Multiple sequence alignment - TraesCS7A01G406400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G406400 chr7A 100.000 2841 0 0 1 2841 591647879 591650719 0.000000e+00 5247.0
1 TraesCS7A01G406400 chr7A 92.188 384 24 4 1 382 224984439 224984818 3.220000e-149 538.0
2 TraesCS7A01G406400 chr7A 90.617 405 33 3 989 1392 59017648 59018048 1.500000e-147 532.0
3 TraesCS7A01G406400 chr7A 95.152 165 8 0 2677 2841 591711869 591712033 7.810000e-66 261.0
4 TraesCS7A01G406400 chr7A 82.171 258 27 12 1683 1928 59018291 59018541 1.330000e-48 204.0
5 TraesCS7A01G406400 chr7A 90.722 97 9 0 1465 1561 59018099 59018195 2.300000e-26 130.0
6 TraesCS7A01G406400 chr7B 89.559 1906 113 36 659 2541 549602801 549604643 0.000000e+00 2338.0
7 TraesCS7A01G406400 chr7B 90.649 385 26 7 1 384 184291551 184291176 1.170000e-138 503.0
8 TraesCS7A01G406400 chr7B 89.796 245 24 1 2595 2839 549614114 549614357 2.120000e-81 313.0
9 TraesCS7A01G406400 chr7B 83.986 281 17 11 387 665 549602517 549602771 7.860000e-61 244.0
10 TraesCS7A01G406400 chr7D 94.274 1502 64 13 659 2149 517114460 517115950 0.000000e+00 2278.0
11 TraesCS7A01G406400 chr7D 78.892 1047 125 45 989 2020 55221731 55222696 3.110000e-174 621.0
12 TraesCS7A01G406400 chr7D 78.470 1059 129 49 989 2020 54990463 54989477 4.050000e-168 601.0
13 TraesCS7A01G406400 chr7D 80.640 656 61 26 2197 2817 517115953 517116577 5.580000e-122 448.0
14 TraesCS7A01G406400 chr7D 89.619 289 18 8 385 664 517114127 517114412 9.680000e-95 357.0
15 TraesCS7A01G406400 chr7D 96.875 32 0 1 596 626 517114311 517114342 5.000000e-03 52.8
16 TraesCS7A01G406400 chr3D 92.208 385 20 8 1 384 544591107 544590732 1.160000e-148 536.0
17 TraesCS7A01G406400 chr3D 90.339 383 27 7 1 382 544585698 544585325 7.070000e-136 494.0
18 TraesCS7A01G406400 chr6D 92.167 383 20 4 1 382 29108444 29108817 1.500000e-147 532.0
19 TraesCS7A01G406400 chr6D 89.737 380 32 4 1 379 151763347 151763720 1.980000e-131 479.0
20 TraesCS7A01G406400 chr5D 91.927 384 21 7 1 383 502743671 502743297 1.940000e-146 529.0
21 TraesCS7A01G406400 chr2D 92.000 350 18 7 36 384 79904692 79904352 1.530000e-132 483.0
22 TraesCS7A01G406400 chr2A 89.920 377 28 8 9 384 459940675 459940308 7.120000e-131 477.0
23 TraesCS7A01G406400 chr4A 81.010 574 62 16 989 1561 671018384 671018911 2.040000e-111 412.0
24 TraesCS7A01G406400 chr4A 82.031 256 33 8 1683 1928 671027030 671027282 3.710000e-49 206.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G406400 chr7A 591647879 591650719 2840 False 5247.000000 5247 100.000000 1 2841 1 chr7A.!!$F2 2840
1 TraesCS7A01G406400 chr7A 59017648 59018541 893 False 288.666667 532 87.836667 989 1928 3 chr7A.!!$F4 939
2 TraesCS7A01G406400 chr7B 549602517 549604643 2126 False 1291.000000 2338 86.772500 387 2541 2 chr7B.!!$F2 2154
3 TraesCS7A01G406400 chr7D 517114127 517116577 2450 False 783.950000 2278 90.352000 385 2817 4 chr7D.!!$F2 2432
4 TraesCS7A01G406400 chr7D 55221731 55222696 965 False 621.000000 621 78.892000 989 2020 1 chr7D.!!$F1 1031
5 TraesCS7A01G406400 chr7D 54989477 54990463 986 True 601.000000 601 78.470000 989 2020 1 chr7D.!!$R1 1031
6 TraesCS7A01G406400 chr4A 671018384 671018911 527 False 412.000000 412 81.010000 989 1561 1 chr4A.!!$F1 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
146 147 0.031314 CCTCATCCTCGACGACATGG 59.969 60.0 10.68 4.18 0.0 3.66 F
147 148 0.031314 CTCATCCTCGACGACATGGG 59.969 60.0 10.68 5.23 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1133 1240 1.069978 GGAAGTAGAGGATGAGCAGGC 59.930 57.143 0.00 0.00 0.00 4.85 R
2003 2160 1.133853 GCCAGGATGCATCTTCTTCCT 60.134 52.381 25.28 12.47 40.14 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.787001 CCTCTGGAACCCCGCCTC 61.787 72.222 0.00 0.00 34.29 4.70
19 20 2.685380 CTCTGGAACCCCGCCTCT 60.685 66.667 0.00 0.00 34.29 3.69
20 21 2.683933 TCTGGAACCCCGCCTCTC 60.684 66.667 0.00 0.00 34.29 3.20
21 22 4.148825 CTGGAACCCCGCCTCTCG 62.149 72.222 0.00 0.00 38.08 4.04
23 24 4.452733 GGAACCCCGCCTCTCGTG 62.453 72.222 0.00 0.00 36.19 4.35
24 25 3.379445 GAACCCCGCCTCTCGTGA 61.379 66.667 0.00 0.00 36.19 4.35
25 26 2.683933 AACCCCGCCTCTCGTGAT 60.684 61.111 0.00 0.00 36.19 3.06
26 27 2.630592 GAACCCCGCCTCTCGTGATC 62.631 65.000 0.00 0.00 36.19 2.92
27 28 3.917760 CCCCGCCTCTCGTGATCC 61.918 72.222 0.00 0.00 36.19 3.36
28 29 2.835431 CCCGCCTCTCGTGATCCT 60.835 66.667 0.00 0.00 36.19 3.24
29 30 1.528542 CCCGCCTCTCGTGATCCTA 60.529 63.158 0.00 0.00 36.19 2.94
30 31 0.896019 CCCGCCTCTCGTGATCCTAT 60.896 60.000 0.00 0.00 36.19 2.57
31 32 1.613520 CCCGCCTCTCGTGATCCTATA 60.614 57.143 0.00 0.00 36.19 1.31
32 33 1.469308 CCGCCTCTCGTGATCCTATAC 59.531 57.143 0.00 0.00 36.19 1.47
33 34 1.128878 CGCCTCTCGTGATCCTATACG 59.871 57.143 0.00 0.00 41.38 3.06
34 35 2.424557 GCCTCTCGTGATCCTATACGA 58.575 52.381 5.95 5.95 45.87 3.43
40 41 3.927854 TCGTGATCCTATACGAGAGAGG 58.072 50.000 2.18 0.00 43.54 3.69
41 42 3.004171 CGTGATCCTATACGAGAGAGGG 58.996 54.545 0.00 0.00 42.54 4.30
42 43 3.349022 GTGATCCTATACGAGAGAGGGG 58.651 54.545 0.00 0.00 0.00 4.79
43 44 2.291024 TGATCCTATACGAGAGAGGGGC 60.291 54.545 0.00 0.00 0.00 5.80
44 45 0.036448 TCCTATACGAGAGAGGGGCG 59.964 60.000 0.00 0.00 0.00 6.13
45 46 0.036448 CCTATACGAGAGAGGGGCGA 59.964 60.000 0.00 0.00 0.00 5.54
46 47 1.340211 CCTATACGAGAGAGGGGCGAT 60.340 57.143 0.00 0.00 0.00 4.58
47 48 2.011222 CTATACGAGAGAGGGGCGATC 58.989 57.143 0.00 0.00 0.00 3.69
48 49 0.110678 ATACGAGAGAGGGGCGATCA 59.889 55.000 0.00 0.00 0.00 2.92
49 50 0.535328 TACGAGAGAGGGGCGATCAG 60.535 60.000 0.00 0.00 0.00 2.90
50 51 2.560119 CGAGAGAGGGGCGATCAGG 61.560 68.421 0.00 0.00 0.00 3.86
51 52 1.456705 GAGAGAGGGGCGATCAGGT 60.457 63.158 0.00 0.00 0.00 4.00
52 53 1.002274 AGAGAGGGGCGATCAGGTT 59.998 57.895 0.00 0.00 0.00 3.50
53 54 0.618968 AGAGAGGGGCGATCAGGTTT 60.619 55.000 0.00 0.00 0.00 3.27
54 55 0.253327 GAGAGGGGCGATCAGGTTTT 59.747 55.000 0.00 0.00 0.00 2.43
55 56 0.698818 AGAGGGGCGATCAGGTTTTT 59.301 50.000 0.00 0.00 0.00 1.94
56 57 0.811281 GAGGGGCGATCAGGTTTTTG 59.189 55.000 0.00 0.00 0.00 2.44
57 58 0.611896 AGGGGCGATCAGGTTTTTGG 60.612 55.000 0.00 0.00 0.00 3.28
58 59 1.604147 GGGGCGATCAGGTTTTTGGG 61.604 60.000 0.00 0.00 0.00 4.12
59 60 1.604147 GGGCGATCAGGTTTTTGGGG 61.604 60.000 0.00 0.00 0.00 4.96
60 61 0.610785 GGCGATCAGGTTTTTGGGGA 60.611 55.000 0.00 0.00 0.00 4.81
61 62 0.811281 GCGATCAGGTTTTTGGGGAG 59.189 55.000 0.00 0.00 0.00 4.30
62 63 0.811281 CGATCAGGTTTTTGGGGAGC 59.189 55.000 0.00 0.00 0.00 4.70
63 64 0.811281 GATCAGGTTTTTGGGGAGCG 59.189 55.000 0.00 0.00 0.00 5.03
64 65 1.250840 ATCAGGTTTTTGGGGAGCGC 61.251 55.000 0.00 0.00 0.00 5.92
65 66 2.197324 AGGTTTTTGGGGAGCGCA 59.803 55.556 11.47 0.00 0.00 6.09
66 67 2.200337 AGGTTTTTGGGGAGCGCAC 61.200 57.895 11.47 1.97 0.00 5.34
67 68 2.200337 GGTTTTTGGGGAGCGCACT 61.200 57.895 11.47 0.00 0.00 4.40
68 69 1.285950 GTTTTTGGGGAGCGCACTC 59.714 57.895 11.47 1.84 42.66 3.51
69 70 2.258013 TTTTTGGGGAGCGCACTCG 61.258 57.895 11.47 0.00 44.48 4.18
70 71 2.951475 TTTTTGGGGAGCGCACTCGT 62.951 55.000 11.47 0.00 44.48 4.18
71 72 4.680237 TTGGGGAGCGCACTCGTG 62.680 66.667 11.47 0.00 44.48 4.35
81 82 4.063709 CACTCGTGCGACTGCTAG 57.936 61.111 0.00 0.00 43.34 3.42
82 83 1.210413 CACTCGTGCGACTGCTAGT 59.790 57.895 0.00 0.00 43.34 2.57
83 84 0.446616 CACTCGTGCGACTGCTAGTA 59.553 55.000 0.00 0.00 43.34 1.82
