Multiple sequence alignment - TraesCS7A01G401600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G401600 chr7A 100.000 3131 0 0 1 3131 581041280 581038150 0.000000e+00 5782
1 TraesCS7A01G401600 chr7A 93.863 717 30 5 2253 2969 6880016 6880718 0.000000e+00 1068
2 TraesCS7A01G401600 chr3A 95.227 880 36 4 2253 3131 12963957 12963083 0.000000e+00 1387
3 TraesCS7A01G401600 chr6A 94.539 879 40 5 2254 3131 20198400 20199271 0.000000e+00 1351
4 TraesCS7A01G401600 chr6A 78.788 462 68 19 2669 3128 131172309 131172742 1.840000e-72 283
5 TraesCS7A01G401600 chr6A 81.102 254 36 9 2253 2500 146527334 146527087 3.190000e-45 193
6 TraesCS7A01G401600 chr4A 94.198 879 44 3 2253 3131 111059919 111060790 0.000000e+00 1334
7 TraesCS7A01G401600 chr7D 89.101 890 81 10 2250 3131 400297893 400298774 0.000000e+00 1092
8 TraesCS7A01G401600 chr7B 91.200 750 51 5 1454 2198 538574858 538574119 0.000000e+00 1005
9 TraesCS7A01G401600 chr7B 89.895 762 48 15 3 741 538577158 538576403 0.000000e+00 953
10 TraesCS7A01G401600 chr7B 96.800 125 4 0 1030 1154 538574999 538574875 3.160000e-50 209
11 TraesCS7A01G401600 chr1B 88.790 785 82 3 2283 3066 401321445 401320666 0.000000e+00 957
12 TraesCS7A01G401600 chr1B 82.308 260 35 8 2252 2507 401320226 401320478 6.800000e-52 215
13 TraesCS7A01G401600 chr5A 83.658 257 32 7 2253 2506 659434083 659434332 1.880000e-57 233
14 TraesCS7A01G401600 chr5A 84.615 221 32 2 1034 1253 407125075 407124856 5.260000e-53 219
15 TraesCS7A01G401600 chr3B 85.153 229 27 4 2253 2479 819779285 819779508 8.740000e-56 228
16 TraesCS7A01G401600 chr5D 81.712 257 40 4 1034 1285 313151614 313151360 1.140000e-49 207


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G401600 chr7A 581038150 581041280 3130 True 5782.000000 5782 100.000000 1 3131 1 chr7A.!!$R1 3130
1 TraesCS7A01G401600 chr7A 6880016 6880718 702 False 1068.000000 1068 93.863000 2253 2969 1 chr7A.!!$F1 716
2 TraesCS7A01G401600 chr3A 12963083 12963957 874 True 1387.000000 1387 95.227000 2253 3131 1 chr3A.!!$R1 878
3 TraesCS7A01G401600 chr6A 20198400 20199271 871 False 1351.000000 1351 94.539000 2254 3131 1 chr6A.!!$F1 877
4 TraesCS7A01G401600 chr4A 111059919 111060790 871 False 1334.000000 1334 94.198000 2253 3131 1 chr4A.!!$F1 878
5 TraesCS7A01G401600 chr7D 400297893 400298774 881 False 1092.000000 1092 89.101000 2250 3131 1 chr7D.!!$F1 881
6 TraesCS7A01G401600 chr7B 538574119 538577158 3039 True 722.333333 1005 92.631667 3 2198 3 chr7B.!!$R1 2195
7 TraesCS7A01G401600 chr1B 401320666 401321445 779 True 957.000000 957 88.790000 2283 3066 1 chr1B.!!$R1 783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.038526 TGGGAGAAAACTCGAGCGTC 60.039 55.0 13.61 7.42 0.00 5.19 F
1006 1065 0.172803 AACCACGTACGAGATGGAGC 59.827 55.0 25.14 0.00 36.94 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1184 2385 0.028374 GTTGTTGGTTCCGACGTTGG 59.972 55.0 16.4 16.4 0.0 3.77 R
2137 3341 0.108233 CCCGGTCAAAATGCCCAATG 60.108 55.0 0.0 0.0 0.0 2.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.607148 GTTGGGTTGGGAGAAAACTCG 59.393 52.381 0.00 0.00 30.14 4.18
37 38 0.038526 TGGGAGAAAACTCGAGCGTC 60.039 55.000 13.61 7.42 0.00 5.19
44 45 3.184581 AGAAAACTCGAGCGTCACAATTC 59.815 43.478 13.61 5.78 0.00 2.17
45 46 1.429463 AACTCGAGCGTCACAATTCC 58.571 50.000 13.61 0.00 0.00 3.01
51 52 1.442017 GCGTCACAATTCCGTTGGC 60.442 57.895 0.00 0.00 42.28 4.52
67 68 2.401583 TGGCGTTGTATGAGCAGAAT 57.598 45.000 0.00 0.00 0.00 2.40
86 87 0.532573 TTTTTCACCAGCCGTTGCAA 59.467 45.000 0.00 0.00 41.13 4.08
108 109 3.635373 AGGCAATTGTCCATCAAGCTATG 59.365 43.478 17.54 0.00 39.55 2.23
109 110 3.243636 GGCAATTGTCCATCAAGCTATGG 60.244 47.826 8.99 8.99 46.69 2.74
178 179 2.917971 GCAGTAGTAGAAGACGCTGTTG 59.082 50.000 0.00 0.00 37.87 3.33
274 275 2.103094 TCCTATGCCGTCAAGGAGATTG 59.897 50.000 0.00 0.00 45.00 2.67
283 284 2.996621 GTCAAGGAGATTGTCTTGGTCG 59.003 50.000 0.00 0.00 40.35 4.79
284 285 2.897326 TCAAGGAGATTGTCTTGGTCGA 59.103 45.455 0.00 0.00 40.35 4.20
285 286 2.996621 CAAGGAGATTGTCTTGGTCGAC 59.003 50.000 7.13 7.13 37.35 4.20
289 290 1.068474 GATTGTCTTGGTCGACGTGG 58.932 55.000 9.92 0.00 36.71 4.94
293 294 1.529948 TCTTGGTCGACGTGGAGGT 60.530 57.895 9.92 0.00 0.00 3.85
301 302 1.201647 TCGACGTGGAGGTGAATTCTC 59.798 52.381 7.05 2.70 0.00 2.87
302 303 1.202582 CGACGTGGAGGTGAATTCTCT 59.797 52.381 7.05 4.38 0.00 3.10
303 304 2.352814 CGACGTGGAGGTGAATTCTCTT 60.353 50.000 7.05 0.00 0.00 2.85
304 305 2.996621 GACGTGGAGGTGAATTCTCTTG 59.003 50.000 7.05 0.40 0.00 3.02
306 307 3.071023 ACGTGGAGGTGAATTCTCTTGAA 59.929 43.478 7.05 0.00 36.54 2.69
308 309 3.438434 GTGGAGGTGAATTCTCTTGAAGC 59.562 47.826 7.05 0.00 35.44 3.86
310 311 4.532126 TGGAGGTGAATTCTCTTGAAGCTA 59.468 41.667 7.05 0.00 35.44 3.32
457 458 4.832248 TCTTGGGTATGCTGTACAAGAAG 58.168 43.478 0.00 0.00 43.01 2.85
461 462 4.130118 GGGTATGCTGTACAAGAAGATGG 58.870 47.826 0.00 0.00 0.00 3.51
464 465 3.769739 TGCTGTACAAGAAGATGGTGT 57.230 42.857 0.00 0.00 0.00 4.16
466 467 3.070878 TGCTGTACAAGAAGATGGTGTCA 59.929 43.478 0.00 0.00 0.00 3.58
476 489 0.179171 GATGGTGTCATCGTCGTCGT 60.179 55.000 1.33 0.00 40.15 4.34
478 491 1.862147 GGTGTCATCGTCGTCGTCG 60.862 63.158 5.50 5.50 38.33 5.12
480 493 2.028733 TGTCATCGTCGTCGTCGGA 61.029 57.895 11.74 0.00 38.33 4.55
626 639 4.147322 CCGTGAACGCATCCGCAC 62.147 66.667 0.00 0.00 38.40 5.34
663 682 4.148645 GGCGTCGCTCCGAAAAGC 62.149 66.667 18.11 0.00 37.72 3.51
677 696 1.663135 GAAAAGCGCTTTTGTTGCCAA 59.337 42.857 43.36 0.00 42.26 4.52
678 697 1.731720 AAAGCGCTTTTGTTGCCAAA 58.268 40.000 29.11 0.00 38.77 3.28
679 698 1.731720 AAGCGCTTTTGTTGCCAAAA 58.268 40.000 18.98 1.68 45.76 2.44
701 723 2.047179 GTCCTTGTCGTGCCCTCC 60.047 66.667 0.00 0.00 0.00 4.30
705 727 0.537371 CCTTGTCGTGCCCTCCTTTT 60.537 55.000 0.00 0.00 0.00 2.27
706 728 1.318576 CTTGTCGTGCCCTCCTTTTT 58.681 50.000 0.00 0.00 0.00 1.94
707 729 1.266989 CTTGTCGTGCCCTCCTTTTTC 59.733 52.381 0.00 0.00 0.00 2.29
717 739 4.584743 TGCCCTCCTTTTTCTTTTCTCTTC 59.415 41.667 0.00 0.00 0.00 2.87
718 740 4.320567 GCCCTCCTTTTTCTTTTCTCTTCG 60.321 45.833 0.00 0.00 0.00 3.79
719 741 4.822350 CCCTCCTTTTTCTTTTCTCTTCGT 59.178 41.667 0.00 0.00 0.00 3.85
720 742 5.995897 CCCTCCTTTTTCTTTTCTCTTCGTA 59.004 40.000 0.00 0.00 0.00 3.43
741 763 1.999735 CGTGTTACAATCTGATGCCGT 59.000 47.619 0.00 0.00 0.00 5.68
742 764 3.183754 CGTGTTACAATCTGATGCCGTA 58.816 45.455 0.00 0.00 0.00 4.02
743 765 3.802139 CGTGTTACAATCTGATGCCGTAT 59.198 43.478 0.00 0.00 0.00 3.06
744 766 4.085055 CGTGTTACAATCTGATGCCGTATC 60.085 45.833 0.00 0.00 36.29 2.24
745 767 5.050490 GTGTTACAATCTGATGCCGTATCT 58.950 41.667 0.00 0.00 36.71 1.98
746 768 5.523916 GTGTTACAATCTGATGCCGTATCTT 59.476 40.000 0.00 0.00 36.71 2.40
747 769 6.037172 GTGTTACAATCTGATGCCGTATCTTT 59.963 38.462 0.00 0.00 36.71 2.52
748 770 6.037062 TGTTACAATCTGATGCCGTATCTTTG 59.963 38.462 0.00 2.97 36.71 2.77
749 771 4.517285 ACAATCTGATGCCGTATCTTTGT 58.483 39.130 0.00 3.49 36.71 2.83
750 772 5.670485 ACAATCTGATGCCGTATCTTTGTA 58.330 37.500 9.51 0.00 34.93 2.41
751 773 6.291377 ACAATCTGATGCCGTATCTTTGTAT 58.709 36.000 9.51 0.00 34.93 2.29
752 774 7.441836 ACAATCTGATGCCGTATCTTTGTATA 58.558 34.615 9.51 0.00 34.93 1.47
753 775 8.097038 ACAATCTGATGCCGTATCTTTGTATAT 58.903 33.333 9.51 0.00 34.93 0.86
754 776 9.586435 CAATCTGATGCCGTATCTTTGTATATA 57.414 33.333 0.00 0.00 36.71 0.86
759 781 9.797556 TGATGCCGTATCTTTGTATATATACAC 57.202 33.333 22.44 10.85 38.48 2.90
760 782 9.797556 GATGCCGTATCTTTGTATATATACACA 57.202 33.333 22.44 16.25 36.66 3.72
761 783 9.803315 ATGCCGTATCTTTGTATATATACACAG 57.197 33.333 24.18 24.18 42.48 3.66
762 784 7.758076 TGCCGTATCTTTGTATATATACACAGC 59.242 37.037 24.90 17.20 42.48 4.40
763 785 7.222224 GCCGTATCTTTGTATATATACACAGCC 59.778 40.741 24.90 16.93 42.48 4.85
764 786 7.431376 CCGTATCTTTGTATATATACACAGCCG 59.569 40.741 24.90 23.42 42.48 5.52
765 787 8.179615 CGTATCTTTGTATATATACACAGCCGA 58.820 37.037 24.90 16.73 42.48 5.54
766 788 9.850628 GTATCTTTGTATATATACACAGCCGAA 57.149 33.333 24.90 15.50 42.48 4.30
793 823 5.230942 ACCGATCAAACTGACTCTACTTTG 58.769 41.667 0.00 0.00 0.00 2.77
802 832 9.424319 CAAACTGACTCTACTTTGCTAATCTAA 57.576 33.333 0.00 0.00 0.00 2.10
805 835 9.810545 ACTGACTCTACTTTGCTAATCTAATTC 57.189 33.333 0.00 0.00 0.00 2.17
812 842 9.994432 CTACTTTGCTAATCTAATTCCAAACTG 57.006 33.333 0.00 0.00 0.00 3.16
813 843 7.830739 ACTTTGCTAATCTAATTCCAAACTGG 58.169 34.615 0.00 0.00 39.43 4.00
816 846 7.859325 TGCTAATCTAATTCCAAACTGGTAC 57.141 36.000 0.00 0.00 39.03 3.34
818 848 7.769044 TGCTAATCTAATTCCAAACTGGTACTC 59.231 37.037 0.00 0.00 39.03 2.59
