Multiple sequence alignment - TraesCS7A01G400100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G400100 chr7A 100.000 3578 0 0 1 3578 580223976 580227553 0.000000e+00 6608.0
1 TraesCS7A01G400100 chr7A 99.643 280 1 0 3066 3345 460109412 460109691 2.460000e-141 512.0
2 TraesCS7A01G400100 chr7D 93.066 2668 115 36 360 3003 509534501 509531880 0.000000e+00 3838.0
3 TraesCS7A01G400100 chr7D 94.144 222 11 2 3359 3578 412853685 412853464 1.590000e-88 337.0
4 TraesCS7A01G400100 chr7D 93.370 181 6 5 1 176 509534898 509534719 2.740000e-66 263.0
5 TraesCS7A01G400100 chr7D 95.238 63 3 0 176 238 509534688 509534626 2.270000e-17 100.0
6 TraesCS7A01G400100 chr7D 94.000 50 3 0 3000 3049 509530970 509530921 3.830000e-10 76.8
7 TraesCS7A01G400100 chr7B 91.657 2541 119 32 515 3039 537517781 537515318 0.000000e+00 3432.0
8 TraesCS7A01G400100 chr7B 98.726 314 3 1 3050 3362 388157468 388157155 1.120000e-154 556.0
9 TraesCS7A01G400100 chr7B 87.247 494 14 8 13 480 537518253 537517783 5.300000e-143 518.0
10 TraesCS7A01G400100 chr4D 80.860 1489 258 20 1076 2554 78779700 78781171 0.000000e+00 1146.0
11 TraesCS7A01G400100 chr4D 77.922 1078 164 40 1487 2553 503606900 503607914 3.950000e-169 604.0
12 TraesCS7A01G400100 chr4A 80.378 1483 273 17 1076 2554 507592638 507594106 0.000000e+00 1110.0
13 TraesCS7A01G400100 chr4B 80.118 1519 267 26 1047 2554 110228800 110230294 0.000000e+00 1099.0
14 TraesCS7A01G400100 chr4B 79.973 1488 248 28 1090 2560 667426663 667428117 0.000000e+00 1051.0
15 TraesCS7A01G400100 chr4B 99.286 280 2 0 3065 3344 168154498 168154777 1.150000e-139 507.0
16 TraesCS7A01G400100 chr4B 94.091 220 11 2 3361 3578 30668329 30668110 2.060000e-87 333.0
17 TraesCS7A01G400100 chr4B 94.091 220 11 2 3361 3578 36885428 36885209 2.060000e-87 333.0
18 TraesCS7A01G400100 chrUn 81.269 1340 223 18 1083 2405 30095185 30096513 0.000000e+00 1059.0
19 TraesCS7A01G400100 chr5A 79.324 1480 260 27 1091 2553 706653346 706654796 0.000000e+00 996.0
20 TraesCS7A01G400100 chr5A 99.288 281 2 0 3064 3344 151259433 151259713 3.190000e-140 508.0
21 TraesCS7A01G400100 chr2B 79.004 1486 271 28 1090 2553 762118266 762116800 0.000000e+00 977.0
22 TraesCS7A01G400100 chr2B 99.293 283 2 0 3064 3346 81319072 81318790 2.460000e-141 512.0
23 TraesCS7A01G400100 chr2B 96.959 296 7 2 3050 3345 564821844 564821551 2.480000e-136 496.0
24 TraesCS7A01G400100 chr2B 94.144 222 11 2 3358 3577 220048407 220048628 1.590000e-88 337.0
25 TraesCS7A01G400100 chr6B 99.288 281 2 0 3066 3346 680301075 680300795 3.190000e-140 508.0
26 TraesCS7A01G400100 chr2A 99.288 281 2 0 3066 3346 773800401 773800681 3.190000e-140 508.0
27 TraesCS7A01G400100 chr1B 98.940 283 3 0 3063 3345 373149478 373149760 1.150000e-139 507.0
28 TraesCS7A01G400100 chr1B 94.091 220 11 2 3361 3578 324809509 324809290 2.060000e-87 333.0
29 TraesCS7A01G400100 chr1D 94.595 222 10 2 3359 3578 410536118 410536339 3.420000e-90 342.0
30 TraesCS7A01G400100 chr1D 93.043 230 12 4 3353 3578 493955703 493955932 2.060000e-87 333.0
31 TraesCS7A01G400100 chr5B 93.722 223 12 2 3358 3578 674767285 674767507 2.060000e-87 333.0
32 TraesCS7A01G400100 chr2D 94.091 220 11 2 3361 3578 163686597 163686378 2.060000e-87 333.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G400100 chr7A 580223976 580227553 3577 False 6608.00 6608 100.0000 1 3578 1 chr7A.!!$F2 3577
1 TraesCS7A01G400100 chr7D 509530921 509534898 3977 True 1069.45 3838 93.9185 1 3049 4 chr7D.!!$R2 3048
2 TraesCS7A01G400100 chr7B 537515318 537518253 2935 True 1975.00 3432 89.4520 13 3039 2 chr7B.!!$R2 3026
3 TraesCS7A01G400100 chr4D 78779700 78781171 1471 False 1146.00 1146 80.8600 1076 2554 1 chr4D.!!$F1 1478
4 TraesCS7A01G400100 chr4D 503606900 503607914 1014 False 604.00 604 77.9220 1487 2553 1 chr4D.!!$F2 1066
5 TraesCS7A01G400100 chr4A 507592638 507594106 1468 False 1110.00 1110 80.3780 1076 2554 1 chr4A.!!$F1 1478
6 TraesCS7A01G400100 chr4B 110228800 110230294 1494 False 1099.00 1099 80.1180 1047 2554 1 chr4B.!!$F1 1507
7 TraesCS7A01G400100 chr4B 667426663 667428117 1454 False 1051.00 1051 79.9730 1090 2560 1 chr4B.!!$F3 1470
8 TraesCS7A01G400100 chrUn 30095185 30096513 1328 False 1059.00 1059 81.2690 1083 2405 1 chrUn.!!$F1 1322
9 TraesCS7A01G400100 chr5A 706653346 706654796 1450 False 996.00 996 79.3240 1091 2553 1 chr5A.!!$F2 1462
10 TraesCS7A01G400100 chr2B 762116800 762118266 1466 True 977.00 977 79.0040 1090 2553 1 chr2B.!!$R3 1463

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
974 1050 0.177604 CCACTGCTGCTCTCCCTTAG 59.822 60.0 0.0 0.0 0.0 2.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2851 2978 0.670546 CATCACACCCTCACCGACAC 60.671 60.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 85 1.345089 TGCTGCCAACATGAAAATGCT 59.655 42.857 0.00 0.00 0.00 3.79
89 94 6.571150 GCCAACATGAAAATGCTAGAAGTTCT 60.571 38.462 10.87 10.87 0.00 3.01
91 96 6.749923 ACATGAAAATGCTAGAAGTTCTCC 57.250 37.500 9.12 2.61 0.00 3.71
92 97 6.240894 ACATGAAAATGCTAGAAGTTCTCCA 58.759 36.000 9.12 8.55 0.00 3.86
147 152 6.381994 TCTTCGAGCTTTAGGGTAATTAGGAA 59.618 38.462 0.00 0.00 0.00 3.36
180 216 3.131400 ACTTTCTGCTAGAATCGAGTCCC 59.869 47.826 9.63 0.00 33.67 4.46
209 245 1.651240 CTGAGCTTTGATGGCCCGTG 61.651 60.000 0.00 0.00 0.00 4.94
278 314 4.763279 CGGTACCTGGAACCAAAGTTTTAT 59.237 41.667 10.90 0.00 35.94 1.40
279 315 5.242171 CGGTACCTGGAACCAAAGTTTTATT 59.758 40.000 10.90 0.00 35.94 1.40
280 316 6.430616 CGGTACCTGGAACCAAAGTTTTATTA 59.569 38.462 10.90 0.00 35.94 0.98
333 369 2.268298 CCAAGTAGTGCGCGACTTTAT 58.732 47.619 21.16 0.29 38.26 1.40
334 370 2.671396 CCAAGTAGTGCGCGACTTTATT 59.329 45.455 21.16 0.00 38.26 1.40
335 371 3.241995 CCAAGTAGTGCGCGACTTTATTC 60.242 47.826 21.16 0.00 38.26 1.75
336 372 3.226346 AGTAGTGCGCGACTTTATTCA 57.774 42.857 12.10 0.00 35.96 2.57
337 373 3.782046 AGTAGTGCGCGACTTTATTCAT 58.218 40.909 12.10 0.00 35.96 2.57
383 422 4.959723 ACCAAAATTCTGTCACCCAATTG 58.040 39.130 0.00 0.00 0.00 2.32
401 455 3.627395 TTGCCTCATTATCCAACTCGT 57.373 42.857 0.00 0.00 0.00 4.18
402 456 3.627395 TGCCTCATTATCCAACTCGTT 57.373 42.857 0.00 0.00 0.00 3.85
403 457 3.950397 TGCCTCATTATCCAACTCGTTT 58.050 40.909 0.00 0.00 0.00 3.60
404 458 5.092554 TGCCTCATTATCCAACTCGTTTA 57.907 39.130 0.00 0.00 0.00 2.01
405 459 5.680619 TGCCTCATTATCCAACTCGTTTAT 58.319 37.500 0.00 0.00 0.00 1.40
406 460 6.822442 TGCCTCATTATCCAACTCGTTTATA 58.178 36.000 0.00 0.00 0.00 0.98
407 461 7.276658 TGCCTCATTATCCAACTCGTTTATAA 58.723 34.615 0.00 0.00 0.00 0.98
408 462 7.936847 TGCCTCATTATCCAACTCGTTTATAAT 59.063 33.333 0.00 0.00 0.00 1.28
409 463 8.443937 GCCTCATTATCCAACTCGTTTATAATC 58.556 37.037 0.00 0.00 0.00 1.75
410 464 8.936864 CCTCATTATCCAACTCGTTTATAATCC 58.063 37.037 0.00 0.00 0.00 3.01
411 465 9.489084 CTCATTATCCAACTCGTTTATAATCCA 57.511 33.333 0.00 0.00 0.00 3.41
412 466 9.839817 TCATTATCCAACTCGTTTATAATCCAA 57.160 29.630 0.00 0.00 0.00 3.53
452 506 7.967890 TGATATCTGCATGTACCATGTAAAG 57.032 36.000 3.98 2.81 0.00 1.85
455 509 3.689161 TCTGCATGTACCATGTAAAGTGC 59.311 43.478 6.13 0.00 0.00 4.40
457 511 4.015764 TGCATGTACCATGTAAAGTGCAT 58.984 39.130 6.13 3.64 39.50 3.96
459 513 5.565592 CATGTACCATGTAAAGTGCATGT 57.434 39.130 16.93 0.00 46.01 3.21
460 514 6.676237 CATGTACCATGTAAAGTGCATGTA 57.324 37.500 16.93 0.00 46.01 2.29
461 515 6.718388 CATGTACCATGTAAAGTGCATGTAG 58.282 40.000 16.93 0.23 46.01 2.74
480 534 0.881118 GGCATGTGTCACCGTCAAAT 59.119 50.000 0.00 0.00 0.00 2.32
497 551 5.644644 GTCAAATCGGATGAATCTTTGCTT 58.355 37.500 0.00 0.00 0.00 3.91
510 564 2.886523 TCTTTGCTTGGGTCACATTCAG 59.113 45.455 0.00 0.00 0.00 3.02
511 565 0.961019 TTGCTTGGGTCACATTCAGC 59.039 50.000 0.00 0.00 0.00 4.26
512 566 1.236616 TGCTTGGGTCACATTCAGCG 61.237 55.000 0.00 0.00 0.00 5.18
513 567 1.237285 GCTTGGGTCACATTCAGCGT 61.237 55.000 0.00 0.00 0.00 5.07
517 571 2.027073 GGTCACATTCAGCGTGCGA 61.027 57.895 0.00 0.00 34.27 5.10
