33.333 0.00 0.00 0.00 2.32
6599 7154 9.542462 GTCTCTGTATGTATAACCAAGCAAATA 57.458 33.333 0.00 0.00 0.00 1.40
6600 7155 9.764363 TCTCTGTATGTATAACCAAGCAAATAG 57.236 33.333 0.00 0.00 0.00 1.73
6601 7156 8.902540 TCTGTATGTATAACCAAGCAAATAGG 57.097 34.615 0.00 0.00 0.00 2.57
6602 7157 7.936847 TCTGTATGTATAACCAAGCAAATAGGG 59.063 37.037 0.00 0.00 0.00 3.53
6603 7158 7.807198 TGTATGTATAACCAAGCAAATAGGGA 58.193 34.615 0.00 0.00 0.00 4.20
6604 7159 8.444783 TGTATGTATAACCAAGCAAATAGGGAT 58.555 33.333 0.00 0.00 0.00 3.85
6605 7160 7.765695 ATGTATAACCAAGCAAATAGGGATG 57.234 36.000 0.00 0.00 0.00 3.51
6606 7161 6.068010 TGTATAACCAAGCAAATAGGGATGG 58.932 40.000 0.00 0.00 0.00 3.51
6607 7162 3.756082 AACCAAGCAAATAGGGATGGA 57.244 42.857 0.00 0.00 0.00 3.41
6608 7163 3.756082 ACCAAGCAAATAGGGATGGAA 57.244 42.857 0.00 0.00 0.00 3.53
6609 7164 4.270317 ACCAAGCAAATAGGGATGGAAT 57.730 40.909 0.00 0.00 0.00 3.01
6610 7165 4.623863 ACCAAGCAAATAGGGATGGAATT 58.376 39.130 0.00 0.00 0.00 2.17
6611 7166 4.651045 ACCAAGCAAATAGGGATGGAATTC 59.349 41.667 0.00 0.00 0.00 2.17
6612 7167 4.650588 CCAAGCAAATAGGGATGGAATTCA 59.349 41.667 7.93 0.00 0.00 2.57
6613 7168 5.129155 CCAAGCAAATAGGGATGGAATTCAA 59.871 40.000 7.93 0.00 0.00 2.69
6614 7169 6.278363 CAAGCAAATAGGGATGGAATTCAAG 58.722 40.000 7.93 0.00 0.00 3.02
6615 7170 4.343239 AGCAAATAGGGATGGAATTCAAGC 59.657 41.667 7.93 0.00 0.00 4.01
6616 7171 4.502087 GCAAATAGGGATGGAATTCAAGCC 60.502 45.833 8.76 8.76 0.00 4.35
6617 7172 2.638480 TAGGGATGGAATTCAAGCCG 57.362 50.000 11.02 0.00 0.00 5.52
6618 7173 0.918983 AGGGATGGAATTCAAGCCGA 59.081 50.000 11.02 0.00 0.00 5.54
6619 7174 1.133976 AGGGATGGAATTCAAGCCGAG 60.134 52.381 11.02 0.00 0.00 4.63
6620 7175 1.408822 GGGATGGAATTCAAGCCGAGT 60.409 52.381 11.02 0.00 0.00 4.18
6621 7176 1.943340 GGATGGAATTCAAGCCGAGTC 59.057 52.381 0.25 0.00 0.00 3.36
6622 7177 1.594862 GATGGAATTCAAGCCGAGTCG 59.405 52.381 5.29 5.29 0.00 4.18
6642 7197 4.544689 CCAGCTCGGCTCGACTCG 62.545 72.222 0.00 0.00 36.40 4.18
6645 7200 3.574445 GCTCGGCTCGACTCGCTA 61.574 66.667 0.00 0.00 0.00 4.26
6646 7201 3.099438 CTCGGCTCGACTCGCTAA 58.901 61.111 0.00 0.00 0.00 3.09
6647 7202 1.428219 CTCGGCTCGACTCGCTAAA 59.572 57.895 0.00 0.00 0.00 1.85
6648 7203 0.590230 CTCGGCTCGACTCGCTAAAG 60.590 60.000 0.00 0.00 0.00 1.85
6649 7204 2.224885 CGGCTCGACTCGCTAAAGC 61.225 63.158 2.08 2.08 37.78 3.51
6650 7205 1.139947 GGCTCGACTCGCTAAAGCT 59.860 57.895 9.08 0.00 39.32 3.74
6651 7206 0.868177 GGCTCGACTCGCTAAAGCTC 60.868 60.000 9.08 0.00 39.32 4.09
6652 7207 0.179161 GCTCGACTCGCTAAAGCTCA 60.179 55.000 0.00 0.00 39.32 4.26
6653 7208 1.535015 GCTCGACTCGCTAAAGCTCAT 60.535 52.381 0.00 0.00 39.32 2.90
6654 7209 2.803451 CTCGACTCGCTAAAGCTCATT 58.197 47.619 0.00 0.00 39.32 2.57
6655 7210 3.182967 CTCGACTCGCTAAAGCTCATTT 58.817 45.455 0.00 0.00 39.32 2.32
6656 7211 3.179830 TCGACTCGCTAAAGCTCATTTC 58.820 45.455 0.00 0.00 39.32 2.17
6657 7212 2.923655 CGACTCGCTAAAGCTCATTTCA 59.076 45.455 0.00 0.00 39.32 2.69
6658 7213 3.553511 CGACTCGCTAAAGCTCATTTCAT 59.446 43.478 0.00 0.00 39.32 2.57
6659 7214 4.033358 CGACTCGCTAAAGCTCATTTCATT 59.967 41.667 0.00 0.00 39.32 2.57
6660 7215 5.232202 CGACTCGCTAAAGCTCATTTCATTA 59.768 40.000 0.00 0.00 39.32 1.90
6661 7216 6.237835 CGACTCGCTAAAGCTCATTTCATTAA 60.238 38.462 0.00 0.00 39.32 1.40
6662 7217 6.776094 ACTCGCTAAAGCTCATTTCATTAAC 58.224 36.000 0.00 0.00 39.32 2.01
6663 7218 5.795766 TCGCTAAAGCTCATTTCATTAACG 58.204 37.500 0.00 0.00 39.32 3.18
6664 7219 5.579119 TCGCTAAAGCTCATTTCATTAACGA 59.421 36.000 0.00 0.00 39.32 3.85
6665 7220 5.898606 CGCTAAAGCTCATTTCATTAACGAG 59.101 40.000 0.00 0.00 39.32 4.18
6670 7225 4.767075 GCTCATTTCATTAACGAGCTAGC 58.233 43.478 6.62 6.62 44.47 3.42
6671 7226 4.509600 GCTCATTTCATTAACGAGCTAGCT 59.490 41.667 19.45 19.45 44.47 3.32
6672 7227 5.007136 GCTCATTTCATTAACGAGCTAGCTT 59.993 40.000 20.42 5.57 44.47 3.74
6673 7228 6.349973 TCATTTCATTAACGAGCTAGCTTG 57.650 37.500 27.42 27.42 0.00 4.01
6674 7229 6.106003 TCATTTCATTAACGAGCTAGCTTGA 58.894 36.000 34.10 22.05 0.00 3.02
6675 7230 5.779806 TTTCATTAACGAGCTAGCTTGAC 57.220 39.130 34.10 14.76 0.00 3.18
6676 7231 4.720649 TCATTAACGAGCTAGCTTGACT 57.279 40.909 34.10 22.80 0.00 3.41
6677 7232 4.673441 TCATTAACGAGCTAGCTTGACTC 58.327 43.478 34.10 14.24 0.00 3.36
6682 7237 2.468532 GAGCTAGCTTGACTCGACTC 57.531 55.000 20.42 0.00 0.00 3.36
6683 7238 0.730265 AGCTAGCTTGACTCGACTCG 59.270 55.000 12.68 0.00 0.00 4.18
6684 7239 0.448593 GCTAGCTTGACTCGACTCGT 59.551 55.000 7.70 0.00 0.00 4.18