821 851 7.989947 ATCTAATTCCAAACTGGTACTCCTA 57.010 36.000 0.00 0.00 39.03 2.94
826 856 3.170717 CCAAACTGGTACTCCTACTCCA 58.829 50.000 0.00 0.00 31.35 3.86
829 859 2.444421 ACTGGTACTCCTACTCCAACG 58.556 52.381 0.00 0.00 34.23 4.10
839 869 3.380637 TCCTACTCCAACGCTATCTTGAC 59.619 47.826 0.00 0.00 0.00 3.18
840 870 3.381908 CCTACTCCAACGCTATCTTGACT 59.618 47.826 0.00 0.00 0.00 3.41
841 871 4.579340 CCTACTCCAACGCTATCTTGACTA 59.421 45.833 0.00 0.00 0.00 2.59
842 872 4.640789 ACTCCAACGCTATCTTGACTAG 57.359 45.455 0.00 0.00 0.00 2.57
843 873 3.381908 ACTCCAACGCTATCTTGACTAGG 59.618 47.826 0.00 0.00 0.00 3.02
844 874 3.362706 TCCAACGCTATCTTGACTAGGT 58.637 45.455 0.00 0.00 0.00 3.08
845 875 3.380637 TCCAACGCTATCTTGACTAGGTC 59.619 47.826 0.00 0.00 0.00 3.85
846 876 3.130516 CCAACGCTATCTTGACTAGGTCA 59.869 47.826 0.00 0.00 41.09 4.02
847 877 4.106197 CAACGCTATCTTGACTAGGTCAC 58.894 47.826 0.00 0.00 42.60 3.67
848 878 2.355132 ACGCTATCTTGACTAGGTCACG 59.645 50.000 0.00 2.87 42.60 4.35
849 879 2.612672 CGCTATCTTGACTAGGTCACGA 59.387 50.000 8.80 8.80 42.60 4.35
851 881 4.451435 CGCTATCTTGACTAGGTCACGATA 59.549 45.833 18.77 18.77 45.32 2.92
852 882 5.049612 CGCTATCTTGACTAGGTCACGATAA 60.050 44.000 19.69 9.90 45.89 1.75
853 883 6.512903 CGCTATCTTGACTAGGTCACGATAAA 60.513 42.308 19.69 8.08 45.89 1.40
854 884 7.201145 GCTATCTTGACTAGGTCACGATAAAA 58.799 38.462 19.69 7.59 45.89 1.52
855 885 7.705325 GCTATCTTGACTAGGTCACGATAAAAA 59.295 37.037 19.69 7.35 45.89 1.94
873 903 3.947910 AAAAATCGGACACTACTCGGA 57.052 42.857 0.00 0.00 0.00 4.55
874 904 2.935481 AAATCGGACACTACTCGGAC 57.065 50.000 0.00 0.00 0.00 4.79
875 905 0.731417 AATCGGACACTACTCGGACG 59.269 55.000 0.00 0.00 0.00 4.79
876 906 1.712977 ATCGGACACTACTCGGACGC 61.713 60.000 0.00 0.00 0.00 5.19
877 907 2.396955 CGGACACTACTCGGACGCT 61.397 63.158 0.00 0.00 0.00 5.07
903 962 2.295349 TGACTAGGACACGACAAAGACC 59.705 50.000 0.00 0.00 0.00 3.85
916 975 9.798994 ACACGACAAAGACCTATTATTAAGTAG 57.201 33.333 0.00 0.00 0.00 2.57
917 976 8.753175 CACGACAAAGACCTATTATTAAGTAGC 58.247 37.037 0.00 0.00 0.00 3.58
918 977 8.472413 ACGACAAAGACCTATTATTAAGTAGCA 58.528 33.333 0.00 0.00 0.00 3.49
921 980 9.110502 ACAAAGACCTATTATTAAGTAGCAAGC 57.889 33.333 0.00 0.00 0.00 4.01
922 981 7.948278 AAGACCTATTATTAAGTAGCAAGCG 57.052 36.000 0.00 0.00 0.00 4.68
923 982 5.927115 AGACCTATTATTAAGTAGCAAGCGC 59.073 40.000 0.00 0.00 38.99 5.92
924 983 4.995487 ACCTATTATTAAGTAGCAAGCGCC 59.005 41.667 2.29 0.00 39.83 6.53
925 984 4.994852 CCTATTATTAAGTAGCAAGCGCCA 59.005 41.667 2.29 0.00 39.83 5.69
926 985 5.468746 CCTATTATTAAGTAGCAAGCGCCAA 59.531 40.000 2.29 0.00 39.83 4.52
927 986 4.875544 TTATTAAGTAGCAAGCGCCAAG 57.124 40.909 2.29 0.00 39.83 3.61
946 1005 2.879462 GCGACGCTAGTTCCACGG 60.879 66.667 13.73 0.00 0.00 4.94
947 1006 2.564975 CGACGCTAGTTCCACGGT 59.435 61.111 0.00 0.00 0.00 4.83
948 1007 1.800315 CGACGCTAGTTCCACGGTG 60.800 63.158 0.00 0.00 0.00 4.94
949 1008 2.048503 ACGCTAGTTCCACGGTGC 60.049 61.111 1.68 0.00 0.00 5.01
950 1009 3.179265 CGCTAGTTCCACGGTGCG 61.179 66.667 1.68 0.00 37.57 5.34
952 1011 3.179265 CTAGTTCCACGGTGCGCG 61.179 66.667 0.00 0.00 0.00 6.86
955 1014 2.495366 TAGTTCCACGGTGCGCGATT 62.495 55.000 12.10 0.00 0.00 3.34
956 1015 2.666862 TTCCACGGTGCGCGATTT 60.667 55.556 12.10 0.00 0.00 2.17
957 1016 2.255172 TTCCACGGTGCGCGATTTT 61.255 52.632 12.10 0.00 0.00 1.82
958 1017 2.177654 TTCCACGGTGCGCGATTTTC 62.178 55.000 12.10 0.00 0.00 2.29
959 1018 2.677003 CCACGGTGCGCGATTTTCT 61.677 57.895 12.10 0.00 0.00 2.52
961 1020 2.098298 CGGTGCGCGATTTTCTGG 59.902 61.111 12.10 0.00 0.00 3.86
963 1022 1.134694 GGTGCGCGATTTTCTGGTC 59.865 57.895 12.10 0.00 0.00 4.02
966 1025 1.134694 GCGCGATTTTCTGGTCCAC 59.865 57.895 12.10 0.00 0.00 4.02
967 1026 1.573829 GCGCGATTTTCTGGTCCACA 61.574 55.000 12.10 0.00 0.00 4.17
977 1036 0.976641 CTGGTCCACAGCTTACCTCA 59.023 55.000 6.02 0.00 40.97 3.86
978 1037 1.347707 CTGGTCCACAGCTTACCTCAA 59.652 52.381 6.02 0.00 40.97 3.02
979 1038 1.985159 TGGTCCACAGCTTACCTCAAT 59.015 47.619 6.02 0.00 34.23 2.57
981 1040 2.027192 GGTCCACAGCTTACCTCAATCA 60.027 50.000 0.00 0.00 0.00 2.57
982 1041 3.370953 GGTCCACAGCTTACCTCAATCAT 60.371 47.826 0.00 0.00 0.00 2.45
984 1043 3.519107 TCCACAGCTTACCTCAATCATCA 59.481 43.478 0.00 0.00 0.00 3.07
985 1044 4.164796 TCCACAGCTTACCTCAATCATCAT 59.835 41.667 0.00 0.00 0.00 2.45
986 1045 4.514441 CCACAGCTTACCTCAATCATCATC 59.486 45.833 0.00 0.00 0.00 2.92
987 1046 5.121105 CACAGCTTACCTCAATCATCATCA 58.879 41.667 0.00 0.00 0.00 3.07
988 1047 5.587443 CACAGCTTACCTCAATCATCATCAA 59.413 40.000 0.00 0.00 0.00 2.57
991 1050 4.883585 GCTTACCTCAATCATCATCAACCA 59.116 41.667 0.00 0.00 0.00 3.67
992 1051 5.220931 GCTTACCTCAATCATCATCAACCAC 60.221 44.000 0.00 0.00 0.00 4.16
993 1052 3.273434 ACCTCAATCATCATCAACCACG 58.727 45.455 0.00 0.00 0.00 4.94
994 1053 3.273434 CCTCAATCATCATCAACCACGT 58.727 45.455 0.00 0.00 0.00 4.49
995 1054 4.081142 ACCTCAATCATCATCAACCACGTA 60.081 41.667 0.00 0.00 0.00 3.57
998 1057 3.793797 ATCATCATCAACCACGTACGA 57.206 42.857 24.41 0.00 0.00 3.43
999 1058 3.145212 TCATCATCAACCACGTACGAG 57.855 47.619 24.41 14.76 0.00 4.18
1000 1059 2.750712 TCATCATCAACCACGTACGAGA 59.249 45.455 24.41 11.40 0.00 4.04
1001 1060 3.380320 TCATCATCAACCACGTACGAGAT 59.620 43.478 24.41 13.10 0.00 2.75
1002 1061 3.145212 TCATCAACCACGTACGAGATG 57.855 47.619 24.41 22.30 35.42 2.90
1003 1062 2.159296 TCATCAACCACGTACGAGATGG 60.159 50.000 24.41 21.11 39.57 3.51
1004 1063 1.536940 TCAACCACGTACGAGATGGA 58.463 50.000 25.14 5.20 36.94 3.41
1005 1064 1.471287 TCAACCACGTACGAGATGGAG 59.529 52.381 25.14 17.59 36.94 3.86
1006 1065 0.172803 AACCACGTACGAGATGGAGC 59.827 55.000 25.14 0.00 36.94 4.70
1007 1066 1.065928 CCACGTACGAGATGGAGCC 59.934 63.158 24.41 0.00 35.33 4.70
1011 1070 3.592814 TACGAGATGGAGCCGGCG 61.593 66.667 23.20 6.46 0.00 6.46
1013 1072 4.933064 CGAGATGGAGCCGGCGAC 62.933 72.222 23.20 18.71 0.00 5.19
1014 1073 3.838271 GAGATGGAGCCGGCGACA 61.838 66.667 24.64 24.64 0.00 4.35
1015 1074 3.157217 GAGATGGAGCCGGCGACAT 62.157 63.158 30.39 30.39 0.00 3.06
1017 1076 4.592192 ATGGAGCCGGCGACATCG 62.592 66.667 26.48 0.00 43.27 3.84
1043 2244 1.979693 GGGACTGCTGGTCGTCTCT 60.980 63.158 0.00 0.00 45.35 3.10
1079 2280 1.126846 CGTGCTGATTCTGAAACGTCC 59.873 52.381 0.00 0.00 0.00 4.79
1154 2355 4.525949 GTCGCCCTTCTACCCGGC 62.526 72.222 0.00 0.00 39.41 6.13
1157 2358 4.832608 GCCCTTCTACCCGGCGTG 62.833 72.222 6.01 0.00 31.92 5.34
1159 2360 3.072468 CCTTCTACCCGGCGTGGA 61.072 66.667 19.10 0.00 42.00 4.02
1160 2361 2.432300 CCTTCTACCCGGCGTGGAT 61.432 63.158 19.10 7.73 42.00 3.41
1162 2363 0.748450 CTTCTACCCGGCGTGGATAA 59.252 55.000 19.10 9.77 42.00 1.75
1163 2364 0.461135 TTCTACCCGGCGTGGATAAC 59.539 55.000 19.10 0.00 42.00 1.89
1164 2365 1.068585 CTACCCGGCGTGGATAACC 59.931 63.158 19.10 0.00 42.00 2.85
1165 2366 2.373434 CTACCCGGCGTGGATAACCC 62.373 65.000 19.10 0.00 42.00 4.11
1167 2368 4.903010 CCGGCGTGGATAACCCCG 62.903 72.222 6.01 0.00 42.00 5.73
1170 2371 2.588034 GCGTGGATAACCCCGCTC 60.588 66.667 11.52 0.00 45.17 5.03
1171 2372 2.108362 CGTGGATAACCCCGCTCC 59.892 66.667 0.00 0.00 34.65 4.70
1172 2373 2.432300 CGTGGATAACCCCGCTCCT 61.432 63.158 0.00 0.00 34.65 3.69
1173 2374 1.146263 GTGGATAACCCCGCTCCTG 59.854 63.158 0.00 0.00 34.02 3.86
1174 2375 2.111251 GGATAACCCCGCTCCTGC 59.889 66.667 0.00 0.00 0.00 4.85
1175 2376 2.444256 GGATAACCCCGCTCCTGCT 61.444 63.158 0.00 0.00 36.97 4.24
1176 2377 1.069935 GATAACCCCGCTCCTGCTC 59.930 63.158 0.00 0.00 36.97 4.26
1177 2378 1.686325 GATAACCCCGCTCCTGCTCA 61.686 60.000 0.00 0.00 36.97 4.26
1178 2379 1.690219 ATAACCCCGCTCCTGCTCAG 61.690 60.000 0.00 0.00 36.97 3.35
1181 2382 4.527583 CCCGCTCCTGCTCAGCTC 62.528 72.222 0.00 0.00 36.97 4.09
1182 2383 4.527583 CCGCTCCTGCTCAGCTCC 62.528 72.222 0.00 0.00 36.97 4.70
1183 2384 3.459965 CGCTCCTGCTCAGCTCCT 61.460 66.667 0.00 0.00 36.97 3.69
1184 2385 2.500646 GCTCCTGCTCAGCTCCTC 59.499 66.667 0.00 0.00 33.75 3.71
1185 2386 3.092780 GCTCCTGCTCAGCTCCTCC 62.093 68.421 0.00 0.00 33.75 4.30
1186 2387 1.685077 CTCCTGCTCAGCTCCTCCA 60.685 63.158 0.00 0.00 0.00 3.86
1187 2388 1.229304 TCCTGCTCAGCTCCTCCAA 60.229 57.895 0.00 0.00 0.00 3.53
1188 2389 1.078567 CCTGCTCAGCTCCTCCAAC 60.079 63.158 0.00 0.00 0.00 3.77
1189 2390 1.447489 CTGCTCAGCTCCTCCAACG 60.447 63.158 0.00 0.00 0.00 4.10
1190 2391 2.164865 CTGCTCAGCTCCTCCAACGT 62.165 60.000 0.00 0.00 0.00 3.99
1191 2392 1.446966 GCTCAGCTCCTCCAACGTC 60.447 63.158 0.00 0.00 0.00 4.34