772 838 1.082561 GTGCGCGCCATATCATGTG 60.083 57.895 30.77 0.00 0.00 3.21
785 854 7.041848 CGCCATATCATGTGAAGATTAGAAACA 60.042 37.037 0.00 0.00 0.00 2.83
806 875 5.476614 ACAAACTAACCAGTAGAATCGACC 58.523 41.667 0.00 0.00 33.48 4.79
918 994 5.475220 AGTGTTCGAGCAGAGCAGTATATAT 59.525 40.000 0.73 0.00 41.13 0.86
921 997 7.808381 GTGTTCGAGCAGAGCAGTATATATAAA 59.192 37.037 0.73 0.00 40.77 1.40
963 1039 1.723273 CACACACACACCACTGCTG 59.277 57.895 0.00 0.00 0.00 4.41
964 1040 2.114670 ACACACACACCACTGCTGC 61.115 57.895 0.00 0.00 0.00 5.25
965 1041 1.820906 CACACACACCACTGCTGCT 60.821 57.895 0.00 0.00 0.00 4.24
966 1042 1.524621 ACACACACCACTGCTGCTC 60.525 57.895 0.00 0.00 0.00 4.26
968 1044 1.070445 ACACACCACTGCTGCTCTC 59.930 57.895 0.00 0.00 0.00 3.20
969 1045 1.670406 CACACCACTGCTGCTCTCC 60.670 63.158 0.00 0.00 0.00 3.71
970 1046 2.046507 CACCACTGCTGCTCTCCC 60.047 66.667 0.00 0.00 0.00 4.30
971 1047 2.203907 ACCACTGCTGCTCTCCCT 60.204 61.111 0.00 0.00 0.00 4.20
972 1048 1.845205 ACCACTGCTGCTCTCCCTT 60.845 57.895 0.00 0.00 0.00 3.95
973 1049 0.545309 ACCACTGCTGCTCTCCCTTA 60.545 55.000 0.00 0.00 0.00 2.69
974 1050 0.177604 CCACTGCTGCTCTCCCTTAG 59.822 60.000 0.00 0.00 0.00 2.18
975 1051 0.461693 CACTGCTGCTCTCCCTTAGC 60.462 60.000 0.00 0.00 40.50 3.09
976 1052 0.617249 ACTGCTGCTCTCCCTTAGCT 60.617 55.000 0.00 0.00 40.73 3.32
977 1053 0.179078 CTGCTGCTCTCCCTTAGCTG 60.179 60.000 0.00 0.00 40.73 4.24
978 1054 4.852962 CTGCTCTCCCTTAGCTGC 57.147 61.111 0.00 0.00 40.73 5.25
982 1058 1.333636 GCTCTCCCTTAGCTGCCAGA 61.334 60.000 0.00 0.00 37.01 3.86
983 1059 1.198713 CTCTCCCTTAGCTGCCAGAA 58.801 55.000 0.00 0.00 0.00 3.02
995 1071 1.731160 CTGCCAGAAAGAGAAGAAGCG 59.269 52.381 0.00 0.00 0.00 4.68
1095 1177 1.658686 CCTCCTCCGACGACTTCCTG 61.659 65.000 0.00 0.00 0.00 3.86
1170 1255 4.680237 TTCTCCGGCGTGCTGGTG 62.680 66.667 18.77 16.37 42.88 4.17
1575 1672 2.813179 GATGCGCAAGTACGGGCTG 61.813 63.158 17.11 0.00 44.61 4.85
1725 1822 1.598130 GTGGAAGGTGCAGCTCGTT 60.598 57.895 20.46 3.05 0.00 3.85
1728 1825 2.032681 AAGGTGCAGCTCGTTCCC 59.967 61.111 20.46 0.00 0.00 3.97
1878 1978 4.988598 CAGCAGGCCGTGTTCCGT 62.989 66.667 0.00 0.00 33.66 4.69
2128 2228 2.895424 AAGGCGGTGTGGAAGGAGG 61.895 63.158 0.00 0.00 0.00 4.30
2201 2304 4.805231 CGGCGGGTACATGTGCGA 62.805 66.667 9.11 0.00 0.00 5.10
2415 2527 2.507992 CAGAACGCGCTGGAGGAG 60.508 66.667 5.73 0.00 32.26 3.69
2416 2528 3.764466 AGAACGCGCTGGAGGAGG 61.764 66.667 5.73 0.00 0.00 4.30
2417 2529 3.760035 GAACGCGCTGGAGGAGGA 61.760 66.667 5.73 0.00 0.00 3.71
2418 2530 3.708220 GAACGCGCTGGAGGAGGAG 62.708 68.421 5.73 0.00 0.00 3.69
2427 2545 2.726351 GGAGGAGGAGGACGGCTTG 61.726 68.421 0.00 0.00 0.00 4.01
2490 2611 0.685097 TGGGCAACTACGAGAAGCTT 59.315 50.000 0.00 0.00 0.00 3.74
2525 2646 1.295423 CCGTCGATCCCACCAACTT 59.705 57.895 0.00 0.00 0.00 2.66
2585 2706 2.256764 ACGCGAGTGAGCACTGAG 59.743 61.111 15.93 3.36 46.97 3.35
2586 2707 3.177920 CGCGAGTGAGCACTGAGC 61.178 66.667 8.03 11.81 42.66 4.26
2621 2747 2.599216 CCAAGGCAAGGCATCCATT 58.401 52.632 0.00 0.00 0.00 3.16
2627 2753 1.405872 GCAAGGCATCCATTGGATCA 58.594 50.000 15.50 0.00 40.98 2.92
2653 2779 8.408043 TCAACAAACTAAATCATTCATGGTCT 57.592 30.769 0.00 0.00 0.00 3.85
2654 2780 8.859090 TCAACAAACTAAATCATTCATGGTCTT 58.141 29.630 0.00 0.00 0.00 3.01
2689 2815 2.672874 TGCTGCGTAAAGAATACTGCTG 59.327 45.455 0.00 0.00 0.00 4.41
2833 2959 5.440234 ACTACTACAGTTGAGACAGTGTG 57.560 43.478 0.00 0.00 31.59 3.82
2842 2968 1.202687 TGAGACAGTGTGCTTTCCTGG 60.203 52.381 0.00 0.00 0.00 4.45
2851 2978 3.865164 GTGTGCTTTCCTGGAAAAACAAG 59.135 43.478 26.48 16.10 33.27 3.16
2885 3012 4.217118 GGTGTGATGCTTCTTGAGATGTTT 59.783 41.667 0.88 0.00 0.00 2.83
2886 3013 5.278660 GGTGTGATGCTTCTTGAGATGTTTT 60.279 40.000 0.88 0.00 0.00 2.43
2925 3055 4.271687 GTGTAGCGTGCTTATGTTATTGC 58.728 43.478 0.00 0.00 0.00 3.56
2944 3077 9.869844 GTTATTGCTCATTAATTGCACTACTAG 57.130 33.333 11.19 0.00 36.37 2.57
2980 3113 0.729116 TATTCGACCGACCACTCGAC 59.271 55.000 0.00 0.00 43.06 4.20
2998 3131 8.812329 CCACTCGACTTTCTATTTCTATCTTTG 58.188 37.037 0.00 0.00 0.00 2.77
3050 4096 6.292389 CGAAGGAGCATAAGTTTCATTAGG 57.708 41.667 0.00 0.00 0.00 2.69
3051 4097 5.817816 CGAAGGAGCATAAGTTTCATTAGGT 59.182 40.000 0.00 0.00 0.00 3.08
3052 4098 6.018669 CGAAGGAGCATAAGTTTCATTAGGTC 60.019 42.308 0.00 0.00 0.00 3.85
3053 4099 5.685728 AGGAGCATAAGTTTCATTAGGTCC 58.314 41.667 0.00 0.00 0.00 4.46
3054 4100 5.430089 AGGAGCATAAGTTTCATTAGGTCCT 59.570 40.000 0.00 0.00 29.85 3.85
3055 4101 5.529060 GGAGCATAAGTTTCATTAGGTCCTG 59.471 44.000 0.00 0.00 0.00 3.86
3056 4102 6.067217 AGCATAAGTTTCATTAGGTCCTGT 57.933 37.500 0.00 0.00 0.00 4.00
3057 4103 6.485171 AGCATAAGTTTCATTAGGTCCTGTT 58.515 36.000 0.00 0.00 0.00 3.16
3058 4104 6.948309 AGCATAAGTTTCATTAGGTCCTGTTT 59.052 34.615 0.00 0.00 0.00 2.83
3059 4105 7.029563 GCATAAGTTTCATTAGGTCCTGTTTG 58.970 38.462 0.00 0.00 0.00 2.93
3060 4106 7.538575 CATAAGTTTCATTAGGTCCTGTTTGG 58.461 38.462 0.00 0.00 37.10 3.28
3061 4107 5.061721 AGTTTCATTAGGTCCTGTTTGGT 57.938 39.130 0.00 0.00 37.07 3.67
3062 4108 5.454966 AGTTTCATTAGGTCCTGTTTGGTT 58.545 37.500 0.00 0.00 37.07 3.67
3063 4109 5.535030 AGTTTCATTAGGTCCTGTTTGGTTC 59.465 40.000 0.00 0.00 37.07 3.62
3064 4110 4.715534 TCATTAGGTCCTGTTTGGTTCA 57.284 40.909 0.00 0.00 37.07 3.18
3065 4111 5.255397 TCATTAGGTCCTGTTTGGTTCAT 57.745 39.130 0.00 0.00 37.07 2.57
3066 4112 6.381498 TCATTAGGTCCTGTTTGGTTCATA 57.619 37.500 0.00 0.00 37.07 2.15
3067 4113 6.785076 TCATTAGGTCCTGTTTGGTTCATAA 58.215 36.000 0.00 0.00 37.07 1.90
3068 4114 6.884295 TCATTAGGTCCTGTTTGGTTCATAAG 59.116 38.462 0.00 0.00 37.07 1.73
3069 4115 4.034285 AGGTCCTGTTTGGTTCATAAGG 57.966 45.455 0.00 0.00 37.07 2.69
3070 4116 2.492088 GGTCCTGTTTGGTTCATAAGGC 59.508 50.000 0.00 0.00 37.07 4.35
3071 4117 3.421844 GTCCTGTTTGGTTCATAAGGCT 58.578 45.455 0.00 0.00 37.07 4.58
3072 4118 3.191371 GTCCTGTTTGGTTCATAAGGCTG 59.809 47.826 0.00 0.00 37.07 4.85
3073 4119 2.493278 CCTGTTTGGTTCATAAGGCTGG 59.507 50.000 0.00 0.00 0.00 4.85
3074 4120 3.157087 CTGTTTGGTTCATAAGGCTGGT 58.843 45.455 0.00 0.00 0.00 4.00
3075 4121 3.153919 TGTTTGGTTCATAAGGCTGGTC 58.846 45.455 0.00 0.00 0.00 4.02
3076 4122 3.153919 GTTTGGTTCATAAGGCTGGTCA 58.846 45.455 0.00 0.00 0.00 4.02
3077 4123 3.737559 TTGGTTCATAAGGCTGGTCAT 57.262 42.857 0.00 0.00 0.00 3.06
3078 4124 4.853468 TTGGTTCATAAGGCTGGTCATA 57.147 40.909 0.00 0.00 0.00 2.15
3079 4125 4.422073 TGGTTCATAAGGCTGGTCATAG 57.578 45.455 0.00 0.00 0.00 2.23
3080 4126 3.780294 TGGTTCATAAGGCTGGTCATAGT 59.220 43.478 0.00 0.00 0.00 2.12
3081 4127 4.130118 GGTTCATAAGGCTGGTCATAGTG 58.870 47.826 0.00 0.00 0.00 2.74
3082 4128 4.130118 GTTCATAAGGCTGGTCATAGTGG 58.870 47.826 0.00 0.00 0.00 4.00
3083 4129 2.705658 TCATAAGGCTGGTCATAGTGGG 59.294 50.000 0.00 0.00 0.00 4.61
3084 4130 1.507140 TAAGGCTGGTCATAGTGGGG 58.493 55.000 0.00 0.00 0.00 4.96
3085 4131 0.253160 AAGGCTGGTCATAGTGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
3086 4132 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
3087 4133 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
3088 4134 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
3089 4135 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
3090 4136 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
3091 4137 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
3092 4138 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
3093 4139 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
3094 4140 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
3095 4141 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
3096 4142 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
3097 4143 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
3098 4144 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
3099 4145 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
3100 4146 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