84 85 0.727970 ACTCGTGCGACTGCTAGTAG 59.272 55.000 6.26 6.26 43.34 2.57
85 86 0.590230 CTCGTGCGACTGCTAGTAGC 60.590 60.000 15.56 15.56 45.33 3.58
88 89 4.288645 GCGACTGCTAGTAGCGAC 57.711 61.111 21.73 10.93 46.26 5.19
89 90 1.651730 GCGACTGCTAGTAGCGACG 60.652 63.158 22.87 22.87 46.26 5.12
90 91 2.004445 CGACTGCTAGTAGCGACGA 58.996 57.895 22.82 6.43 46.26 4.20
91 92 0.315220 CGACTGCTAGTAGCGACGAC 60.315 60.000 22.82 12.58 46.26 4.34
92 93 1.008329 GACTGCTAGTAGCGACGACT 58.992 55.000 17.16 0.00 46.26 4.18
93 94 1.397692 GACTGCTAGTAGCGACGACTT 59.602 52.381 17.16 0.00 46.26 3.01
94 95 1.397692 ACTGCTAGTAGCGACGACTTC 59.602 52.381 17.16 0.00 46.26 3.01
110 111 3.036577 TCGCCAACGACGACTTCT 58.963 55.556 0.00 0.00 45.12 2.85
111 112 1.361271 TCGCCAACGACGACTTCTT 59.639 52.632 0.00 0.00 45.12 2.52
112 113 0.662374 TCGCCAACGACGACTTCTTC 60.662 55.000 0.00 0.00 45.12 2.87
113 114 1.615107 CGCCAACGACGACTTCTTCC 61.615 60.000 0.00 0.00 43.93 3.46
114 115 1.289800 GCCAACGACGACTTCTTCCC 61.290 60.000 0.00 0.00 0.00 3.97
115 116 0.669625 CCAACGACGACTTCTTCCCC 60.670 60.000 0.00 0.00 0.00 4.81
116 117 1.007336 CAACGACGACTTCTTCCCCG 61.007 60.000 0.00 0.00 0.00 5.73
117 118 1.174712 AACGACGACTTCTTCCCCGA 61.175 55.000 0.00 0.00 0.00 5.14
118 119 1.154073 CGACGACTTCTTCCCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
119 120 1.214853 GACGACTTCTTCCCCGACC 59.785 63.158 0.00 0.00 0.00 4.79
120 121 1.228800 ACGACTTCTTCCCCGACCT 60.229 57.895 0.00 0.00 0.00 3.85
121 122 1.249469 ACGACTTCTTCCCCGACCTC 61.249 60.000 0.00 0.00 0.00 3.85
122 123 1.511768 GACTTCTTCCCCGACCTCG 59.488 63.158 0.00 0.00 39.44 4.63
132 133 2.579201 CGACCTCGGCAACCTCAT 59.421 61.111 0.00 0.00 35.37 2.90
133 134 1.519455 CGACCTCGGCAACCTCATC 60.519 63.158 0.00 0.00 35.37 2.92
134 135 1.153349 GACCTCGGCAACCTCATCC 60.153 63.158 0.00 0.00 0.00 3.51
135 136 1.613630 ACCTCGGCAACCTCATCCT 60.614 57.895 0.00 0.00 0.00 3.24
136 137 1.144936 CCTCGGCAACCTCATCCTC 59.855 63.158 0.00 0.00 0.00 3.71
137 138 1.227089 CTCGGCAACCTCATCCTCG 60.227 63.158 0.00 0.00 0.00 4.63
138 139 1.667154 CTCGGCAACCTCATCCTCGA 61.667 60.000 0.00 0.00 0.00 4.04
139 140 1.519455 CGGCAACCTCATCCTCGAC 60.519 63.158 0.00 0.00 0.00 4.20
140 141 1.519455 GGCAACCTCATCCTCGACG 60.519 63.158 0.00 0.00 0.00 5.12
141 142 1.511305 GCAACCTCATCCTCGACGA 59.489 57.895 0.00 0.00 0.00 4.20
142 143 0.802607 GCAACCTCATCCTCGACGAC 60.803 60.000 0.00 0.00 0.00 4.34
143 144 0.526211 CAACCTCATCCTCGACGACA 59.474 55.000 0.00 0.00 0.00 4.35
144 145 1.135139 CAACCTCATCCTCGACGACAT 59.865 52.381 0.00 0.00 0.00 3.06
145 146 0.741326 ACCTCATCCTCGACGACATG 59.259 55.000 0.00 0.00 0.00 3.21
146 147 0.031314 CCTCATCCTCGACGACATGG 59.969 60.000 10.68 4.18 0.00 3.66
147 148 0.031314 CTCATCCTCGACGACATGGG 59.969 60.000 10.68 5.23 0.00 4.00
148 149 1.592669 CATCCTCGACGACATGGGC 60.593 63.158 0.00 0.00 0.00 5.36
149 150 3.138930 ATCCTCGACGACATGGGCG 62.139 63.158 8.44 8.44 0.00 6.13
150 151 3.822192 CCTCGACGACATGGGCGA 61.822 66.667 15.69 8.33 0.00 5.54
151 152 2.579787 CTCGACGACATGGGCGAC 60.580 66.667 15.69 9.34 0.00 5.19
152 153 3.336715 CTCGACGACATGGGCGACA 62.337 63.158 15.69 0.00 0.00 4.35
153 154 2.431771 CGACGACATGGGCGACAA 60.432 61.111 15.69 0.00 0.00 3.18
154 155 2.726691 CGACGACATGGGCGACAAC 61.727 63.158 15.69 4.97 0.00 3.32
155 156 2.726691 GACGACATGGGCGACAACG 61.727 63.158 15.69 0.00 42.93 4.10
156 157 2.736995 CGACATGGGCGACAACGT 60.737 61.111 4.45 0.00 41.98 3.99
157 158 2.726691 CGACATGGGCGACAACGTC 61.727 63.158 4.45 0.00 43.86 4.34
158 159 1.666553 GACATGGGCGACAACGTCA 60.667 57.895 0.00 0.00 46.58 4.35
159 160 1.225376 GACATGGGCGACAACGTCAA 61.225 55.000 0.00 0.00 46.58 3.18
160 161 0.605319 ACATGGGCGACAACGTCAAT 60.605 50.000 0.00 0.00 46.58 2.57
161 162 0.179192 CATGGGCGACAACGTCAATG 60.179 55.000 0.00 0.00 46.53 2.82
162 163 1.922135 ATGGGCGACAACGTCAATGC 61.922 55.000 0.00 0.00 46.58 3.56
163 164 2.175811 GGCGACAACGTCAATGCC 59.824 61.111 6.15 6.15 44.03 4.40
164 165 2.202171 GCGACAACGTCAATGCCG 60.202 61.111 0.00 0.00 41.98 5.69
165 166 2.474266 CGACAACGTCAATGCCGG 59.526 61.111 0.00 0.00 32.09 6.13
166 167 2.175811 GACAACGTCAATGCCGGC 59.824 61.111 22.73 22.73 32.09 6.13
167 168 3.645157 GACAACGTCAATGCCGGCG 62.645 63.158 23.90 7.87 32.09 6.46
168 169 4.459331 CAACGTCAATGCCGGCGG 62.459 66.667 24.35 24.35 0.00 6.13
197 198 4.694233 CTGCTCCTGCTGCACCGT 62.694 66.667 0.00 0.00 40.48 4.83
198 199 3.300934 CTGCTCCTGCTGCACCGTA 62.301 63.158 0.00 0.00 40.48 4.02
199 200 2.187946 GCTCCTGCTGCACCGTAT 59.812 61.111 0.00 0.00 36.03 3.06
200 201 2.176273 GCTCCTGCTGCACCGTATG 61.176 63.158 0.00 0.00 36.03 2.39
201 202 1.219124 CTCCTGCTGCACCGTATGT 59.781 57.895 0.00 0.00 0.00 2.29
215 216 5.470047 ACCGTATGTGATTCTATCCTTCC 57.530 43.478 0.00 0.00 0.00 3.46
216 217 5.148502 ACCGTATGTGATTCTATCCTTCCT 58.851 41.667 0.00 0.00 0.00 3.36
217 218 5.011125 ACCGTATGTGATTCTATCCTTCCTG 59.989 44.000 0.00 0.00 0.00 3.86
218 219 5.011125 CCGTATGTGATTCTATCCTTCCTGT 59.989 44.000 0.00 0.00 0.00 4.00
219 220 6.463049 CCGTATGTGATTCTATCCTTCCTGTT 60.463 42.308 0.00 0.00 0.00 3.16
220 221 6.642950 CGTATGTGATTCTATCCTTCCTGTTC 59.357 42.308 0.00 0.00 0.00 3.18
221 222 5.011090 TGTGATTCTATCCTTCCTGTTCG 57.989 43.478 0.00 0.00 0.00 3.95
222 223 4.709886 TGTGATTCTATCCTTCCTGTTCGA 59.290 41.667 0.00 0.00 0.00 3.71
223 224 5.163509 TGTGATTCTATCCTTCCTGTTCGAG 60.164 44.000 0.00 0.00 0.00 4.04
224 225 5.067936 GTGATTCTATCCTTCCTGTTCGAGA 59.932 44.000 0.00 0.00 0.00 4.04
225 226 5.835819 TGATTCTATCCTTCCTGTTCGAGAT 59.164 40.000 0.00 0.00 0.00 2.75
226 227 5.776173 TTCTATCCTTCCTGTTCGAGATC 57.224 43.478 0.00 0.00 0.00 2.75
227 228 3.815962 TCTATCCTTCCTGTTCGAGATCG 59.184 47.826 0.00 0.00 41.45 3.69
228 229 1.835494 TCCTTCCTGTTCGAGATCGT 58.165 50.000 1.70 0.00 40.80 3.73
229 230 1.472878 TCCTTCCTGTTCGAGATCGTG 59.527 52.381 1.70 0.00 40.80 4.35
230 231 1.469940 CCTTCCTGTTCGAGATCGTGG 60.470 57.143 1.70 1.89 40.80 4.94
231 232 1.202582 CTTCCTGTTCGAGATCGTGGT 59.797 52.381 1.70 0.00 40.80 4.16
232 233 2.118313 TCCTGTTCGAGATCGTGGTA 57.882 50.000 1.70 0.00 40.80 3.25
233 234 2.014857 TCCTGTTCGAGATCGTGGTAG 58.985 52.381 1.70 0.00 40.80 3.18
234 235 2.014857 CCTGTTCGAGATCGTGGTAGA 58.985 52.381 1.70 0.00 40.80 2.59
235 236 2.422479 CCTGTTCGAGATCGTGGTAGAA 59.578 50.000 1.70 0.00 40.80 2.10
236 237 3.066900 CCTGTTCGAGATCGTGGTAGAAT 59.933 47.826 1.70 0.00 40.80 2.40
237 238 4.440250 CCTGTTCGAGATCGTGGTAGAATT 60.440 45.833 1.70 0.00 40.80 2.17
238 239 4.669318 TGTTCGAGATCGTGGTAGAATTC 58.331 43.478 0.00 0.00 40.80 2.17
239 240 4.157105 TGTTCGAGATCGTGGTAGAATTCA 59.843 41.667 8.44 0.00 40.80 2.57
240 241 5.163550 TGTTCGAGATCGTGGTAGAATTCAT 60.164 40.000 8.44 0.00 40.80 2.57
241 242 4.860072 TCGAGATCGTGGTAGAATTCATG 58.140 43.478 8.44 0.00 40.80 3.07
242 243 4.338400 TCGAGATCGTGGTAGAATTCATGT 59.662 41.667 8.44 0.00 40.80 3.21
243 244 5.043903 CGAGATCGTGGTAGAATTCATGTT 58.956 41.667 8.44 0.00 34.11 2.71
244 245 5.520288 CGAGATCGTGGTAGAATTCATGTTT 59.480 40.000 8.44 0.00 34.11 2.83
245 246 6.291849 CGAGATCGTGGTAGAATTCATGTTTC 60.292 42.308 8.44 0.00 34.11 2.78
246 247 6.644347 AGATCGTGGTAGAATTCATGTTTCT 58.356 36.000 8.44 14.90 37.25 2.52
247 248 7.782049 AGATCGTGGTAGAATTCATGTTTCTA 58.218 34.615 8.44 13.40 35.19 2.10
248 249 7.923344 AGATCGTGGTAGAATTCATGTTTCTAG 59.077 37.037 16.18 8.71 36.59 2.43