1192 2393 1.153939 CTCAGCTCCTCCAACGTCG 60.154 63.158 0.00 0.00 0.00 5.12
1193 2394 2.125912 CAGCTCCTCCAACGTCGG 60.126 66.667 0.00 0.00 0.00 4.79
1194 2395 2.282958 AGCTCCTCCAACGTCGGA 60.283 61.111 0.00 0.00 0.00 4.55
1195 2396 1.906824 AGCTCCTCCAACGTCGGAA 60.907 57.895 0.00 0.00 33.65 4.30
1196 2397 1.737008 GCTCCTCCAACGTCGGAAC 60.737 63.158 0.00 0.00 33.65 3.62
1197 2398 1.080025 CTCCTCCAACGTCGGAACC 60.080 63.158 0.00 0.00 33.65 3.62
1198 2399 1.812686 CTCCTCCAACGTCGGAACCA 61.813 60.000 0.00 0.00 33.65 3.67
1199 2400 1.070105 CCTCCAACGTCGGAACCAA 59.930 57.895 0.00 0.00 33.65 3.67
1200 2401 1.226030 CCTCCAACGTCGGAACCAAC 61.226 60.000 0.00 0.00 33.65 3.77
1201 2402 0.531090 CTCCAACGTCGGAACCAACA 60.531 55.000 0.00 0.00 33.65 3.33
1202 2403 0.107800 TCCAACGTCGGAACCAACAA 60.108 50.000 0.00 0.00 29.93 2.83
1203 2404 0.028374 CCAACGTCGGAACCAACAAC 59.972 55.000 0.00 0.00 0.00 3.32
1204 2405 0.315544 CAACGTCGGAACCAACAACG 60.316 55.000 0.00 0.00 39.16 4.10
1205 2406 1.153588 ACGTCGGAACCAACAACGT 60.154 52.632 0.00 0.00 41.32 3.99
1206 2407 1.147557 ACGTCGGAACCAACAACGTC 61.148 55.000 0.00 0.00 42.34 4.34
1207 2408 1.824272 CGTCGGAACCAACAACGTCC 61.824 60.000 0.00 0.00 0.00 4.79
1208 2409 1.592131 TCGGAACCAACAACGTCCG 60.592 57.895 4.60 4.60 41.53 4.79
1209 2410 2.635338 GGAACCAACAACGTCCGC 59.365 61.111 0.00 0.00 0.00 5.54
1210 2411 1.890510 GGAACCAACAACGTCCGCT 60.891 57.895 0.00 0.00 0.00 5.52
1211 2412 0.600782 GGAACCAACAACGTCCGCTA 60.601 55.000 0.00 0.00 0.00 4.26
1212 2413 0.509929 GAACCAACAACGTCCGCTAC 59.490 55.000 0.00 0.00 0.00 3.58
1213 2414 0.105408 AACCAACAACGTCCGCTACT 59.895 50.000 0.00 0.00 0.00 2.57
1214 2415 0.961019 ACCAACAACGTCCGCTACTA 59.039 50.000 0.00 0.00 0.00 1.82
1215 2416 1.336240 ACCAACAACGTCCGCTACTAC 60.336 52.381 0.00 0.00 0.00 2.73
1216 2417 1.336148 CCAACAACGTCCGCTACTACA 60.336 52.381 0.00 0.00 0.00 2.74
1217 2418 1.983605 CAACAACGTCCGCTACTACAG 59.016 52.381 0.00 0.00 0.00 2.74
1230 2431 5.074584 GCTACTACAGCCCCTATTATCAC 57.925 47.826 0.00 0.00 45.23 3.06
1231 2432 4.527038 GCTACTACAGCCCCTATTATCACA 59.473 45.833 0.00 0.00 45.23 3.58
1232 2433 5.011738 GCTACTACAGCCCCTATTATCACAA 59.988 44.000 0.00 0.00 45.23 3.33
1233 2434 5.552870 ACTACAGCCCCTATTATCACAAG 57.447 43.478 0.00 0.00 0.00 3.16
1234 2435 5.216622 ACTACAGCCCCTATTATCACAAGA 58.783 41.667 0.00 0.00 0.00 3.02
1235 2436 5.665812 ACTACAGCCCCTATTATCACAAGAA 59.334 40.000 0.00 0.00 0.00 2.52
1236 2437 5.653255 ACAGCCCCTATTATCACAAGAAT 57.347 39.130 0.00 0.00 0.00 2.40
1237 2438 6.018433 ACAGCCCCTATTATCACAAGAATT 57.982 37.500 0.00 0.00 0.00 2.17
1238 2439 6.435164 ACAGCCCCTATTATCACAAGAATTT 58.565 36.000 0.00 0.00 0.00 1.82
1239 2440 6.547510 ACAGCCCCTATTATCACAAGAATTTC 59.452 38.462 0.00 0.00 0.00 2.17
1240 2441 5.765182 AGCCCCTATTATCACAAGAATTTCG 59.235 40.000 0.00 0.00 0.00 3.46
1241 2442 5.763204 GCCCCTATTATCACAAGAATTTCGA 59.237 40.000 0.00 0.00 0.00 3.71
1242 2443 6.073003 GCCCCTATTATCACAAGAATTTCGAG 60.073 42.308 0.00 0.00 0.00 4.04
1243 2444 6.428159 CCCCTATTATCACAAGAATTTCGAGG 59.572 42.308 0.00 0.00 0.00 4.63
1244 2445 6.992715 CCCTATTATCACAAGAATTTCGAGGT 59.007 38.462 0.00 0.00 0.00 3.85
1245 2446 7.499232 CCCTATTATCACAAGAATTTCGAGGTT 59.501 37.037 0.00 0.00 0.00 3.50
1246 2447 8.338259 CCTATTATCACAAGAATTTCGAGGTTG 58.662 37.037 0.00 0.00 0.00 3.77
1247 2448 3.896648 TCACAAGAATTTCGAGGTTGC 57.103 42.857 0.00 0.00 0.00 4.17
1248 2449 2.552315 TCACAAGAATTTCGAGGTTGCC 59.448 45.455 0.00 0.00 0.00 4.52
1249 2450 1.535462 ACAAGAATTTCGAGGTTGCCG 59.465 47.619 0.00 0.00 0.00 5.69
1250 2451 1.804151 CAAGAATTTCGAGGTTGCCGA 59.196 47.619 0.00 0.00 0.00 5.54
1251 2452 1.439679 AGAATTTCGAGGTTGCCGAC 58.560 50.000 0.00 0.00 35.61 4.79
1252 2453 1.153353 GAATTTCGAGGTTGCCGACA 58.847 50.000 0.00 0.00 35.61 4.35
1253 2454 1.533731 GAATTTCGAGGTTGCCGACAA 59.466 47.619 0.00 0.00 35.61 3.18
1260 2461 2.051345 GTTGCCGACAACGCCTTG 60.051 61.111 0.00 0.00 46.20 3.61
1261 2462 3.959975 TTGCCGACAACGCCTTGC 61.960 61.111 0.00 0.00 38.29 4.01
1311 2512 3.052082 CACCTGGCGCTGTTCCTG 61.052 66.667 7.64 0.00 0.00 3.86
1312 2513 4.335647 ACCTGGCGCTGTTCCTGG 62.336 66.667 7.64 6.15 45.15 4.45
1313 2514 4.020617 CCTGGCGCTGTTCCTGGA 62.021 66.667 7.64 0.00 43.13 3.86
1314 2515 2.743928 CTGGCGCTGTTCCTGGAC 60.744 66.667 7.64 0.00 0.00 4.02
1315 2516 4.680237 TGGCGCTGTTCCTGGACG 62.680 66.667 7.64 0.00 0.00 4.79
1316 2517 4.373116 GGCGCTGTTCCTGGACGA 62.373 66.667 7.64 0.00 0.00 4.20
1317 2518 3.112709 GCGCTGTTCCTGGACGAC 61.113 66.667 0.00 0.31 0.00 4.34
1318 2519 2.432628 CGCTGTTCCTGGACGACC 60.433 66.667 0.00 0.00 0.00 4.79
1319 2520 2.741092 GCTGTTCCTGGACGACCA 59.259 61.111 6.42 6.42 44.76 4.02
1320 2521 1.668151 GCTGTTCCTGGACGACCAC 60.668 63.158 1.37 0.00 41.77 4.16
1321 2522 1.004918 CTGTTCCTGGACGACCACC 60.005 63.158 1.37 0.00 41.77 4.61
1322 2523 2.048503 GTTCCTGGACGACCACCG 60.049 66.667 1.37 0.00 41.77 4.94
1323 2524 2.203523 TTCCTGGACGACCACCGA 60.204 61.111 1.37 0.00 41.77 4.69
1324 2525 1.833492 TTCCTGGACGACCACCGAA 60.833 57.895 1.37 5.13 41.77 4.30
1325 2526 1.189524 TTCCTGGACGACCACCGAAT 61.190 55.000 1.37 0.00 41.77 3.34
1326 2527 1.153628 CCTGGACGACCACCGAATC 60.154 63.158 1.37 0.00 41.77 2.52
1327 2528 1.153628 CTGGACGACCACCGAATCC 60.154 63.158 1.37 0.00 41.77 3.01
1328 2529 1.605058 CTGGACGACCACCGAATCCT 61.605 60.000 1.37 0.00 41.77 3.24
1329 2530 1.141234 GGACGACCACCGAATCCTC 59.859 63.158 0.00 0.00 41.76 3.71
1330 2531 1.226603 GACGACCACCGAATCCTCG 60.227 63.158 0.00 0.00 45.02 4.63
1341 2542 2.588027 GAATCCTCGACCTCCAACTC 57.412 55.000 0.00 0.00 0.00 3.01
1342 2543 1.825474 GAATCCTCGACCTCCAACTCA 59.175 52.381 0.00 0.00 0.00 3.41
1343 2544 1.187087 ATCCTCGACCTCCAACTCAC 58.813 55.000 0.00 0.00 0.00 3.51
1344 2545 1.213013 CCTCGACCTCCAACTCACG 59.787 63.158 0.00 0.00 0.00 4.35
1345 2546 1.241990 CCTCGACCTCCAACTCACGA 61.242 60.000 0.00 0.00 0.00 4.35
1346 2547 0.169230 CTCGACCTCCAACTCACGAG 59.831 60.000 0.00 0.00 40.39 4.18
1347 2548 1.444553 CGACCTCCAACTCACGAGC 60.445 63.158 0.00 0.00 0.00 5.03
1348 2549 1.444553 GACCTCCAACTCACGAGCG 60.445 63.158 0.00 0.00 0.00 5.03
1349 2550 2.125912 CCTCCAACTCACGAGCGG 60.126 66.667 0.00 0.00 0.00 5.52
1350 2551 2.651361 CTCCAACTCACGAGCGGT 59.349 61.111 0.00 0.00 0.00 5.68
1352 2553 3.414700 CCAACTCACGAGCGGTGC 61.415 66.667 0.00 0.00 46.56 5.01
1353 2554 3.414700 CAACTCACGAGCGGTGCC 61.415 66.667 0.00 0.00 46.56 5.01
1377 2578 3.567797 GAGCTGCCGCCGATTGAC 61.568 66.667 0.00 0.00 36.60 3.18
1380 2581 3.257561 CTGCCGCCGATTGACGAG 61.258 66.667 0.00 0.00 45.77 4.18
1381 2582 4.812476 TGCCGCCGATTGACGAGG 62.812 66.667 0.00 0.00 45.77 4.63
1385 2586 2.813908 GCCGATTGACGAGGCGTT 60.814 61.111 0.00 0.00 45.77 4.84
1386 2587 2.799540 GCCGATTGACGAGGCGTTC 61.800 63.158 0.00 0.00 45.77 3.95
1387 2588 1.445410 CCGATTGACGAGGCGTTCA 60.445 57.895 0.00 0.00 45.77 3.18
1388 2589 1.011968 CCGATTGACGAGGCGTTCAA 61.012 55.000 0.00 0.00 45.77 2.69
1389 2590 0.999406 CGATTGACGAGGCGTTCAAT 59.001 50.000 6.12 6.12 45.77 2.57
1390 2591 1.267038 CGATTGACGAGGCGTTCAATG 60.267 52.381 10.26 1.78 45.77 2.82
1391 2592 0.447801 ATTGACGAGGCGTTCAATGC 59.552 50.000 5.71 0.00 41.37 3.56
1399 2600 1.423845 GCGTTCAATGCCAGGTACG 59.576 57.895 0.00 0.00 0.00 3.67
1400 2601 1.017177 GCGTTCAATGCCAGGTACGA 61.017 55.000 0.00 0.00 0.00 3.43
1401 2602 0.719465 CGTTCAATGCCAGGTACGAC 59.281 55.000 0.00 0.00 0.00 4.34
1402 2603 1.671850 CGTTCAATGCCAGGTACGACT 60.672 52.381 0.00 0.00 0.00 4.18
1403 2604 2.423577 GTTCAATGCCAGGTACGACTT 58.576 47.619 0.00 0.00 0.00 3.01
1404 2605 2.380084 TCAATGCCAGGTACGACTTC 57.620 50.000 0.00 0.00 0.00 3.01
1405 2606 1.066430 TCAATGCCAGGTACGACTTCC 60.066 52.381 0.00 0.00 0.00 3.46
1406 2607 1.066143 CAATGCCAGGTACGACTTCCT 60.066 52.381 0.00 0.00 33.96 3.36
1407 2608 0.824759 ATGCCAGGTACGACTTCCTC 59.175 55.000 0.00 0.00 30.91 3.71
1416 2617 3.873828 CGACTTCCTCGTCTACGAC 57.126 57.895 0.14 0.00 44.22 4.34
1425 2626 2.277373 GTCTACGACGGCGAGCAG 60.277 66.667 22.49 11.90 41.64 4.24
1426 2627 2.435410 TCTACGACGGCGAGCAGA 60.435 61.111 22.49 14.39 41.64 4.26
1427 2628 2.277373 CTACGACGGCGAGCAGAC 60.277 66.667 22.49 0.00 41.64 3.51
1434 2635 3.999051 GGCGAGCAGACGATGTAC 58.001 61.111 0.00 0.00 35.09 2.90
1436 2637 2.568912 GCGAGCAGACGATGTACGC 61.569 63.158 15.93 15.93 46.94 4.42
1437 2638 1.939785 CGAGCAGACGATGTACGCC 60.940 63.158 0.00 0.00 46.94 5.68
1438 2639 1.939785 GAGCAGACGATGTACGCCG 60.940 63.158 5.35 5.35 46.94 6.46
1439 2640 2.202570 GCAGACGATGTACGCCGT 60.203 61.111 11.35 11.35 46.94 5.68
1440 2641 1.804326 GCAGACGATGTACGCCGTT 60.804 57.895 12.51 2.58 46.94 4.44