6685 7240 1.135632 GCTAGCTTGACTCGACTCGTT 60.136 52.381 7.70 0.00 0.00 3.85
6686 7241 2.510874 CTAGCTTGACTCGACTCGTTG 58.489 52.381 0.00 0.00 0.00 4.10
6687 7242 0.664767 AGCTTGACTCGACTCGTTGC 60.665 55.000 0.00 0.00 0.00 4.17
6688 7243 0.664767 GCTTGACTCGACTCGTTGCT 60.665 55.000 0.00 0.00 0.00 3.91
6689 7244 1.401148 GCTTGACTCGACTCGTTGCTA 60.401 52.381 0.00 0.00 0.00 3.49
6690 7245 2.732597 GCTTGACTCGACTCGTTGCTAT 60.733 50.000 0.00 0.00 0.00 2.97
6691 7246 3.487042 GCTTGACTCGACTCGTTGCTATA 60.487 47.826 0.00 0.00 0.00 1.31
6692 7247 4.659088 CTTGACTCGACTCGTTGCTATAA 58.341 43.478 0.00 0.00 0.00 0.98
6693 7248 4.895224 TGACTCGACTCGTTGCTATAAT 57.105 40.909 0.00 0.00 0.00 1.28
6694 7249 4.598062 TGACTCGACTCGTTGCTATAATG 58.402 43.478 0.00 0.00 0.00 1.90
6695 7250 4.334481 TGACTCGACTCGTTGCTATAATGA 59.666 41.667 0.00 0.00 0.00 2.57
6696 7251 4.849883 ACTCGACTCGTTGCTATAATGAG 58.150 43.478 7.20 7.20 38.80 2.90
6697 7252 4.335874 ACTCGACTCGTTGCTATAATGAGT 59.664 41.667 12.79 12.79 46.05 3.41
6698 7253 5.163642 ACTCGACTCGTTGCTATAATGAGTT 60.164 40.000 13.80 0.00 44.12 3.01
6699 7254 5.271625 TCGACTCGTTGCTATAATGAGTTC 58.728 41.667 13.80 8.00 44.12 3.01
6700 7255 5.034797 CGACTCGTTGCTATAATGAGTTCA 58.965 41.667 13.80 0.00 44.12 3.18
6701 7256 5.515270 CGACTCGTTGCTATAATGAGTTCAA 59.485 40.000 13.80 0.00 44.12 2.69
6702 7257 6.034577 CGACTCGTTGCTATAATGAGTTCAAA 59.965 38.462 13.80 0.00 44.12 2.69
6703 7258 7.254117 CGACTCGTTGCTATAATGAGTTCAAAT 60.254 37.037 13.80 0.00 44.12 2.32
6704 7259 7.910304 ACTCGTTGCTATAATGAGTTCAAATC 58.090 34.615 8.32 0.00 42.15 2.17
6705 7260 7.011482 ACTCGTTGCTATAATGAGTTCAAATCC 59.989 37.037 8.32 0.00 42.15 3.01
6706 7261 6.821160 TCGTTGCTATAATGAGTTCAAATCCA 59.179 34.615 0.00 0.00 0.00 3.41
6707 7262 7.498900 TCGTTGCTATAATGAGTTCAAATCCAT 59.501 33.333 0.00 0.00 0.00 3.41
6708 7263 7.588854 CGTTGCTATAATGAGTTCAAATCCATG 59.411 37.037 0.00 0.00 0.00 3.66
6709 7264 8.623903 GTTGCTATAATGAGTTCAAATCCATGA 58.376 33.333 0.00 0.00 0.00 3.07
6710 7265 8.929260 TGCTATAATGAGTTCAAATCCATGAT 57.071 30.769 0.00 0.00 0.00 2.45
6711 7266 9.358406 TGCTATAATGAGTTCAAATCCATGATT 57.642 29.630 0.00 0.00 33.25 2.57
6712 7267 9.622004 GCTATAATGAGTTCAAATCCATGATTG 57.378 33.333 0.00 0.00 32.14 2.67
6714 7269 4.724074 TGAGTTCAAATCCATGATTGGC 57.276 40.909 0.00 0.00 43.29 4.52
6715 7270 4.346730 TGAGTTCAAATCCATGATTGGCT 58.653 39.130 0.00 0.00 43.29 4.75
6716 7271 4.400251 TGAGTTCAAATCCATGATTGGCTC 59.600 41.667 0.00 8.69 43.29 4.70
6717 7272 3.379372 AGTTCAAATCCATGATTGGCTCG 59.621 43.478 0.00 0.00 43.29 5.03
6718 7273 3.280197 TCAAATCCATGATTGGCTCGA 57.720 42.857 0.00 0.00 43.29 4.04
6719 7274 2.945008 TCAAATCCATGATTGGCTCGAC 59.055 45.455 0.00 0.00 43.29 4.20
6720 7275 2.947652 CAAATCCATGATTGGCTCGACT 59.052 45.455 0.00 0.00 43.29 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
552 553 2.813474 TCCGGCGTCATTGAAGCG 60.813 61.111 16.57 12.15 37.89 4.68
729 730 3.061260 GCGACTCCACCTACCGTCC 62.061 68.421 0.00 0.00 0.00 4.79
731 732 3.437795 CGCGACTCCACCTACCGT 61.438 66.667 0.00 0.00 0.00 4.83
732 733 4.849329 GCGCGACTCCACCTACCG 62.849 72.222 12.10 0.00 0.00 4.02
814 815 5.825679 TCCGCACCAAATAAATAGCAATAGT 59.174 36.000 0.00 0.00 0.00 2.12
815 816 6.312399 TCCGCACCAAATAAATAGCAATAG 57.688 37.500 0.00 0.00 0.00 1.73
816 817 6.714810 AGATCCGCACCAAATAAATAGCAATA 59.285 34.615 0.00 0.00 0.00 1.90
817 818 5.536161 AGATCCGCACCAAATAAATAGCAAT 59.464 36.000 0.00 0.00 0.00 3.56
818 819 4.887071 AGATCCGCACCAAATAAATAGCAA 59.113 37.500 0.00 0.00 0.00 3.91
819 820 4.460263 AGATCCGCACCAAATAAATAGCA 58.540 39.130 0.00 0.00 0.00 3.49
820 821 5.122396 CCTAGATCCGCACCAAATAAATAGC 59.878 44.000 0.00 0.00 0.00 2.97
821 822 6.231211 ACCTAGATCCGCACCAAATAAATAG 58.769 40.000 0.00 0.00 0.00 1.73
822 823 6.182507 ACCTAGATCCGCACCAAATAAATA 57.817 37.500 0.00 0.00 0.00 1.40
833 836 1.480954 GAGTCCAAACCTAGATCCGCA 59.519 52.381 0.00 0.00 0.00 5.69
953 962 2.581354 CTCGCAACTCCCAGAGGG 59.419 66.667 0.00 0.00 46.11 4.30
954 963 2.581354 CCTCGCAACTCCCAGAGG 59.419 66.667 0.00 0.00 43.43 3.69
958 967 2.528127 TTCCCCTCGCAACTCCCA 60.528 61.111 0.00 0.00 0.00 4.37
960 969 2.436824 GCTTCCCCTCGCAACTCC 60.437 66.667 0.00 0.00 0.00 3.85
962 971 2.185310 ATTCGCTTCCCCTCGCAACT 62.185 55.000 0.00 0.00 0.00 3.16
964 973 1.002624 AATTCGCTTCCCCTCGCAA 60.003 52.632 0.00 0.00 0.00 4.85
965 974 1.745115 CAATTCGCTTCCCCTCGCA 60.745 57.895 0.00 0.00 0.00 5.10
966 975 1.745489 ACAATTCGCTTCCCCTCGC 60.745 57.895 0.00 0.00 0.00 5.03
967 976 1.369091 CCACAATTCGCTTCCCCTCG 61.369 60.000 0.00 0.00 0.00 4.63