249 250 6.931838 TCGTGGTAGAATTCATGTTTCTAGT 58.068 36.000 16.18 1.18 36.59 2.57
250 251 8.058667 TCGTGGTAGAATTCATGTTTCTAGTA 57.941 34.615 16.18 9.12 36.59 1.82
251 252 8.692710 TCGTGGTAGAATTCATGTTTCTAGTAT 58.307 33.333 16.18 0.65 36.59 2.12
252 253 8.755941 CGTGGTAGAATTCATGTTTCTAGTATG 58.244 37.037 16.18 11.62 36.59 2.39
253 254 9.601217 GTGGTAGAATTCATGTTTCTAGTATGT 57.399 33.333 16.18 0.00 36.59 2.29
254 255 9.599866 TGGTAGAATTCATGTTTCTAGTATGTG 57.400 33.333 16.18 0.00 36.59 3.21
255 256 9.601217 GGTAGAATTCATGTTTCTAGTATGTGT 57.399 33.333 16.18 0.00 36.59 3.72
258 259 9.896645 AGAATTCATGTTTCTAGTATGTGTCAT 57.103 29.630 8.44 0.00 31.75 3.06
263 264 9.971922 TCATGTTTCTAGTATGTGTCATAGATG 57.028 33.333 0.00 0.00 0.00 2.90
264 265 9.755804 CATGTTTCTAGTATGTGTCATAGATGT 57.244 33.333 0.00 0.00 0.00 3.06
265 266 9.755804 ATGTTTCTAGTATGTGTCATAGATGTG 57.244 33.333 0.00 0.00 0.00 3.21
266 267 8.966868 TGTTTCTAGTATGTGTCATAGATGTGA 58.033 33.333 0.00 0.00 0.00 3.58
267 268 9.973450 GTTTCTAGTATGTGTCATAGATGTGAT 57.027 33.333 0.00 0.00 0.00 3.06
269 270 9.579932 TTCTAGTATGTGTCATAGATGTGATCT 57.420 33.333 0.00 0.00 43.33 2.75
270 271 9.007901 TCTAGTATGTGTCATAGATGTGATCTG 57.992 37.037 0.00 0.00 40.51 2.90
271 272 7.594351 AGTATGTGTCATAGATGTGATCTGT 57.406 36.000 0.00 0.00 40.51 3.41
272 273 8.016301 AGTATGTGTCATAGATGTGATCTGTT 57.984 34.615 0.00 0.00 40.51 3.16
273 274 8.140628 AGTATGTGTCATAGATGTGATCTGTTC 58.859 37.037 0.00 0.00 40.51 3.18
274 275 6.284891 TGTGTCATAGATGTGATCTGTTCA 57.715 37.500 0.00 0.00 40.51 3.18
275 276 6.881570 TGTGTCATAGATGTGATCTGTTCAT 58.118 36.000 0.00 0.00 40.51 2.57
276 277 6.982724 TGTGTCATAGATGTGATCTGTTCATC 59.017 38.462 0.00 3.85 40.51 2.92
277 278 7.147776 TGTGTCATAGATGTGATCTGTTCATCT 60.148 37.037 18.86 18.86 46.33 2.90
279 280 8.355913 TGTCATAGATGTGATCTGTTCATCTAC 58.644 37.037 20.78 15.73 46.65 2.59
280 281 8.575589 GTCATAGATGTGATCTGTTCATCTACT 58.424 37.037 20.78 13.31 46.65 2.57
281 282 9.799106 TCATAGATGTGATCTGTTCATCTACTA 57.201 33.333 20.78 14.24 46.65 1.82
284 285 7.377398 AGATGTGATCTGTTCATCTACTATGC 58.623 38.462 15.77 0.00 43.98 3.14
285 286 6.721704 TGTGATCTGTTCATCTACTATGCT 57.278 37.500 0.00 0.00 36.54 3.79
286 287 7.823745 TGTGATCTGTTCATCTACTATGCTA 57.176 36.000 0.00 0.00 36.54 3.49
287 288 7.880105 TGTGATCTGTTCATCTACTATGCTAG 58.120 38.462 0.00 0.00 36.54 3.42
288 289 7.503902 TGTGATCTGTTCATCTACTATGCTAGT 59.496 37.037 0.00 2.19 38.55 2.57
289 290 8.356657 GTGATCTGTTCATCTACTATGCTAGTT 58.643 37.037 0.00 0.00 37.15 2.24
290 291 8.572185 TGATCTGTTCATCTACTATGCTAGTTC 58.428 37.037 0.00 0.00 40.14 3.01
291 292 6.960468 TCTGTTCATCTACTATGCTAGTTCG 58.040 40.000 1.93 0.00 40.14 3.95
292 293 5.520632 TGTTCATCTACTATGCTAGTTCGC 58.479 41.667 1.93 0.00 40.14 4.70
293 294 5.067283 TGTTCATCTACTATGCTAGTTCGCA 59.933 40.000 1.93 0.00 45.10 5.10
306 307 7.786178 TGCTAGTTCGCATGATTAGTTTAAT 57.214 32.000 0.00 0.00 34.44 1.40
307 308 7.851508 TGCTAGTTCGCATGATTAGTTTAATC 58.148 34.615 0.00 2.61 38.95 1.75
308 309 7.710907 TGCTAGTTCGCATGATTAGTTTAATCT 59.289 33.333 0.00 0.00 39.09 2.40
309 310 8.217778 GCTAGTTCGCATGATTAGTTTAATCTC 58.782 37.037 0.00 0.79 43.79 2.75
310 311 9.469807 CTAGTTCGCATGATTAGTTTAATCTCT 57.530 33.333 0.00 0.00 43.79 3.10
311 312 8.136057 AGTTCGCATGATTAGTTTAATCTCTG 57.864 34.615 0.00 8.20 43.79 3.35
312 313 6.530913 TCGCATGATTAGTTTAATCTCTGC 57.469 37.500 17.42 17.42 43.79 4.26
313 314 6.283694 TCGCATGATTAGTTTAATCTCTGCT 58.716 36.000 20.98 0.00 43.84 4.24
314 315 7.433680 TCGCATGATTAGTTTAATCTCTGCTA 58.566 34.615 20.98 14.36 43.84 3.49
315 316 8.090831 TCGCATGATTAGTTTAATCTCTGCTAT 58.909 33.333 20.98 4.57 43.84 2.97
316 317 8.715998 CGCATGATTAGTTTAATCTCTGCTATT 58.284 33.333 20.98 0.00 43.84 1.73
317 318 9.823098 GCATGATTAGTTTAATCTCTGCTATTG 57.177 33.333 18.75 5.98 43.34 1.90
318 319 9.823098 CATGATTAGTTTAATCTCTGCTATTGC 57.177 33.333 9.48 0.00 43.79 3.56
319 320 8.383318 TGATTAGTTTAATCTCTGCTATTGCC 57.617 34.615 9.48 0.00 43.79 4.52
320 321 6.844696 TTAGTTTAATCTCTGCTATTGCCG 57.155 37.500 0.00 0.00 38.71 5.69
321 322 4.770795 AGTTTAATCTCTGCTATTGCCGT 58.229 39.130 0.00 0.00 38.71 5.68
322 323 4.811557 AGTTTAATCTCTGCTATTGCCGTC 59.188 41.667 0.00 0.00 38.71 4.79
323 324 2.988010 AATCTCTGCTATTGCCGTCA 57.012 45.000 0.00 0.00 38.71 4.35
324 325 3.482156 AATCTCTGCTATTGCCGTCAT 57.518 42.857 0.00 0.00 38.71 3.06
325 326 2.229675 TCTCTGCTATTGCCGTCATG 57.770 50.000 0.00 0.00 38.71 3.07
326 327 1.756538 TCTCTGCTATTGCCGTCATGA 59.243 47.619 0.00 0.00 38.71 3.07
327 328 2.366590 TCTCTGCTATTGCCGTCATGAT 59.633 45.455 0.00 0.00 38.71 2.45
328 329 3.136763 CTCTGCTATTGCCGTCATGATT 58.863 45.455 0.00 0.00 38.71 2.57
329 330 3.544684 TCTGCTATTGCCGTCATGATTT 58.455 40.909 0.00 0.00 38.71 2.17
330 331 4.702831 TCTGCTATTGCCGTCATGATTTA 58.297 39.130 0.00 0.00 38.71 1.40
331 332 5.308014 TCTGCTATTGCCGTCATGATTTAT 58.692 37.500 0.00 0.00 38.71 1.40
332 333 5.409520 TCTGCTATTGCCGTCATGATTTATC 59.590 40.000 0.00 0.00 38.71 1.75
333 334 5.308014 TGCTATTGCCGTCATGATTTATCT 58.692 37.500 0.00 0.00 38.71 1.98
334 335 5.764686 TGCTATTGCCGTCATGATTTATCTT 59.235 36.000 0.00 0.00 38.71 2.40
335 336 6.073058 TGCTATTGCCGTCATGATTTATCTTC 60.073 38.462 0.00 0.00 38.71 2.87
336 337 6.148480 GCTATTGCCGTCATGATTTATCTTCT 59.852 38.462 0.00 0.00 0.00 2.85
337 338 5.739752 TTGCCGTCATGATTTATCTTCTG 57.260 39.130 0.00 0.00 0.00 3.02
338 339 4.769688 TGCCGTCATGATTTATCTTCTGT 58.230 39.130 0.00 0.00 0.00 3.41
339 340 5.185454 TGCCGTCATGATTTATCTTCTGTT 58.815 37.500 0.00 0.00 0.00 3.16
340 341 5.647658 TGCCGTCATGATTTATCTTCTGTTT 59.352 36.000 0.00 0.00 0.00 2.83
341 342 6.821160 TGCCGTCATGATTTATCTTCTGTTTA 59.179 34.615 0.00 0.00 0.00 2.01
342 343 7.498900 TGCCGTCATGATTTATCTTCTGTTTAT 59.501 33.333 0.00 0.00 0.00 1.40
343 344 8.345565 GCCGTCATGATTTATCTTCTGTTTATT 58.654 33.333 0.00 0.00 0.00 1.40
344 345 9.869844 CCGTCATGATTTATCTTCTGTTTATTC 57.130 33.333 0.00 0.00 0.00 1.75
345 346 9.573102 CGTCATGATTTATCTTCTGTTTATTCG 57.427 33.333 0.00 0.00 0.00 3.34
346 347 9.869844 GTCATGATTTATCTTCTGTTTATTCGG 57.130 33.333 0.00 0.00 0.00 4.30
347 348 9.613428 TCATGATTTATCTTCTGTTTATTCGGT 57.387 29.630 0.00 0.00 0.00 4.69
356 357 8.181487 TCTTCTGTTTATTCGGTTAAATCTCG 57.819 34.615 0.00 0.00 0.00 4.04
357 358 7.816031 TCTTCTGTTTATTCGGTTAAATCTCGT 59.184 33.333 0.00 0.00 0.00 4.18
358 359 8.984891 TTCTGTTTATTCGGTTAAATCTCGTA 57.015 30.769 0.00 0.00 0.00 3.43
359 360 8.624701 TCTGTTTATTCGGTTAAATCTCGTAG 57.375 34.615 0.00 0.00 0.00 3.51
360 361 8.246180 TCTGTTTATTCGGTTAAATCTCGTAGT 58.754 33.333 0.00 0.00 0.00 2.73
361 362 9.507280 CTGTTTATTCGGTTAAATCTCGTAGTA 57.493 33.333 0.00 0.00 0.00 1.82
362 363 9.853555 TGTTTATTCGGTTAAATCTCGTAGTAA 57.146 29.630 0.00 0.00 0.00 2.24
367 368 7.225523 TCGGTTAAATCTCGTAGTAATTTGC 57.774 36.000 0.00 0.00 0.00 3.68
368 369 7.037438 TCGGTTAAATCTCGTAGTAATTTGCT 58.963 34.615 0.00 0.00 0.00 3.91
369 370 7.221452 TCGGTTAAATCTCGTAGTAATTTGCTC 59.779 37.037 0.00 0.00 0.00 4.26
370 371 7.009815 CGGTTAAATCTCGTAGTAATTTGCTCA 59.990 37.037 0.00 0.00 0.00 4.26
371 372 8.827677 GGTTAAATCTCGTAGTAATTTGCTCAT 58.172 33.333 0.00 0.00 0.00 2.90
378 379 9.594478 TCTCGTAGTAATTTGCTCATATTTTCA 57.406 29.630 0.00 0.00 0.00 2.69
380 381 9.982291 TCGTAGTAATTTGCTCATATTTTCAAC 57.018 29.630 0.00 0.00 0.00 3.18
381 382 9.767684 CGTAGTAATTTGCTCATATTTTCAACA 57.232 29.630 0.00 0.00 0.00 3.33