1441 2642 1.988409 CAGACGATGTACGCCGTTG 59.012 57.895 12.51 9.43 46.94 4.10
1442 2643 0.455464 CAGACGATGTACGCCGTTGA 60.455 55.000 12.51 0.00 46.94 3.18
1443 2644 0.455633 AGACGATGTACGCCGTTGAC 60.456 55.000 12.51 0.00 46.94 3.18
1444 2645 1.408474 GACGATGTACGCCGTTGACC 61.408 60.000 12.51 0.00 46.94 4.02
1445 2646 2.162754 CGATGTACGCCGTTGACCC 61.163 63.158 0.00 0.00 34.51 4.46
1446 2647 1.812507 GATGTACGCCGTTGACCCC 60.813 63.158 0.00 0.00 0.00 4.95
1447 2648 2.510064 GATGTACGCCGTTGACCCCA 62.510 60.000 0.00 0.00 0.00 4.96
1448 2649 2.030862 GTACGCCGTTGACCCCAA 59.969 61.111 0.00 0.00 0.00 4.12
1449 2650 2.030958 GTACGCCGTTGACCCCAAG 61.031 63.158 0.00 0.00 32.06 3.61
1450 2651 2.509651 TACGCCGTTGACCCCAAGT 61.510 57.895 0.00 0.00 32.06 3.16
1451 2652 1.184322 TACGCCGTTGACCCCAAGTA 61.184 55.000 0.00 0.00 32.06 2.24
1452 2653 2.030958 CGCCGTTGACCCCAAGTAC 61.031 63.158 0.00 0.00 32.06 2.73
1457 2658 0.535553 GTTGACCCCAAGTACGGCAA 60.536 55.000 0.00 0.00 32.06 4.52
1474 2675 3.958147 AAGGTGCAGATCGCCCGTG 62.958 63.158 7.00 0.00 46.60 4.94
1486 2687 0.596083 CGCCCGTGCAATCAAAAACA 60.596 50.000 0.00 0.00 37.32 2.83
1515 2716 0.909133 GGTGGGGTGATTGGGCAAAT 60.909 55.000 0.00 0.00 0.00 2.32
1518 2719 0.744281 GGGGTGATTGGGCAAATACG 59.256 55.000 0.00 0.00 0.00 3.06
1597 2798 3.649986 GCGGCGCCATGTACATCC 61.650 66.667 28.98 3.22 0.00 3.51
1612 2813 0.676736 CATCCTAGGAGAAGACGGGC 59.323 60.000 18.34 0.00 0.00 6.13
1643 2844 4.052229 CGACGAGGAAGGGCACGT 62.052 66.667 0.00 0.00 41.57 4.49
1656 2857 0.040067 GGCACGTTCAAAGCTTCCAG 60.040 55.000 0.00 0.00 0.00 3.86
1687 2888 4.148825 CCCTGAGCTTCGGGTCCG 62.149 72.222 12.01 2.52 41.42 4.79
1743 2947 2.513897 GGCGAGCTAATGGCCGTT 60.514 61.111 16.02 16.02 43.47 4.44
1749 2953 1.666189 GAGCTAATGGCCGTTCTGTTC 59.334 52.381 15.07 11.97 43.05 3.18
1750 2954 1.003118 AGCTAATGGCCGTTCTGTTCA 59.997 47.619 15.07 0.00 43.05 3.18
1755 2959 2.357034 GCCGTTCTGTTCAGCCGA 60.357 61.111 11.22 0.00 0.00 5.54
1758 2962 2.853914 GTTCTGTTCAGCCGACGC 59.146 61.111 0.00 0.00 0.00 5.19
1809 3013 3.257561 CGCGCGATGGAGTGGAAG 61.258 66.667 28.94 0.00 0.00 3.46
1820 3024 2.634940 TGGAGTGGAAGAAGGTTGAGAG 59.365 50.000 0.00 0.00 0.00 3.20
1836 3040 1.223211 GAGCCTTGAGGGAAGAGCC 59.777 63.158 0.00 0.00 37.23 4.70
1876 3080 1.630148 GACGATGGTGAAGAAGACCG 58.370 55.000 0.00 0.00 36.12 4.79
1908 3112 5.407387 GTGCATGCAGAACAAGATTTTCATT 59.593 36.000 23.41 0.00 0.00 2.57
1914 3118 5.106555 GCAGAACAAGATTTTCATTCCGAGA 60.107 40.000 0.00 0.00 0.00 4.04
1954 3158 6.456047 CGAGACTGTCCATGTTGATATTGTTG 60.456 42.308 3.76 0.00 0.00 3.33
1995 3199 0.392998 TCCTGCCGAAAGAAGGATGC 60.393 55.000 0.00 0.00 38.38 3.91
1997 3201 2.315038 CTGCCGAAAGAAGGATGCGC 62.315 60.000 0.00 0.00 0.00 6.09
2002 3206 0.449388 GAAAGAAGGATGCGCAGGTG 59.551 55.000 18.32 0.00 0.00 4.00
2015 3219 1.160137 GCAGGTGTTAAGACTGGCAG 58.840 55.000 14.16 14.16 32.98 4.85
2016 3220 1.543429 GCAGGTGTTAAGACTGGCAGT 60.543 52.381 22.26 22.26 32.98 4.40
2040 3244 1.160329 GCACGGGCATATGGTCTCAC 61.160 60.000 3.77 0.00 40.72 3.51
2041 3245 0.532862 CACGGGCATATGGTCTCACC 60.533 60.000 4.56 0.00 39.22 4.02
2067 3271 1.269257 GGACAACACCAAGAAGCAAGC 60.269 52.381 0.00 0.00 0.00 4.01
2070 3274 1.455383 AACACCAAGAAGCAAGCGGG 61.455 55.000 0.00 0.00 0.00 6.13
2072 3276 1.152756 ACCAAGAAGCAAGCGGGTT 60.153 52.632 0.00 0.00 40.61 4.11
2087 3291 0.038310 GGGTTTTGGGGGACAGAGAG 59.962 60.000 0.00 0.00 0.00 3.20
2122 3326 2.710377 TCTGGGTTGATTTCGATGGTG 58.290 47.619 0.00 0.00 0.00 4.17
2126 3330 2.354821 GGGTTGATTTCGATGGTGCTAC 59.645 50.000 0.00 0.00 0.00 3.58
2127 3331 3.270877 GGTTGATTTCGATGGTGCTACT 58.729 45.455 0.00 0.00 0.00 2.57
2128 3332 3.689649 GGTTGATTTCGATGGTGCTACTT 59.310 43.478 0.00 0.00 0.00 2.24
2129 3333 4.437390 GGTTGATTTCGATGGTGCTACTTG 60.437 45.833 0.00 0.00 0.00 3.16
2130 3334 4.200838 TGATTTCGATGGTGCTACTTGA 57.799 40.909 0.00 0.00 0.00 3.02
2131 3335 3.932710 TGATTTCGATGGTGCTACTTGAC 59.067 43.478 0.00 0.00 0.00 3.18
2132 3336 3.678056 TTTCGATGGTGCTACTTGACT 57.322 42.857 0.00 0.00 0.00 3.41
2133 3337 3.678056 TTCGATGGTGCTACTTGACTT 57.322 42.857 0.00 0.00 0.00 3.01
2134 3338 3.232213 TCGATGGTGCTACTTGACTTC 57.768 47.619 0.00 0.00 0.00 3.01
2135 3339 1.920574 CGATGGTGCTACTTGACTTCG 59.079 52.381 0.00 0.00 0.00 3.79
2137 3341 0.320421 TGGTGCTACTTGACTTCGCC 60.320 55.000 0.00 0.00 0.00 5.54
2168 3374 0.390603 TGACCGGGCGAATGTAACAG 60.391 55.000 6.32 0.00 0.00 3.16
2169 3375 1.702491 GACCGGGCGAATGTAACAGC 61.702 60.000 6.32 0.00 0.00 4.40
2170 3376 1.449601 CCGGGCGAATGTAACAGCT 60.450 57.895 0.00 0.00 0.00 4.24
2171 3377 0.179094 CCGGGCGAATGTAACAGCTA 60.179 55.000 0.00 0.00 0.00 3.32
2172 3378 1.647346 CGGGCGAATGTAACAGCTAA 58.353 50.000 0.00 0.00 0.00 3.09
2173 3379 1.326548 CGGGCGAATGTAACAGCTAAC 59.673 52.381 0.00 0.00 0.00 2.34
2174 3380 2.352388 GGGCGAATGTAACAGCTAACA 58.648 47.619 0.00 0.00 0.00 2.41
2175 3381 2.351726 GGGCGAATGTAACAGCTAACAG 59.648 50.000 0.00 0.00 0.00 3.16
2176 3382 2.351726 GGCGAATGTAACAGCTAACAGG 59.648 50.000 0.00 0.00 0.00 4.00
2177 3383 3.259064 GCGAATGTAACAGCTAACAGGA 58.741 45.455 0.00 0.00 0.00 3.86
2178 3384 3.682858 GCGAATGTAACAGCTAACAGGAA 59.317 43.478 0.00 0.00 0.00 3.36
2198 3404 2.191128 AGAACATGTTGACTGCCCTC 57.809 50.000 17.58 0.00 0.00 4.30
2199 3405 0.798776 GAACATGTTGACTGCCCTCG 59.201 55.000 17.58 0.00 0.00 4.63
2200 3406 0.606401 AACATGTTGACTGCCCTCGG 60.606 55.000 11.07 0.00 0.00 4.63
2210 3416 3.060866 GCCCTCGGCCCTACATAG 58.939 66.667 0.00 0.00 44.06 2.23
2211 3417 1.533273 GCCCTCGGCCCTACATAGA 60.533 63.158 0.00 0.00 44.06 1.98
2212 3418 1.536943 GCCCTCGGCCCTACATAGAG 61.537 65.000 0.00 0.00 44.06 2.43
2213 3419 0.900647 CCCTCGGCCCTACATAGAGG 60.901 65.000 12.34 12.34 45.90 3.69
2214 3420 1.536943 CCTCGGCCCTACATAGAGGC 61.537 65.000 7.55 8.95 46.37 4.70
2220 3426 3.492102 GCCCTACATAGAGGCAATTGA 57.508 47.619 10.34 0.00 46.34 2.57
2221 3427 3.142174 GCCCTACATAGAGGCAATTGAC 58.858 50.000 10.34 6.35 46.34 3.18
2222 3428 3.433598 GCCCTACATAGAGGCAATTGACA 60.434 47.826 15.18 0.00 46.34 3.58
2223 3429 4.780815 CCCTACATAGAGGCAATTGACAA 58.219 43.478 15.18 0.00 35.00 3.18
2224 3430 5.380043 CCCTACATAGAGGCAATTGACAAT 58.620 41.667 15.18 3.59 35.00 2.71
2225 3431 5.829924 CCCTACATAGAGGCAATTGACAATT 59.170 40.000 15.18 7.62 35.00 2.32
2226 3432 6.322201 CCCTACATAGAGGCAATTGACAATTT 59.678 38.462 15.18 0.00 35.00 1.82
2227 3433 7.147846 CCCTACATAGAGGCAATTGACAATTTT 60.148 37.037 15.18 0.00 35.00 1.82
2228 3434 7.917505 CCTACATAGAGGCAATTGACAATTTTC 59.082 37.037 15.18 1.27 0.00 2.29
2229 3435 7.472334 ACATAGAGGCAATTGACAATTTTCT 57.528 32.000 15.18 9.59 0.00 2.52
2230 3436 7.318141 ACATAGAGGCAATTGACAATTTTCTG 58.682 34.615 15.18 9.95 0.00 3.02
2231 3437 5.796424 AGAGGCAATTGACAATTTTCTGT 57.204 34.783 15.18 7.25 0.00 3.41
2232 3438 6.165700 AGAGGCAATTGACAATTTTCTGTT 57.834 33.333 15.18 0.00 0.00 3.16
2233 3439 5.987347 AGAGGCAATTGACAATTTTCTGTTG 59.013 36.000 15.18 1.23 0.00 3.33
2234 3440 5.916318 AGGCAATTGACAATTTTCTGTTGA 58.084 33.333 15.18 0.00 0.00 3.18
2235 3441 6.347696 AGGCAATTGACAATTTTCTGTTGAA 58.652 32.000 15.18 0.00 0.00 2.69
2236 3442 6.993902 AGGCAATTGACAATTTTCTGTTGAAT 59.006 30.769 15.18 0.00 31.56 2.57
2237 3443 8.149647 AGGCAATTGACAATTTTCTGTTGAATA 58.850 29.630 15.18 0.00 31.56 1.75
2238 3444 8.437742 GGCAATTGACAATTTTCTGTTGAATAG 58.562 33.333 10.34 0.00 31.56 1.73
2239 3445 8.981647 GCAATTGACAATTTTCTGTTGAATAGT 58.018 29.630 10.34 0.00 31.56 2.12
2243 3449 8.870160 TGACAATTTTCTGTTGAATAGTTTGG 57.130 30.769 0.00 0.00 31.56 3.28
2244 3450 8.690884 TGACAATTTTCTGTTGAATAGTTTGGA 58.309 29.630 0.00 0.00 31.56 3.53
2245 3451 9.696917 GACAATTTTCTGTTGAATAGTTTGGAT 57.303 29.630 0.00 0.00 31.56 3.41
2248 3454 7.945033 TTTTCTGTTGAATAGTTTGGATTGC 57.055 32.000 0.00 0.00 31.56 3.56
2251 3457 7.994425 TCTGTTGAATAGTTTGGATTGCTTA 57.006 32.000 0.00 0.00 0.00 3.09
2264 3470 6.194796 TGGATTGCTTAGAGTAAATTGCAC 57.805 37.500 0.00 0.00 0.00 4.57
2385 3594 0.179073 CAGATCGACGGATTGGGCTT 60.179 55.000 0.00 0.00 31.51 4.35
2413 3622 4.302067 AGTGAGATTATGACAGATGGGGT 58.698 43.478 0.00 0.00 0.00 4.95
2418 3628 4.728860 AGATTATGACAGATGGGGTCCTTT 59.271 41.667 0.00 0.00 34.36 3.11
2708 3924 2.282391 TGCTTGCTGCCGGAATGT 60.282 55.556 5.05 0.00 42.00 2.71
2818 4034 0.548031 ACCGGTGTAGGATCCGTCTA 59.452 55.000 6.12 0.00 44.51 2.59
2888 4110 2.155279 CGAGCCCGATCTAGATCTCAA 58.845 52.381 26.29 0.00 38.22 3.02
2890 4112 2.887783 GAGCCCGATCTAGATCTCAACA 59.112 50.000 26.29 0.00 35.72 3.33