979 1390 4.060667 CGCCCCCTCCCCACAATT 62.061 66.667 0.00 0.00 0.00 2.32
1336 1749 8.196771 CCATGAGCTGATAATAGAAGTCTATCC 58.803 40.741 0.00 0.00 38.15 2.59
1346 1759 4.283363 AGTGCCCATGAGCTGATAATAG 57.717 45.455 0.00 0.00 0.00 1.73
1471 1884 8.299990 AGCTCTAGTTTATGCTATTATCCGAT 57.700 34.615 0.00 0.00 33.64 4.18
1472 1885 7.704578 AGCTCTAGTTTATGCTATTATCCGA 57.295 36.000 0.00 0.00 33.64 4.55
1473 1886 8.764524 AAAGCTCTAGTTTATGCTATTATCCG 57.235 34.615 0.00 0.00 35.09 4.18
1477 1890 9.982651 CCAGTAAAGCTCTAGTTTATGCTATTA 57.017 33.333 0.00 0.00 35.09 0.98
1484 1912 6.869206 TGACCCAGTAAAGCTCTAGTTTAT 57.131 37.500 0.00 0.00 0.00 1.40
1544 1977 1.659954 GCGGAACAAAATGCGTGCA 60.660 52.632 0.00 0.00 36.44 4.57
1593 2026 8.855110 TGACTAAAATAAAGCAATGTCTTTGGA 58.145 29.630 11.12 0.00 36.95 3.53
1615 2048 8.280258 TCATGGGAATTAGGAAGATAATGACT 57.720 34.615 0.00 0.00 0.00 3.41
1630 2063 7.709302 TGAAACTTCAGCCATTCATGGGAATT 61.709 38.462 7.96 0.00 39.21 2.17
1631 2064 6.280289 TGAAACTTCAGCCATTCATGGGAAT 61.280 40.000 7.96 0.00 39.21 3.01
1632 2065 4.996327 TGAAACTTCAGCCATTCATGGGAA 60.996 41.667 7.96 3.20 39.21 3.97
1633 2066 3.500108 TGAAACTTCAGCCATTCATGGGA 60.500 43.478 7.96 0.00 39.21 4.37
1737 2170 1.643811 AGTTAAGGGGCTGGCCAATAA 59.356 47.619 22.68 16.16 37.98 1.40
1820 2260 2.038557 GCCATAAAATCGGGGAGCTCTA 59.961 50.000 14.64 0.00 0.00 2.43
1848 2288 3.539563 CGCTGTTTTGAACATCGCTAATG 59.460 43.478 4.46 0.00 42.84 1.90
1900 2341 6.386927 TCTGAAGGACATAGTTGATATTGGGT 59.613 38.462 0.00 0.00 0.00 4.51
1901 2342 6.830912 TCTGAAGGACATAGTTGATATTGGG 58.169 40.000 0.00 0.00 0.00 4.12
2063 2511 6.204688 TGGATATAATTGTGGCGAGAATTGTC 59.795 38.462 13.11 8.63 0.00 3.18
2082 2531 0.937304 GACGCACGTTGCATGGATAT 59.063 50.000 9.95 0.00 45.36 1.63
2089 2538 2.706432 CAGTTGACGCACGTTGCA 59.294 55.556 9.95 0.00 45.36 4.08
2092 2541 1.153529 TGACCAGTTGACGCACGTT 60.154 52.632 0.00 0.00 0.00 3.99
2111 2560 4.744570 TCACAATAGTTCAAGCTACTCCG 58.255 43.478 0.00 0.00 0.00 4.63
2115 2564 5.005779 CGGTGATCACAATAGTTCAAGCTAC 59.994 44.000 26.47 3.16 0.00 3.58
2181 2630 2.239400 ACCACAGGAAAGCCTAAAAGC 58.761 47.619 0.00 0.00 44.80 3.51
2182 2631 6.590234 ATTAACCACAGGAAAGCCTAAAAG 57.410 37.500 0.00 0.00 44.80 2.27
2326 2775 1.757118 CCATAGAGAAAGCGAGTGGGA 59.243 52.381 0.00 0.00 0.00 4.37
2368 2817 4.025360 CAGTCATTCATGGGAATTGGGAA 58.975 43.478 0.00 0.00 41.78 3.97
2402 2851 6.382608 GCAAAATTCCTCTTTCCTTCAGTAC 58.617 40.000 0.00 0.00 0.00 2.73
2487 2936 6.206634 ACTGCGATGAAATTAAGAAAAGGACA 59.793 34.615 0.00 0.00 0.00 4.02
2548 2998 1.693606 TCTTGGCTGAGTGTCATGACA 59.306 47.619 24.56 24.56 39.32 3.58
2556 3006 0.397941 TGGGAGTTCTTGGCTGAGTG 59.602 55.000 0.00 0.00 0.00 3.51
2565 3015 4.149598 AGCCGTAAAATTTGGGAGTTCTT 58.850 39.130 7.23 0.00 0.00 2.52
2644 3094 5.659048 GAAGAATTCGATTATTCACGCCT 57.341 39.130 11.42 0.00 39.57 5.52
2751 3201 3.244700 CCCAAGTTCAGACAGGACAAGAT 60.245 47.826 0.00 0.00 0.00 2.40
2768 3218 9.131791 ACTAGGCAATATATTTAACAACCCAAG 57.868 33.333 0.00 0.00 0.00 3.61
2818 3268 7.920682 GTGACAAACAAGTGTATTTCCTCATTT 59.079 33.333 0.00 0.00 0.00 2.32
2819 3269 7.425606 GTGACAAACAAGTGTATTTCCTCATT 58.574 34.615 0.00 0.00 0.00 2.57
2846 3296 6.072175 AGTGTTCTTAGTCTAAGTGCAGAGAG 60.072 42.308 17.35 0.00 37.10 3.20
2866 3317 3.067106 CGTGCTGGTTAGATTGAGTGTT 58.933 45.455 0.00 0.00 0.00 3.32
2884 3335 0.179134 GGCAGCTACCAGAGTACGTG 60.179 60.000 0.00 0.00 0.00 4.49
2885 3336 0.611062 TGGCAGCTACCAGAGTACGT 60.611 55.000 0.00 0.00 33.75 3.57
2886 3337 0.530744 TTGGCAGCTACCAGAGTACG 59.469 55.000 5.64 0.00 41.82 3.67
2887 3338 1.550976 AGTTGGCAGCTACCAGAGTAC 59.449 52.381 5.64 1.42 41.82 2.73
2892 3343 0.392193 CCAGAGTTGGCAGCTACCAG 60.392 60.000 5.64 0.00 41.82 4.00
3080 3531 2.039787 TATCCAGGTGGGCGGACA 59.960 61.111 0.00 0.00 36.21 4.02
3165 3616 0.460987 GCAGCTACAGCATCTTCGGT 60.461 55.000 3.70 0.00 45.16 4.69
3241 3769 0.604511 GCTTTTTCGGACGGAGGGAA 60.605 55.000 0.00 0.00 0.00 3.97
3242 3770 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
3243 3771 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
3244 3772 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
3245 3773 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
3246 3774 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
3247 3775 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
3248 3776 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
3249 3777 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
3250 3778 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