433 434 4.792704 GCGAGAGAAAATTTTCCTTGCACA 60.793 41.667 31.55 0.00 40.59 4.57
499 502 7.843490 TTCCTCTAAATCGAAAGGTTGTATG 57.157 36.000 0.00 0.00 32.51 2.39
500 503 6.942976 TCCTCTAAATCGAAAGGTTGTATGT 58.057 36.000 0.00 0.00 32.51 2.29
550 553 2.821991 AATAGCGATGGAGGTGCTAC 57.178 50.000 0.00 0.00 43.36 3.58
573 576 4.080015 CAGGAACCCCATAATAGTGGTGAA 60.080 45.833 0.00 0.00 37.57 3.18
574 577 4.166144 AGGAACCCCATAATAGTGGTGAAG 59.834 45.833 0.00 0.00 37.57 3.02
575 578 4.079958 GGAACCCCATAATAGTGGTGAAGT 60.080 45.833 0.00 0.00 37.57 3.01
576 579 4.772886 ACCCCATAATAGTGGTGAAGTC 57.227 45.455 0.00 0.00 37.57 3.01
577 580 4.371681 ACCCCATAATAGTGGTGAAGTCT 58.628 43.478 0.00 0.00 37.57 3.24
578 581 4.788617 ACCCCATAATAGTGGTGAAGTCTT 59.211 41.667 0.00 0.00 37.57 3.01
579 582 5.253096 ACCCCATAATAGTGGTGAAGTCTTT 59.747 40.000 0.00 0.00 37.57 2.52
580 583 6.187682 CCCCATAATAGTGGTGAAGTCTTTT 58.812 40.000 0.00 0.00 37.57 2.27
581 584 6.663523 CCCCATAATAGTGGTGAAGTCTTTTT 59.336 38.462 0.00 0.00 37.57 1.94
699 793 0.249322 GTGATGCAGCCATGAATGCC 60.249 55.000 16.44 5.80 41.85 4.40
771 865 1.336240 CGATAGCGATGCATCTGGACA 60.336 52.381 23.73 5.58 40.82 4.02
802 896 4.142381 ACACGATCGAGATTCAGATGAACA 60.142 41.667 24.34 0.00 36.80 3.18
816 910 2.590575 AACACGGTGCAGTTCGGG 60.591 61.111 8.30 4.96 35.69 5.14
840 939 9.965902 GGGATACAGTCAATAAATTAGGATCAT 57.034 33.333 0.00 0.00 39.74 2.45
873 972 4.261238 CGTACGCTTCATCAGTCCTCTAAT 60.261 45.833 0.52 0.00 0.00 1.73
875 974 5.854010 ACGCTTCATCAGTCCTCTAATAA 57.146 39.130 0.00 0.00 0.00 1.40
876 975 6.222038 ACGCTTCATCAGTCCTCTAATAAA 57.778 37.500 0.00 0.00 0.00 1.40
877 976 6.276847 ACGCTTCATCAGTCCTCTAATAAAG 58.723 40.000 0.00 0.00 0.00 1.85
908 1008 0.035458 ATCTATAGCAGCCAACCGCC 59.965 55.000 0.00 0.00 38.78 6.13
925 1026 3.892588 ACCGCCCACTTTTATCAGAAAAA 59.107 39.130 0.00 0.00 0.00 1.94
933 1034 7.078228 CCACTTTTATCAGAAAAAGGTTCTCG 58.922 38.462 12.27 0.00 46.25 4.04
959 1061 2.670934 GCTGGTGCTGGTGTCCTG 60.671 66.667 0.00 0.00 36.03 3.86
980 1082 5.277857 TGGGAAGATCCTCGATTTACTTC 57.722 43.478 11.44 11.44 36.57 3.01
1133 1240 2.507944 CCCCATCCTCTTCGGCAG 59.492 66.667 0.00 0.00 0.00 4.85
1205 1318 3.597728 GCTCTCCCTCGCCTACGG 61.598 72.222 0.00 0.00 40.63 4.02
1456 1583 2.079158 CGACCTGACATCAATTGCTGT 58.921 47.619 14.48 14.48 0.00 4.40
1571 1701 2.621055 TGCTGCAGGTAAACGTCATTTT 59.379 40.909 17.12 0.00 0.00 1.82
1597 1728 8.430801 AATCCTCTGAATCTTCAAGATAAACG 57.569 34.615 0.00 0.00 32.89 3.60
1804 1955 2.475339 AGATGGAGGCTGATCTCAGT 57.525 50.000 8.87 0.00 45.45 3.41
1896 2051 2.185004 AAGTGTGTGTGCCTACCATC 57.815 50.000 0.00 0.00 0.00 3.51
1976 2133 5.966636 TTCTGTACACGATGATATTGTGC 57.033 39.130 8.69 0.00 46.43 4.57
2003 2160 0.889186 GCTTCTTTTCCCAGTCGCCA 60.889 55.000 0.00 0.00 0.00 5.69
2054 2211 0.107945 AGCTCCAGATTTCACTCGCC 60.108 55.000 0.00 0.00 0.00 5.54
2057 2214 0.173481 TCCAGATTTCACTCGCCGAG 59.827 55.000 13.52 13.52 35.52 4.63
2081 2238 4.633126 TGCTCTGCTAGACATTTCATCAAC 59.367 41.667 0.00 0.00 0.00 3.18
2087 2244 4.702131 GCTAGACATTTCATCAACCACCTT 59.298 41.667 0.00 0.00 0.00 3.50
2145 2302 5.207354 AGACATCCTTCTCTGAATGCTCTA 58.793 41.667 0.00 0.00 0.00 2.43
2149 2306 6.040391 ACATCCTTCTCTGAATGCTCTACTAC 59.960 42.308 0.00 0.00 0.00 2.73
2160 2317 6.476706 TGAATGCTCTACTACACATTTCATCG 59.523 38.462 0.00 0.00 33.07 3.84
2173 2330 0.988063 TTCATCGAACACCCCATGGA 59.012 50.000 15.22 0.00 34.81 3.41
2185 2342 1.421268 CCCCATGGACAAGCATAGCTA 59.579 52.381 15.22 0.00 38.25 3.32
2193 2350 4.082190 TGGACAAGCATAGCTATATCGGAC 60.082 45.833 5.77 0.00 38.25 4.79
2211 2368 1.293498 CCTGCCGTAGTGTCTTGCT 59.707 57.895 0.00 0.00 0.00 3.91
2237 2394 3.706373 AGACGCACGAATGGGCCT 61.706 61.111 4.53 0.00 42.46 5.19
2258 2415 1.914634 CCGTCCTCGAACTGAAGATG 58.085 55.000 0.00 0.00 39.71 2.90
2269 2426 1.637553 ACTGAAGATGTTGCCCCTGAT 59.362 47.619 0.00 0.00 0.00 2.90
2273 2430 4.464008 TGAAGATGTTGCCCCTGATTATC 58.536 43.478 0.00 0.00 0.00 1.75
2274 2431 4.166725 TGAAGATGTTGCCCCTGATTATCT 59.833 41.667 0.00 0.00 0.00 1.98
2275 2432 4.096190 AGATGTTGCCCCTGATTATCTG 57.904 45.455 0.00 0.00 0.00 2.90
2276 2433 2.734755 TGTTGCCCCTGATTATCTGG 57.265 50.000 10.67 10.67 35.51 3.86
2277 2434 1.322442 GTTGCCCCTGATTATCTGGC 58.678 55.000 11.97 11.94 42.49 4.85
2323 2480 2.203567 CCAACCTGGCCCGGAAAA 60.204 61.111 21.63 0.00 0.00 2.29
2324 2481 2.275380 CCAACCTGGCCCGGAAAAG 61.275 63.158 21.63 6.13 0.00 2.27
2325 2482 2.600470 AACCTGGCCCGGAAAAGC 60.600 61.111 21.63 0.00 0.00 3.51
2336 2493 2.781911 GGAAAAGCCCGATCTGACC 58.218 57.895 0.00 0.00 0.00 4.02
2337 2494 0.253327 GGAAAAGCCCGATCTGACCT 59.747 55.000 0.00 0.00 0.00 3.85
2338 2495 1.373570 GAAAAGCCCGATCTGACCTG 58.626 55.000 0.00 0.00 0.00 4.00
2339 2496 0.035056 AAAAGCCCGATCTGACCTGG 60.035 55.000 0.00 0.00 0.00 4.45
2340 2497 2.543067 AAAGCCCGATCTGACCTGGC 62.543 60.000 0.00 0.00 42.48 4.85
2341 2498 4.554036 GCCCGATCTGACCTGGCC 62.554 72.222 0.00 0.00 36.07 5.36
2342 2499 2.765807 CCCGATCTGACCTGGCCT 60.766 66.667 3.32 0.00 0.00 5.19
2343 2500 2.503061 CCGATCTGACCTGGCCTG 59.497 66.667 3.32 2.54 0.00 4.85
2344 2501 2.362369 CCGATCTGACCTGGCCTGT 61.362 63.158 3.32 0.00 0.00 4.00
2345 2502 1.599047 CGATCTGACCTGGCCTGTT 59.401 57.895 3.32 0.00 0.00 3.16
2346 2503 0.460987 CGATCTGACCTGGCCTGTTC 60.461 60.000 3.32 1.29 0.00 3.18
2347 2504 0.908198 GATCTGACCTGGCCTGTTCT 59.092 55.000 3.32 0.00 0.00 3.01
2348 2505 1.280421 GATCTGACCTGGCCTGTTCTT 59.720 52.381 3.32 0.00 0.00 2.52
2349 2506 0.397941 TCTGACCTGGCCTGTTCTTG 59.602 55.000 3.32 0.00 0.00 3.02
2350 2507 0.109342 CTGACCTGGCCTGTTCTTGT 59.891 55.000 3.32 0.00 0.00 3.16
2351 2508 0.108585 TGACCTGGCCTGTTCTTGTC 59.891 55.000 3.32 6.66 0.00 3.18
2352 2509 0.398318 GACCTGGCCTGTTCTTGTCT 59.602 55.000 3.32 0.00 0.00 3.41
2353 2510 1.623811 GACCTGGCCTGTTCTTGTCTA 59.376 52.381 3.32 0.00 0.00 2.59
2354 2511 2.237392 GACCTGGCCTGTTCTTGTCTAT 59.763 50.000 3.32 0.00 0.00 1.98
2355 2512 3.450904 ACCTGGCCTGTTCTTGTCTATA 58.549 45.455 3.32 0.00 0.00 1.31
2360 2517 2.170607 GCCTGTTCTTGTCTATAGGCCA 59.829 50.000 5.01 0.00 43.68 5.36
2362 2519 3.181461 CCTGTTCTTGTCTATAGGCCAGG 60.181 52.174 5.01 10.88 0.00 4.45
2385 2542 2.106844 GGCCTATGTTTTGAGCCCG 58.893 57.895 0.00 0.00 37.66 6.13
2418 2575 2.038659 GGCTTGGGCTTGGCATATTTA 58.961 47.619 0.00 0.00 38.73 1.40
2428 2585 5.278604 GCTTGGCATATTTACGTTTTAGGG 58.721 41.667 0.00 0.00 0.00 3.53
2452 2621 4.821935 CCCGACTGGCTTTTCCTT 57.178 55.556 0.00 0.00 35.26 3.36
2460 2629 0.975887 TGGCTTTTCCTTTGATGGGC 59.024 50.000 0.00 0.00 35.26 5.36
2464 2633 2.528564 CTTTTCCTTTGATGGGCTGGA 58.471 47.619 0.00 0.00 0.00 3.86
2525 2694 0.916809 GCCTGGGCCTAGGTTTTCTA 59.083 55.000 33.45 0.00 40.11 2.10
2527 2696 2.197465 CCTGGGCCTAGGTTTTCTACT 58.803 52.381 26.70 0.00 32.99 2.57
2541 2710 7.799081 AGGTTTTCTACTACGGGCTTTATTAT 58.201 34.615 0.00 0.00 0.00 1.28
2543 2712 7.496920 GGTTTTCTACTACGGGCTTTATTATGT 59.503 37.037 0.00 0.00 0.00 2.29
2550 2719 3.487120 GGGCTTTATTATGTCCGACCT 57.513 47.619 0.00 0.00 0.00 3.85
2563 2732 0.179073 CCGACCTGACTTATGGCCAG 60.179 60.000 13.05 0.00 0.00 4.85
2574 2743 2.337359 TATGGCCAGGTATACCCCTC 57.663 55.000 18.65 7.26 36.42 4.30
2575 2744 0.836400 ATGGCCAGGTATACCCCTCG 60.836 60.000 18.65 4.89 36.42 4.63
2577 2746 2.138179 GCCAGGTATACCCCTCGCA 61.138 63.158 18.65 0.00 38.46 5.10