2894 4116 3.551046 CCCGATCTAGATCTCAACAACGG 60.551 52.174 26.29 20.29 35.72 4.44
3019 4241 2.288666 GCCGAGCACATCTCCATTTAA 58.711 47.619 0.00 0.00 38.62 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 0.165944 CCAACGGAATTGTGACGCTC 59.834 55.000 0.00 0.00 36.47 5.03
37 38 0.030101 ACAACGCCAACGGAATTGTG 59.970 50.000 2.56 0.00 46.04 3.33
44 45 1.295357 TGCTCATACAACGCCAACGG 61.295 55.000 0.00 0.00 46.04 4.44
51 52 5.569059 GGTGAAAAATTCTGCTCATACAACG 59.431 40.000 0.00 0.00 0.00 4.10
67 68 0.532573 TTGCAACGGCTGGTGAAAAA 59.467 45.000 16.75 1.88 41.91 1.94
86 87 2.226962 AGCTTGATGGACAATTGCCT 57.773 45.000 16.52 5.83 37.88 4.75
133 134 4.162690 GTACCAGGAGGCAGCCGG 62.163 72.222 5.55 3.32 39.06 6.13
178 179 1.401199 GTGCTCCTACTAGACCGTGAC 59.599 57.143 0.00 0.00 0.00 3.67
241 242 1.227380 CATAGGAGACGGCAGGTGC 60.227 63.158 0.00 0.00 41.14 5.01
247 248 2.027751 GACGGCATAGGAGACGGC 59.972 66.667 0.00 0.00 0.00 5.68
250 251 1.112113 TCCTTGACGGCATAGGAGAC 58.888 55.000 15.60 0.00 33.23 3.36
274 275 1.080705 CCTCCACGTCGACCAAGAC 60.081 63.158 10.58 0.00 37.76 3.01
283 284 2.996621 CAAGAGAATTCACCTCCACGTC 59.003 50.000 8.44 0.00 0.00 4.34
284 285 2.632996 TCAAGAGAATTCACCTCCACGT 59.367 45.455 8.44 0.00 0.00 4.49
285 286 3.319137 TCAAGAGAATTCACCTCCACG 57.681 47.619 8.44 0.00 0.00 4.94
289 290 5.810074 GTCTAGCTTCAAGAGAATTCACCTC 59.190 44.000 8.44 0.00 32.31 3.85
293 294 4.462834 TCCGTCTAGCTTCAAGAGAATTCA 59.537 41.667 8.44 0.00 32.31 2.57
301 302 3.526931 TGGAATCCGTCTAGCTTCAAG 57.473 47.619 0.00 0.00 0.00 3.02
302 303 4.039245 CCTATGGAATCCGTCTAGCTTCAA 59.961 45.833 0.00 0.00 0.00 2.69
303 304 3.574396 CCTATGGAATCCGTCTAGCTTCA 59.426 47.826 0.00 0.00 0.00 3.02
304 305 3.827302 TCCTATGGAATCCGTCTAGCTTC 59.173 47.826 0.00 0.00 0.00 3.86
306 307 3.527507 TCCTATGGAATCCGTCTAGCT 57.472 47.619 0.00 0.00 0.00 3.32
308 309 4.021894 CACCTTCCTATGGAATCCGTCTAG 60.022 50.000 0.00 0.00 41.23 2.43
310 311 2.700897 CACCTTCCTATGGAATCCGTCT 59.299 50.000 0.00 0.00 41.23 4.18
409 410 1.986757 GCTGAGCAGGTCCAGGAGA 60.987 63.158 0.00 0.00 0.00 3.71
457 458 0.179171 ACGACGACGATGACACCATC 60.179 55.000 15.32 0.00 44.38 3.51
461 462 1.862147 CCGACGACGACGATGACAC 60.862 63.158 20.63 0.00 42.66 3.67
464 465 1.739196 AGTCCGACGACGACGATGA 60.739 57.895 20.63 7.83 44.28 2.92
466 467 2.747822 CCAGTCCGACGACGACGAT 61.748 63.158 20.63 4.00 44.28 3.73
499 512 1.705337 TTGCGCCGCTTCTGCTATTC 61.705 55.000 11.67 0.00 36.97 1.75
652 665 0.317854 ACAAAAGCGCTTTTCGGAGC 60.318 50.000 38.07 0.00 40.45 4.70
678 697 1.029681 GGCACGACAAGGACCTTTTT 58.970 50.000 3.21 0.00 0.00 1.94
679 698 0.822121 GGGCACGACAAGGACCTTTT 60.822 55.000 3.21 0.00 0.00 2.27
701 723 6.702897 ACACGTACGAAGAGAAAAGAAAAAG 58.297 36.000 24.41 0.00 0.00 2.27
705 727 6.264832 TGTAACACGTACGAAGAGAAAAGAA 58.735 36.000 24.41 0.00 35.23 2.52
706 728 5.820131 TGTAACACGTACGAAGAGAAAAGA 58.180 37.500 24.41 0.00 35.23 2.52
707 729 6.500775 TTGTAACACGTACGAAGAGAAAAG 57.499 37.500 24.41 2.52 35.23 2.27
717 739 3.000078 GGCATCAGATTGTAACACGTACG 60.000 47.826 15.01 15.01 35.23 3.67
718 740 3.000078 CGGCATCAGATTGTAACACGTAC 60.000 47.826 0.00 0.00 0.00 3.67
719 741 3.183754 CGGCATCAGATTGTAACACGTA 58.816 45.455 0.00 0.00 0.00 3.57
720 742 1.999735 CGGCATCAGATTGTAACACGT 59.000 47.619 0.00 0.00 0.00 4.49
741 763 9.850628 GTTCGGCTGTGTATATATACAAAGATA 57.149 33.333 33.55 20.38 46.76 1.98
742 764 7.817962 GGTTCGGCTGTGTATATATACAAAGAT 59.182 37.037 33.55 0.00 46.76 2.40
743 765 7.149973 GGTTCGGCTGTGTATATATACAAAGA 58.850 38.462 33.55 21.38 46.76 2.52
744 766 6.926826 TGGTTCGGCTGTGTATATATACAAAG 59.073 38.462 28.36 28.36 46.61 2.77
745 767 6.818233 TGGTTCGGCTGTGTATATATACAAA 58.182 36.000 23.88 18.83 44.11 2.83
746 768 6.408107 TGGTTCGGCTGTGTATATATACAA 57.592 37.500 23.88 14.42 44.11 2.41
747 769 6.218019 GTTGGTTCGGCTGTGTATATATACA 58.782 40.000 19.51 19.51 40.69 2.29
748 770 5.636543 GGTTGGTTCGGCTGTGTATATATAC 59.363 44.000 14.86 14.86 0.00 1.47
749 771 5.565242 CGGTTGGTTCGGCTGTGTATATATA 60.565 44.000 0.00 0.00 0.00 0.86
750 772 4.638304 GGTTGGTTCGGCTGTGTATATAT 58.362 43.478 0.00 0.00 0.00 0.86
751 773 3.491276 CGGTTGGTTCGGCTGTGTATATA 60.491 47.826 0.00 0.00 0.00 0.86
752 774 2.740580 CGGTTGGTTCGGCTGTGTATAT 60.741 50.000 0.00 0.00 0.00 0.86
753 775 1.404449 CGGTTGGTTCGGCTGTGTATA 60.404 52.381 0.00 0.00 0.00 1.47
754 776 0.672401 CGGTTGGTTCGGCTGTGTAT 60.672 55.000 0.00 0.00 0.00 2.29
755 777 1.301087 CGGTTGGTTCGGCTGTGTA 60.301 57.895 0.00 0.00 0.00 2.90
756 778 2.391724 ATCGGTTGGTTCGGCTGTGT 62.392 55.000 0.00 0.00 0.00 3.72
757 779 1.635663 GATCGGTTGGTTCGGCTGTG 61.636 60.000 0.00 0.00 0.00 3.66
758 780 1.375523 GATCGGTTGGTTCGGCTGT 60.376 57.895 0.00 0.00 0.00 4.40
759 781 0.953471 TTGATCGGTTGGTTCGGCTG 60.953 55.000 0.00 0.00 0.00 4.85
760 782 0.250553 TTTGATCGGTTGGTTCGGCT 60.251 50.000 0.00 0.00 0.00 5.52
761 783 0.109919 GTTTGATCGGTTGGTTCGGC 60.110 55.000 0.00 0.00 0.00 5.54
762 784 1.196808 CAGTTTGATCGGTTGGTTCGG 59.803 52.381 0.00 0.00 0.00 4.30
763 785 2.096417 GTCAGTTTGATCGGTTGGTTCG 60.096 50.000 0.00 0.00 0.00 3.95
764 786 3.139077 AGTCAGTTTGATCGGTTGGTTC 58.861 45.455 0.00 0.00 0.00 3.62
765 787 3.139077 GAGTCAGTTTGATCGGTTGGTT 58.861 45.455 0.00 0.00 0.00 3.67
766 788 2.368875 AGAGTCAGTTTGATCGGTTGGT 59.631 45.455 0.00 0.00 0.00 3.67
793 823 7.226918 GGAGTACCAGTTTGGAATTAGATTAGC 59.773 40.741 1.40 0.00 40.96 3.09
802 832 4.470304 GGAGTAGGAGTACCAGTTTGGAAT 59.530 45.833 1.40 0.00 40.96 3.01
805 835 3.170717 TGGAGTAGGAGTACCAGTTTGG 58.829 50.000 0.00 0.00 45.02 3.28
812 842 1.472188 AGCGTTGGAGTAGGAGTACC 58.528 55.000 0.00 0.00 0.00 3.34
813 843 4.136051 AGATAGCGTTGGAGTAGGAGTAC 58.864 47.826 0.00 0.00 0.00 2.73
816 846 3.632604 TCAAGATAGCGTTGGAGTAGGAG 59.367 47.826 0.00 0.00 0.00 3.69
818 848 3.381908 AGTCAAGATAGCGTTGGAGTAGG 59.618 47.826 0.00 0.00 0.00 3.18
821 851 3.381908 CCTAGTCAAGATAGCGTTGGAGT 59.618 47.826 0.00 0.00 0.00 3.85
826 856 3.181499 CGTGACCTAGTCAAGATAGCGTT 60.181 47.826 4.90 0.00 44.49 4.84
853 883 3.582780 GTCCGAGTAGTGTCCGATTTTT 58.417 45.455 0.00 0.00 0.00 1.94
854 884 2.415090 CGTCCGAGTAGTGTCCGATTTT 60.415 50.000 0.00 0.00 0.00 1.82
855 885 1.131883 CGTCCGAGTAGTGTCCGATTT 59.868 52.381 0.00 0.00 0.00 2.17
856 886 0.731417 CGTCCGAGTAGTGTCCGATT 59.269 55.000 0.00 0.00 0.00 3.34
857 887 1.712977 GCGTCCGAGTAGTGTCCGAT 61.713 60.000 0.00 0.00 0.00 4.18
858 888 2.393768 GCGTCCGAGTAGTGTCCGA 61.394 63.158 0.00 0.00 0.00 4.55
859 889 1.086067 TAGCGTCCGAGTAGTGTCCG 61.086 60.000 0.00 0.00 0.00 4.79
860 890 1.263752 GATAGCGTCCGAGTAGTGTCC 59.736 57.143 0.00 0.00 0.00 4.02
861 891 2.211806 AGATAGCGTCCGAGTAGTGTC 58.788 52.381 0.00 0.00 0.00 3.67
862 892 2.328819 AGATAGCGTCCGAGTAGTGT 57.671 50.000 0.00 0.00 0.00 3.55
863 893 2.612672 TCAAGATAGCGTCCGAGTAGTG 59.387 50.000 0.00 0.00 0.00 2.74
864 894 2.613133 GTCAAGATAGCGTCCGAGTAGT 59.387 50.000 0.00 0.00 0.00 2.73
865 895 2.873472 AGTCAAGATAGCGTCCGAGTAG 59.127 50.000 0.00 0.00 0.00 2.57
866 896 2.915349 AGTCAAGATAGCGTCCGAGTA 58.085 47.619 0.00 0.00 0.00 2.59
867 897 1.752683 AGTCAAGATAGCGTCCGAGT 58.247 50.000 0.00 0.00 0.00 4.18
868 898 2.224549 CCTAGTCAAGATAGCGTCCGAG 59.775 54.545 0.00 0.00 0.00 4.63
869 899 2.158856 TCCTAGTCAAGATAGCGTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
870 900 2.031857 GTCCTAGTCAAGATAGCGTCCG 60.032 54.545 0.00 0.00 0.00 4.79
871 901 2.950309 TGTCCTAGTCAAGATAGCGTCC 59.050 50.000 0.00 0.00 0.00 4.79
872 902 3.546417 CGTGTCCTAGTCAAGATAGCGTC 60.546 52.174 0.00 0.00 0.00 5.19
873 903 2.355132 CGTGTCCTAGTCAAGATAGCGT 59.645 50.000 0.00 0.00 0.00 5.07
874 904 2.612672 TCGTGTCCTAGTCAAGATAGCG 59.387 50.000 0.00 0.00 0.00 4.26
875 905 3.377485 TGTCGTGTCCTAGTCAAGATAGC 59.623 47.826 4.73 0.00 0.00 2.97
876 906 5.562506 TTGTCGTGTCCTAGTCAAGATAG 57.437 43.478 4.73 0.00 0.00 2.08
877 907 5.708697 TCTTTGTCGTGTCCTAGTCAAGATA 59.291 40.000 4.73 0.82 0.00 1.98
903 962 6.539649 TTGGCGCTTGCTACTTAATAATAG 57.460 37.500 7.64 0.00 39.13 1.73
928 987 3.238241 CGTGGAACTAGCGTCGCG 61.238 66.667 12.30 0.00 31.75 5.87
929 988 2.879462 CCGTGGAACTAGCGTCGC 60.879 66.667 9.80 9.80 31.75 5.19
930 989 1.800315 CACCGTGGAACTAGCGTCG 60.800 63.158 0.00 0.00 31.75 5.12
931 990 2.092882 GCACCGTGGAACTAGCGTC 61.093 63.158 0.00 0.00 31.75 5.19
933 992 3.179265 CGCACCGTGGAACTAGCG 61.179 66.667 0.00 0.00 41.04 4.26
934 993 3.488090 GCGCACCGTGGAACTAGC 61.488 66.667 0.30 0.00 31.75 3.42
935 994 2.884087 ATCGCGCACCGTGGAACTAG 62.884 60.000 8.75 0.00 37.97 2.57
936 995 2.495366 AATCGCGCACCGTGGAACTA 62.495 55.000 8.75 0.00 37.97 2.24
937 996 3.876589 AATCGCGCACCGTGGAACT 62.877 57.895 8.75 0.00 37.97 3.01