3101 4147 6.649041 AGTGGGGAGTAACTTAGACTAGTA 57.351 41.667 0.00 0.00 0.00 1.82
3102 4148 7.037342 AGTGGGGAGTAACTTAGACTAGTAA 57.963 40.000 0.00 0.00 0.00 2.24
3103 4149 6.889177 AGTGGGGAGTAACTTAGACTAGTAAC 59.111 42.308 0.00 0.00 0.00 2.50
3104 4150 6.660949 GTGGGGAGTAACTTAGACTAGTAACA 59.339 42.308 0.00 0.00 0.00 2.41
3105 4151 7.341512 GTGGGGAGTAACTTAGACTAGTAACAT 59.658 40.741 0.00 0.00 0.00 2.71
3106 4152 8.560039 TGGGGAGTAACTTAGACTAGTAACATA 58.440 37.037 0.00 0.00 0.00 2.29
3107 4153 8.845227 GGGGAGTAACTTAGACTAGTAACATAC 58.155 40.741 0.00 0.00 0.00 2.39
3108 4154 9.401058 GGGAGTAACTTAGACTAGTAACATACA 57.599 37.037 0.00 0.00 0.00 2.29
3144 4190 9.364653 AGTCTATGTTACTACCTTTATAGTGGG 57.635 37.037 0.00 0.00 36.09 4.61
3145 4191 9.140874 GTCTATGTTACTACCTTTATAGTGGGT 57.859 37.037 0.00 0.00 36.09 4.51
3153 4199 7.598759 CTACCTTTATAGTGGGTAGTGTCAT 57.401 40.000 14.51 0.00 44.30 3.06
3154 4200 8.701908 CTACCTTTATAGTGGGTAGTGTCATA 57.298 38.462 14.51 0.00 44.30 2.15
3155 4201 7.598759 ACCTTTATAGTGGGTAGTGTCATAG 57.401 40.000 0.00 0.00 0.00 2.23
3156 4202 6.553852 ACCTTTATAGTGGGTAGTGTCATAGG 59.446 42.308 0.00 0.00 0.00 2.57
3157 4203 6.553852 CCTTTATAGTGGGTAGTGTCATAGGT 59.446 42.308 0.00 0.00 0.00 3.08
3158 4204 6.971726 TTATAGTGGGTAGTGTCATAGGTG 57.028 41.667 0.00 0.00 0.00 4.00
3159 4205 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
3160 4206 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
3161 4207 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
3162 4208 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
3163 4209 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
3164 4210 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
3165 4211 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
3184 4230 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
3185 4231 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
3186 4232 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
3194 4240 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
3195 4241 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
3196 4242 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
3197 4243 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
3198 4244 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
3209 4255 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
3210 4256 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
3211 4257 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
3212 4258 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
3213 4259 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
3214 4260 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
3215 4261 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
3216 4262 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
3217 4263 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
3218 4264 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
3219 4265 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
3220 4266 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
3221 4267 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
3222 4268 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
3223 4269 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
3224 4270 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
3225 4271 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
3226 4272 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
3227 4273 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
3228 4274 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
3229 4275 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
3230 4276 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
3259 4305 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
3260 4306 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
3261 4307 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
3262 4308 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
3263 4309 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
3264 4310 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
3265 4311 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
3266 4312 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
3267 4313 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
3268 4314 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
3269 4315 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
3270 4316 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
3271 4317 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
3272 4318 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
3273 4319 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
3274 4320 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
3275 4321 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
3276 4322 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
3277 4323 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
3278 4324 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
3279 4325 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
3280 4326 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
3281 4327 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
3282 4328 5.824624 CCTCATTAACTACTTGCCACATCAT 59.175 40.000 0.00 0.00 0.00 2.45
3283 4329 6.017605 CCTCATTAACTACTTGCCACATCATC 60.018 42.308 0.00 0.00 0.00 2.92
3284 4330 6.413892 TCATTAACTACTTGCCACATCATCA 58.586 36.000 0.00 0.00 0.00 3.07
3285 4331 7.056006 TCATTAACTACTTGCCACATCATCAT 58.944 34.615 0.00 0.00 0.00 2.45
3286 4332 7.557358 TCATTAACTACTTGCCACATCATCATT 59.443 33.333 0.00 0.00 0.00 2.57
3287 4333 7.701539 TTAACTACTTGCCACATCATCATTT 57.298 32.000 0.00 0.00 0.00 2.32
3288 4334 6.594788 AACTACTTGCCACATCATCATTTT 57.405 33.333 0.00 0.00 0.00 1.82
3289 4335 6.594788 ACTACTTGCCACATCATCATTTTT 57.405 33.333 0.00 0.00 0.00 1.94
3290 4336 6.392354 ACTACTTGCCACATCATCATTTTTG 58.608 36.000 0.00 0.00 0.00 2.44
3291 4337 3.998341 ACTTGCCACATCATCATTTTTGC 59.002 39.130 0.00 0.00 0.00 3.68
3292 4338 3.965379 TGCCACATCATCATTTTTGCT 57.035 38.095 0.00 0.00 0.00 3.91
3293 4339 4.274602 TGCCACATCATCATTTTTGCTT 57.725 36.364 0.00 0.00 0.00 3.91
3294 4340 5.402997 TGCCACATCATCATTTTTGCTTA 57.597 34.783 0.00 0.00 0.00 3.09
3295 4341 5.979993 TGCCACATCATCATTTTTGCTTAT 58.020 33.333 0.00 0.00 0.00 1.73
3296 4342 5.813157 TGCCACATCATCATTTTTGCTTATG 59.187 36.000 0.00 0.00 0.00 1.90
3297 4343 5.813672 GCCACATCATCATTTTTGCTTATGT 59.186 36.000 0.00 0.00 0.00 2.29
3298 4344 6.237996 GCCACATCATCATTTTTGCTTATGTG 60.238 38.462 0.00 0.00 41.50 3.21
3299 4345 7.229228 CACATCATCATTTTTGCTTATGTGG 57.771 36.000 0.00 0.00 39.34 4.17
3300 4346 5.813672 ACATCATCATTTTTGCTTATGTGGC 59.186 36.000 0.00 0.00 0.00 5.01
3301 4347 5.402997 TCATCATTTTTGCTTATGTGGCA 57.597 34.783 0.00 0.00 37.97 4.92
3302 4348 5.979993 TCATCATTTTTGCTTATGTGGCAT 58.020 33.333 0.00 0.00 39.54 4.40
3303 4349 6.044046 TCATCATTTTTGCTTATGTGGCATC 58.956 36.000 0.00 0.00 39.54 3.91
3304 4350 5.664294 TCATTTTTGCTTATGTGGCATCT 57.336 34.783 0.00 0.00 39.54 2.90
3305 4351 6.772360 TCATTTTTGCTTATGTGGCATCTA 57.228 33.333 0.00 0.00 39.54 1.98
3306 4352 7.350744 TCATTTTTGCTTATGTGGCATCTAT 57.649 32.000 0.00 0.00 39.54 1.98
3307 4353 7.204604 TCATTTTTGCTTATGTGGCATCTATG 58.795 34.615 0.00 0.00 39.54 2.23
3308 4354 6.528537 TTTTTGCTTATGTGGCATCTATGT 57.471 33.333 0.00 0.00 39.54 2.29
3309 4355 6.528537 TTTTGCTTATGTGGCATCTATGTT 57.471 33.333 0.00 0.00 39.54 2.71
3310 4356 7.637631 TTTTGCTTATGTGGCATCTATGTTA 57.362 32.000 0.00 0.00 39.54 2.41
3311 4357 6.618287 TTGCTTATGTGGCATCTATGTTAC 57.382 37.500 0.00 0.00 39.54 2.50
3312 4358 5.928976 TGCTTATGTGGCATCTATGTTACT 58.071 37.500 0.00 0.00 34.56 2.24
3313 4359 7.061566 TGCTTATGTGGCATCTATGTTACTA 57.938 36.000 0.00 0.00 34.56 1.82
3314 4360 7.679783 TGCTTATGTGGCATCTATGTTACTAT 58.320 34.615 0.00 0.00 34.56 2.12