2578 2747 2.050269 CCAGGTATACCCCTCGCAG 58.950 63.158 18.65 0.48 36.42 5.18
2582 2751 2.696707 CAGGTATACCCCTCGCAGTAAA 59.303 50.000 18.65 0.00 36.42 2.01
2630 2822 0.625849 ACAATTCCGGCAGATCCCTT 59.374 50.000 0.00 0.00 0.00 3.95
2632 2824 2.241176 ACAATTCCGGCAGATCCCTTAA 59.759 45.455 0.00 0.00 0.00 1.85
2653 2845 5.350504 AATAAGGCTATCCGGATGAGATG 57.649 43.478 27.55 12.11 37.47 2.90
2655 2847 2.455557 AGGCTATCCGGATGAGATGAG 58.544 52.381 27.55 15.74 37.47 2.90
2660 2852 3.534357 ATCCGGATGAGATGAGTAGGT 57.466 47.619 18.33 0.00 0.00 3.08
2697 2889 5.678955 AGGCGACTCTTTACCTAGATTTT 57.321 39.130 0.00 0.00 32.90 1.82
2710 2902 5.735766 ACCTAGATTTTGGCTCTTGACTAC 58.264 41.667 0.00 0.00 0.00 2.73
2759 2951 6.575083 CAACCGAGAGATTGTATGTTGTAG 57.425 41.667 0.00 0.00 26.97 2.74
2792 2984 9.309516 CTAAGATGTCTCTATCGACTAGATACC 57.690 40.741 0.00 0.00 40.66 2.73
2817 3009 3.367321 GCCCTAGAGTTACAAGAGTCCT 58.633 50.000 0.00 0.00 0.00 3.85
2818 3010 4.534797 GCCCTAGAGTTACAAGAGTCCTA 58.465 47.826 0.00 0.00 0.00 2.94
2819 3011 4.581409 GCCCTAGAGTTACAAGAGTCCTAG 59.419 50.000 0.00 0.00 0.00 3.02
2820 3012 5.757988 CCCTAGAGTTACAAGAGTCCTAGT 58.242 45.833 0.00 0.00 0.00 2.57
2821 3013 5.824097 CCCTAGAGTTACAAGAGTCCTAGTC 59.176 48.000 0.00 0.00 0.00 2.59
2822 3014 6.353255 CCCTAGAGTTACAAGAGTCCTAGTCT 60.353 46.154 0.00 0.00 0.00 3.24
2823 3015 6.540914 CCTAGAGTTACAAGAGTCCTAGTCTG 59.459 46.154 0.00 0.00 0.00 3.51
2824 3016 4.703093 AGAGTTACAAGAGTCCTAGTCTGC 59.297 45.833 0.00 0.00 0.00 4.26
2825 3017 4.668636 AGTTACAAGAGTCCTAGTCTGCT 58.331 43.478 0.00 0.00 0.00 4.24
2826 3018 5.817784 AGTTACAAGAGTCCTAGTCTGCTA 58.182 41.667 0.00 0.00 0.00 3.49
2827 3019 5.648960 AGTTACAAGAGTCCTAGTCTGCTAC 59.351 44.000 0.00 0.00 0.00 3.58
2828 3020 3.011119 ACAAGAGTCCTAGTCTGCTACG 58.989 50.000 0.00 0.00 0.00 3.51
2829 3021 3.011119 CAAGAGTCCTAGTCTGCTACGT 58.989 50.000 0.00 0.00 0.00 3.57
2830 3022 2.908916 AGAGTCCTAGTCTGCTACGTC 58.091 52.381 0.00 0.00 0.00 4.34
2831 3023 1.593933 GAGTCCTAGTCTGCTACGTCG 59.406 57.143 0.00 0.00 0.00 5.12
2832 3024 0.656785 GTCCTAGTCTGCTACGTCGG 59.343 60.000 0.00 0.00 0.00 4.79
2833 3025 0.251354 TCCTAGTCTGCTACGTCGGT 59.749 55.000 0.00 0.00 0.00 4.69
2834 3026 0.377554 CCTAGTCTGCTACGTCGGTG 59.622 60.000 0.00 0.00 0.00 4.94
2835 3027 0.377554 CTAGTCTGCTACGTCGGTGG 59.622 60.000 0.00 0.00 0.00 4.61
2836 3028 0.036105 TAGTCTGCTACGTCGGTGGA 60.036 55.000 0.00 0.00 0.00 4.02
2837 3029 1.136984 GTCTGCTACGTCGGTGGAG 59.863 63.158 0.00 0.00 0.00 3.86
2838 3030 2.044555 TCTGCTACGTCGGTGGAGG 61.045 63.158 0.00 0.00 0.00 4.30
2839 3031 3.064987 CTGCTACGTCGGTGGAGGG 62.065 68.421 0.00 0.00 32.40 4.30
2840 3032 3.834799 GCTACGTCGGTGGAGGGG 61.835 72.222 0.00 0.00 32.40 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.787001 GAGGCGGGGTTCCAGAGG 61.787 72.222 0.00 0.00 0.00 3.69
2 3 2.685380 AGAGGCGGGGTTCCAGAG 60.685 66.667 0.00 0.00 0.00 3.35
3 4 2.683933 GAGAGGCGGGGTTCCAGA 60.684 66.667 0.00 0.00 0.00 3.86
4 5 4.148825 CGAGAGGCGGGGTTCCAG 62.149 72.222 0.00 0.00 36.03 3.86
6 7 4.452733 CACGAGAGGCGGGGTTCC 62.453 72.222 0.00 0.00 46.49 3.62
7 8 2.630592 GATCACGAGAGGCGGGGTTC 62.631 65.000 0.00 0.00 45.52 3.62
8 9 2.683933 ATCACGAGAGGCGGGGTT 60.684 61.111 0.00 0.00 45.52 4.11
9 10 3.148279 GATCACGAGAGGCGGGGT 61.148 66.667 0.00 0.00 45.52 4.95
10 11 2.978298 TAGGATCACGAGAGGCGGGG 62.978 65.000 0.00 0.00 45.52 5.73
12 13 1.469308 GTATAGGATCACGAGAGGCGG 59.531 57.143 0.00 0.00 46.49 6.13
13 14 3.185943 TCGTATAGGATCACGAGAGGCG 61.186 54.545 2.18 0.00 41.89 5.52
14 15 2.424557 TCGTATAGGATCACGAGAGGC 58.575 52.381 2.18 0.00 41.89 4.70
19 20 3.306849 CCCTCTCTCGTATAGGATCACGA 60.307 52.174 5.95 5.95 44.32 4.35
20 21 3.004171 CCCTCTCTCGTATAGGATCACG 58.996 54.545 0.00 0.00 39.48 4.35
21 22 3.349022 CCCCTCTCTCGTATAGGATCAC 58.651 54.545 0.00 0.00 31.64 3.06
22 23 2.291024 GCCCCTCTCTCGTATAGGATCA 60.291 54.545 0.00 0.00 31.64 2.92
23 24 2.371306 GCCCCTCTCTCGTATAGGATC 58.629 57.143 0.00 0.00 31.64 3.36
24 25 1.340211 CGCCCCTCTCTCGTATAGGAT 60.340 57.143 0.00 0.00 31.64 3.24
25 26 0.036448 CGCCCCTCTCTCGTATAGGA 59.964 60.000 0.00 0.00 31.64 2.94
26 27 0.036448 TCGCCCCTCTCTCGTATAGG 59.964 60.000 0.00 0.00 0.00 2.57
27 28 2.011222 GATCGCCCCTCTCTCGTATAG 58.989 57.143 0.00 0.00 0.00 1.31
28 29 1.350019 TGATCGCCCCTCTCTCGTATA 59.650 52.381 0.00 0.00 0.00 1.47
29 30 0.110678 TGATCGCCCCTCTCTCGTAT 59.889 55.000 0.00 0.00 0.00 3.06
30 31 0.535328 CTGATCGCCCCTCTCTCGTA 60.535 60.000 0.00 0.00 0.00 3.43
31 32 1.826054 CTGATCGCCCCTCTCTCGT 60.826 63.158 0.00 0.00 0.00 4.18
32 33 2.560119 CCTGATCGCCCCTCTCTCG 61.560 68.421 0.00 0.00 0.00 4.04
33 34 1.045911 AACCTGATCGCCCCTCTCTC 61.046 60.000 0.00 0.00 0.00 3.20
34 35 0.618968 AAACCTGATCGCCCCTCTCT 60.619 55.000 0.00 0.00 0.00 3.10
35 36 0.253327 AAAACCTGATCGCCCCTCTC 59.747 55.000 0.00 0.00 0.00 3.20
36 37 0.698818 AAAAACCTGATCGCCCCTCT 59.301 50.000 0.00 0.00 0.00 3.69
37 38 0.811281 CAAAAACCTGATCGCCCCTC 59.189 55.000 0.00 0.00 0.00 4.30
38 39 0.611896 CCAAAAACCTGATCGCCCCT 60.612 55.000 0.00 0.00 0.00 4.79
39 40 1.604147 CCCAAAAACCTGATCGCCCC 61.604 60.000 0.00 0.00 0.00 5.80
40 41 1.604147 CCCCAAAAACCTGATCGCCC 61.604 60.000 0.00 0.00 0.00 6.13
41 42 0.610785 TCCCCAAAAACCTGATCGCC 60.611 55.000 0.00 0.00 0.00 5.54
42 43 0.811281 CTCCCCAAAAACCTGATCGC 59.189 55.000 0.00 0.00 0.00 4.58
43 44 0.811281 GCTCCCCAAAAACCTGATCG 59.189 55.000 0.00 0.00 0.00 3.69
44 45 0.811281 CGCTCCCCAAAAACCTGATC 59.189 55.000 0.00 0.00 0.00 2.92
45 46 1.250840 GCGCTCCCCAAAAACCTGAT 61.251 55.000 0.00 0.00 0.00 2.90
46 47 1.901464 GCGCTCCCCAAAAACCTGA 60.901 57.895 0.00 0.00 0.00 3.86
47 48 2.199652 TGCGCTCCCCAAAAACCTG 61.200 57.895 9.73 0.00 0.00 4.00
48 49 2.197324 TGCGCTCCCCAAAAACCT 59.803 55.556 9.73 0.00 0.00 3.50
49 50 2.142357 GAGTGCGCTCCCCAAAAACC 62.142 60.000 16.69 0.00 35.76 3.27
50 51 1.285950 GAGTGCGCTCCCCAAAAAC 59.714 57.895 16.69 0.00 35.76 2.43
51 52 2.258013 CGAGTGCGCTCCCCAAAAA 61.258 57.895 21.21 0.00 38.49 1.94
52 53 2.668212 CGAGTGCGCTCCCCAAAA 60.668 61.111 21.21 0.00 38.49 2.44
53 54 3.936203 ACGAGTGCGCTCCCCAAA 61.936 61.111 21.21 0.00 42.48 3.28
54 55 4.680237 CACGAGTGCGCTCCCCAA 62.680 66.667 21.21 0.00 42.48 4.12
64 65 0.446616 TACTAGCAGTCGCACGAGTG 59.553 55.000 20.66 20.66 45.58 3.51
65 66 0.727970 CTACTAGCAGTCGCACGAGT 59.272 55.000 0.00 0.00 42.27 4.18
66 67 0.590230 GCTACTAGCAGTCGCACGAG 60.590 60.000 2.96 0.00 41.89 4.18
67 68 1.428219 GCTACTAGCAGTCGCACGA 59.572 57.895 2.96 0.00 41.89 4.35
68 69 1.934956 CGCTACTAGCAGTCGCACG 60.935 63.158 8.78 0.00 42.58 5.34
69 70 0.862283 GTCGCTACTAGCAGTCGCAC 60.862 60.000 8.78 6.62 42.58 5.34
70 71 1.428219 GTCGCTACTAGCAGTCGCA 59.572 57.895 8.78 0.27 42.58 5.10
71 72 1.651730 CGTCGCTACTAGCAGTCGC 60.652 63.158 8.78 0.00 42.58 5.19
72 73 0.315220 GTCGTCGCTACTAGCAGTCG 60.315 60.000 8.78 9.94 42.58 4.18
73 74 1.008329 AGTCGTCGCTACTAGCAGTC 58.992 55.000 8.78 0.00 42.58 3.51
74 75 1.397692 GAAGTCGTCGCTACTAGCAGT 59.602 52.381 8.78 0.00 42.58 4.40
75 76 1.592590 CGAAGTCGTCGCTACTAGCAG 60.593 57.143 8.78 1.87 44.14 4.24
76 77 0.372679 CGAAGTCGTCGCTACTAGCA 59.627 55.000 8.78 0.00 44.14 3.49
77 78 3.130835 CGAAGTCGTCGCTACTAGC 57.869 57.895 0.00 0.00 44.14 3.42
93 94 0.662374 GAAGAAGTCGTCGTTGGCGA 60.662 55.000 0.00 0.00 45.79 5.54
94 95 1.615107 GGAAGAAGTCGTCGTTGGCG 61.615 60.000 0.00 0.00 39.92 5.69