3251 3779 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
3252 3780 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
3253 3781 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
3254 3782 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
3255 3783 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
3256 3784 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
3257 3785 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
3258 3786 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
3259 3787 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
3260 3788 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
3261 3789 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
3262 3790 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
3263 3791 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
3264 3792 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
3265 3793 5.233083 TGCTAGATACATCCATTTGAGGG 57.767 43.478 0.00 0.00 0.00 4.30
3266 3794 6.470278 TGATGCTAGATACATCCATTTGAGG 58.530 40.000 0.00 0.00 42.68 3.86
3267 3795 7.660617 ACTTGATGCTAGATACATCCATTTGAG 59.339 37.037 0.00 0.00 42.68 3.02
3268 3796 7.512130 ACTTGATGCTAGATACATCCATTTGA 58.488 34.615 0.00 0.00 42.68 2.69
3269 3797 7.741027 ACTTGATGCTAGATACATCCATTTG 57.259 36.000 0.00 0.00 42.68 2.32
3270 3798 9.499479 CTAACTTGATGCTAGATACATCCATTT 57.501 33.333 0.00 0.00 42.68 2.32
3271 3799 8.654997 ACTAACTTGATGCTAGATACATCCATT 58.345 33.333 0.00 0.00 42.68 3.16
3272 3800 8.093307 CACTAACTTGATGCTAGATACATCCAT 58.907 37.037 0.00 0.00 42.68 3.41
3273 3801 7.436933 CACTAACTTGATGCTAGATACATCCA 58.563 38.462 0.00 0.00 42.68 3.41
3274 3802 6.367422 GCACTAACTTGATGCTAGATACATCC 59.633 42.308 0.00 0.00 42.68 3.51
3275 3803 7.344910 GCACTAACTTGATGCTAGATACATC 57.655 40.000 0.00 0.00 43.46 3.06
3285 3813 7.439356 TGAATGTATCTAGCACTAACTTGATGC 59.561 37.037 0.00 0.00 39.74 3.91
3286 3814 8.877808 TGAATGTATCTAGCACTAACTTGATG 57.122 34.615 0.00 0.00 34.60 3.07
3288 3816 9.890629 AAATGAATGTATCTAGCACTAACTTGA 57.109 29.630 0.00 0.00 0.00 3.02
3289 3817 9.926751 CAAATGAATGTATCTAGCACTAACTTG 57.073 33.333 0.00 0.00 0.00 3.16
3290 3818 9.890629 TCAAATGAATGTATCTAGCACTAACTT 57.109 29.630 0.00 0.00 0.00 2.66
3291 3819 9.539825 CTCAAATGAATGTATCTAGCACTAACT 57.460 33.333 0.00 0.00 0.00 2.24
3292 3820 8.768955 CCTCAAATGAATGTATCTAGCACTAAC 58.231 37.037 0.00 0.00 0.00 2.34
3293 3821 8.704668 TCCTCAAATGAATGTATCTAGCACTAA 58.295 33.333 0.00 0.00 0.00 2.24
3294 3822 8.250143 TCCTCAAATGAATGTATCTAGCACTA 57.750 34.615 0.00 0.00 0.00 2.74
3295 3823 7.129457 TCCTCAAATGAATGTATCTAGCACT 57.871 36.000 0.00 0.00 0.00 4.40
3296 3824 7.280876 TGTTCCTCAAATGAATGTATCTAGCAC 59.719 37.037 0.00 0.00 0.00 4.40
3297 3825 7.337938 TGTTCCTCAAATGAATGTATCTAGCA 58.662 34.615 0.00 0.00 0.00 3.49
3298 3826 7.792374 TGTTCCTCAAATGAATGTATCTAGC 57.208 36.000 0.00 0.00 0.00 3.42
3299 3827 8.616076 GGTTGTTCCTCAAATGAATGTATCTAG 58.384 37.037 0.00 0.00 37.81 2.43
3300 3828 8.328758 AGGTTGTTCCTCAAATGAATGTATCTA 58.671 33.333 0.00 0.00 44.42 1.98
3301 3829 7.177878 AGGTTGTTCCTCAAATGAATGTATCT 58.822 34.615 0.00 0.00 44.42 1.98
3302 3830 7.396540 AGGTTGTTCCTCAAATGAATGTATC 57.603 36.000 0.00 0.00 44.42 2.24
3317 3845 2.067365 ACTTGTCCCAAGGTTGTTCC 57.933 50.000 8.68 0.00 0.00 3.62
3318 3846 4.465632 AAAACTTGTCCCAAGGTTGTTC 57.534 40.909 7.94 0.00 0.00 3.18
3319 3847 4.901197 AAAAACTTGTCCCAAGGTTGTT 57.099 36.364 7.94 3.18 0.00 2.83
3337 3865 1.547372 CTACTCCCTCCGTCCGAAAAA 59.453 52.381 0.00 0.00 0.00 1.94
3338 3866 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3339 3867 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3340 3868 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
3341 3869 1.135094 ATACTACTCCCTCCGTCCGA 58.865 55.000 0.00 0.00 0.00 4.55
3342 3870 1.978454 AATACTACTCCCTCCGTCCG 58.022 55.000 0.00 0.00 0.00 4.79
3343 3871 5.859205 TTTAAATACTACTCCCTCCGTCC 57.141 43.478 0.00 0.00 0.00 4.79
3344 3872 8.202811 AGAATTTTAAATACTACTCCCTCCGTC 58.797 37.037 0.00 0.00 0.00 4.79
3345 3873 8.087303 AGAATTTTAAATACTACTCCCTCCGT 57.913 34.615 0.00 0.00 0.00 4.69
3346 3874 8.827677 CAAGAATTTTAAATACTACTCCCTCCG 58.172 37.037 0.00 0.00 0.00 4.63
3347 3875 9.682465 ACAAGAATTTTAAATACTACTCCCTCC 57.318 33.333 0.00 0.00 0.00 4.30
3367 3895 3.141398 GGCATCTGTGTCAGAACAAGAA 58.859 45.455 3.58 0.00 44.04 2.52
3437 3965 7.389607 TGAACTAAGAATAACAGCAAACCTACC 59.610 37.037 0.00 0.00 0.00 3.18
3663 4194 7.265673 TGTCTATTGGCAGTTTATGAGAGTAC 58.734 38.462 0.00 0.00 0.00 2.73
3731 4262 3.299340 AGCGAAACAGAGAACACGTAT 57.701 42.857 0.00 0.00 0.00 3.06