3315 4361 7.819415 TGCTTATGTGGCATCTATGTTACTATC 59.181 37.037 0.00 0.00 34.56 2.08
3316 4362 8.037758 GCTTATGTGGCATCTATGTTACTATCT 58.962 37.037 0.00 0.00 0.00 1.98
3320 4366 8.422577 TGTGGCATCTATGTTACTATCTATGT 57.577 34.615 0.00 0.00 0.00 2.29
3321 4367 8.870116 TGTGGCATCTATGTTACTATCTATGTT 58.130 33.333 0.00 0.00 0.00 2.71
3335 4381 8.638629 ACTATCTATGTTACTCCCACTATGAC 57.361 38.462 0.00 0.00 0.00 3.06
3336 4382 6.919775 ATCTATGTTACTCCCACTATGACC 57.080 41.667 0.00 0.00 0.00 4.02
3337 4383 5.773091 TCTATGTTACTCCCACTATGACCA 58.227 41.667 0.00 0.00 0.00 4.02
3338 4384 5.833667 TCTATGTTACTCCCACTATGACCAG 59.166 44.000 0.00 0.00 0.00 4.00
3339 4385 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
3340 4386 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
3341 4387 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
3342 4388 1.291033 ACTCCCACTATGACCAGCCTA 59.709 52.381 0.00 0.00 0.00 3.93
3343 4389 2.292918 ACTCCCACTATGACCAGCCTAA 60.293 50.000 0.00 0.00 0.00 2.69
3344 4390 2.366916 CTCCCACTATGACCAGCCTAAG 59.633 54.545 0.00 0.00 0.00 2.18
3345 4391 2.119495 CCCACTATGACCAGCCTAAGT 58.881 52.381 0.00 0.00 0.00 2.24
3346 4392 2.103263 CCCACTATGACCAGCCTAAGTC 59.897 54.545 0.00 0.00 0.00 3.01
3347 4393 2.103263 CCACTATGACCAGCCTAAGTCC 59.897 54.545 0.00 0.00 31.76 3.85
3348 4394 3.034635 CACTATGACCAGCCTAAGTCCT 58.965 50.000 0.00 0.00 31.76 3.85
3349 4395 4.215908 CACTATGACCAGCCTAAGTCCTA 58.784 47.826 0.00 0.00 31.76 2.94
3350 4396 4.649674 CACTATGACCAGCCTAAGTCCTAA 59.350 45.833 0.00 0.00 31.76 2.69
3351 4397 4.896482 ACTATGACCAGCCTAAGTCCTAAG 59.104 45.833 0.00 0.00 31.76 2.18
3352 4398 3.468071 TGACCAGCCTAAGTCCTAAGA 57.532 47.619 0.00 0.00 31.76 2.10
3353 4399 3.097614 TGACCAGCCTAAGTCCTAAGAC 58.902 50.000 0.00 0.00 43.89 3.01
3376 4422 3.857157 TTTTAGGCTAGCATAGTGGGG 57.143 47.619 18.24 0.00 41.93 4.96
3377 4423 1.729586 TTAGGCTAGCATAGTGGGGG 58.270 55.000 18.24 0.00 41.93 5.40
3378 4424 0.566176 TAGGCTAGCATAGTGGGGGT 59.434 55.000 18.24 0.00 41.93 4.95
3379 4425 0.566176 AGGCTAGCATAGTGGGGGTA 59.434 55.000 18.24 0.00 41.93 3.69
3380 4426 1.061657 AGGCTAGCATAGTGGGGGTAA 60.062 52.381 18.24 0.00 41.93 2.85
3381 4427 1.071857 GGCTAGCATAGTGGGGGTAAC 59.928 57.143 18.24 0.00 41.93 2.50
3382 4428 2.047830 GCTAGCATAGTGGGGGTAACT 58.952 52.381 10.63 0.00 41.93 2.24
3383 4429 2.438392 GCTAGCATAGTGGGGGTAACTT 59.562 50.000 10.63 0.00 41.93 2.66
3384 4430 3.644738 GCTAGCATAGTGGGGGTAACTTA 59.355 47.826 10.63 0.00 41.93 2.24
3385 4431 4.262506 GCTAGCATAGTGGGGGTAACTTAG 60.263 50.000 10.63 0.00 41.93 2.18
3386 4432 3.046374 AGCATAGTGGGGGTAACTTAGG 58.954 50.000 0.00 0.00 0.00 2.69
3387 4433 2.775960 GCATAGTGGGGGTAACTTAGGT 59.224 50.000 0.00 0.00 0.00 3.08
3388 4434 3.969312 GCATAGTGGGGGTAACTTAGGTA 59.031 47.826 0.00 0.00 0.00 3.08
3389 4435 4.040095 GCATAGTGGGGGTAACTTAGGTAG 59.960 50.000 0.00 0.00 0.00 3.18
3390 4436 3.860647 AGTGGGGGTAACTTAGGTAGT 57.139 47.619 0.00 0.00 39.32 2.73
3391 4437 4.972999 AGTGGGGGTAACTTAGGTAGTA 57.027 45.455 0.00 0.00 35.54 1.82
3392 4438 5.289652 AGTGGGGGTAACTTAGGTAGTAA 57.710 43.478 0.00 0.00 35.54 2.24
3393 4439 5.026121 AGTGGGGGTAACTTAGGTAGTAAC 58.974 45.833 0.00 0.00 35.54 2.50
3394 4440 5.026121 GTGGGGGTAACTTAGGTAGTAACT 58.974 45.833 0.00 0.00 35.54 2.24
3395 4441 5.485353 GTGGGGGTAACTTAGGTAGTAACTT 59.515 44.000 0.00 0.00 35.54 2.66
3396 4442 6.667848 GTGGGGGTAACTTAGGTAGTAACTTA 59.332 42.308 0.00 0.00 35.54 2.24
3397 4443 7.180229 GTGGGGGTAACTTAGGTAGTAACTTAA 59.820 40.741 0.00 0.00 35.54 1.85
3398 4444 7.180229 TGGGGGTAACTTAGGTAGTAACTTAAC 59.820 40.741 0.00 0.00 35.54 2.01
3399 4445 7.180229 GGGGGTAACTTAGGTAGTAACTTAACA 59.820 40.741 0.00 0.00 35.54 2.41
3400 4446 8.035394 GGGGTAACTTAGGTAGTAACTTAACAC 58.965 40.741 0.00 0.00 35.54 3.32
3401 4447 8.585018 GGGTAACTTAGGTAGTAACTTAACACA 58.415 37.037 0.00 0.00 35.54 3.72
3405 4451 7.845037 ACTTAGGTAGTAACTTAACACATCCC 58.155 38.462 0.00 0.00 34.56 3.85
3406 4452 7.455638 ACTTAGGTAGTAACTTAACACATCCCA 59.544 37.037 0.00 0.00 34.56 4.37
3407 4453 6.691255 AGGTAGTAACTTAACACATCCCAA 57.309 37.500 0.00 0.00 0.00 4.12
3408 4454 6.708285 AGGTAGTAACTTAACACATCCCAAG 58.292 40.000 0.00 0.00 0.00 3.61
3409 4455 6.499350 AGGTAGTAACTTAACACATCCCAAGA 59.501 38.462 0.00 0.00 0.00 3.02
3410 4456 6.592994 GGTAGTAACTTAACACATCCCAAGAC 59.407 42.308 0.00 0.00 0.00 3.01
3411 4457 6.182507 AGTAACTTAACACATCCCAAGACA 57.817 37.500 0.00 0.00 0.00 3.41
3412 4458 6.597562 AGTAACTTAACACATCCCAAGACAA 58.402 36.000 0.00 0.00 0.00 3.18
3413 4459 7.057894 AGTAACTTAACACATCCCAAGACAAA 58.942 34.615 0.00 0.00 0.00 2.83
3414 4460 6.976934 AACTTAACACATCCCAAGACAAAT 57.023 33.333 0.00 0.00 0.00 2.32
3415 4461 6.976934 ACTTAACACATCCCAAGACAAATT 57.023 33.333 0.00 0.00 0.00 1.82
3416 4462 7.360113 ACTTAACACATCCCAAGACAAATTT 57.640 32.000 0.00 0.00 0.00 1.82
3417 4463 7.209475 ACTTAACACATCCCAAGACAAATTTG 58.791 34.615 16.67 16.67 0.00 2.32
3418 4464 3.993920 ACACATCCCAAGACAAATTTGC 58.006 40.909 18.12 10.76 0.00 3.68
3419 4465 3.642848 ACACATCCCAAGACAAATTTGCT 59.357 39.130 18.12 12.78 0.00 3.91
3420 4466 4.101430 ACACATCCCAAGACAAATTTGCTT 59.899 37.500 18.12 17.42 0.00 3.91
3421 4467 5.304101 ACACATCCCAAGACAAATTTGCTTA 59.696 36.000 18.12 8.05 0.00 3.09
3422 4468 6.014327 ACACATCCCAAGACAAATTTGCTTAT 60.014 34.615 18.12 9.70 0.00 1.73
3423 4469 6.311935 CACATCCCAAGACAAATTTGCTTATG 59.688 38.462 18.12 19.73 0.00 1.90
3424 4470 6.014327 ACATCCCAAGACAAATTTGCTTATGT 60.014 34.615 18.12 20.21 0.00 2.29
3425 4471 5.782047 TCCCAAGACAAATTTGCTTATGTG 58.218 37.500 18.12 10.37 0.00 3.21
3426 4472 4.931002 CCCAAGACAAATTTGCTTATGTGG 59.069 41.667 18.12 16.91 0.00 4.17
3427 4473 4.389687 CCAAGACAAATTTGCTTATGTGGC 59.610 41.667 18.12 0.00 0.00 5.01
3428 4474 4.870123 AGACAAATTTGCTTATGTGGCA 57.130 36.364 18.12 0.00 37.97 4.92
3429 4475 5.212532 AGACAAATTTGCTTATGTGGCAA 57.787 34.783 18.12 0.00 46.12 4.52
3440 4486 7.637631 TGCTTATGTGGCAAGTATTTAATGA 57.362 32.000 0.00 0.00 36.71 2.57
3441 4487 8.236585 TGCTTATGTGGCAAGTATTTAATGAT 57.763 30.769 0.00 0.00 36.71 2.45
3442 4488 8.136800 TGCTTATGTGGCAAGTATTTAATGATG 58.863 33.333 0.00 0.00 36.71 3.07
3443 4489 8.352201 GCTTATGTGGCAAGTATTTAATGATGA 58.648 33.333 0.00 0.00 0.00 2.92
3447 4493 8.347004 TGTGGCAAGTATTTAATGATGAAAGA 57.653 30.769 0.00 0.00 0.00 2.52
3448 4494 8.461222 TGTGGCAAGTATTTAATGATGAAAGAG 58.539 33.333 0.00 0.00 0.00 2.85
3449 4495 7.917505 GTGGCAAGTATTTAATGATGAAAGAGG 59.082 37.037 0.00 0.00 0.00 3.69
3450 4496 7.615365 TGGCAAGTATTTAATGATGAAAGAGGT 59.385 33.333 0.00 0.00 0.00 3.85
3451 4497 7.917505 GGCAAGTATTTAATGATGAAAGAGGTG 59.082 37.037 0.00 0.00 0.00 4.00
3452 4498 7.433425 GCAAGTATTTAATGATGAAAGAGGTGC 59.567 37.037 0.00 0.00 0.00 5.01
3453 4499 8.680903 CAAGTATTTAATGATGAAAGAGGTGCT 58.319 33.333 0.00 0.00 0.00 4.40
3454 4500 8.814038 AGTATTTAATGATGAAAGAGGTGCTT 57.186 30.769 0.00 0.00 38.88 3.91
3455 4501 8.680903 AGTATTTAATGATGAAAGAGGTGCTTG 58.319 33.333 0.00 0.00 36.80 4.01
3456 4502 6.899393 TTTAATGATGAAAGAGGTGCTTGT 57.101 33.333 0.00 0.00 36.80 3.16
3457 4503 4.778534 AATGATGAAAGAGGTGCTTGTG 57.221 40.909 0.00 0.00 36.80 3.33
3458 4504 2.507484 TGATGAAAGAGGTGCTTGTGG 58.493 47.619 0.00 0.00 36.80 4.17
3459 4505 2.158623 TGATGAAAGAGGTGCTTGTGGT 60.159 45.455 0.00 0.00 36.80 4.16
3460 4506 3.072330 TGATGAAAGAGGTGCTTGTGGTA 59.928 43.478 0.00 0.00 36.80 3.25
3461 4507 3.569194 TGAAAGAGGTGCTTGTGGTAA 57.431 42.857 0.00 0.00 36.80 2.85
3462 4508 3.211045 TGAAAGAGGTGCTTGTGGTAAC 58.789 45.455 0.00 0.00 36.80 2.50
3463 4509 3.211045 GAAAGAGGTGCTTGTGGTAACA 58.789 45.455 0.00 0.00 40.32 2.41
3464 4510 3.821033 GAAAGAGGTGCTTGTGGTAACAT 59.179 43.478 0.00 0.00 42.99 2.71
3465 4511 4.980573 AAAGAGGTGCTTGTGGTAACATA 58.019 39.130 0.00 0.00 42.99 2.29
3466 4512 5.381757 AAAGAGGTGCTTGTGGTAACATAA 58.618 37.500 0.00 0.00 46.24 1.90
3491 4537 4.178540 TGTTACTGTAACATAGCGCTTCC 58.821 43.478 25.14 0.00 43.23 3.46