95 96 1.289800 GGGAAGAAGTCGTCGTTGGC 61.290 60.000 0.00 0.00 0.00 4.52
96 97 0.669625 GGGGAAGAAGTCGTCGTTGG 60.670 60.000 0.00 0.00 0.00 3.77
97 98 1.007336 CGGGGAAGAAGTCGTCGTTG 61.007 60.000 0.00 0.00 0.00 4.10
98 99 1.174712 TCGGGGAAGAAGTCGTCGTT 61.175 55.000 0.00 0.00 0.00 3.85
99 100 1.601759 TCGGGGAAGAAGTCGTCGT 60.602 57.895 0.00 0.00 0.00 4.34
100 101 1.154073 GTCGGGGAAGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
101 102 1.214853 GGTCGGGGAAGAAGTCGTC 59.785 63.158 0.00 0.00 0.00 4.20
102 103 1.228800 AGGTCGGGGAAGAAGTCGT 60.229 57.895 0.00 0.00 0.00 4.34
103 104 1.511768 GAGGTCGGGGAAGAAGTCG 59.488 63.158 0.00 0.00 0.00 4.18
104 105 1.511768 CGAGGTCGGGGAAGAAGTC 59.488 63.158 0.00 0.00 35.37 3.01
105 106 3.696084 CGAGGTCGGGGAAGAAGT 58.304 61.111 0.00 0.00 35.37 3.01
115 116 1.519455 GATGAGGTTGCCGAGGTCG 60.519 63.158 0.00 0.00 39.44 4.79
116 117 1.153349 GGATGAGGTTGCCGAGGTC 60.153 63.158 0.00 0.00 0.00 3.85
117 118 1.613630 AGGATGAGGTTGCCGAGGT 60.614 57.895 0.00 0.00 0.00 3.85
118 119 1.144936 GAGGATGAGGTTGCCGAGG 59.855 63.158 0.00 0.00 0.00 4.63
119 120 1.227089 CGAGGATGAGGTTGCCGAG 60.227 63.158 0.00 0.00 0.00 4.63
120 121 1.680989 TCGAGGATGAGGTTGCCGA 60.681 57.895 0.00 0.00 0.00 5.54
121 122 1.519455 GTCGAGGATGAGGTTGCCG 60.519 63.158 0.00 0.00 0.00 5.69
122 123 1.519455 CGTCGAGGATGAGGTTGCC 60.519 63.158 0.00 0.00 0.00 4.52
123 124 0.802607 GTCGTCGAGGATGAGGTTGC 60.803 60.000 11.48 0.00 0.00 4.17
124 125 0.526211 TGTCGTCGAGGATGAGGTTG 59.474 55.000 11.48 0.00 0.00 3.77
125 126 1.135139 CATGTCGTCGAGGATGAGGTT 59.865 52.381 11.48 0.00 0.00 3.50
126 127 0.741326 CATGTCGTCGAGGATGAGGT 59.259 55.000 11.48 0.00 0.00 3.85
127 128 0.031314 CCATGTCGTCGAGGATGAGG 59.969 60.000 11.48 9.30 0.00 3.86
128 129 0.031314 CCCATGTCGTCGAGGATGAG 59.969 60.000 11.48 4.15 0.00 2.90
129 130 2.016393 GCCCATGTCGTCGAGGATGA 62.016 60.000 11.48 1.74 0.00 2.92
130 131 1.592669 GCCCATGTCGTCGAGGATG 60.593 63.158 11.48 6.43 0.00 3.51
131 132 2.815308 GCCCATGTCGTCGAGGAT 59.185 61.111 11.48 0.00 0.00 3.24
132 133 3.822192 CGCCCATGTCGTCGAGGA 61.822 66.667 3.17 3.17 0.00 3.71
133 134 3.822192 TCGCCCATGTCGTCGAGG 61.822 66.667 0.00 0.00 0.00 4.63
134 135 2.579787 GTCGCCCATGTCGTCGAG 60.580 66.667 0.00 0.00 0.00 4.04
135 136 2.921797 TTGTCGCCCATGTCGTCGA 61.922 57.895 0.00 0.00 0.00 4.20
136 137 2.431771 TTGTCGCCCATGTCGTCG 60.432 61.111 4.83 0.00 0.00 5.12
137 138 2.726691 CGTTGTCGCCCATGTCGTC 61.727 63.158 4.83 0.93 0.00 4.20
138 139 2.736995 CGTTGTCGCCCATGTCGT 60.737 61.111 4.83 0.00 0.00 4.34
139 140 2.726691 GACGTTGTCGCCCATGTCG 61.727 63.158 0.00 0.00 41.18 4.35
140 141 1.225376 TTGACGTTGTCGCCCATGTC 61.225 55.000 0.00 0.00 41.18 3.06
141 142 0.605319 ATTGACGTTGTCGCCCATGT 60.605 50.000 0.00 0.00 41.18 3.21
142 143 0.179192 CATTGACGTTGTCGCCCATG 60.179 55.000 0.00 0.00 41.18 3.66
143 144 1.922135 GCATTGACGTTGTCGCCCAT 61.922 55.000 0.00 0.00 41.18 4.00
144 145 2.612567 GCATTGACGTTGTCGCCCA 61.613 57.895 0.00 0.00 41.18 5.36
145 146 2.175811 GCATTGACGTTGTCGCCC 59.824 61.111 0.00 0.00 41.18 6.13
146 147 2.175811 GGCATTGACGTTGTCGCC 59.824 61.111 4.55 4.55 41.18 5.54
147 148 2.202171 CGGCATTGACGTTGTCGC 60.202 61.111 3.04 0.00 41.18 5.19
148 149 2.474266 CCGGCATTGACGTTGTCG 59.526 61.111 11.60 5.77 41.64 4.35
149 150 2.175811 GCCGGCATTGACGTTGTC 59.824 61.111 24.80 0.00 28.54 3.18
150 151 3.722295 CGCCGGCATTGACGTTGT 61.722 61.111 28.98 0.00 28.54 3.32
151 152 4.459331 CCGCCGGCATTGACGTTG 62.459 66.667 28.98 6.19 28.54 4.10
180 181 2.584261 ATACGGTGCAGCAGGAGCAG 62.584 60.000 17.33 0.00 43.63 4.24
181 182 2.659063 ATACGGTGCAGCAGGAGCA 61.659 57.895 17.33 0.00 45.49 4.26
182 183 2.176273 CATACGGTGCAGCAGGAGC 61.176 63.158 17.33 0.00 42.56 4.70
183 184 1.086067 CACATACGGTGCAGCAGGAG 61.086 60.000 17.33 5.33 41.36 3.69
184 185 1.079197 CACATACGGTGCAGCAGGA 60.079 57.895 17.33 5.91 41.36 3.86
185 186 3.489731 CACATACGGTGCAGCAGG 58.510 61.111 17.33 2.74 41.36 4.85
193 194 5.011125 CAGGAAGGATAGAATCACATACGGT 59.989 44.000 0.00 0.00 0.00 4.83
194 195 5.011125 ACAGGAAGGATAGAATCACATACGG 59.989 44.000 0.00 0.00 0.00 4.02
195 196 6.090483 ACAGGAAGGATAGAATCACATACG 57.910 41.667 0.00 0.00 0.00 3.06
196 197 6.642950 CGAACAGGAAGGATAGAATCACATAC 59.357 42.308 0.00 0.00 0.00 2.39
197 198 6.549736 TCGAACAGGAAGGATAGAATCACATA 59.450 38.462 0.00 0.00 0.00 2.29
198 199 5.363868 TCGAACAGGAAGGATAGAATCACAT 59.636 40.000 0.00 0.00 0.00 3.21
199 200 4.709886 TCGAACAGGAAGGATAGAATCACA 59.290 41.667 0.00 0.00 0.00 3.58
200 201 5.067936 TCTCGAACAGGAAGGATAGAATCAC 59.932 44.000 0.00 0.00 0.00 3.06
201 202 5.201243 TCTCGAACAGGAAGGATAGAATCA 58.799 41.667 0.00 0.00 0.00 2.57
202 203 5.776173 TCTCGAACAGGAAGGATAGAATC 57.224 43.478 0.00 0.00 0.00 2.52
203 204 5.048364 CGATCTCGAACAGGAAGGATAGAAT 60.048 44.000 0.00 0.00 43.02 2.40
204 205 4.276183 CGATCTCGAACAGGAAGGATAGAA 59.724 45.833 0.00 0.00 43.02 2.10
205 206 3.815962 CGATCTCGAACAGGAAGGATAGA 59.184 47.826 0.00 0.00 43.02 1.98
206 207 3.566322 ACGATCTCGAACAGGAAGGATAG 59.434 47.826 6.60 0.00 43.02 2.08
207 208 3.315470 CACGATCTCGAACAGGAAGGATA 59.685 47.826 6.60 0.00 43.02 2.59
208 209 2.099921 CACGATCTCGAACAGGAAGGAT 59.900 50.000 6.60 0.00 43.02 3.24
209 210 1.472878 CACGATCTCGAACAGGAAGGA 59.527 52.381 6.60 0.00 43.02 3.36
210 211 1.469940 CCACGATCTCGAACAGGAAGG 60.470 57.143 6.60 0.00 43.02 3.46
211 212 1.202582 ACCACGATCTCGAACAGGAAG 59.797 52.381 6.60 0.00 43.02 3.46
212 213 1.254026 ACCACGATCTCGAACAGGAA 58.746 50.000 6.60 0.00 43.02 3.36
213 214 2.014857 CTACCACGATCTCGAACAGGA 58.985 52.381 6.60 0.00 43.02 3.86
214 215 2.014857 TCTACCACGATCTCGAACAGG 58.985 52.381 6.60 5.32 43.02 4.00
215 216 3.759527 TTCTACCACGATCTCGAACAG 57.240 47.619 6.60 0.00 43.02 3.16
216 217 4.157105 TGAATTCTACCACGATCTCGAACA 59.843 41.667 7.05 0.00 43.02 3.18
217 218 4.669318 TGAATTCTACCACGATCTCGAAC 58.331 43.478 7.05 0.00 43.02 3.95
218 219 4.976224 TGAATTCTACCACGATCTCGAA 57.024 40.909 7.05 0.00 43.02 3.71
219 220 4.338400 ACATGAATTCTACCACGATCTCGA 59.662 41.667 7.05 0.00 43.02 4.04
220 221 4.611943 ACATGAATTCTACCACGATCTCG 58.388 43.478 7.05 0.00 46.33 4.04
221 222 6.758886 AGAAACATGAATTCTACCACGATCTC 59.241 38.462 14.15 0.00 35.43 2.75
222 223 6.644347 AGAAACATGAATTCTACCACGATCT 58.356 36.000 14.15 0.00 35.43 2.75
223 224 6.910536 AGAAACATGAATTCTACCACGATC 57.089 37.500 14.15 0.00 35.43 3.69
224 225 7.556844 ACTAGAAACATGAATTCTACCACGAT 58.443 34.615 16.49 0.00 38.13 3.73
225 226 6.931838 ACTAGAAACATGAATTCTACCACGA 58.068 36.000 16.49 3.95 38.13 4.35
226 227 8.755941 CATACTAGAAACATGAATTCTACCACG 58.244 37.037 16.49 11.76 38.13 4.94
227 228 9.601217 ACATACTAGAAACATGAATTCTACCAC 57.399 33.333 16.49 0.00 38.13 4.16
228 229 9.599866 CACATACTAGAAACATGAATTCTACCA 57.400 33.333 16.49 10.50 38.13 3.25
229 230 9.601217 ACACATACTAGAAACATGAATTCTACC 57.399 33.333 16.49 0.00 38.13 3.18
232 233 9.896645 ATGACACATACTAGAAACATGAATTCT 57.103 29.630 18.00 18.00 40.18 2.40
237 238 9.971922 CATCTATGACACATACTAGAAACATGA 57.028 33.333 0.00 0.00 0.00 3.07
238 239 9.755804 ACATCTATGACACATACTAGAAACATG 57.244 33.333 0.00 0.00 0.00 3.21
239 240 9.755804 CACATCTATGACACATACTAGAAACAT 57.244 33.333 0.00 0.00 0.00 2.71
240 241 8.966868 TCACATCTATGACACATACTAGAAACA 58.033 33.333 0.00 0.00 0.00 2.83
241 242 9.973450 ATCACATCTATGACACATACTAGAAAC 57.027 33.333 0.00 0.00 0.00 2.78