938 997 2.452366 AAAATCGCGCACCGTGGAAC 62.452 55.000 8.75 0.00 37.97 3.62
939 998 2.177654 GAAAATCGCGCACCGTGGAA 62.178 55.000 8.75 0.00 37.97 3.53
941 1000 2.202298 GAAAATCGCGCACCGTGG 60.202 61.111 8.75 0.00 37.97 4.94
942 1001 1.509787 CAGAAAATCGCGCACCGTG 60.510 57.895 8.75 0.00 38.82 4.94
943 1002 2.677003 CCAGAAAATCGCGCACCGT 61.677 57.895 8.75 0.00 38.35 4.83
944 1003 2.098298 CCAGAAAATCGCGCACCG 59.902 61.111 8.75 0.00 38.61 4.94
946 1005 1.134694 GGACCAGAAAATCGCGCAC 59.865 57.895 8.75 0.00 0.00 5.34
947 1006 1.302112 TGGACCAGAAAATCGCGCA 60.302 52.632 8.75 0.00 0.00 6.09
948 1007 1.134694 GTGGACCAGAAAATCGCGC 59.865 57.895 0.00 0.00 0.00 6.86
949 1008 0.443869 CTGTGGACCAGAAAATCGCG 59.556 55.000 0.00 0.00 44.49 5.87
950 1009 0.169009 GCTGTGGACCAGAAAATCGC 59.831 55.000 0.00 0.00 44.49 4.58
952 1011 3.440522 GGTAAGCTGTGGACCAGAAAATC 59.559 47.826 0.00 0.00 44.49 2.17
955 1014 2.038557 GAGGTAAGCTGTGGACCAGAAA 59.961 50.000 0.00 0.00 44.49 2.52
956 1015 1.623811 GAGGTAAGCTGTGGACCAGAA 59.376 52.381 0.00 0.00 44.49 3.02
957 1016 1.267121 GAGGTAAGCTGTGGACCAGA 58.733 55.000 0.00 0.00 44.49 3.86
958 1017 0.976641 TGAGGTAAGCTGTGGACCAG 59.023 55.000 0.00 0.00 44.53 4.00
959 1018 1.429930 TTGAGGTAAGCTGTGGACCA 58.570 50.000 9.34 0.00 35.56 4.02
961 1020 3.334583 TGATTGAGGTAAGCTGTGGAC 57.665 47.619 0.00 0.00 0.00 4.02
963 1022 3.877559 TGATGATTGAGGTAAGCTGTGG 58.122 45.455 0.00 0.00 0.00 4.17
966 1025 5.008415 GGTTGATGATGATTGAGGTAAGCTG 59.992 44.000 0.00 0.00 0.00 4.24
967 1026 5.128919 GGTTGATGATGATTGAGGTAAGCT 58.871 41.667 0.00 0.00 0.00 3.74
968 1027 4.883585 TGGTTGATGATGATTGAGGTAAGC 59.116 41.667 0.00 0.00 0.00 3.09
969 1028 5.007039 CGTGGTTGATGATGATTGAGGTAAG 59.993 44.000 0.00 0.00 0.00 2.34
970 1029 4.875536 CGTGGTTGATGATGATTGAGGTAA 59.124 41.667 0.00 0.00 0.00 2.85
971 1030 4.081142 ACGTGGTTGATGATGATTGAGGTA 60.081 41.667 0.00 0.00 0.00 3.08
972 1031 3.273434 CGTGGTTGATGATGATTGAGGT 58.727 45.455 0.00 0.00 0.00 3.85
973 1032 3.273434 ACGTGGTTGATGATGATTGAGG 58.727 45.455 0.00 0.00 0.00 3.86
974 1033 4.026558 CGTACGTGGTTGATGATGATTGAG 60.027 45.833 7.22 0.00 0.00 3.02
977 1036 4.112634 CTCGTACGTGGTTGATGATGATT 58.887 43.478 16.05 0.00 0.00 2.57
978 1037 3.380320 TCTCGTACGTGGTTGATGATGAT 59.620 43.478 16.05 0.00 0.00 2.45
979 1038 2.750712 TCTCGTACGTGGTTGATGATGA 59.249 45.455 16.05 0.00 0.00 2.92
981 1040 3.490933 CCATCTCGTACGTGGTTGATGAT 60.491 47.826 24.00 12.52 34.86 2.45
982 1041 2.159296 CCATCTCGTACGTGGTTGATGA 60.159 50.000 24.00 11.36 34.86 2.92
984 1043 2.097036 TCCATCTCGTACGTGGTTGAT 58.903 47.619 19.35 11.85 34.61 2.57
985 1044 1.471287 CTCCATCTCGTACGTGGTTGA 59.529 52.381 19.35 12.33 34.61 3.18
986 1045 1.909376 CTCCATCTCGTACGTGGTTG 58.091 55.000 19.35 15.23 34.61 3.77
987 1046 0.172803 GCTCCATCTCGTACGTGGTT 59.827 55.000 19.35 5.77 34.61 3.67
988 1047 1.664321 GGCTCCATCTCGTACGTGGT 61.664 60.000 19.35 10.02 34.61 4.16
991 1050 2.478890 CCGGCTCCATCTCGTACGT 61.479 63.158 16.05 0.00 0.00 3.57
992 1051 2.331805 CCGGCTCCATCTCGTACG 59.668 66.667 9.53 9.53 0.00 3.67
993 1052 2.027751 GCCGGCTCCATCTCGTAC 59.972 66.667 22.15 0.00 0.00 3.67
994 1053 3.592814 CGCCGGCTCCATCTCGTA 61.593 66.667 26.68 0.00 0.00 3.43
998 1057 3.157217 GATGTCGCCGGCTCCATCT 62.157 63.158 31.83 15.03 32.78 2.90
999 1058 2.663188 GATGTCGCCGGCTCCATC 60.663 66.667 28.32 28.32 0.00 3.51
1000 1059 4.592192 CGATGTCGCCGGCTCCAT 62.592 66.667 26.68 24.50 0.00 3.41
1011 1070 0.250513 AGTCCCCTTCTTGCGATGTC 59.749 55.000 0.00 0.00 0.00 3.06
1012 1071 0.036010 CAGTCCCCTTCTTGCGATGT 60.036 55.000 0.00 0.00 0.00 3.06
1013 1072 1.372087 GCAGTCCCCTTCTTGCGATG 61.372 60.000 0.00 0.00 0.00 3.84
1014 1073 1.078143 GCAGTCCCCTTCTTGCGAT 60.078 57.895 0.00 0.00 0.00 4.58
1015 1074 2.217038 AGCAGTCCCCTTCTTGCGA 61.217 57.895 0.00 0.00 0.00 5.10
1017 1076 1.676967 CCAGCAGTCCCCTTCTTGC 60.677 63.158 0.00 0.00 0.00 4.01
1019 1078 1.831652 CGACCAGCAGTCCCCTTCTT 61.832 60.000 1.71 0.00 43.08 2.52
1021 1080 2.266055 CGACCAGCAGTCCCCTTC 59.734 66.667 1.71 0.00 43.08 3.46
1022 1081 2.526873 ACGACCAGCAGTCCCCTT 60.527 61.111 0.00 0.00 43.08 3.95
1023 1082 2.997897 GACGACCAGCAGTCCCCT 60.998 66.667 0.00 0.00 43.08 4.79
1025 1084 1.939769 GAGAGACGACCAGCAGTCCC 61.940 65.000 0.00 0.00 43.08 4.46
1028 1087 1.979693 GGGAGAGACGACCAGCAGT 60.980 63.158 0.00 0.00 0.00 4.40
1156 2357 2.742116 GCAGGAGCGGGGTTATCCA 61.742 63.158 0.00 0.00 35.45 3.41
1157 2358 2.111251 GCAGGAGCGGGGTTATCC 59.889 66.667 0.00 0.00 0.00 2.59
1167 2368 2.500646 GAGGAGCTGAGCAGGAGC 59.499 66.667 7.39 0.00 42.56 4.70
1168 2369 1.263342 TTGGAGGAGCTGAGCAGGAG 61.263 60.000 7.39 0.00 0.00 3.69
1170 2371 1.078567 GTTGGAGGAGCTGAGCAGG 60.079 63.158 7.39 0.00 0.00 4.85
1171 2372 1.447489 CGTTGGAGGAGCTGAGCAG 60.447 63.158 7.39 0.00 0.00 4.24
1172 2373 2.159819 GACGTTGGAGGAGCTGAGCA 62.160 60.000 7.39 0.00 0.00 4.26
1173 2374 1.446966 GACGTTGGAGGAGCTGAGC 60.447 63.158 0.00 0.00 0.00 4.26
1174 2375 1.153939 CGACGTTGGAGGAGCTGAG 60.154 63.158 0.00 0.00 0.00 3.35
1175 2376 2.636412 CCGACGTTGGAGGAGCTGA 61.636 63.158 17.67 0.00 0.00 4.26
1176 2377 2.125912 CCGACGTTGGAGGAGCTG 60.126 66.667 17.67 0.00 0.00 4.24
1177 2378 1.906824 TTCCGACGTTGGAGGAGCT 60.907 57.895 23.53 0.00 39.72 4.09
1178 2379 1.737008 GTTCCGACGTTGGAGGAGC 60.737 63.158 23.53 11.99 39.72 4.70
1179 2380 1.080025 GGTTCCGACGTTGGAGGAG 60.080 63.158 23.53 0.00 39.72 3.69
1180 2381 1.401318 TTGGTTCCGACGTTGGAGGA 61.401 55.000 23.53 8.39 39.72 3.71
1181 2382 1.070105 TTGGTTCCGACGTTGGAGG 59.930 57.895 23.53 9.08 39.72 4.30
1182 2383 0.531090 TGTTGGTTCCGACGTTGGAG 60.531 55.000 23.53 0.00 39.72 3.86
1183 2384 0.107800 TTGTTGGTTCCGACGTTGGA 60.108 50.000 21.16 21.16 35.83 3.53
1184 2385 0.028374 GTTGTTGGTTCCGACGTTGG 59.972 55.000 16.40 16.40 0.00 3.77
1185 2386 0.315544 CGTTGTTGGTTCCGACGTTG 60.316 55.000 0.00 0.00 0.00 4.10
1186 2387 0.740516 ACGTTGTTGGTTCCGACGTT 60.741 50.000 0.00 0.00 43.53 3.99
1187 2388 1.153588 ACGTTGTTGGTTCCGACGT 60.154 52.632 0.00 0.00 41.53 4.34
1188 2389 1.561250 GACGTTGTTGGTTCCGACG 59.439 57.895 0.00 0.00 39.43 5.12
1189 2390 1.824272 CGGACGTTGTTGGTTCCGAC 61.824 60.000 2.69 2.46 42.63 4.79
1190 2391 1.592131 CGGACGTTGTTGGTTCCGA 60.592 57.895 2.69 0.00 42.63 4.55
1191 2392 2.932905 CGGACGTTGTTGGTTCCG 59.067 61.111 0.00 0.00 0.00 4.30
1192 2393 0.600782 TAGCGGACGTTGTTGGTTCC 60.601 55.000 0.00 0.00 0.00 3.62
1193 2394 0.509929 GTAGCGGACGTTGTTGGTTC 59.490 55.000 0.00 0.00 0.00 3.62
1194 2395 0.105408 AGTAGCGGACGTTGTTGGTT 59.895 50.000 0.00 0.00 0.00 3.67
1195 2396 0.961019 TAGTAGCGGACGTTGTTGGT 59.039 50.000 0.00 0.00 0.00 3.67
1196 2397 1.336148 TGTAGTAGCGGACGTTGTTGG 60.336 52.381 0.00 0.00 0.00 3.77
1197 2398 1.983605 CTGTAGTAGCGGACGTTGTTG 59.016 52.381 0.00 0.00 0.00 3.33
1198 2399 1.668047 GCTGTAGTAGCGGACGTTGTT 60.668 52.381 0.00 0.00 43.63 2.83
1199 2400 0.109412 GCTGTAGTAGCGGACGTTGT 60.109 55.000 0.00 0.00 43.63 3.32
1200 2401 2.650163 GCTGTAGTAGCGGACGTTG 58.350 57.895 0.00 0.00 43.63 4.10
1209 2410 6.493802 TCTTGTGATAATAGGGGCTGTAGTAG 59.506 42.308 0.00 0.00 0.00 2.57
1210 2411 6.378745 TCTTGTGATAATAGGGGCTGTAGTA 58.621 40.000 0.00 0.00 0.00 1.82
1211 2412 5.216622 TCTTGTGATAATAGGGGCTGTAGT 58.783 41.667 0.00 0.00 0.00 2.73
1212 2413 5.808366 TCTTGTGATAATAGGGGCTGTAG 57.192 43.478 0.00 0.00 0.00 2.74
1213 2414 6.763715 ATTCTTGTGATAATAGGGGCTGTA 57.236 37.500 0.00 0.00 0.00 2.74
1214 2415 5.653255 ATTCTTGTGATAATAGGGGCTGT 57.347 39.130 0.00 0.00 0.00 4.40
1215 2416 6.293626 CGAAATTCTTGTGATAATAGGGGCTG 60.294 42.308 0.00 0.00 0.00 4.85
1216 2417 5.765182 CGAAATTCTTGTGATAATAGGGGCT 59.235 40.000 0.00 0.00 0.00 5.19
1217 2418 5.763204 TCGAAATTCTTGTGATAATAGGGGC 59.237 40.000 0.00 0.00 0.00 5.80
1218 2419 6.428159 CCTCGAAATTCTTGTGATAATAGGGG 59.572 42.308 0.00 0.00 0.00 4.79
1219 2420 6.992715 ACCTCGAAATTCTTGTGATAATAGGG 59.007 38.462 0.00 0.00 0.00 3.53
1220 2421 8.338259 CAACCTCGAAATTCTTGTGATAATAGG 58.662 37.037 0.00 0.00 0.00 2.57
1221 2422 7.852945 GCAACCTCGAAATTCTTGTGATAATAG 59.147 37.037 0.00 0.00 0.00 1.73
1222 2423 7.201696 GGCAACCTCGAAATTCTTGTGATAATA 60.202 37.037 0.00 0.00 0.00 0.98
1223 2424 6.404734 GGCAACCTCGAAATTCTTGTGATAAT 60.405 38.462 0.00 0.00 0.00 1.28
1224 2425 5.106317 GGCAACCTCGAAATTCTTGTGATAA 60.106 40.000 0.00 0.00 0.00 1.75
1225 2426 4.394920 GGCAACCTCGAAATTCTTGTGATA 59.605 41.667 0.00 0.00 0.00 2.15
1226 2427 3.191371 GGCAACCTCGAAATTCTTGTGAT 59.809 43.478 0.00 0.00 0.00 3.06
1227 2428 2.552315 GGCAACCTCGAAATTCTTGTGA 59.448 45.455 0.00 0.00 0.00 3.58