3492 4538 2.311124 ACTGTAACATAGCGCTTCCC 57.689 50.000 18.68 0.00 0.00 3.97
3493 4539 1.209128 CTGTAACATAGCGCTTCCCG 58.791 55.000 18.68 4.15 40.75 5.14
3494 4540 0.818938 TGTAACATAGCGCTTCCCGA 59.181 50.000 18.68 0.00 40.02 5.14
3495 4541 1.202371 TGTAACATAGCGCTTCCCGAG 60.202 52.381 18.68 1.79 40.02 4.63
3496 4542 0.387929 TAACATAGCGCTTCCCGAGG 59.612 55.000 18.68 0.00 40.02 4.63
3497 4543 2.663188 CATAGCGCTTCCCGAGGC 60.663 66.667 18.68 0.00 40.02 4.70
3498 4544 3.154473 ATAGCGCTTCCCGAGGCA 61.154 61.111 18.68 0.00 40.02 4.75
3499 4545 2.731571 ATAGCGCTTCCCGAGGCAA 61.732 57.895 18.68 0.00 40.02 4.52
3500 4546 2.252072 ATAGCGCTTCCCGAGGCAAA 62.252 55.000 18.68 0.00 40.02 3.68
3501 4547 2.252072 TAGCGCTTCCCGAGGCAAAT 62.252 55.000 18.68 0.00 40.02 2.32
3502 4548 2.793946 CGCTTCCCGAGGCAAATG 59.206 61.111 0.00 0.00 40.02 2.32
3503 4549 1.745115 CGCTTCCCGAGGCAAATGA 60.745 57.895 0.00 0.00 40.02 2.57
3504 4550 1.709147 CGCTTCCCGAGGCAAATGAG 61.709 60.000 0.00 0.00 40.02 2.90
3505 4551 0.678048 GCTTCCCGAGGCAAATGAGT 60.678 55.000 0.00 0.00 33.19 3.41
3506 4552 1.373570 CTTCCCGAGGCAAATGAGTC 58.626 55.000 0.00 0.00 0.00 3.36
3507 4553 0.984230 TTCCCGAGGCAAATGAGTCT 59.016 50.000 0.00 0.00 0.00 3.24
3508 4554 1.860641 TCCCGAGGCAAATGAGTCTA 58.139 50.000 0.00 0.00 0.00 2.59
3509 4555 2.398588 TCCCGAGGCAAATGAGTCTAT 58.601 47.619 0.00 0.00 0.00 1.98
3510 4556 3.572642 TCCCGAGGCAAATGAGTCTATA 58.427 45.455 0.00 0.00 0.00 1.31
3511 4557 3.964688 TCCCGAGGCAAATGAGTCTATAA 59.035 43.478 0.00 0.00 0.00 0.98
3512 4558 4.039245 TCCCGAGGCAAATGAGTCTATAAG 59.961 45.833 0.00 0.00 0.00 1.73
3513 4559 3.743396 CCGAGGCAAATGAGTCTATAAGC 59.257 47.826 0.00 0.00 0.00 3.09
3514 4560 4.502259 CCGAGGCAAATGAGTCTATAAGCT 60.502 45.833 0.00 0.00 0.00 3.74
3515 4561 5.279006 CCGAGGCAAATGAGTCTATAAGCTA 60.279 44.000 0.00 0.00 0.00 3.32
3516 4562 6.216569 CGAGGCAAATGAGTCTATAAGCTAA 58.783 40.000 0.00 0.00 0.00 3.09
3517 4563 6.870965 CGAGGCAAATGAGTCTATAAGCTAAT 59.129 38.462 0.00 0.00 0.00 1.73
3518 4564 8.029522 CGAGGCAAATGAGTCTATAAGCTAATA 58.970 37.037 0.00 0.00 0.00 0.98
3519 4565 9.712305 GAGGCAAATGAGTCTATAAGCTAATAA 57.288 33.333 0.00 0.00 0.00 1.40
3563 4609 9.512435 ACTAGTATTATGTTACTTTGCACTACG 57.488 33.333 0.00 0.00 34.35 3.51
3564 4610 7.766219 AGTATTATGTTACTTTGCACTACGG 57.234 36.000 0.00 0.00 0.00 4.02
3565 4611 7.549839 AGTATTATGTTACTTTGCACTACGGA 58.450 34.615 0.00 0.00 0.00 4.69
3566 4612 6.903883 ATTATGTTACTTTGCACTACGGAG 57.096 37.500 0.00 0.00 0.00 4.63
3567 4613 3.034721 TGTTACTTTGCACTACGGAGG 57.965 47.619 0.00 0.00 0.00 4.30
3568 4614 2.366266 TGTTACTTTGCACTACGGAGGT 59.634 45.455 0.00 0.00 0.00 3.85
3569 4615 3.573538 TGTTACTTTGCACTACGGAGGTA 59.426 43.478 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 85 7.719633 AGCTGTTTGTTTTATGGAGAACTTCTA 59.280 33.333 0.00 0.00 0.00 2.10
89 94 2.298729 GGCCAGCTGTTTGTTTTATGGA 59.701 45.455 13.81 0.00 0.00 3.41
91 96 3.665745 AGGCCAGCTGTTTGTTTTATG 57.334 42.857 13.81 0.00 0.00 1.90
92 97 5.799827 TTAAGGCCAGCTGTTTGTTTTAT 57.200 34.783 13.81 0.00 0.00 1.40
134 139 3.046374 ACCATCGCTTCCTAATTACCCT 58.954 45.455 0.00 0.00 0.00 4.34
147 152 1.276421 AGCAGAAAGTACACCATCGCT 59.724 47.619 0.00 0.00 0.00 4.93
209 245 5.391312 AGGCACAACAAATAAAGATGACC 57.609 39.130 0.00 0.00 0.00 4.02
278 314 3.254657 GGCTGCACCAACAAACTATGTAA 59.745 43.478 0.50 0.00 42.99 2.41
279 315 2.817258 GGCTGCACCAACAAACTATGTA 59.183 45.455 0.50 0.00 42.99 2.29
280 316 1.613437 GGCTGCACCAACAAACTATGT 59.387 47.619 0.50 0.00 46.82 2.29
292 328 2.124529 GCTAGGGAAGGCTGCACC 60.125 66.667 0.50 1.45 39.61 5.01
333 369 3.634568 AACGGACGCAAATGAAATGAA 57.365 38.095 0.00 0.00 0.00 2.57
334 370 3.304257 CAAACGGACGCAAATGAAATGA 58.696 40.909 0.00 0.00 0.00 2.57
335 371 2.159986 GCAAACGGACGCAAATGAAATG 60.160 45.455 0.00 0.00 0.00 2.32
336 372 2.058057 GCAAACGGACGCAAATGAAAT 58.942 42.857 0.00 0.00 0.00 2.17
337 373 1.066303 AGCAAACGGACGCAAATGAAA 59.934 42.857 0.00 0.00 0.00 2.69
383 422 7.724305 TTATAAACGAGTTGGATAATGAGGC 57.276 36.000 0.00 0.00 0.00 4.70
408 462 9.781834 GATATCAATAATGACGTTTGTTTTGGA 57.218 29.630 0.00 0.00 38.69 3.53
409 463 9.787532 AGATATCAATAATGACGTTTGTTTTGG 57.212 29.630 5.32 0.00 38.69 3.28
411 465 9.289303 GCAGATATCAATAATGACGTTTGTTTT 57.711 29.630 5.32 0.00 38.69 2.43
412 466 8.458052 TGCAGATATCAATAATGACGTTTGTTT 58.542 29.630 5.32 0.00 38.69 2.83
457 511 0.037697 GACGGTGACACATGCCTACA 60.038 55.000 8.08 0.00 0.00 2.74
458 512 0.037697 TGACGGTGACACATGCCTAC 60.038 55.000 8.08 0.00 0.00 3.18
459 513 0.682292 TTGACGGTGACACATGCCTA 59.318 50.000 8.08 0.00 0.00 3.93
460 514 0.179032 TTTGACGGTGACACATGCCT 60.179 50.000 8.08 0.00 0.00 4.75
461 515 0.881118 ATTTGACGGTGACACATGCC 59.119 50.000 8.08 0.00 0.00 4.40
480 534 2.290896 ACCCAAGCAAAGATTCATCCGA 60.291 45.455 0.00 0.00 0.00 4.55
493 547 1.236616 CGCTGAATGTGACCCAAGCA 61.237 55.000 0.00 0.00 0.00 3.91
497 551 1.965930 GCACGCTGAATGTGACCCA 60.966 57.895 0.00 0.00 39.73 4.51
510 564 2.441378 TTCATACACGCTCGCACGC 61.441 57.895 0.00 0.00 36.19 5.34
511 565 1.071019 AGTTCATACACGCTCGCACG 61.071 55.000 0.00 0.00 39.50 5.34
512 566 0.366871 CAGTTCATACACGCTCGCAC 59.633 55.000 0.00 0.00 0.00 5.34
513 567 0.735978 CCAGTTCATACACGCTCGCA 60.736 55.000 0.00 0.00 0.00 5.10
517 571 3.738281 GCATACTCCAGTTCATACACGCT 60.738 47.826 0.00 0.00 0.00 5.07
625 691 0.389948 GACGCCTCAACTGACCGAAT 60.390 55.000 0.00 0.00 0.00 3.34
785 854 4.776308 AGGGTCGATTCTACTGGTTAGTTT 59.224 41.667 0.00 0.00 38.36 2.66
806 875 3.357079 GTGCACGTCAGGCCAAGG 61.357 66.667 5.01 0.10 0.00 3.61
863 932 8.735315 CAGTAGGAGTACTATATGATGTTCCAG 58.265 40.741 0.00 0.00 37.40 3.86
869 938 9.168451 CTACCACAGTAGGAGTACTATATGATG 57.832 40.741 0.00 0.00 42.05 3.07
918 994 1.552337 CTGACTGGAGCTGGCTCTTTA 59.448 52.381 19.92 8.11 42.38 1.85
921 997 0.835543 AACTGACTGGAGCTGGCTCT 60.836 55.000 19.92 2.84 42.38 4.09
963 1039 1.145819 CTGGCAGCTAAGGGAGAGC 59.854 63.158 0.00 0.00 40.42 4.09
964 1040 1.198713 TTCTGGCAGCTAAGGGAGAG 58.801 55.000 10.34 0.00 0.00 3.20
965 1041 1.556911 CTTTCTGGCAGCTAAGGGAGA 59.443 52.381 10.34 0.00 0.00 3.71
966 1042 1.556911 TCTTTCTGGCAGCTAAGGGAG 59.443 52.381 21.27 8.46 0.00 4.30
968 1044 1.556911 TCTCTTTCTGGCAGCTAAGGG 59.443 52.381 21.27 19.60 0.00 3.95
969 1045 3.055530 TCTTCTCTTTCTGGCAGCTAAGG 60.056 47.826 21.27 14.96 0.00 2.69
970 1046 4.199432 TCTTCTCTTTCTGGCAGCTAAG 57.801 45.455 10.34 15.11 0.00 2.18
971 1047 4.573900 CTTCTTCTCTTTCTGGCAGCTAA 58.426 43.478 10.34 5.69 0.00 3.09
972 1048 3.618507 GCTTCTTCTCTTTCTGGCAGCTA 60.619 47.826 10.34 0.00 0.00 3.32
973 1049 2.875267 GCTTCTTCTCTTTCTGGCAGCT 60.875 50.000 10.34 0.00 0.00 4.24
974 1050 1.468127 GCTTCTTCTCTTTCTGGCAGC 59.532 52.381 10.34 0.00 0.00 5.25
975 1051 1.731160 CGCTTCTTCTCTTTCTGGCAG 59.269 52.381 8.58 8.58 0.00 4.85
976 1052 1.344438 TCGCTTCTTCTCTTTCTGGCA 59.656 47.619 0.00 0.00 0.00 4.92
977 1053 2.086054 TCGCTTCTTCTCTTTCTGGC 57.914 50.000 0.00 0.00 0.00 4.85
978 1054 4.310769 TCTTTCGCTTCTTCTCTTTCTGG 58.689 43.478 0.00 0.00 0.00 3.86
982 1058 3.438434 GCCATCTTTCGCTTCTTCTCTTT 59.562 43.478 0.00 0.00 0.00 2.52
983 1059 3.006247 GCCATCTTTCGCTTCTTCTCTT 58.994 45.455 0.00 0.00 0.00 2.85
1156 1241 4.980805 GTTCACCAGCACGCCGGA 62.981 66.667 5.05 0.00 0.00 5.14
1170 1255 3.746492 ACTTGGCGTTCTTGATGTAGTTC 59.254 43.478 0.00 0.00 0.00 3.01
1527 1624 2.743928 CCTCCACCGCTGAAGTGC 60.744 66.667 0.00 0.00 33.75 4.40
1551 1648 1.193203 CCGTACTTGCGCATCATCATC 59.807 52.381 12.75 0.00 0.00 2.92
1575 1672 1.079127 CACCACCCTGTCGATGGAC 60.079 63.158 8.96 0.12 43.71 4.02
1704 1801 2.029844 GAGCTGCACCTTCCACGAC 61.030 63.158 1.02 0.00 0.00 4.34
2128 2228 1.014564 GTGAACCAGCTGGCGTAGAC 61.015 60.000 33.06 17.55 39.32 2.59
2448 2569 3.785859 TAGCGCTGGCCCCAGAAG 61.786 66.667 22.90 11.36 46.30 2.85
2511 2632 1.739067 GGAAGAAGTTGGTGGGATCG 58.261 55.000 0.00 0.00 0.00 3.69
2525 2646 1.883732 CTCTGCTCGTTCCGGAAGA 59.116 57.895 19.50 15.69 0.00 2.87