243 244 9.579932 AGATCACATCTATGACACATACTAGAA 57.420 33.333 0.00 0.00 38.00 2.10
244 245 9.007901 CAGATCACATCTATGACACATACTAGA 57.992 37.037 0.00 0.00 37.58 2.43
245 246 8.791675 ACAGATCACATCTATGACACATACTAG 58.208 37.037 0.00 0.00 37.58 2.57
246 247 8.697507 ACAGATCACATCTATGACACATACTA 57.302 34.615 0.00 0.00 37.58 1.82
247 248 7.594351 ACAGATCACATCTATGACACATACT 57.406 36.000 0.00 0.00 37.58 2.12
248 249 7.922811 TGAACAGATCACATCTATGACACATAC 59.077 37.037 0.00 0.00 37.58 2.39
249 250 8.010733 TGAACAGATCACATCTATGACACATA 57.989 34.615 0.00 0.00 37.58 2.29
250 251 6.881570 TGAACAGATCACATCTATGACACAT 58.118 36.000 0.00 0.00 37.58 3.21
251 252 6.284891 TGAACAGATCACATCTATGACACA 57.715 37.500 0.00 0.00 37.58 3.72
252 253 7.208777 AGATGAACAGATCACATCTATGACAC 58.791 38.462 16.92 0.00 45.55 3.67
253 254 7.357429 AGATGAACAGATCACATCTATGACA 57.643 36.000 16.92 4.15 45.55 3.58
258 259 8.518702 GCATAGTAGATGAACAGATCACATCTA 58.481 37.037 18.66 18.66 45.55 1.98
260 261 7.377398 AGCATAGTAGATGAACAGATCACATC 58.623 38.462 0.00 4.97 41.93 3.06
261 262 7.300556 AGCATAGTAGATGAACAGATCACAT 57.699 36.000 0.00 0.00 41.93 3.21
262 263 6.721704 AGCATAGTAGATGAACAGATCACA 57.278 37.500 0.00 0.00 41.93 3.58
282 283 7.710907 AGATTAAACTAATCATGCGAACTAGCA 59.289 33.333 8.66 0.00 45.41 3.49
283 284 8.077836 AGATTAAACTAATCATGCGAACTAGC 57.922 34.615 8.66 0.00 45.41 3.42
284 285 9.469807 AGAGATTAAACTAATCATGCGAACTAG 57.530 33.333 8.66 0.00 45.41 2.57
285 286 9.249457 CAGAGATTAAACTAATCATGCGAACTA 57.751 33.333 8.66 0.00 45.41 2.24
286 287 7.254590 GCAGAGATTAAACTAATCATGCGAACT 60.255 37.037 15.10 0.00 45.41 3.01
287 288 6.848296 GCAGAGATTAAACTAATCATGCGAAC 59.152 38.462 15.10 0.00 45.41 3.95
288 289 6.948353 GCAGAGATTAAACTAATCATGCGAA 58.052 36.000 15.10 0.00 45.41 4.70
289 290 6.530913 GCAGAGATTAAACTAATCATGCGA 57.469 37.500 15.10 0.00 45.41 5.10
292 293 9.823098 GCAATAGCAGAGATTAAACTAATCATG 57.177 33.333 8.66 7.75 42.67 3.07
293 294 9.007901 GGCAATAGCAGAGATTAAACTAATCAT 57.992 33.333 8.66 0.00 43.80 2.45
294 295 7.171508 CGGCAATAGCAGAGATTAAACTAATCA 59.828 37.037 8.66 0.00 43.80 2.57
295 296 7.171678 ACGGCAATAGCAGAGATTAAACTAATC 59.828 37.037 0.00 0.00 44.61 1.75
296 297 6.992715 ACGGCAATAGCAGAGATTAAACTAAT 59.007 34.615 0.00 0.00 44.61 1.73
297 298 6.346096 ACGGCAATAGCAGAGATTAAACTAA 58.654 36.000 0.00 0.00 44.61 2.24
298 299 5.914033 ACGGCAATAGCAGAGATTAAACTA 58.086 37.500 0.00 0.00 44.61 2.24
299 300 4.770795 ACGGCAATAGCAGAGATTAAACT 58.229 39.130 0.00 0.00 44.61 2.66
300 301 4.570772 TGACGGCAATAGCAGAGATTAAAC 59.429 41.667 0.00 0.00 44.61 2.01
301 302 4.765273 TGACGGCAATAGCAGAGATTAAA 58.235 39.130 0.00 0.00 44.61 1.52
302 303 4.400529 TGACGGCAATAGCAGAGATTAA 57.599 40.909 0.00 0.00 44.61 1.40
303 304 4.039124 TCATGACGGCAATAGCAGAGATTA 59.961 41.667 0.00 0.00 44.61 1.75
304 305 2.988010 TGACGGCAATAGCAGAGATT 57.012 45.000 0.00 0.00 44.61 2.40
305 306 2.366590 TCATGACGGCAATAGCAGAGAT 59.633 45.455 0.00 0.00 44.61 2.75
306 307 1.756538 TCATGACGGCAATAGCAGAGA 59.243 47.619 0.00 0.00 44.61 3.10
307 308 2.229675 TCATGACGGCAATAGCAGAG 57.770 50.000 0.00 0.00 44.61 3.35
308 309 2.916702 ATCATGACGGCAATAGCAGA 57.083 45.000 0.00 0.00 44.61 4.26
309 310 3.976793 AAATCATGACGGCAATAGCAG 57.023 42.857 0.00 0.00 44.61 4.24
310 311 5.308014 AGATAAATCATGACGGCAATAGCA 58.692 37.500 0.00 0.00 44.61 3.49
311 312 5.869753 AGATAAATCATGACGGCAATAGC 57.130 39.130 0.00 0.00 41.10 2.97
312 313 7.172190 ACAGAAGATAAATCATGACGGCAATAG 59.828 37.037 0.00 0.00 0.00 1.73
313 314 6.992123 ACAGAAGATAAATCATGACGGCAATA 59.008 34.615 0.00 0.00 0.00 1.90
314 315 5.824624 ACAGAAGATAAATCATGACGGCAAT 59.175 36.000 0.00 0.00 0.00 3.56
315 316 5.185454 ACAGAAGATAAATCATGACGGCAA 58.815 37.500 0.00 0.00 0.00 4.52
316 317 4.769688 ACAGAAGATAAATCATGACGGCA 58.230 39.130 0.00 0.00 0.00 5.69
317 318 5.741388 AACAGAAGATAAATCATGACGGC 57.259 39.130 0.00 0.00 0.00 5.68
318 319 9.869844 GAATAAACAGAAGATAAATCATGACGG 57.130 33.333 0.00 0.00 0.00 4.79
319 320 9.573102 CGAATAAACAGAAGATAAATCATGACG 57.427 33.333 0.00 0.00 0.00 4.35
320 321 9.869844 CCGAATAAACAGAAGATAAATCATGAC 57.130 33.333 0.00 0.00 0.00 3.06
321 322 9.613428 ACCGAATAAACAGAAGATAAATCATGA 57.387 29.630 0.00 0.00 0.00 3.07
330 331 8.818057 CGAGATTTAACCGAATAAACAGAAGAT 58.182 33.333 0.00 0.00 0.00 2.40
331 332 7.816031 ACGAGATTTAACCGAATAAACAGAAGA 59.184 33.333 0.00 0.00 0.00 2.87
332 333 7.960793 ACGAGATTTAACCGAATAAACAGAAG 58.039 34.615 0.00 0.00 0.00 2.85
333 334 7.894376 ACGAGATTTAACCGAATAAACAGAA 57.106 32.000 0.00 0.00 0.00 3.02
334 335 8.246180 ACTACGAGATTTAACCGAATAAACAGA 58.754 33.333 0.00 0.00 0.00 3.41
335 336 8.403606 ACTACGAGATTTAACCGAATAAACAG 57.596 34.615 0.00 0.00 0.00 3.16
336 337 9.853555 TTACTACGAGATTTAACCGAATAAACA 57.146 29.630 0.00 0.00 0.00 2.83
341 342 8.333186 GCAAATTACTACGAGATTTAACCGAAT 58.667 33.333 0.00 0.00 0.00 3.34
342 343 7.546667 AGCAAATTACTACGAGATTTAACCGAA 59.453 33.333 0.00 0.00 0.00 4.30
343 344 7.037438 AGCAAATTACTACGAGATTTAACCGA 58.963 34.615 0.00 0.00 0.00 4.69
344 345 7.009815 TGAGCAAATTACTACGAGATTTAACCG 59.990 37.037 0.00 0.00 0.00 4.44
345 346 8.193250 TGAGCAAATTACTACGAGATTTAACC 57.807 34.615 0.00 0.00 0.00 2.85
352 353 9.594478 TGAAAATATGAGCAAATTACTACGAGA 57.406 29.630 0.00 0.00 0.00 4.04
354 355 9.982291 GTTGAAAATATGAGCAAATTACTACGA 57.018 29.630 0.00 0.00 0.00 3.43
355 356 9.767684 TGTTGAAAATATGAGCAAATTACTACG 57.232 29.630 0.00 0.00 0.00 3.51
379 380 9.618890 GCCCTCATGTTATCATATACATATTGT 57.381 33.333 0.00 0.00 33.42 2.71
380 381 9.842775 AGCCCTCATGTTATCATATACATATTG 57.157 33.333 0.00 0.00 33.42 1.90
382 383 8.363390 CGAGCCCTCATGTTATCATATACATAT 58.637 37.037 0.00 0.00 33.42 1.78
383 384 7.201911 CCGAGCCCTCATGTTATCATATACATA 60.202 40.741 0.00 0.00 33.42 2.29
463 466 4.654701 TTTAGAGGAAAGGGGAGGGATA 57.345 45.455 0.00 0.00 0.00 2.59
532 535 1.615883 CTGTAGCACCTCCATCGCTAT 59.384 52.381 0.00 0.00 40.18 2.97
550 553 3.458118 TCACCACTATTATGGGGTTCCTG 59.542 47.826 0.00 0.00 44.30 3.86
632 673 1.217882 GGTCATTCTTCCGCGGTATG 58.782 55.000 27.15 22.00 0.00 2.39
680 774 3.267900 GCATTCATGGCTGCATCAC 57.732 52.632 13.44 0.00 38.28 3.06
699 793 6.492007 AGATTTGCTCTTCACACTACATTG 57.508 37.500 0.00 0.00 0.00 2.82
771 865 1.254026 TCTCGATCGTGTGAACCCTT 58.746 50.000 15.94 0.00 0.00 3.95
802 896 1.217244 GTATCCCGAACTGCACCGT 59.783 57.895 0.00 0.00 0.00 4.83
873 972 6.486993 TGCTATAGATGCTCGACTTCTCTTTA 59.513 38.462 3.21 0.00 34.73 1.85
875 974 4.824537 TGCTATAGATGCTCGACTTCTCTT 59.175 41.667 3.21 1.78 34.73 2.85
876 975 4.393834 TGCTATAGATGCTCGACTTCTCT 58.606 43.478 3.21 0.00 34.73 3.10
877 976 4.722194 CTGCTATAGATGCTCGACTTCTC 58.278 47.826 3.21 0.00 34.73 2.87
908 1008 7.078228 CGAGAACCTTTTTCTGATAAAAGTGG 58.922 38.462 16.48 8.80 41.40 4.00
925 1026 2.948720 GCAGTGAGGCCGAGAACCT 61.949 63.158 0.00 0.00 41.41 3.50
949 1051 0.543749 GGATCTTCCCAGGACACCAG 59.456 60.000 0.00 0.00 0.00 4.00
959 1061 4.037684 TCGAAGTAAATCGAGGATCTTCCC 59.962 45.833 13.54 0.00 46.12 3.97
980 1082 3.384014 GACGACGACCTGGAGCTCG 62.384 68.421 7.83 1.57 35.96 5.03
1133 1240 1.069978 GGAAGTAGAGGATGAGCAGGC 59.930 57.143 0.00 0.00 0.00 4.85
1468 1595 2.975410 TGCAAGAACAAGCAGATTCG 57.025 45.000 0.00 0.00 35.51 3.34
1571 1701 9.534565 CGTTTATCTTGAAGATTCAGAGGATTA 57.465 33.333 13.54 0.00 38.61 1.75