3784 4315 9.559732 CATGTATCAAATCTTTATAGGTGACCA 57.440 33.333 3.63 0.00 0.00 4.02
4154 4685 5.387113 AAATCCTATGCAGTTATGGACCA 57.613 39.130 0.00 0.00 0.00 4.02
4303 4834 3.222603 ACAACAAAGCCTTTAGTCCCAG 58.777 45.455 0.00 0.00 0.00 4.45
4305 4836 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
4400 4940 8.262227 TGGCGATAGTTATATATTACCAAAGGG 58.738 37.037 0.00 0.00 38.41 3.95
4440 4980 3.074504 TCGAAGGACGTATATGTGCAC 57.925 47.619 17.64 10.75 43.13 4.57
4932 5473 0.321671 TTGCTCTTCTCAGGTTCCGG 59.678 55.000 0.00 0.00 0.00 5.14
5393 5934 0.400213 TGCTCACGGGAAAATCTGGT 59.600 50.000 0.00 0.00 0.00 4.00
5474 6015 6.778821 TCTTGGTTTCCTTGAATGTCTATCA 58.221 36.000 0.00 0.00 0.00 2.15
5507 6048 1.565305 CACTTGGATCAGAGTAGCGC 58.435 55.000 0.00 0.00 0.00 5.92
5597 6138 2.412870 TGCCTATCACTTTCACGTGTG 58.587 47.619 16.51 6.49 36.33 3.82
5632 6173 2.044946 AGCAGCGTGATTTCCCCC 60.045 61.111 0.00 0.00 0.00 5.40
5636 6177 2.548875 AGATCAGAGCAGCGTGATTTC 58.451 47.619 13.00 4.61 33.43 2.17
5642 6183 1.470632 GCACTTAGATCAGAGCAGCGT 60.471 52.381 0.00 0.00 31.24 5.07
5737 6278 1.067565 TCTGTGGAGAGACGTGAATGC 60.068 52.381 0.00 0.00 0.00 3.56
5743 6284 4.527944 TGATATCTTCTGTGGAGAGACGT 58.472 43.478 3.98 0.00 0.00 4.34
5827 6368 3.630054 CCTGATGGACCCTAGTGACCTTA 60.630 52.174 0.00 0.00 34.57 2.69
5896 6451 9.500785 TCAAGTCACACAGTGAAATTATTATCA 57.499 29.630 7.81 0.00 44.49 2.15
6023 6578 3.433910 CGCAAGAATTCGTTCCCCACG 62.434 57.143 0.00 0.00 46.92 4.94
6047 6602 2.027377 AGGCATGTCTGAAGAACAGGAG 60.027 50.000 0.00 0.00 45.76 3.69
6070 6625 4.256920 CACATAGGCTATTCCAGTATGCC 58.743 47.826 3.76 0.00 43.52 4.40
6115 6670 4.612264 AAAGAACCTCCGCTTACAAGTA 57.388 40.909 0.00 0.00 0.00 2.24
6139 6694 2.867109 AGATTTGTGTCAGTGGAGGG 57.133 50.000 0.00 0.00 0.00 4.30
6198 6753 7.713942 TCTCTTAAACCCTAAGACTTGTTTCAC 59.286 37.037 5.64 0.00 33.36 3.18
6208 6763 5.497474 GGCAACATCTCTTAAACCCTAAGA 58.503 41.667 0.00 0.00 33.10 2.10
6228 6783 6.870971 AAACAGATTAAAGTAGAAACGGCA 57.129 33.333 0.00 0.00 0.00 5.69
6238 6793 7.039714 CCAAAGAAGGCCTAAACAGATTAAAGT 60.040 37.037 5.16 0.00 0.00 2.66
6239 6794 7.039714 ACCAAAGAAGGCCTAAACAGATTAAAG 60.040 37.037 5.16 0.00 0.00 1.85
6240 6795 6.780522 ACCAAAGAAGGCCTAAACAGATTAAA 59.219 34.615 5.16 0.00 0.00 1.52
6241 6796 6.311735 ACCAAAGAAGGCCTAAACAGATTAA 58.688 36.000 5.16 0.00 0.00 1.40
6242 6797 5.887754 ACCAAAGAAGGCCTAAACAGATTA 58.112 37.500 5.16 0.00 0.00 1.75
6243 6798 4.740902 ACCAAAGAAGGCCTAAACAGATT 58.259 39.130 5.16 0.00 0.00 2.40
6244 6799 4.388577 ACCAAAGAAGGCCTAAACAGAT 57.611 40.909 5.16 0.00 0.00 2.90
6245 6800 3.876309 ACCAAAGAAGGCCTAAACAGA 57.124 42.857 5.16 0.00 0.00 3.41
6246 6801 4.501400 CCAAACCAAAGAAGGCCTAAACAG 60.501 45.833 5.16 0.00 0.00 3.16
6247 6802 3.386402 CCAAACCAAAGAAGGCCTAAACA 59.614 43.478 5.16 0.00 0.00 2.83
6248 6803 3.639561 TCCAAACCAAAGAAGGCCTAAAC 59.360 43.478 5.16 0.17 0.00 2.01
6249 6804 3.895041 CTCCAAACCAAAGAAGGCCTAAA 59.105 43.478 5.16 0.00 0.00 1.85
6250 6805 3.496331 CTCCAAACCAAAGAAGGCCTAA 58.504 45.455 5.16 0.00 0.00 2.69
6251 6806 2.225017 CCTCCAAACCAAAGAAGGCCTA 60.225 50.000 5.16 0.00 0.00 3.93
6252 6807 1.481242 CCTCCAAACCAAAGAAGGCCT 60.481 52.381 0.00 0.00 0.00 5.19
6253 6808 0.969149 CCTCCAAACCAAAGAAGGCC 59.031 55.000 0.00 0.00 0.00 5.19
6254 6809 1.995376 TCCTCCAAACCAAAGAAGGC 58.005 50.000 0.00 0.00 0.00 4.35
6255 6810 5.551305 AAATTCCTCCAAACCAAAGAAGG 57.449 39.130 0.00 0.00 0.00 3.46
6256 6811 9.860898 CTATAAAATTCCTCCAAACCAAAGAAG 57.139 33.333 0.00 0.00 0.00 2.85
6257 6812 8.811994 CCTATAAAATTCCTCCAAACCAAAGAA 58.188 33.333 0.00 0.00 0.00 2.52
6258 6813 8.174085 TCCTATAAAATTCCTCCAAACCAAAGA 58.826 33.333 0.00 0.00 0.00 2.52
6259 6814 8.361169 TCCTATAAAATTCCTCCAAACCAAAG 57.639 34.615 0.00 0.00 0.00 2.77
6260 6815 8.728596 TTCCTATAAAATTCCTCCAAACCAAA 57.271 30.769 0.00 0.00 0.00 3.28
6261 6816 8.909423 ATTCCTATAAAATTCCTCCAAACCAA 57.091 30.769 0.00 0.00 0.00 3.67
6262 6817 8.909423 AATTCCTATAAAATTCCTCCAAACCA 57.091 30.769 0.00 0.00 0.00 3.67
6263 6818 9.201989 AGAATTCCTATAAAATTCCTCCAAACC 57.798 33.333 0.65 0.00 41.82 3.27
6314 6869 5.659079 TGAACCAAAGGGCTCTAAAGAAAAA 59.341 36.000 0.00 0.00 37.90 1.94
6315 6870 5.205056 TGAACCAAAGGGCTCTAAAGAAAA 58.795 37.500 0.00 0.00 37.90 2.29
6316 6871 4.798882 TGAACCAAAGGGCTCTAAAGAAA 58.201 39.130 0.00 0.00 37.90 2.52
6317 6872 4.447138 TGAACCAAAGGGCTCTAAAGAA 57.553 40.909 0.00 0.00 37.90 2.52
6318 6873 4.657814 ATGAACCAAAGGGCTCTAAAGA 57.342 40.909 0.00 0.00 37.90 2.52
6319 6874 4.884164 CCTATGAACCAAAGGGCTCTAAAG 59.116 45.833 0.00 0.00 37.90 1.85