2576 2697 1.448189 CCTGCTCTGCTCAGTGCTC 60.448 63.158 20.17 0.00 45.29 4.26
2577 2698 2.663796 CCTGCTCTGCTCAGTGCT 59.336 61.111 20.17 0.00 45.29 4.40
2578 2699 2.436292 CCCTGCTCTGCTCAGTGC 60.436 66.667 14.81 14.81 45.28 4.40
2579 2700 0.954449 CAACCCTGCTCTGCTCAGTG 60.954 60.000 0.00 0.00 0.00 3.66
2580 2701 1.374190 CAACCCTGCTCTGCTCAGT 59.626 57.895 0.00 0.00 0.00 3.41
2581 2702 2.039405 GCAACCCTGCTCTGCTCAG 61.039 63.158 0.00 0.00 45.74 3.35
2582 2703 2.033141 GCAACCCTGCTCTGCTCA 59.967 61.111 0.00 0.00 45.74 4.26
2621 2747 9.022884 TGAATGATTTAGTTTGTTGATGATCCA 57.977 29.630 0.00 0.00 0.00 3.41
2627 2753 9.028284 AGACCATGAATGATTTAGTTTGTTGAT 57.972 29.630 0.00 0.00 0.00 2.57
2653 2779 2.095969 CGCAGCAAAGTAAACCATCGAA 60.096 45.455 0.00 0.00 0.00 3.71
2654 2780 1.463056 CGCAGCAAAGTAAACCATCGA 59.537 47.619 0.00 0.00 0.00 3.59
2689 2815 4.009675 TCCAATCCAATACAACTGACAGC 58.990 43.478 1.25 0.00 0.00 4.40
2717 2843 1.884579 TCTGAACCAGTAGTCGTCACC 59.115 52.381 0.00 0.00 32.61 4.02
2810 2936 5.048921 GCACACTGTCTCAACTGTAGTAGTA 60.049 44.000 0.00 0.00 39.18 1.82
2811 2937 4.261656 GCACACTGTCTCAACTGTAGTAGT 60.262 45.833 0.00 0.00 42.89 2.73
2812 2938 4.022762 AGCACACTGTCTCAACTGTAGTAG 60.023 45.833 0.00 0.00 35.98 2.57
2833 2959 4.112634 GACACTTGTTTTTCCAGGAAAGC 58.887 43.478 14.50 12.02 32.93 3.51
2842 2968 2.032924 CCCTCACCGACACTTGTTTTTC 59.967 50.000 0.00 0.00 0.00 2.29
2851 2978 0.670546 CATCACACCCTCACCGACAC 60.671 60.000 0.00 0.00 0.00 3.67
2903 3030 4.034048 AGCAATAACATAAGCACGCTACAC 59.966 41.667 0.00 0.00 0.00 2.90
2913 3043 9.740239 AGTGCAATTAATGAGCAATAACATAAG 57.260 29.630 15.09 0.00 40.35 1.73
2916 3046 8.906867 AGTAGTGCAATTAATGAGCAATAACAT 58.093 29.630 18.76 9.78 39.98 2.71
2925 3055 8.171196 CACACAACTAGTAGTGCAATTAATGAG 58.829 37.037 2.90 0.00 39.30 2.90
2998 3131 6.349363 CCCTCCAGTGTTCAAACTATTAAAGC 60.349 42.308 0.00 0.00 0.00 3.51
3003 3136 4.506802 GGACCCTCCAGTGTTCAAACTATT 60.507 45.833 0.00 0.00 36.28 1.73
3039 4085 5.061721 ACCAAACAGGACCTAATGAAACT 57.938 39.130 0.00 0.00 41.22 2.66
3049 4095 2.492088 GCCTTATGAACCAAACAGGACC 59.508 50.000 0.00 0.00 41.22 4.46
3050 4096 3.191371 CAGCCTTATGAACCAAACAGGAC 59.809 47.826 0.00 0.00 41.22 3.85
3051 4097 3.420893 CAGCCTTATGAACCAAACAGGA 58.579 45.455 0.00 0.00 41.22 3.86
3052 4098 2.493278 CCAGCCTTATGAACCAAACAGG 59.507 50.000 0.00 0.00 45.67 4.00
3053 4099 3.157087 ACCAGCCTTATGAACCAAACAG 58.843 45.455 0.00 0.00 0.00 3.16
3054 4100 3.153919 GACCAGCCTTATGAACCAAACA 58.846 45.455 0.00 0.00 0.00 2.83
3055 4101 3.153919 TGACCAGCCTTATGAACCAAAC 58.846 45.455 0.00 0.00 0.00 2.93
3056 4102 3.517296 TGACCAGCCTTATGAACCAAA 57.483 42.857 0.00 0.00 0.00 3.28
3057 4103 3.737559 ATGACCAGCCTTATGAACCAA 57.262 42.857 0.00 0.00 0.00 3.67
3058 4104 3.780294 ACTATGACCAGCCTTATGAACCA 59.220 43.478 0.00 0.00 0.00 3.67
3059 4105 4.130118 CACTATGACCAGCCTTATGAACC 58.870 47.826 0.00 0.00 0.00 3.62
3060 4106 4.130118 CCACTATGACCAGCCTTATGAAC 58.870 47.826 0.00 0.00 0.00 3.18
3061 4107 3.136443 CCCACTATGACCAGCCTTATGAA 59.864 47.826 0.00 0.00 0.00 2.57
3062 4108 2.705658 CCCACTATGACCAGCCTTATGA 59.294 50.000 0.00 0.00 0.00 2.15
3063 4109 2.224621 CCCCACTATGACCAGCCTTATG 60.225 54.545 0.00 0.00 0.00 1.90
3064 4110 2.057922 CCCCACTATGACCAGCCTTAT 58.942 52.381 0.00 0.00 0.00 1.73
3065 4111 1.009060 TCCCCACTATGACCAGCCTTA 59.991 52.381 0.00 0.00 0.00 2.69
3066 4112 0.253160 TCCCCACTATGACCAGCCTT 60.253 55.000 0.00 0.00 0.00 4.35
3067 4113 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
3068 4114 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
3069 4115 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
3070 4116 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
3071 4117 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
3072 4118 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
3073 4119 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
3074 4120 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
3075 4121 7.061688 ACTAGTCTAAGTTACTCCCCACTATG 58.938 42.308 0.00 0.00 0.00 2.23
3076 4122 7.223472 ACTAGTCTAAGTTACTCCCCACTAT 57.777 40.000 0.00 0.00 0.00 2.12
3077 4123 6.649041 ACTAGTCTAAGTTACTCCCCACTA 57.351 41.667 0.00 0.00 0.00 2.74
3078 4124 5.533333 ACTAGTCTAAGTTACTCCCCACT 57.467 43.478 0.00 0.00 0.00 4.00
3079 4125 6.660949 TGTTACTAGTCTAAGTTACTCCCCAC 59.339 42.308 0.00 0.00 31.82 4.61
3080 4126 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
3081 4127 7.894753 ATGTTACTAGTCTAAGTTACTCCCC 57.105 40.000 0.00 0.00 31.82 4.81
3082 4128 9.401058 TGTATGTTACTAGTCTAAGTTACTCCC 57.599 37.037 0.00 0.00 31.82 4.30
3118 4164 9.364653 CCCACTATAAAGGTAGTAACATAGACT 57.635 37.037 0.00 0.00 33.29 3.24
3119 4165 9.140874 ACCCACTATAAAGGTAGTAACATAGAC 57.859 37.037 0.00 0.00 33.29 2.59
3130 4176 7.727186 CCTATGACACTACCCACTATAAAGGTA 59.273 40.741 0.00 0.00 35.02 3.08
3131 4177 6.553852 CCTATGACACTACCCACTATAAAGGT 59.446 42.308 0.00 0.00 37.69 3.50
3132 4178 6.553852 ACCTATGACACTACCCACTATAAAGG 59.446 42.308 0.00 0.00 0.00 3.11
3133 4179 7.069578 ACACCTATGACACTACCCACTATAAAG 59.930 40.741 0.00 0.00 0.00 1.85
3134 4180 6.899075 ACACCTATGACACTACCCACTATAAA 59.101 38.462 0.00 0.00 0.00 1.40
3135 4181 6.322969 CACACCTATGACACTACCCACTATAA 59.677 42.308 0.00 0.00 0.00 0.98
3136 4182 5.831525 CACACCTATGACACTACCCACTATA 59.168 44.000 0.00 0.00 0.00 1.31
3137 4183 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
3138 4184 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
3139 4185 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
3140 4186 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
3141 4187 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
3142 4188 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
3143 4189 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
3144 4190 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
3145 4191 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
3146 4192 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
3147 4193 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
3148 4194 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
3149 4195 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
3150 4196 5.424757 GCAACTATGTTACCACACCTATGA 58.575 41.667 0.00 0.00 35.03 2.15
3151 4197 4.574828 GGCAACTATGTTACCACACCTATG 59.425 45.833 0.00 0.00 35.03 2.23
3152 4198 4.777463 GGCAACTATGTTACCACACCTAT 58.223 43.478 0.00 0.00 35.03 2.57
3153 4199 4.210724 GGCAACTATGTTACCACACCTA 57.789 45.455 0.00 0.00 35.03 3.08
3154 4200 3.067684 GGCAACTATGTTACCACACCT 57.932 47.619 0.00 0.00 35.03 4.00
3169 4215 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
3170 4216 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
3171 4217 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
3172 4218 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
3183 4229 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
3184 4230 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
3185 4231 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
3186 4232 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
3187 4233 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
3188 4234 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
3189 4235 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
3190 4236 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
3191 4237 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
3192 4238 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
3193 4239 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
3194 4240 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
3195 4241 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
3196 4242 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
3197 4243 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
3198 4244 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