1597 1728 1.202279 TGTATGCCGCACATGATTTGC 60.202 47.619 0.00 0.00 40.06 3.68
1610 1751 7.439157 TCTTTGCTACATTCATATGTATGCC 57.561 36.000 19.02 10.34 44.16 4.40
1714 1856 3.250762 GCTTGTTGAGTATCTGTGCACAA 59.749 43.478 21.98 12.25 34.92 3.33
1896 2051 4.095932 AGACAGCATGCATAAACATCACAG 59.904 41.667 21.98 0.00 42.53 3.66
1939 2094 1.940613 ACAGAAAGTTCGGCTGTTCAC 59.059 47.619 0.00 0.00 39.69 3.18
1976 2133 5.163814 CGACTGGGAAAAGAAGCTTCAATAG 60.164 44.000 27.57 16.30 0.00 1.73
2003 2160 1.133853 GCCAGGATGCATCTTCTTCCT 60.134 52.381 25.28 12.47 40.14 3.36
2054 2211 2.575694 AATGTCTAGCAGAGCACTCG 57.424 50.000 0.00 0.00 34.09 4.18
2057 2214 4.186926 TGATGAAATGTCTAGCAGAGCAC 58.813 43.478 0.00 0.00 0.00 4.40
2059 2216 4.034975 GGTTGATGAAATGTCTAGCAGAGC 59.965 45.833 0.00 0.00 0.00 4.09
2087 2244 2.426738 GTTGCAGCTATGTTTGCCCATA 59.573 45.455 0.00 0.00 39.54 2.74
2096 2253 2.483714 CCGGATACAGTTGCAGCTATGT 60.484 50.000 1.52 1.38 0.00 2.29
2145 2302 4.000988 GGGTGTTCGATGAAATGTGTAGT 58.999 43.478 0.00 0.00 0.00 2.73
2149 2306 2.158559 TGGGGTGTTCGATGAAATGTG 58.841 47.619 0.00 0.00 0.00 3.21
2160 2317 0.539438 TGCTTGTCCATGGGGTGTTC 60.539 55.000 13.02 0.00 34.93 3.18
2173 2330 4.081972 CAGGTCCGATATAGCTATGCTTGT 60.082 45.833 16.77 0.00 40.44 3.16
2193 2350 0.530744 TAGCAAGACACTACGGCAGG 59.469 55.000 0.00 0.00 0.00 4.85
2211 2368 0.249531 TTCGTGCGTCTGCTGGTTTA 60.250 50.000 0.00 0.00 43.34 2.01
2237 2394 1.176619 TCTTCAGTTCGAGGACGGCA 61.177 55.000 0.00 0.00 40.21 5.69
2242 2399 2.612972 GGCAACATCTTCAGTTCGAGGA 60.613 50.000 0.00 0.00 33.68 3.71
2248 2405 1.425066 TCAGGGGCAACATCTTCAGTT 59.575 47.619 0.00 0.00 39.74 3.16
2258 2415 1.322442 GCCAGATAATCAGGGGCAAC 58.678 55.000 0.00 0.00 44.01 4.17
2269 2426 1.640593 TTCCCATGGCCGCCAGATAA 61.641 55.000 18.96 6.70 36.75 1.75
2273 2430 3.451894 GTTTCCCATGGCCGCCAG 61.452 66.667 18.96 9.80 36.75 4.85
2307 2464 2.931068 GCTTTTCCGGGCCAGGTTG 61.931 63.158 22.25 11.10 0.00 3.77
2309 2466 4.678743 GGCTTTTCCGGGCCAGGT 62.679 66.667 22.25 0.00 46.84 4.00
2318 2475 0.253327 AGGTCAGATCGGGCTTTTCC 59.747 55.000 0.00 0.00 0.00 3.13
2319 2476 1.373570 CAGGTCAGATCGGGCTTTTC 58.626 55.000 0.00 0.00 0.00 2.29
2320 2477 0.035056 CCAGGTCAGATCGGGCTTTT 60.035 55.000 0.00 0.00 0.00 2.27
2321 2478 1.604378 CCAGGTCAGATCGGGCTTT 59.396 57.895 0.00 0.00 0.00 3.51
2323 2480 3.474570 GCCAGGTCAGATCGGGCT 61.475 66.667 17.09 0.00 41.39 5.19
2324 2481 4.554036 GGCCAGGTCAGATCGGGC 62.554 72.222 16.17 16.17 43.86 6.13
2325 2482 2.765807 AGGCCAGGTCAGATCGGG 60.766 66.667 5.01 0.00 0.00 5.14
2326 2483 1.903877 AACAGGCCAGGTCAGATCGG 61.904 60.000 5.01 0.00 0.00 4.18
2328 2485 0.908198 AGAACAGGCCAGGTCAGATC 59.092 55.000 16.44 2.68 0.00 2.75
2329 2486 1.004044 CAAGAACAGGCCAGGTCAGAT 59.996 52.381 16.44 0.00 0.00 2.90
2330 2487 0.397941 CAAGAACAGGCCAGGTCAGA 59.602 55.000 16.44 0.00 0.00 3.27
2331 2488 0.109342 ACAAGAACAGGCCAGGTCAG 59.891 55.000 16.44 9.87 0.00 3.51
2332 2489 0.108585 GACAAGAACAGGCCAGGTCA 59.891 55.000 16.44 0.00 0.00 4.02
2333 2490 0.398318 AGACAAGAACAGGCCAGGTC 59.602 55.000 4.72 4.72 0.00 3.85
2334 2491 1.729586 TAGACAAGAACAGGCCAGGT 58.270 50.000 5.01 0.00 0.00 4.00
2335 2492 3.181461 CCTATAGACAAGAACAGGCCAGG 60.181 52.174 5.01 0.00 0.00 4.45
2336 2493 3.742640 GCCTATAGACAAGAACAGGCCAG 60.743 52.174 5.01 0.00 42.20 4.85
2337 2494 2.170607 GCCTATAGACAAGAACAGGCCA 59.829 50.000 5.01 0.00 42.20 5.36
2338 2495 2.839975 GCCTATAGACAAGAACAGGCC 58.160 52.381 0.00 0.00 42.20 5.19
2339 2496 2.170607 TGGCCTATAGACAAGAACAGGC 59.829 50.000 3.32 1.76 46.28 4.85
2340 2497 3.181461 CCTGGCCTATAGACAAGAACAGG 60.181 52.174 3.32 0.00 37.26 4.00
2341 2498 3.742640 GCCTGGCCTATAGACAAGAACAG 60.743 52.174 7.66 0.00 0.00 3.16
2342 2499 2.170607 GCCTGGCCTATAGACAAGAACA 59.829 50.000 7.66 0.00 0.00 3.18
2343 2500 2.485657 GGCCTGGCCTATAGACAAGAAC 60.486 54.545 30.42 0.00 46.69 3.01
2344 2501 1.768870 GGCCTGGCCTATAGACAAGAA 59.231 52.381 30.42 0.00 46.69 2.52
2345 2502 1.424638 GGCCTGGCCTATAGACAAGA 58.575 55.000 30.42 0.00 46.69 3.02
2362 2519 1.106285 CTCAAAACATAGGCCCAGGC 58.894 55.000 0.00 0.00 41.06 4.85
2397 2554 0.031817 AATATGCCAAGCCCAAGCCT 60.032 50.000 0.00 0.00 41.25 4.58
2398 2555 0.832626 AAATATGCCAAGCCCAAGCC 59.167 50.000 0.00 0.00 41.25 4.35
2418 2575 0.255033 GGGCCTCATCCCTAAAACGT 59.745 55.000 0.84 0.00 43.13 3.99
2441 2610 0.975887 GCCCATCAAAGGAAAAGCCA 59.024 50.000 0.00 0.00 40.02 4.75
2452 2621 2.615465 CCCAGGTCCAGCCCATCAA 61.615 63.158 0.00 0.00 38.26 2.57
2460 2629 0.394899 GATTTCAGGCCCAGGTCCAG 60.395 60.000 0.00 0.00 0.00 3.86
2464 2633 1.216990 CCTAGATTTCAGGCCCAGGT 58.783 55.000 0.00 0.00 0.00 4.00
2509 2678 2.762327 CGTAGTAGAAAACCTAGGCCCA 59.238 50.000 9.30 0.00 0.00 5.36
2510 2679 2.102084 CCGTAGTAGAAAACCTAGGCCC 59.898 54.545 9.30 0.00 0.00 5.80
2525 2694 3.638160 TCGGACATAATAAAGCCCGTAGT 59.362 43.478 0.00 0.00 38.25 2.73
2527 2696 3.243839 GGTCGGACATAATAAAGCCCGTA 60.244 47.826 10.76 0.00 38.25 4.02
2541 2710 0.535335 GCCATAAGTCAGGTCGGACA 59.465 55.000 10.76 0.00 40.29 4.02
2543 2712 0.616395 TGGCCATAAGTCAGGTCGGA 60.616 55.000 0.00 0.00 30.25 4.55
2550 2719 2.976882 GGGTATACCTGGCCATAAGTCA 59.023 50.000 21.25 0.00 35.85 3.41
2563 2732 3.385755 TCTTTTACTGCGAGGGGTATACC 59.614 47.826 13.99 13.99 39.11 2.73
2574 2743 2.808543 AGCTTCAGGTTCTTTTACTGCG 59.191 45.455 0.00 0.00 32.42 5.18
2575 2744 3.120511 CGAGCTTCAGGTTCTTTTACTGC 60.121 47.826 0.00 0.00 32.42 4.40
2577 2746 4.602340 TCGAGCTTCAGGTTCTTTTACT 57.398 40.909 0.00 0.00 0.00 2.24
2578 2747 4.093556 CCATCGAGCTTCAGGTTCTTTTAC 59.906 45.833 0.00 0.00 0.00 2.01
2582 2751 1.625818 ACCATCGAGCTTCAGGTTCTT 59.374 47.619 0.00 0.00 0.00 2.52
2630 2822 6.194967 TCATCTCATCCGGATAGCCTTATTA 58.805 40.000 18.63 0.00 0.00 0.98
2632 2824 4.614475 TCATCTCATCCGGATAGCCTTAT 58.386 43.478 18.63 2.48 0.00 1.73
2642 2834 1.537638 CGACCTACTCATCTCATCCGG 59.462 57.143 0.00 0.00 0.00 5.14
2647 2839 2.091830 ACCATCCGACCTACTCATCTCA 60.092 50.000 0.00 0.00 0.00 3.27
2648 2840 2.588620 ACCATCCGACCTACTCATCTC 58.411 52.381 0.00 0.00 0.00 2.75
2653 2845 2.361438 CCTGTTACCATCCGACCTACTC 59.639 54.545 0.00 0.00 0.00 2.59
2655 2847 2.361438 CTCCTGTTACCATCCGACCTAC 59.639 54.545 0.00 0.00 0.00 3.18
2660 2852 1.672854 CGCCTCCTGTTACCATCCGA 61.673 60.000 0.00 0.00 0.00 4.55
2673 2865 2.652590 TCTAGGTAAAGAGTCGCCTCC 58.347 52.381 0.00 0.00 38.58 4.30
2684 2876 6.779860 AGTCAAGAGCCAAAATCTAGGTAAA 58.220 36.000 0.00 0.00 0.00 2.01
2696 2888 1.295423 GCCCGTAGTCAAGAGCCAA 59.705 57.895 0.00 0.00 0.00 4.52
2697 2889 1.264749 ATGCCCGTAGTCAAGAGCCA 61.265 55.000 0.00 0.00 0.00 4.75
2710 2902 4.448210 ACCTTGTATACTTTGTATGCCCG 58.552 43.478 4.17 0.00 0.00 6.13
2791 2983 0.979187 TTGTAACTCTAGGGCCCCGG 60.979 60.000 21.43 12.22 0.00 5.73
2792 2984 0.464452 CTTGTAACTCTAGGGCCCCG 59.536 60.000 21.43 10.78 0.00 5.73
2817 3009 0.036105 TCCACCGACGTAGCAGACTA 60.036 55.000 0.00 0.00 0.00 2.59
2818 3010 1.303074 TCCACCGACGTAGCAGACT 60.303 57.895 0.00 0.00 0.00 3.24
2819 3011 1.136984 CTCCACCGACGTAGCAGAC 59.863 63.158 0.00 0.00 0.00 3.51
2820 3012 2.044555 CCTCCACCGACGTAGCAGA 61.045 63.158 0.00 0.00 0.00 4.26
2821 3013 2.490217 CCTCCACCGACGTAGCAG 59.510 66.667 0.00 0.00 0.00 4.24
2822 3014 3.066190 CCCTCCACCGACGTAGCA 61.066 66.667 0.00 0.00 0.00 3.49
2823 3015 3.834799 CCCCTCCACCGACGTAGC 61.835 72.222 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.