1228 2429 2.665519 CGGCAACCTCGAAATTCTTGTG 60.666 50.000 0.00 0.00 0.00 3.33
1229 2430 1.535462 CGGCAACCTCGAAATTCTTGT 59.465 47.619 0.00 0.00 0.00 3.16
1230 2431 1.804151 TCGGCAACCTCGAAATTCTTG 59.196 47.619 0.00 0.00 33.42 3.02
1231 2432 1.804748 GTCGGCAACCTCGAAATTCTT 59.195 47.619 0.00 0.00 38.42 2.52
1232 2433 1.270625 TGTCGGCAACCTCGAAATTCT 60.271 47.619 0.00 0.00 38.42 2.40
1233 2434 1.153353 TGTCGGCAACCTCGAAATTC 58.847 50.000 0.00 0.00 38.42 2.17
1234 2435 1.265905 GTTGTCGGCAACCTCGAAATT 59.734 47.619 22.14 0.00 46.81 1.82
1235 2436 0.872388 GTTGTCGGCAACCTCGAAAT 59.128 50.000 22.14 0.00 46.81 2.17
1236 2437 2.313267 GTTGTCGGCAACCTCGAAA 58.687 52.632 22.14 0.00 46.81 3.46
1237 2438 4.036977 GTTGTCGGCAACCTCGAA 57.963 55.556 22.14 0.00 46.81 3.71
1295 2496 4.335647 CCAGGAACAGCGCCAGGT 62.336 66.667 2.29 0.00 0.00 4.00
1296 2497 4.020617 TCCAGGAACAGCGCCAGG 62.021 66.667 2.29 0.00 33.65 4.45
1297 2498 2.743928 GTCCAGGAACAGCGCCAG 60.744 66.667 2.29 0.00 0.00 4.85
1298 2499 4.680237 CGTCCAGGAACAGCGCCA 62.680 66.667 2.29 0.00 0.00 5.69
1299 2500 4.373116 TCGTCCAGGAACAGCGCC 62.373 66.667 2.29 0.00 0.00 6.53
1300 2501 3.112709 GTCGTCCAGGAACAGCGC 61.113 66.667 0.00 0.00 0.00 5.92
1301 2502 2.432628 GGTCGTCCAGGAACAGCG 60.433 66.667 0.00 0.00 0.00 5.18
1302 2503 1.668151 GTGGTCGTCCAGGAACAGC 60.668 63.158 0.19 0.00 45.24 4.40
1303 2504 1.004918 GGTGGTCGTCCAGGAACAG 60.005 63.158 0.19 0.00 45.24 3.16
1304 2505 2.863346 CGGTGGTCGTCCAGGAACA 61.863 63.158 0.19 0.00 45.24 3.18
1305 2506 2.048503 CGGTGGTCGTCCAGGAAC 60.049 66.667 0.19 0.00 45.24 3.62
1306 2507 1.189524 ATTCGGTGGTCGTCCAGGAA 61.190 55.000 14.39 14.39 45.24 3.36
1307 2508 1.601419 GATTCGGTGGTCGTCCAGGA 61.601 60.000 0.19 0.00 45.24 3.86
1308 2509 1.153628 GATTCGGTGGTCGTCCAGG 60.154 63.158 0.19 0.00 45.24 4.45
1309 2510 1.153628 GGATTCGGTGGTCGTCCAG 60.154 63.158 0.19 0.00 45.24 3.86
1310 2511 1.601419 GAGGATTCGGTGGTCGTCCA 61.601 60.000 0.00 0.00 42.05 4.02
1311 2512 1.141234 GAGGATTCGGTGGTCGTCC 59.859 63.158 0.00 0.00 40.32 4.79
1312 2513 1.226603 CGAGGATTCGGTGGTCGTC 60.227 63.158 0.00 0.00 43.05 4.20
1313 2514 1.676635 TCGAGGATTCGGTGGTCGT 60.677 57.895 0.00 0.00 46.67 4.34
1314 2515 1.226603 GTCGAGGATTCGGTGGTCG 60.227 63.158 0.00 0.00 46.67 4.79
1315 2516 1.141234 GGTCGAGGATTCGGTGGTC 59.859 63.158 0.00 0.00 46.67 4.02
1316 2517 1.305046 AGGTCGAGGATTCGGTGGT 60.305 57.895 0.00 0.00 46.67 4.16
1317 2518 1.437986 GAGGTCGAGGATTCGGTGG 59.562 63.158 0.00 0.00 46.67 4.61
1318 2519 1.320344 TGGAGGTCGAGGATTCGGTG 61.320 60.000 0.00 0.00 46.67 4.94
1319 2520 0.613853 TTGGAGGTCGAGGATTCGGT 60.614 55.000 0.00 0.00 46.67 4.69
1320 2521 0.179108 GTTGGAGGTCGAGGATTCGG 60.179 60.000 0.00 0.00 46.67 4.30
1322 2523 1.825474 TGAGTTGGAGGTCGAGGATTC 59.175 52.381 0.00 0.00 0.00 2.52
1323 2524 1.550976 GTGAGTTGGAGGTCGAGGATT 59.449 52.381 0.00 0.00 0.00 3.01
1324 2525 1.187087 GTGAGTTGGAGGTCGAGGAT 58.813 55.000 0.00 0.00 0.00 3.24
1325 2526 1.241990 CGTGAGTTGGAGGTCGAGGA 61.242 60.000 0.00 0.00 0.00 3.71
1326 2527 1.213013 CGTGAGTTGGAGGTCGAGG 59.787 63.158 0.00 0.00 0.00 4.63
1327 2528 0.169230 CTCGTGAGTTGGAGGTCGAG 59.831 60.000 0.00 0.00 38.63 4.04
1328 2529 1.863662 GCTCGTGAGTTGGAGGTCGA 61.864 60.000 0.00 0.00 0.00 4.20
1329 2530 1.444553 GCTCGTGAGTTGGAGGTCG 60.445 63.158 0.00 0.00 0.00 4.79
1330 2531 1.444553 CGCTCGTGAGTTGGAGGTC 60.445 63.158 0.00 0.00 0.00 3.85
1331 2532 2.651361 CGCTCGTGAGTTGGAGGT 59.349 61.111 0.00 0.00 0.00 3.85
1332 2533 2.125912 CCGCTCGTGAGTTGGAGG 60.126 66.667 4.82 0.00 0.00 4.30
1333 2534 1.734477 CACCGCTCGTGAGTTGGAG 60.734 63.158 14.53 5.63 46.20 3.86
1334 2535 2.338620 CACCGCTCGTGAGTTGGA 59.661 61.111 14.53 0.00 46.20 3.53
1335 2536 3.414700 GCACCGCTCGTGAGTTGG 61.415 66.667 5.07 8.23 46.20 3.77
1336 2537 3.414700 GGCACCGCTCGTGAGTTG 61.415 66.667 5.07 0.00 46.20 3.16
1360 2561 3.567797 GTCAATCGGCGGCAGCTC 61.568 66.667 10.53 0.00 44.37 4.09
1363 2564 3.257561 CTCGTCAATCGGCGGCAG 61.258 66.667 10.53 0.00 40.32 4.85
1364 2565 4.812476 CCTCGTCAATCGGCGGCA 62.812 66.667 10.53 0.00 40.32 5.69
1368 2569 2.799540 GAACGCCTCGTCAATCGGC 61.800 63.158 0.00 0.00 39.99 5.54
1369 2570 1.011968 TTGAACGCCTCGTCAATCGG 61.012 55.000 0.00 0.00 39.99 4.18
1370 2571 0.999406 ATTGAACGCCTCGTCAATCG 59.001 50.000 9.48 0.00 39.99 3.34
1371 2572 1.529826 GCATTGAACGCCTCGTCAATC 60.530 52.381 11.23 0.43 39.99 2.67
1372 2573 0.447801 GCATTGAACGCCTCGTCAAT 59.552 50.000 9.48 9.48 39.99 2.57
1373 2574 1.573829 GGCATTGAACGCCTCGTCAA 61.574 55.000 0.00 0.37 46.56 3.18
1374 2575 2.032634 GGCATTGAACGCCTCGTCA 61.033 57.895 0.00 0.00 46.56 4.35
1375 2576 2.785258 GGCATTGAACGCCTCGTC 59.215 61.111 0.00 0.00 46.56 4.20
1381 2582 1.017177 TCGTACCTGGCATTGAACGC 61.017 55.000 0.00 0.00 0.00 4.84
1382 2583 0.719465 GTCGTACCTGGCATTGAACG 59.281 55.000 0.00 0.00 0.00 3.95
1383 2584 2.094762 AGTCGTACCTGGCATTGAAC 57.905 50.000 0.00 0.00 0.00 3.18
1384 2585 2.614481 GGAAGTCGTACCTGGCATTGAA 60.614 50.000 0.00 0.00 0.00 2.69
1385 2586 1.066430 GGAAGTCGTACCTGGCATTGA 60.066 52.381 0.00 0.00 0.00 2.57
1386 2587 1.066143 AGGAAGTCGTACCTGGCATTG 60.066 52.381 0.00 0.00 34.99 2.82
1387 2588 1.207329 GAGGAAGTCGTACCTGGCATT 59.793 52.381 0.00 0.00 36.57 3.56
1388 2589 0.824759 GAGGAAGTCGTACCTGGCAT 59.175 55.000 0.00 0.00 36.57 4.40
1389 2590 1.592400 CGAGGAAGTCGTACCTGGCA 61.592 60.000 0.00 0.00 44.20 4.92
1390 2591 1.139095 CGAGGAAGTCGTACCTGGC 59.861 63.158 0.00 0.00 44.20 4.85
1409 2610 2.435410 TCTGCTCGCCGTCGTAGA 60.435 61.111 0.00 0.00 36.96 2.59
1410 2611 2.277373 GTCTGCTCGCCGTCGTAG 60.277 66.667 0.00 0.00 36.96 3.51
1411 2612 4.156622 CGTCTGCTCGCCGTCGTA 62.157 66.667 0.00 0.00 36.96 3.43
1413 2614 4.538283 ATCGTCTGCTCGCCGTCG 62.538 66.667 0.00 0.00 0.00 5.12
1414 2615 2.319011 TACATCGTCTGCTCGCCGTC 62.319 60.000 0.00 0.00 0.00 4.79
1415 2616 2.404186 TACATCGTCTGCTCGCCGT 61.404 57.895 0.00 0.00 0.00 5.68
1416 2617 1.939785 GTACATCGTCTGCTCGCCG 60.940 63.158 0.00 0.00 0.00 6.46
1417 2618 1.939785 CGTACATCGTCTGCTCGCC 60.940 63.158 0.00 0.00 34.52 5.54
1418 2619 2.568912 GCGTACATCGTCTGCTCGC 61.569 63.158 0.00 11.41 40.81 5.03
1419 2620 1.939785 GGCGTACATCGTCTGCTCG 60.940 63.158 0.00 0.00 41.33 5.03
1420 2621 1.939785 CGGCGTACATCGTCTGCTC 60.940 63.158 0.00 0.00 42.47 4.26
1421 2622 2.102357 CGGCGTACATCGTCTGCT 59.898 61.111 0.00 0.00 42.47 4.24
1422 2623 1.804326 AACGGCGTACATCGTCTGC 60.804 57.895 15.20 0.00 42.47 4.26
1423 2624 0.455464 TCAACGGCGTACATCGTCTG 60.455 55.000 15.20 5.20 42.47 3.51
1424 2625 0.455633 GTCAACGGCGTACATCGTCT 60.456 55.000 15.20 0.00 42.47 4.18
1425 2626 1.408474 GGTCAACGGCGTACATCGTC 61.408 60.000 15.20 0.00 42.13 4.20
1426 2627 1.444895 GGTCAACGGCGTACATCGT 60.445 57.895 15.20 4.89 42.13 3.73
1427 2628 2.162754 GGGTCAACGGCGTACATCG 61.163 63.158 15.20 0.00 43.12 3.84
1428 2629 1.812507 GGGGTCAACGGCGTACATC 60.813 63.158 15.20 2.35 0.00 3.06
1429 2630 2.114488 TTGGGGTCAACGGCGTACAT 62.114 55.000 15.20 0.00 0.00 2.29
1430 2631 2.718747 CTTGGGGTCAACGGCGTACA 62.719 60.000 15.20 0.00 0.00 2.90
1431 2632 2.030862 TTGGGGTCAACGGCGTAC 59.969 61.111 15.20 8.99 0.00 3.67
1432 2633 1.184322 TACTTGGGGTCAACGGCGTA 61.184 55.000 15.20 0.00 0.00 4.42
1433 2634 2.509651 TACTTGGGGTCAACGGCGT 61.510 57.895 6.77 6.77 0.00 5.68
1434 2635 2.030958 GTACTTGGGGTCAACGGCG 61.031 63.158 4.80 4.80 0.00 6.46
1435 2636 2.030958 CGTACTTGGGGTCAACGGC 61.031 63.158 0.00 0.00 0.00 5.68
1436 2637 1.375013 CCGTACTTGGGGTCAACGG 60.375 63.158 0.00 0.00 41.62 4.44
1437 2638 2.030958 GCCGTACTTGGGGTCAACG 61.031 63.158 0.00 0.00 31.82 4.10
1438 2639 0.535553 TTGCCGTACTTGGGGTCAAC 60.536 55.000 0.00 0.00 0.00 3.18
1439 2640 0.250553 CTTGCCGTACTTGGGGTCAA 60.251 55.000 0.00 0.00 0.00 3.18
1440 2641 1.373435 CTTGCCGTACTTGGGGTCA 59.627 57.895 0.00 0.00 0.00 4.02
1441 2642 1.376812 CCTTGCCGTACTTGGGGTC 60.377 63.158 0.00 0.00 0.00 4.46
1442 2643 2.151388 ACCTTGCCGTACTTGGGGT 61.151 57.895 0.00 0.00 0.00 4.95
1443 2644 1.674322 CACCTTGCCGTACTTGGGG 60.674 63.158 0.00 0.00 0.00 4.96
1444 2645 2.332654 GCACCTTGCCGTACTTGGG 61.333 63.158 0.00 0.00 37.42 4.12
1445 2646 1.577328 CTGCACCTTGCCGTACTTGG 61.577 60.000 0.00 0.00 44.23 3.61
1446 2647 0.602638 TCTGCACCTTGCCGTACTTG 60.603 55.000 0.00 0.00 44.23 3.16
1447 2648 0.324943 ATCTGCACCTTGCCGTACTT 59.675 50.000 0.00 0.00 44.23 2.24
1448 2649 0.108138 GATCTGCACCTTGCCGTACT 60.108 55.000 0.00 0.00 44.23 2.73
1449 2650 1.421410 CGATCTGCACCTTGCCGTAC 61.421 60.000 0.00 0.00 44.23 3.67
1450 2651 1.153647 CGATCTGCACCTTGCCGTA 60.154 57.895 0.00 0.00 44.23 4.02