3199 4245 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
3200 4246 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
3201 4247 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
3202 4248 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
3203 4249 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
3204 4250 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
3205 4251 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
3206 4252 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
3207 4253 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
3208 4254 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
3209 4255 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
3210 4256 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
3211 4257 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
3212 4258 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
3213 4259 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
3214 4260 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
3233 4279 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
3234 4280 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
3235 4281 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
3236 4282 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
3237 4283 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
3238 4284 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
3239 4285 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
3240 4286 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
3241 4287 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
3242 4288 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
3243 4289 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
3244 4290 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
3245 4291 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
3246 4292 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
3247 4293 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
3248 4294 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
3249 4295 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
3250 4296 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
3251 4297 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
3252 4298 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
3253 4299 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
3254 4300 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
3255 4301 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
3256 4302 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
3257 4303 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
3258 4304 5.185454 TGATGTGGCAAGTAGTTAATGAGG 58.815 41.667 0.00 0.00 0.00 3.86
3259 4305 6.539826 TGATGATGTGGCAAGTAGTTAATGAG 59.460 38.462 0.00 0.00 0.00 2.90
3260 4306 6.413892 TGATGATGTGGCAAGTAGTTAATGA 58.586 36.000 0.00 0.00 0.00 2.57
3261 4307 6.682423 TGATGATGTGGCAAGTAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
3262 4308 7.886629 AATGATGATGTGGCAAGTAGTTAAT 57.113 32.000 0.00 0.00 0.00 1.40
3263 4309 7.701539 AAATGATGATGTGGCAAGTAGTTAA 57.298 32.000 0.00 0.00 0.00 2.01
3264 4310 7.701539 AAAATGATGATGTGGCAAGTAGTTA 57.298 32.000 0.00 0.00 0.00 2.24
3265 4311 6.594788 AAAATGATGATGTGGCAAGTAGTT 57.405 33.333 0.00 0.00 0.00 2.24
3266 4312 6.392354 CAAAAATGATGATGTGGCAAGTAGT 58.608 36.000 0.00 0.00 0.00 2.73
3267 4313 5.290158 GCAAAAATGATGATGTGGCAAGTAG 59.710 40.000 0.00 0.00 0.00 2.57
3268 4314 5.047164 AGCAAAAATGATGATGTGGCAAGTA 60.047 36.000 0.00 0.00 0.00 2.24
3269 4315 3.998341 GCAAAAATGATGATGTGGCAAGT 59.002 39.130 0.00 0.00 0.00 3.16
3270 4316 4.250464 AGCAAAAATGATGATGTGGCAAG 58.750 39.130 0.00 0.00 0.00 4.01
3271 4317 4.274602 AGCAAAAATGATGATGTGGCAA 57.725 36.364 0.00 0.00 0.00 4.52
3272 4318 3.965379 AGCAAAAATGATGATGTGGCA 57.035 38.095 0.00 0.00 0.00 4.92
3273 4319 5.813672 ACATAAGCAAAAATGATGATGTGGC 59.186 36.000 0.00 0.00 0.00 5.01
3274 4320 7.229228 CACATAAGCAAAAATGATGATGTGG 57.771 36.000 14.08 0.34 39.34 4.17
3275 4321 6.237996 GCCACATAAGCAAAAATGATGATGTG 60.238 38.462 14.69 14.69 41.53 3.21
3276 4322 5.813672 GCCACATAAGCAAAAATGATGATGT 59.186 36.000 0.00 0.00 0.00 3.06
3277 4323 5.813157 TGCCACATAAGCAAAAATGATGATG 59.187 36.000 0.00 0.00 37.28 3.07
3278 4324 5.979993 TGCCACATAAGCAAAAATGATGAT 58.020 33.333 0.00 0.00 37.28 2.45
3279 4325 5.402997 TGCCACATAAGCAAAAATGATGA 57.597 34.783 0.00 0.00 37.28 2.92
3280 4326 6.046593 AGATGCCACATAAGCAAAAATGATG 58.953 36.000 0.00 0.00 44.83 3.07
3281 4327 6.229936 AGATGCCACATAAGCAAAAATGAT 57.770 33.333 0.00 0.00 44.83 2.45
3282 4328 5.664294 AGATGCCACATAAGCAAAAATGA 57.336 34.783 0.00 0.00 44.83 2.57
3283 4329 6.982141 ACATAGATGCCACATAAGCAAAAATG 59.018 34.615 0.00 0.00 44.83 2.32
3284 4330 7.116075 ACATAGATGCCACATAAGCAAAAAT 57.884 32.000 0.00 0.00 44.83 1.82
3285 4331 6.528537 ACATAGATGCCACATAAGCAAAAA 57.471 33.333 0.00 0.00 44.83 1.94
3286 4332 6.528537 AACATAGATGCCACATAAGCAAAA 57.471 33.333 0.00 0.00 44.83 2.44
3287 4333 6.828273 AGTAACATAGATGCCACATAAGCAAA 59.172 34.615 0.00 0.00 44.83 3.68
3288 4334 6.356556 AGTAACATAGATGCCACATAAGCAA 58.643 36.000 0.00 0.00 44.83 3.91
3289 4335 5.928976 AGTAACATAGATGCCACATAAGCA 58.071 37.500 0.00 0.00 45.94 3.91
3290 4336 8.037758 AGATAGTAACATAGATGCCACATAAGC 58.962 37.037 0.00 0.00 0.00 3.09
3294 4340 9.040259 ACATAGATAGTAACATAGATGCCACAT 57.960 33.333 0.00 0.00 0.00 3.21
3295 4341 8.422577 ACATAGATAGTAACATAGATGCCACA 57.577 34.615 0.00 0.00 0.00 4.17
3309 4355 9.736414 GTCATAGTGGGAGTAACATAGATAGTA 57.264 37.037 0.00 0.00 0.00 1.82
3310 4356 7.670559 GGTCATAGTGGGAGTAACATAGATAGT 59.329 40.741 0.00 0.00 0.00 2.12
3311 4357 7.670140 TGGTCATAGTGGGAGTAACATAGATAG 59.330 40.741 0.00 0.00 0.00 2.08
3312 4358 7.532199 TGGTCATAGTGGGAGTAACATAGATA 58.468 38.462 0.00 0.00 0.00 1.98
3313 4359 6.382087 TGGTCATAGTGGGAGTAACATAGAT 58.618 40.000 0.00 0.00 0.00 1.98
3314 4360 5.773091 TGGTCATAGTGGGAGTAACATAGA 58.227 41.667 0.00 0.00 0.00 1.98
3315 4361 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
3316 4362 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
3317 4363 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
3318 4364 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
3319 4365 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
3320 4366 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
3321 4367 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
3322 4368 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
3323 4369 2.088104 TAGGCTGGTCATAGTGGGAG 57.912 55.000 0.00 0.00 0.00 4.30
3324 4370 2.292918 ACTTAGGCTGGTCATAGTGGGA 60.293 50.000 0.00 0.00 0.00 4.37
3325 4371 2.103263 GACTTAGGCTGGTCATAGTGGG 59.897 54.545 14.58 0.00 33.19 4.61
3326 4372 2.103263 GGACTTAGGCTGGTCATAGTGG 59.897 54.545 18.99 0.00 34.49 4.00
3327 4373 3.034635 AGGACTTAGGCTGGTCATAGTG 58.965 50.000 18.99 0.00 34.49 2.74
3328 4374 3.406512 AGGACTTAGGCTGGTCATAGT 57.593 47.619 18.99 4.90 34.49 2.12
3329 4375 5.010213 GTCTTAGGACTTAGGCTGGTCATAG 59.990 48.000 18.99 13.64 39.24 2.23
3330 4376 4.894114 GTCTTAGGACTTAGGCTGGTCATA 59.106 45.833 18.99 15.06 39.24 2.15
3331 4377 3.707102 GTCTTAGGACTTAGGCTGGTCAT 59.293 47.826 18.99 15.85 39.24 3.06
3332 4378 3.097614 GTCTTAGGACTTAGGCTGGTCA 58.902 50.000 18.99 2.84 39.24 4.02
3333 4379 3.804786 GTCTTAGGACTTAGGCTGGTC 57.195 52.381 12.10 12.10 39.24 4.02
3355 4401 3.117663 CCCCCACTATGCTAGCCTAAAAA 60.118 47.826 13.29 0.00 0.00 1.94
3356 4402 2.441750 CCCCCACTATGCTAGCCTAAAA 59.558 50.000 13.29 0.00 0.00 1.52
3357 4403 2.054799 CCCCCACTATGCTAGCCTAAA 58.945 52.381 13.29 0.00 0.00 1.85
3358 4404 1.061657 ACCCCCACTATGCTAGCCTAA 60.062 52.381 13.29 0.00 0.00 2.69
3359 4405 0.566176 ACCCCCACTATGCTAGCCTA 59.434 55.000 13.29 5.85 0.00 3.93
3360 4406 0.566176 TACCCCCACTATGCTAGCCT 59.434 55.000 13.29 4.74 0.00 4.58
3361 4407 1.071857 GTTACCCCCACTATGCTAGCC 59.928 57.143 13.29 0.00 0.00 3.93