6320 6875 4.538490 TCCTATGAACCAAAGGGCTCTAAA 59.462 41.667 0.00 0.00 37.90 1.85
6321 6876 4.108570 TCCTATGAACCAAAGGGCTCTAA 58.891 43.478 0.00 0.00 37.90 2.10
6322 6877 3.731431 TCCTATGAACCAAAGGGCTCTA 58.269 45.455 0.00 0.00 37.90 2.43
6323 6878 2.562296 TCCTATGAACCAAAGGGCTCT 58.438 47.619 0.00 0.00 37.90 4.09
6324 6879 3.366052 TTCCTATGAACCAAAGGGCTC 57.634 47.619 0.00 0.00 37.90 4.70
6325 6880 3.628257 CCATTCCTATGAACCAAAGGGCT 60.628 47.826 0.00 0.00 33.50 5.19
6326 6881 2.695147 CCATTCCTATGAACCAAAGGGC 59.305 50.000 0.00 0.00 33.50 5.19
6327 6882 4.249638 TCCATTCCTATGAACCAAAGGG 57.750 45.455 0.00 0.00 35.37 3.95
6328 6883 6.396829 GAATCCATTCCTATGAACCAAAGG 57.603 41.667 0.00 0.00 33.37 3.11
6391 6946 9.700831 AGTGTAGGCTCATTTTTATTTTCCTAT 57.299 29.630 0.00 0.00 0.00 2.57
6392 6947 9.174166 GAGTGTAGGCTCATTTTTATTTTCCTA 57.826 33.333 0.00 0.00 35.67 2.94
6393 6948 7.669722 TGAGTGTAGGCTCATTTTTATTTTCCT 59.330 33.333 0.00 0.00 40.23 3.36
6394 6949 7.826690 TGAGTGTAGGCTCATTTTTATTTTCC 58.173 34.615 0.00 0.00 40.23 3.13
6395 6950 9.860898 ATTGAGTGTAGGCTCATTTTTATTTTC 57.139 29.630 0.00 0.00 43.99 2.29
6396 6951 9.643693 CATTGAGTGTAGGCTCATTTTTATTTT 57.356 29.630 0.00 0.00 43.99 1.82
6397 6952 9.023962 TCATTGAGTGTAGGCTCATTTTTATTT 57.976 29.630 0.00 0.00 43.99 1.40
6398 6953 8.579850 TCATTGAGTGTAGGCTCATTTTTATT 57.420 30.769 0.00 0.00 43.99 1.40
6399 6954 8.579850 TTCATTGAGTGTAGGCTCATTTTTAT 57.420 30.769 0.00 0.00 43.99 1.40
6400 6955 7.994425 TTCATTGAGTGTAGGCTCATTTTTA 57.006 32.000 0.00 0.00 43.99 1.52
6401 6956 6.899393 TTCATTGAGTGTAGGCTCATTTTT 57.101 33.333 0.00 0.00 43.99 1.94
6402 6957 6.899393 TTTCATTGAGTGTAGGCTCATTTT 57.101 33.333 0.00 0.00 43.99 1.82
6403 6958 6.899393 TTTTCATTGAGTGTAGGCTCATTT 57.101 33.333 0.00 0.00 43.99 2.32
6404 6959 6.899393 TTTTTCATTGAGTGTAGGCTCATT 57.101 33.333 0.00 0.00 43.99 2.57
6424 6979 8.623030 CATTTGGTTGACATCAAAGGAATTTTT 58.377 29.630 9.43 0.00 36.97 1.94
6425 6980 7.992033 TCATTTGGTTGACATCAAAGGAATTTT 59.008 29.630 13.20 0.00 39.59 1.82
6426 6981 7.442062 GTCATTTGGTTGACATCAAAGGAATTT 59.558 33.333 15.68 0.00 42.54 1.82
6427 6982 6.930722 GTCATTTGGTTGACATCAAAGGAATT 59.069 34.615 15.68 0.00 42.54 2.17
6428 6983 6.458210 GTCATTTGGTTGACATCAAAGGAAT 58.542 36.000 15.68 0.00 42.54 3.01
6429 6984 5.841810 GTCATTTGGTTGACATCAAAGGAA 58.158 37.500 15.68 4.09 42.54 3.36
6430 6985 5.452078 GTCATTTGGTTGACATCAAAGGA 57.548 39.130 12.16 12.16 44.38 3.36
6439 6994 5.174943 GGAAACGAAATGTCATTTGGTTGAC 59.825 40.000 28.50 24.42 45.99 3.18
6440 6995 5.068460 AGGAAACGAAATGTCATTTGGTTGA 59.932 36.000 28.50 0.00 45.99 3.18
6441 6996 5.288804 AGGAAACGAAATGTCATTTGGTTG 58.711 37.500 28.50 13.89 45.99 3.77
6443 6998 6.834168 ATAGGAAACGAAATGTCATTTGGT 57.166 33.333 17.36 17.36 41.91 3.67
6444 6999 6.751888 GGAATAGGAAACGAAATGTCATTTGG 59.248 38.462 15.52 15.91 34.63 3.28
6445 7000 7.538575 AGGAATAGGAAACGAAATGTCATTTG 58.461 34.615 15.52 10.05 31.47 2.32
6446 7001 7.703058 AGGAATAGGAAACGAAATGTCATTT 57.297 32.000 10.63 10.63 34.64 2.32
6447 7002 8.047310 AGTAGGAATAGGAAACGAAATGTCATT 58.953 33.333 0.00 0.00 0.00 2.57
6448 7003 7.565680 AGTAGGAATAGGAAACGAAATGTCAT 58.434 34.615 0.00 0.00 0.00 3.06
6449 7004 6.942976 AGTAGGAATAGGAAACGAAATGTCA 58.057 36.000 0.00 0.00 0.00 3.58
6450 7005 7.039882 TGAGTAGGAATAGGAAACGAAATGTC 58.960 38.462 0.00 0.00 0.00 3.06
6451 7006 6.942976 TGAGTAGGAATAGGAAACGAAATGT 58.057 36.000 0.00 0.00 0.00 2.71
6452 7007 9.197694 CTATGAGTAGGAATAGGAAACGAAATG 57.802 37.037 0.00 0.00 0.00 2.32
6469 7024 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
6470 7025 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
6471 7026 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
6472 7027 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
6473 7028 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
6474 7029 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
6484 7039 8.363390 TGTAGGAAATGAGATGACATGTATCTC 58.637 37.037 24.04 24.04 46.82 2.75
6485 7040 8.255111 TGTAGGAAATGAGATGACATGTATCT 57.745 34.615 14.05 14.05 37.59 1.98
6486 7041 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
6487 7042 9.685276 TTTTGTAGGAAATGAGATGACATGTAT 57.315 29.630 0.00 0.00 0.00 2.29
6488 7043 9.685276 ATTTTGTAGGAAATGAGATGACATGTA 57.315 29.630 0.00 0.00 0.00 2.29
6489 7044 8.585471 ATTTTGTAGGAAATGAGATGACATGT 57.415 30.769 0.00 0.00 0.00 3.21
6490 7045 9.512435 GAATTTTGTAGGAAATGAGATGACATG 57.488 33.333 0.00 0.00 30.06 3.21
6491 7046 8.689972 GGAATTTTGTAGGAAATGAGATGACAT 58.310 33.333 0.00 0.00 30.06 3.06