1451 2652 2.434884 CGATCTGCACCTTGCCGT 60.435 61.111 0.00 0.00 44.23 5.68
1452 2653 3.869272 GCGATCTGCACCTTGCCG 61.869 66.667 4.93 0.00 44.23 5.69
1470 2671 2.189342 ACGTTGTTTTTGATTGCACGG 58.811 42.857 0.00 0.00 0.00 4.94
1474 2675 1.189227 GCCGACGTTGTTTTTGATTGC 59.811 47.619 1.30 0.00 0.00 3.56
1476 2677 1.598430 CCGCCGACGTTGTTTTTGATT 60.598 47.619 1.30 0.00 37.70 2.57
1515 2716 3.242543 GCTCGTCGAGATAAAACTCCGTA 60.243 47.826 26.11 0.00 33.83 4.02
1518 2719 2.159282 TGGCTCGTCGAGATAAAACTCC 60.159 50.000 26.11 14.29 33.83 3.85
1595 2796 1.453379 CGCCCGTCTTCTCCTAGGA 60.453 63.158 11.98 11.98 0.00 2.94
1596 2797 2.491022 CCGCCCGTCTTCTCCTAGG 61.491 68.421 0.82 0.82 0.00 3.02
1597 2798 3.121019 CCGCCCGTCTTCTCCTAG 58.879 66.667 0.00 0.00 0.00 3.02
1627 2828 1.737008 GAACGTGCCCTTCCTCGTC 60.737 63.158 0.00 0.00 35.49 4.20
1629 2830 0.882927 TTTGAACGTGCCCTTCCTCG 60.883 55.000 0.00 0.00 0.00 4.63
1643 2844 2.104111 TCGAGAACCTGGAAGCTTTGAA 59.896 45.455 0.00 0.00 0.00 2.69
1656 2857 1.219393 CAGGGGCTTCTCGAGAACC 59.781 63.158 23.74 25.14 0.00 3.62
1687 2888 2.160052 GGTACTTTTCTTCGCGTTCGTC 60.160 50.000 5.77 0.00 36.96 4.20
1693 2897 1.647702 GACGAGGTACTTTTCTTCGCG 59.352 52.381 0.00 0.00 41.55 5.87
1743 2947 4.717629 CCGCGTCGGCTGAACAGA 62.718 66.667 4.92 0.00 41.17 3.41
1770 2974 2.172659 TCGAGCTTGACGACGTCG 59.827 61.111 34.58 34.58 46.33 5.12
1795 2999 0.250513 ACCTTCTTCCACTCCATCGC 59.749 55.000 0.00 0.00 0.00 4.58
1809 3013 1.339535 CCCTCAAGGCTCTCAACCTTC 60.340 57.143 0.00 0.00 44.35 3.46
1820 3024 0.679321 CAAGGCTCTTCCCTCAAGGC 60.679 60.000 0.00 0.00 32.93 4.35
1836 3040 4.368808 CGCGTGCCGGTGAACAAG 62.369 66.667 1.90 0.00 0.00 3.16
1876 3080 1.198637 GTTCTGCATGCACTTGAGGTC 59.801 52.381 18.46 4.28 0.00 3.85
1908 3112 1.303799 GCCAGTCGTGTAGTCTCGGA 61.304 60.000 0.00 0.00 0.00 4.55
1914 3118 2.282674 TCGGGCCAGTCGTGTAGT 60.283 61.111 4.39 0.00 0.00 2.73
1954 3158 1.512310 CGAGTTCACCGTCTCGCTC 60.512 63.158 1.88 0.00 44.82 5.03
1995 3199 0.602638 TGCCAGTCTTAACACCTGCG 60.603 55.000 0.00 0.00 0.00 5.18
1997 3201 2.549754 CAACTGCCAGTCTTAACACCTG 59.450 50.000 0.00 0.00 0.00 4.00
2002 3206 1.266989 GCCACAACTGCCAGTCTTAAC 59.733 52.381 0.00 0.00 0.00 2.01
2015 3219 1.433064 CATATGCCCGTGCCACAAC 59.567 57.895 0.00 0.00 36.33 3.32
2016 3220 1.752310 CCATATGCCCGTGCCACAA 60.752 57.895 0.00 0.00 36.33 3.33
2040 3244 1.032014 CTTGGTGTTGTCCCAGTTGG 58.968 55.000 0.00 0.00 32.49 3.77
2041 3245 2.051334 TCTTGGTGTTGTCCCAGTTG 57.949 50.000 0.00 0.00 32.49 3.16
2044 3248 0.954452 GCTTCTTGGTGTTGTCCCAG 59.046 55.000 0.00 0.00 32.49 4.45
2067 3271 1.303317 CTCTGTCCCCCAAAACCCG 60.303 63.158 0.00 0.00 0.00 5.28
2070 3274 1.700186 AGTCTCTCTGTCCCCCAAAAC 59.300 52.381 0.00 0.00 0.00 2.43
2072 3276 2.382305 TCTAGTCTCTCTGTCCCCCAAA 59.618 50.000 0.00 0.00 0.00 3.28
2087 3291 9.523168 AATCAACCCAGATACTATAGTCTAGTC 57.477 37.037 9.12 4.26 0.00 2.59
2115 3319 1.920574 CGAAGTCAAGTAGCACCATCG 59.079 52.381 0.00 0.00 0.00 3.84
2137 3341 0.108233 CCCGGTCAAAATGCCCAATG 60.108 55.000 0.00 0.00 0.00 2.82
2168 3374 5.239525 AGTCAACATGTTCTTTCCTGTTAGC 59.760 40.000 8.48 0.00 31.01 3.09
2169 3375 6.662616 CAGTCAACATGTTCTTTCCTGTTAG 58.337 40.000 8.48 0.00 31.01 2.34
2170 3376 5.008613 GCAGTCAACATGTTCTTTCCTGTTA 59.991 40.000 8.48 0.00 31.01 2.41
2171 3377 4.202050 GCAGTCAACATGTTCTTTCCTGTT 60.202 41.667 8.48 0.00 32.27 3.16
2172 3378 3.316308 GCAGTCAACATGTTCTTTCCTGT 59.684 43.478 8.48 0.00 0.00 4.00
2173 3379 3.304928 GGCAGTCAACATGTTCTTTCCTG 60.305 47.826 8.48 10.79 0.00 3.86
2174 3380 2.887152 GGCAGTCAACATGTTCTTTCCT 59.113 45.455 8.48 0.00 0.00 3.36
2175 3381 2.029918 GGGCAGTCAACATGTTCTTTCC 60.030 50.000 8.48 7.33 0.00 3.13
2176 3382 2.887152 AGGGCAGTCAACATGTTCTTTC 59.113 45.455 8.48 0.00 0.00 2.62
2177 3383 2.887152 GAGGGCAGTCAACATGTTCTTT 59.113 45.455 8.48 0.00 0.00 2.52
2178 3384 2.508526 GAGGGCAGTCAACATGTTCTT 58.491 47.619 8.48 0.00 0.00 2.52
2198 3404 0.687354 ATTGCCTCTATGTAGGGCCG 59.313 55.000 0.00 0.00 44.71 6.13
2199 3405 2.106511 TCAATTGCCTCTATGTAGGGCC 59.893 50.000 0.00 0.00 44.71 5.80
2200 3406 3.142174 GTCAATTGCCTCTATGTAGGGC 58.858 50.000 0.00 10.69 45.45 5.19
2201 3407 4.422073 TGTCAATTGCCTCTATGTAGGG 57.578 45.455 0.00 0.00 37.11 3.53
2202 3408 6.949352 AATTGTCAATTGCCTCTATGTAGG 57.051 37.500 10.05 0.00 39.87 3.18
2203 3409 8.680903 AGAAAATTGTCAATTGCCTCTATGTAG 58.319 33.333 11.54 0.00 0.00 2.74
2204 3410 8.461222 CAGAAAATTGTCAATTGCCTCTATGTA 58.539 33.333 11.54 0.00 0.00 2.29
2205 3411 7.039504 ACAGAAAATTGTCAATTGCCTCTATGT 60.040 33.333 11.54 7.40 0.00 2.29
2206 3412 7.318141 ACAGAAAATTGTCAATTGCCTCTATG 58.682 34.615 11.54 6.88 0.00 2.23
2207 3413 7.472334 ACAGAAAATTGTCAATTGCCTCTAT 57.528 32.000 11.54 1.78 0.00 1.98
2208 3414 6.899393 ACAGAAAATTGTCAATTGCCTCTA 57.101 33.333 11.54 0.00 0.00 2.43
2209 3415 5.796424 ACAGAAAATTGTCAATTGCCTCT 57.204 34.783 11.54 10.68 0.00 3.69
2210 3416 5.984926 TCAACAGAAAATTGTCAATTGCCTC 59.015 36.000 11.54 8.82 0.00 4.70
2211 3417 5.916318 TCAACAGAAAATTGTCAATTGCCT 58.084 33.333 11.54 8.77 0.00 4.75
2212 3418 6.601741 TTCAACAGAAAATTGTCAATTGCC 57.398 33.333 11.54 6.79 0.00 4.52
2213 3419 8.981647 ACTATTCAACAGAAAATTGTCAATTGC 58.018 29.630 11.54 7.32 0.00 3.56
2217 3423 9.311916 CCAAACTATTCAACAGAAAATTGTCAA 57.688 29.630 0.00 0.00 0.00 3.18
2218 3424 8.690884 TCCAAACTATTCAACAGAAAATTGTCA 58.309 29.630 0.00 0.00 0.00 3.58
2219 3425 9.696917 ATCCAAACTATTCAACAGAAAATTGTC 57.303 29.630 0.00 0.00 0.00 3.18
2222 3428 8.992073 GCAATCCAAACTATTCAACAGAAAATT 58.008 29.630 0.00 0.00 0.00 1.82
2223 3429 8.370182 AGCAATCCAAACTATTCAACAGAAAAT 58.630 29.630 0.00 0.00 0.00 1.82
2224 3430 7.725251 AGCAATCCAAACTATTCAACAGAAAA 58.275 30.769 0.00 0.00 0.00 2.29
2225 3431 7.288810 AGCAATCCAAACTATTCAACAGAAA 57.711 32.000 0.00 0.00 0.00 2.52
2226 3432 6.899393 AGCAATCCAAACTATTCAACAGAA 57.101 33.333 0.00 0.00 0.00 3.02
2227 3433 6.899393 AAGCAATCCAAACTATTCAACAGA 57.101 33.333 0.00 0.00 0.00 3.41
2228 3434 8.044060 TCTAAGCAATCCAAACTATTCAACAG 57.956 34.615 0.00 0.00 0.00 3.16
2229 3435 7.665559 ACTCTAAGCAATCCAAACTATTCAACA 59.334 33.333 0.00 0.00 0.00 3.33
2230 3436 8.045176 ACTCTAAGCAATCCAAACTATTCAAC 57.955 34.615 0.00 0.00 0.00 3.18
2231 3437 9.733556 TTACTCTAAGCAATCCAAACTATTCAA 57.266 29.630 0.00 0.00 0.00 2.69
2232 3438 9.733556 TTTACTCTAAGCAATCCAAACTATTCA 57.266 29.630 0.00 0.00 0.00 2.57
2236 3442 8.458843 GCAATTTACTCTAAGCAATCCAAACTA 58.541 33.333 0.00 0.00 0.00 2.24
2237 3443 7.039784 TGCAATTTACTCTAAGCAATCCAAACT 60.040 33.333 0.00 0.00 0.00 2.66
2238 3444 7.062255 GTGCAATTTACTCTAAGCAATCCAAAC 59.938 37.037 0.00 0.00 33.37 2.93
2239 3445 7.090173 GTGCAATTTACTCTAAGCAATCCAAA 58.910 34.615 0.00 0.00 33.37 3.28
2240 3446 6.208402 TGTGCAATTTACTCTAAGCAATCCAA 59.792 34.615 0.00 0.00 33.37 3.53
2241 3447 5.709631 TGTGCAATTTACTCTAAGCAATCCA 59.290 36.000 0.00 0.00 33.37 3.41
2242 3448 6.194796 TGTGCAATTTACTCTAAGCAATCC 57.805 37.500 0.00 0.00 33.37 3.01
2243 3449 8.427774 GTTTTGTGCAATTTACTCTAAGCAATC 58.572 33.333 0.00 0.00 33.37 2.67
2244 3450 7.384932 GGTTTTGTGCAATTTACTCTAAGCAAT 59.615 33.333 0.00 0.00 33.37 3.56
2245 3451 6.699642 GGTTTTGTGCAATTTACTCTAAGCAA 59.300 34.615 0.00 0.00 33.37 3.91
2246 3452 6.183360 TGGTTTTGTGCAATTTACTCTAAGCA 60.183 34.615 0.00 0.00 0.00 3.91
2247 3453 6.212955 TGGTTTTGTGCAATTTACTCTAAGC 58.787 36.000 0.00 0.00 0.00 3.09
2248 3454 8.081633 TGATGGTTTTGTGCAATTTACTCTAAG 58.918 33.333 0.00 0.00 0.00 2.18
2251 3457 6.040842 AGTGATGGTTTTGTGCAATTTACTCT 59.959 34.615 0.00 0.00 0.00 3.24
2264 3470 2.364970 TGCCCTCAAAGTGATGGTTTTG 59.635 45.455 2.18 0.00 35.03 2.44
2321 3529 2.088423 AGACACGGTGTTTTCTGCAAA 58.912 42.857 15.94 0.00 0.00 3.68
2322 3530 1.745232 AGACACGGTGTTTTCTGCAA 58.255 45.000 15.94 0.00 0.00 4.08
2323 3531 1.668751 GAAGACACGGTGTTTTCTGCA 59.331 47.619 27.68 0.00 38.15 4.41
2367 3576 1.341531 CTAAGCCCAATCCGTCGATCT 59.658 52.381 0.00 0.00 0.00 2.75
2373 3582 3.709653 TCACTTATCTAAGCCCAATCCGT 59.290 43.478 0.00 0.00 36.79 4.69
2385 3594 9.029368 CCCATCTGTCATAATCTCACTTATCTA 57.971 37.037 0.00 0.00 0.00 1.98
2471 3682 6.209589 TGTGTAAAATTGCATGGGCTACTTTA 59.790 34.615 0.00 0.00 41.91 1.85
2683 3899 2.908940 GCAGCAAGCACCACCAGT 60.909 61.111 0.00 0.00 44.79 4.00
2708 3924 1.739929 CGATGCAAGGCACGTACCA 60.740 57.895 7.75 0.00 43.04 3.25
2849 4065 2.637383 GCCCAGTCGTCGTCCTCTT 61.637 63.158 0.00 0.00 0.00 2.85
3019 4241 2.821366 CATTGGAAGGCGCGCTCT 60.821 61.111 32.29 22.91 0.00 4.09
3104 4326 1.153549 GAGAAGCTTCCGGCATCGT 60.154 57.895 22.81 1.20 42.68 3.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.