6492 7047 7.890127 AGGAATTTTGTAGGAAATGAGATGACA 59.110 33.333 0.00 0.00 30.06 3.58
6493 7048 8.286191 AGGAATTTTGTAGGAAATGAGATGAC 57.714 34.615 0.00 0.00 30.06 3.06
6502 7057 9.947433 TCGTAGAAATAGGAATTTTGTAGGAAA 57.053 29.630 0.00 0.00 35.41 3.13
6514 7069 9.992442 AGGATAGGATTATCGTAGAAATAGGAA 57.008 33.333 1.23 0.00 43.58 3.36
6530 7085 7.887495 GCCTCTTTTGATTCATAGGATAGGATT 59.113 37.037 8.33 0.00 28.27 3.01
6531 7086 7.401246 GCCTCTTTTGATTCATAGGATAGGAT 58.599 38.462 8.33 0.00 28.27 3.24
6532 7087 6.240002 GGCCTCTTTTGATTCATAGGATAGGA 60.240 42.308 0.00 0.00 0.00 2.94
6533 7088 5.942826 GGCCTCTTTTGATTCATAGGATAGG 59.057 44.000 0.00 0.00 0.00 2.57
6534 7089 6.777782 AGGCCTCTTTTGATTCATAGGATAG 58.222 40.000 0.00 0.00 0.00 2.08
6535 7090 6.770286 AGGCCTCTTTTGATTCATAGGATA 57.230 37.500 0.00 0.00 0.00 2.59
6536 7091 5.659849 AGGCCTCTTTTGATTCATAGGAT 57.340 39.130 0.00 0.00 0.00 3.24
6537 7092 6.158695 AGTTAGGCCTCTTTTGATTCATAGGA 59.841 38.462 9.68 0.46 0.00 2.94
6538 7093 6.360618 AGTTAGGCCTCTTTTGATTCATAGG 58.639 40.000 9.68 0.00 0.00 2.57
6539 7094 7.872113 AAGTTAGGCCTCTTTTGATTCATAG 57.128 36.000 9.68 0.00 0.00 2.23
6540 7095 8.650143 AAAAGTTAGGCCTCTTTTGATTCATA 57.350 30.769 24.24 0.00 40.73 2.15
6541 7096 7.544804 AAAAGTTAGGCCTCTTTTGATTCAT 57.455 32.000 24.24 5.59 40.73 2.57
6542 7097 6.976934 AAAAGTTAGGCCTCTTTTGATTCA 57.023 33.333 24.24 0.00 40.73 2.57
6563 7118 9.431887 GTTATACATACAGAGACAGACCAAAAA 57.568 33.333 0.00 0.00 0.00 1.94
6564 7119 8.038944 GGTTATACATACAGAGACAGACCAAAA 58.961 37.037 0.00 0.00 0.00 2.44
6565 7120 7.179516 TGGTTATACATACAGAGACAGACCAAA 59.820 37.037 0.00 0.00 30.10 3.28
6566 7121 6.666113 TGGTTATACATACAGAGACAGACCAA 59.334 38.462 0.00 0.00 30.10 3.67
6567 7122 6.192044 TGGTTATACATACAGAGACAGACCA 58.808 40.000 0.00 0.00 0.00 4.02
6568 7123 6.710597 TGGTTATACATACAGAGACAGACC 57.289 41.667 0.00 0.00 0.00 3.85
6569 7124 6.697892 GCTTGGTTATACATACAGAGACAGAC 59.302 42.308 0.00 0.00 0.00 3.51
6570 7125 6.379988 TGCTTGGTTATACATACAGAGACAGA 59.620 38.462 0.00 0.00 0.00 3.41
6571 7126 6.573434 TGCTTGGTTATACATACAGAGACAG 58.427 40.000 0.00 0.00 0.00 3.51
6572 7127 6.538945 TGCTTGGTTATACATACAGAGACA 57.461 37.500 0.00 0.00 0.00 3.41
6573 7128 7.843490 TTTGCTTGGTTATACATACAGAGAC 57.157 36.000 0.00 0.00 0.00 3.36
6574 7129 9.764363 CTATTTGCTTGGTTATACATACAGAGA 57.236 33.333 0.00 0.00 0.00 3.10
6575 7130 8.993121 CCTATTTGCTTGGTTATACATACAGAG 58.007 37.037 0.00 0.00 0.00 3.35
6576 7131 7.936847 CCCTATTTGCTTGGTTATACATACAGA 59.063 37.037 0.00 0.00 0.00 3.41
6577 7132 7.936847 TCCCTATTTGCTTGGTTATACATACAG 59.063 37.037 0.00 0.00 0.00 2.74
6578 7133 7.807198 TCCCTATTTGCTTGGTTATACATACA 58.193 34.615 0.00 0.00 0.00 2.29
6579 7134 8.730680 CATCCCTATTTGCTTGGTTATACATAC 58.269 37.037 0.00 0.00 0.00 2.39
6580 7135 7.888021 CCATCCCTATTTGCTTGGTTATACATA 59.112 37.037 0.00 0.00 0.00 2.29
6581 7136 6.721208 CCATCCCTATTTGCTTGGTTATACAT 59.279 38.462 0.00 0.00 0.00 2.29
6582 7137 6.068010 CCATCCCTATTTGCTTGGTTATACA 58.932 40.000 0.00 0.00 0.00 2.29
6583 7138 6.303839 TCCATCCCTATTTGCTTGGTTATAC 58.696 40.000 0.00 0.00 0.00 1.47
6584 7139 6.523035 TCCATCCCTATTTGCTTGGTTATA 57.477 37.500 0.00 0.00 0.00 0.98
6585 7140 5.402054 TCCATCCCTATTTGCTTGGTTAT 57.598 39.130 0.00 0.00 0.00 1.89
6586 7141 4.871871 TCCATCCCTATTTGCTTGGTTA 57.128 40.909 0.00 0.00 0.00 2.85
6587 7142 3.756082 TCCATCCCTATTTGCTTGGTT 57.244 42.857 0.00 0.00 0.00 3.67
6588 7143 3.756082 TTCCATCCCTATTTGCTTGGT 57.244 42.857 0.00 0.00 0.00 3.67
6589 7144 4.650588 TGAATTCCATCCCTATTTGCTTGG 59.349 41.667 2.27 0.00 0.00 3.61
6590 7145 5.857471 TGAATTCCATCCCTATTTGCTTG 57.143 39.130 2.27 0.00 0.00 4.01
6591 7146 5.163374 GCTTGAATTCCATCCCTATTTGCTT 60.163 40.000 2.27 0.00 0.00 3.91
6592 7147 4.343239 GCTTGAATTCCATCCCTATTTGCT 59.657 41.667 2.27 0.00 0.00 3.91
6593 7148 4.502087 GGCTTGAATTCCATCCCTATTTGC 60.502 45.833 2.27 0.00 0.00 3.68
6594 7149 4.261741 CGGCTTGAATTCCATCCCTATTTG 60.262 45.833 2.27 0.00 0.00 2.32
6595 7150 3.891366 CGGCTTGAATTCCATCCCTATTT 59.109 43.478 2.27 0.00 0.00 1.40
6596 7151 3.138283 TCGGCTTGAATTCCATCCCTATT 59.862 43.478 2.27 0.00 0.00 1.73
6597 7152 2.711009 TCGGCTTGAATTCCATCCCTAT 59.289 45.455 2.27 0.00 0.00 2.57
6598 7153 2.104792 CTCGGCTTGAATTCCATCCCTA 59.895 50.000 2.27 0.00 0.00 3.53
6599 7154 0.918983 TCGGCTTGAATTCCATCCCT 59.081 50.000 2.27 0.00 0.00 4.20
6600 7155 1.312815 CTCGGCTTGAATTCCATCCC 58.687 55.000 2.27 0.00 0.00 3.85
6601 7156 1.943340 GACTCGGCTTGAATTCCATCC 59.057 52.381 2.27 0.00 0.00 3.51
6602 7157 1.594862 CGACTCGGCTTGAATTCCATC 59.405 52.381 2.27 0.00 0.00 3.51
6603 7158 1.656652 CGACTCGGCTTGAATTCCAT 58.343 50.000 2.27 0.00 0.00 3.41
6604 7159 0.391130 CCGACTCGGCTTGAATTCCA 60.391 55.000 4.10 0.00 41.17 3.53
6605 7160 1.090052 CCCGACTCGGCTTGAATTCC 61.090 60.000 12.37 0.00 46.86 3.01
6606 7161 1.706287 GCCCGACTCGGCTTGAATTC 61.706 60.000 12.37 0.00 46.86 2.17
6607 7162 1.745489 GCCCGACTCGGCTTGAATT 60.745 57.895 12.37 0.00 46.86 2.17
6608 7163 2.125106 GCCCGACTCGGCTTGAAT 60.125 61.111 12.37 0.00 46.86 2.57
6625 7180 4.544689 CGAGTCGAGCCGAGCTGG 62.545 72.222 6.73 2.61 39.88 4.85
6628 7183 2.594119 TTTAGCGAGTCGAGCCGAGC 62.594 60.000 18.61 0.00 36.23 5.03
6629 7184 0.590230 CTTTAGCGAGTCGAGCCGAG 60.590 60.000 18.61 2.92 36.23 4.63
6630 7185 1.428219 CTTTAGCGAGTCGAGCCGA 59.572 57.895 18.61 0.00 34.64 5.54
6631 7186 2.224885 GCTTTAGCGAGTCGAGCCG 61.225 63.158 18.61 0.77 34.64 5.52
6632 7187 3.694527 GCTTTAGCGAGTCGAGCC 58.305 61.111 18.61 0.00 34.64 4.70
6639 7194 7.981914 CTCGTTAATGAAATGAGCTTTAGCGAG 60.982 40.741 17.77 17.77 42.73 5.03
6640 7195 6.237835 CTCGTTAATGAAATGAGCTTTAGCGA 60.238 38.462 9.59 9.59 42.73 4.93
6641 7196 5.898606 CTCGTTAATGAAATGAGCTTTAGCG 59.101 40.000 0.00 0.00 42.73 4.26
6650 7205 6.036083 GTCAAGCTAGCTCGTTAATGAAATGA 59.964 38.462 19.65 10.39 0.00 2.57
6651 7206 6.036517 AGTCAAGCTAGCTCGTTAATGAAATG 59.963 38.462 19.65 8.00 0.00 2.32
6652 7207 6.109359 AGTCAAGCTAGCTCGTTAATGAAAT 58.891 36.000 19.65 6.38 0.00 2.17
6653 7208 5.479306 AGTCAAGCTAGCTCGTTAATGAAA 58.521 37.500 19.65 0.00 0.00 2.69
6654 7209 5.073311 AGTCAAGCTAGCTCGTTAATGAA 57.927 39.130 19.65 0.00 0.00 2.57
6655 7210 4.673441 GAGTCAAGCTAGCTCGTTAATGA 58.327 43.478 19.65 14.01 0.00 2.57
6656 7211 3.483922 CGAGTCAAGCTAGCTCGTTAATG 59.516 47.826 19.65 11.67 44.69 1.90
6657 7212 3.696898 CGAGTCAAGCTAGCTCGTTAAT 58.303 45.455 19.65 2.89 44.69 1.40
6658 7213 3.132629 CGAGTCAAGCTAGCTCGTTAA 57.867 47.619 19.65 0.00 44.69 2.01
6659 7214 2.826979 CGAGTCAAGCTAGCTCGTTA 57.173 50.000 19.65 0.63 44.69 3.18
6660 7215 3.704381 CGAGTCAAGCTAGCTCGTT 57.296 52.632 19.65 0.00 44.69 3.85
6663 7218 1.267832 CGAGTCGAGTCAAGCTAGCTC 60.268 57.143 19.65 5.67 0.00 4.09
6664 7219 0.730265 CGAGTCGAGTCAAGCTAGCT 59.270 55.000 19.87 12.68 0.00 3.32
6665 7220 0.448593 ACGAGTCGAGTCAAGCTAGC 59.551 55.000 21.50 6.62 0.00 3.42
6666 7221 2.510874 CAACGAGTCGAGTCAAGCTAG 58.489 52.381 21.50 5.18 0.00 3.42
6667 7222 1.401148 GCAACGAGTCGAGTCAAGCTA 60.401 52.381 21.50 0.00 0.00 3.32
6668 7223 0.664767 GCAACGAGTCGAGTCAAGCT 60.665 55.000 21.50 0.00 0.00 3.74
6669 7224 0.664767 AGCAACGAGTCGAGTCAAGC 60.665 55.000 21.50 17.93 0.00 4.01
6670 7225 2.613730 TAGCAACGAGTCGAGTCAAG 57.386 50.000 21.50 9.65 0.00 3.02
6671 7226 4.690184 TTATAGCAACGAGTCGAGTCAA 57.310 40.909 21.50 1.70 0.00 3.18
6672 7227 4.334481 TCATTATAGCAACGAGTCGAGTCA 59.666 41.667 21.50 0.00 0.00 3.41
6673 7228 4.845387 TCATTATAGCAACGAGTCGAGTC 58.155 43.478 21.50 10.37 0.00 3.36
6674 7229 4.335874 ACTCATTATAGCAACGAGTCGAGT 59.664 41.667 21.50 4.35 31.39 4.18
6675 7230 4.849883 ACTCATTATAGCAACGAGTCGAG 58.150 43.478 21.50 12.29 31.39 4.04
6676 7231 4.895224 ACTCATTATAGCAACGAGTCGA 57.105 40.909 21.50 0.00 31.39 4.20
6677 7232 5.034797 TGAACTCATTATAGCAACGAGTCG 58.965 41.667 11.85 11.85 35.95 4.18
6678 7233 6.887376 TTGAACTCATTATAGCAACGAGTC 57.113 37.500 0.00 0.00 35.95 3.36
6679 7234 7.011482 GGATTTGAACTCATTATAGCAACGAGT 59.989 37.037 0.00 0.00 38.55 4.18
6680 7235 7.011389 TGGATTTGAACTCATTATAGCAACGAG 59.989 37.037 0.00 0.00 0.00 4.18
6681 7236 6.821160 TGGATTTGAACTCATTATAGCAACGA 59.179 34.615 0.00 0.00 0.00 3.85
6682 7237 7.015226 TGGATTTGAACTCATTATAGCAACG 57.985 36.000 0.00 0.00 0.00 4.10
6683 7238 8.623903 TCATGGATTTGAACTCATTATAGCAAC 58.376 33.333 0.00 0.00 0.00 4.17
6684 7239 8.750515 TCATGGATTTGAACTCATTATAGCAA 57.249 30.769 0.00 0.00 0.00 3.91
6685 7240 8.929260 ATCATGGATTTGAACTCATTATAGCA 57.071 30.769 0.00 0.00 0.00 3.49
6686 7241 9.622004 CAATCATGGATTTGAACTCATTATAGC 57.378 33.333 0.00 0.00 28.87 2.97
6689 7244 7.289317 AGCCAATCATGGATTTGAACTCATTAT 59.711 33.333 0.00 0.00 44.90 1.28
6690 7245 6.608405 AGCCAATCATGGATTTGAACTCATTA 59.392 34.615 0.00 0.00 44.90 1.90
6691 7246 5.424252 AGCCAATCATGGATTTGAACTCATT 59.576 36.000 0.00 0.00 44.90 2.57
6692 7247 4.960469 AGCCAATCATGGATTTGAACTCAT 59.040 37.500 0.00 0.00 44.90 2.90
6693 7248 4.346730 AGCCAATCATGGATTTGAACTCA 58.653 39.130 0.00 0.00 44.90 3.41
6694 7249 4.996788 AGCCAATCATGGATTTGAACTC 57.003 40.909 0.00 0.00 44.90 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.