3362 4408 2.047830 AGTTACCCCCACTATGCTAGC 58.952 52.381 8.10 8.10 0.00 3.42
3363 4409 4.283722 CCTAAGTTACCCCCACTATGCTAG 59.716 50.000 0.00 0.00 0.00 3.42
3364 4410 4.228824 CCTAAGTTACCCCCACTATGCTA 58.771 47.826 0.00 0.00 0.00 3.49
3365 4411 3.046374 CCTAAGTTACCCCCACTATGCT 58.954 50.000 0.00 0.00 0.00 3.79
3366 4412 2.775960 ACCTAAGTTACCCCCACTATGC 59.224 50.000 0.00 0.00 0.00 3.14
3367 4413 5.214293 ACTACCTAAGTTACCCCCACTATG 58.786 45.833 0.00 0.00 33.35 2.23
3368 4414 5.494136 ACTACCTAAGTTACCCCCACTAT 57.506 43.478 0.00 0.00 33.35 2.12
3369 4415 4.972999 ACTACCTAAGTTACCCCCACTA 57.027 45.455 0.00 0.00 33.35 2.74
3370 4416 3.860647 ACTACCTAAGTTACCCCCACT 57.139 47.619 0.00 0.00 33.35 4.00
3371 4417 5.026121 AGTTACTACCTAAGTTACCCCCAC 58.974 45.833 0.00 0.00 38.28 4.61
3372 4418 5.289652 AGTTACTACCTAAGTTACCCCCA 57.710 43.478 0.00 0.00 38.28 4.96
3373 4419 7.180229 TGTTAAGTTACTACCTAAGTTACCCCC 59.820 40.741 0.00 0.00 38.28 5.40
3374 4420 8.035394 GTGTTAAGTTACTACCTAAGTTACCCC 58.965 40.741 0.00 0.00 38.28 4.95
3375 4421 8.585018 TGTGTTAAGTTACTACCTAAGTTACCC 58.415 37.037 0.00 0.00 38.28 3.69
3379 4425 8.316946 GGGATGTGTTAAGTTACTACCTAAGTT 58.683 37.037 0.00 0.00 39.80 2.66
3380 4426 7.455638 TGGGATGTGTTAAGTTACTACCTAAGT 59.544 37.037 0.00 0.00 42.62 2.24
3381 4427 7.844009 TGGGATGTGTTAAGTTACTACCTAAG 58.156 38.462 0.00 0.00 0.00 2.18
3382 4428 7.795534 TGGGATGTGTTAAGTTACTACCTAA 57.204 36.000 0.00 0.00 0.00 2.69
3383 4429 7.675195 TCTTGGGATGTGTTAAGTTACTACCTA 59.325 37.037 0.00 0.00 0.00 3.08
3384 4430 6.499350 TCTTGGGATGTGTTAAGTTACTACCT 59.501 38.462 0.00 0.00 0.00 3.08
3385 4431 6.592994 GTCTTGGGATGTGTTAAGTTACTACC 59.407 42.308 0.00 0.00 0.00 3.18
3386 4432 7.156673 TGTCTTGGGATGTGTTAAGTTACTAC 58.843 38.462 0.00 0.00 0.00 2.73
3387 4433 7.305813 TGTCTTGGGATGTGTTAAGTTACTA 57.694 36.000 0.00 0.00 0.00 1.82
3388 4434 6.182507 TGTCTTGGGATGTGTTAAGTTACT 57.817 37.500 0.00 0.00 0.00 2.24
3389 4435 6.870971 TTGTCTTGGGATGTGTTAAGTTAC 57.129 37.500 0.00 0.00 0.00 2.50
3390 4436 8.472007 AATTTGTCTTGGGATGTGTTAAGTTA 57.528 30.769 0.00 0.00 0.00 2.24
3391 4437 6.976934 ATTTGTCTTGGGATGTGTTAAGTT 57.023 33.333 0.00 0.00 0.00 2.66
3392 4438 6.976934 AATTTGTCTTGGGATGTGTTAAGT 57.023 33.333 0.00 0.00 0.00 2.24
3393 4439 6.146021 GCAAATTTGTCTTGGGATGTGTTAAG 59.854 38.462 19.03 0.00 0.00 1.85
3394 4440 5.988561 GCAAATTTGTCTTGGGATGTGTTAA 59.011 36.000 19.03 0.00 0.00 2.01
3395 4441 5.304101 AGCAAATTTGTCTTGGGATGTGTTA 59.696 36.000 19.03 0.00 0.00 2.41
3396 4442 4.101430 AGCAAATTTGTCTTGGGATGTGTT 59.899 37.500 19.03 0.00 0.00 3.32
3397 4443 3.642848 AGCAAATTTGTCTTGGGATGTGT 59.357 39.130 19.03 0.00 0.00 3.72
3398 4444 4.261578 AGCAAATTTGTCTTGGGATGTG 57.738 40.909 19.03 0.00 0.00 3.21
3399 4445 4.961438 AAGCAAATTTGTCTTGGGATGT 57.039 36.364 19.03 0.00 0.00 3.06
3400 4446 6.311935 CACATAAGCAAATTTGTCTTGGGATG 59.688 38.462 25.23 22.65 0.00 3.51
3401 4447 6.400568 CACATAAGCAAATTTGTCTTGGGAT 58.599 36.000 25.23 15.05 0.00 3.85
3402 4448 5.279406 CCACATAAGCAAATTTGTCTTGGGA 60.279 40.000 25.23 13.95 0.00 4.37
3403 4449 4.931002 CCACATAAGCAAATTTGTCTTGGG 59.069 41.667 25.23 20.65 0.00 4.12
3404 4450 4.389687 GCCACATAAGCAAATTTGTCTTGG 59.610 41.667 25.23 21.28 0.00 3.61
3405 4451 4.989797 TGCCACATAAGCAAATTTGTCTTG 59.010 37.500 25.23 17.81 37.28 3.02
3406 4452 5.212532 TGCCACATAAGCAAATTTGTCTT 57.787 34.783 22.55 22.55 37.28 3.01
3407 4453 4.870123 TGCCACATAAGCAAATTTGTCT 57.130 36.364 19.03 13.38 37.28 3.41
3416 4462 7.637631 TCATTAAATACTTGCCACATAAGCA 57.362 32.000 0.00 0.00 38.81 3.91
3417 4463 8.352201 TCATCATTAAATACTTGCCACATAAGC 58.648 33.333 0.00 0.00 0.00 3.09
3421 4467 8.970020 TCTTTCATCATTAAATACTTGCCACAT 58.030 29.630 0.00 0.00 0.00 3.21
3422 4468 8.347004 TCTTTCATCATTAAATACTTGCCACA 57.653 30.769 0.00 0.00 0.00 4.17
3423 4469 7.917505 CCTCTTTCATCATTAAATACTTGCCAC 59.082 37.037 0.00 0.00 0.00 5.01
3424 4470 7.615365 ACCTCTTTCATCATTAAATACTTGCCA 59.385 33.333 0.00 0.00 0.00 4.92
3425 4471 7.917505 CACCTCTTTCATCATTAAATACTTGCC 59.082 37.037 0.00 0.00 0.00 4.52
3426 4472 7.433425 GCACCTCTTTCATCATTAAATACTTGC 59.567 37.037 0.00 0.00 0.00 4.01
3427 4473 8.680903 AGCACCTCTTTCATCATTAAATACTTG 58.319 33.333 0.00 0.00 0.00 3.16
3428 4474 8.814038 AGCACCTCTTTCATCATTAAATACTT 57.186 30.769 0.00 0.00 0.00 2.24
3429 4475 8.680903 CAAGCACCTCTTTCATCATTAAATACT 58.319 33.333 0.00 0.00 31.27 2.12
3430 4476 8.462016 ACAAGCACCTCTTTCATCATTAAATAC 58.538 33.333 0.00 0.00 31.27 1.89
3431 4477 8.461222 CACAAGCACCTCTTTCATCATTAAATA 58.539 33.333 0.00 0.00 31.27 1.40
3432 4478 7.318141 CACAAGCACCTCTTTCATCATTAAAT 58.682 34.615 0.00 0.00 31.27 1.40
3433 4479 6.294675 CCACAAGCACCTCTTTCATCATTAAA 60.295 38.462 0.00 0.00 31.27 1.52
3434 4480 5.183713 CCACAAGCACCTCTTTCATCATTAA 59.816 40.000 0.00 0.00 31.27 1.40
3435 4481 4.701651 CCACAAGCACCTCTTTCATCATTA 59.298 41.667 0.00 0.00 31.27 1.90
3436 4482 3.508793 CCACAAGCACCTCTTTCATCATT 59.491 43.478 0.00 0.00 31.27 2.57
3437 4483 3.087031 CCACAAGCACCTCTTTCATCAT 58.913 45.455 0.00 0.00 31.27 2.45
3438 4484 2.158623 ACCACAAGCACCTCTTTCATCA 60.159 45.455 0.00 0.00 31.27 3.07
3439 4485 2.508526 ACCACAAGCACCTCTTTCATC 58.491 47.619 0.00 0.00 31.27 2.92
3440 4486 2.664402 ACCACAAGCACCTCTTTCAT 57.336 45.000 0.00 0.00 31.27 2.57
3441 4487 3.211045 GTTACCACAAGCACCTCTTTCA 58.789 45.455 0.00 0.00 31.27 2.69
3442 4488 3.211045 TGTTACCACAAGCACCTCTTTC 58.789 45.455 0.00 0.00 31.27 2.62
3443 4489 3.290948 TGTTACCACAAGCACCTCTTT 57.709 42.857 0.00 0.00 31.27 2.52
3444 4490 3.508845 ATGTTACCACAAGCACCTCTT 57.491 42.857 0.00 0.00 36.16 2.85
3445 4491 4.634012 TTATGTTACCACAAGCACCTCT 57.366 40.909 0.00 0.00 36.16 3.69
3446 4492 6.542370 ACATATTATGTTACCACAAGCACCTC 59.458 38.462 3.40 0.00 41.63 3.85
3447 4493 6.423182 ACATATTATGTTACCACAAGCACCT 58.577 36.000 3.40 0.00 41.63 4.00
3448 4494 6.693315 ACATATTATGTTACCACAAGCACC 57.307 37.500 3.40 0.00 41.63 5.01
3470 4516 3.554731 GGGAAGCGCTATGTTACAGTAAC 59.445 47.826 12.05 15.58 39.11 2.50
3471 4517 3.735820 CGGGAAGCGCTATGTTACAGTAA 60.736 47.826 12.05 0.00 0.00 2.24
3472 4518 2.223641 CGGGAAGCGCTATGTTACAGTA 60.224 50.000 12.05 0.00 0.00 2.74
3473 4519 1.470979 CGGGAAGCGCTATGTTACAGT 60.471 52.381 12.05 0.00 0.00 3.55
3474 4520 1.202371 TCGGGAAGCGCTATGTTACAG 60.202 52.381 12.05 0.00 0.00 2.74
3475 4521 0.818938 TCGGGAAGCGCTATGTTACA 59.181 50.000 12.05 0.00 0.00 2.41
3476 4522 1.488527 CTCGGGAAGCGCTATGTTAC 58.511 55.000 12.05 0.00 0.00 2.50
3477 4523 0.387929 CCTCGGGAAGCGCTATGTTA 59.612 55.000 12.05 0.00 0.00 2.41
3478 4524 1.144057 CCTCGGGAAGCGCTATGTT 59.856 57.895 12.05 0.00 0.00 2.71
3479 4525 2.815308 CCTCGGGAAGCGCTATGT 59.185 61.111 12.05 0.00 0.00 2.29
3480 4526 2.663188 GCCTCGGGAAGCGCTATG 60.663 66.667 12.05 0.24 0.00 2.23
3481 4527 2.252072 TTTGCCTCGGGAAGCGCTAT 62.252 55.000 12.05 0.00 0.00 2.97
3482 4528 2.252072 ATTTGCCTCGGGAAGCGCTA 62.252 55.000 12.05 0.00 0.00 4.26
3483 4529 3.628646 ATTTGCCTCGGGAAGCGCT 62.629 57.895 2.64 2.64 0.00 5.92
3484 4530 3.134127 ATTTGCCTCGGGAAGCGC 61.134 61.111 0.00 0.00 0.00 5.92
3485 4531 1.709147 CTCATTTGCCTCGGGAAGCG 61.709 60.000 0.00 0.00 0.00 4.68
3486 4532 0.678048 ACTCATTTGCCTCGGGAAGC 60.678 55.000 0.00 0.00 0.00 3.86
3487 4533 1.065854 AGACTCATTTGCCTCGGGAAG 60.066 52.381 0.00 0.00 0.00 3.46
3488 4534 0.984230 AGACTCATTTGCCTCGGGAA 59.016 50.000 0.00 0.00 0.00 3.97
3489 4535 1.860641 TAGACTCATTTGCCTCGGGA 58.139 50.000 0.00 0.00 0.00 5.14
3490 4536 2.918712 ATAGACTCATTTGCCTCGGG 57.081 50.000 0.00 0.00 0.00 5.14
3491 4537 3.743396 GCTTATAGACTCATTTGCCTCGG 59.257 47.826 0.00 0.00 0.00 4.63
3492 4538 4.626042 AGCTTATAGACTCATTTGCCTCG 58.374 43.478 0.00 0.00 0.00 4.63
3493 4539 9.712305 TTATTAGCTTATAGACTCATTTGCCTC 57.288 33.333 0.00 0.00 0.00 4.70
3537 4583 9.512435 CGTAGTGCAAAGTAACATAATACTAGT 57.488 33.333 0.00 0.00 35.09 2.57
3538 4584 8.965172 CCGTAGTGCAAAGTAACATAATACTAG 58.035 37.037 0.00 0.00 35.09 2.57
3539 4585 8.685427 TCCGTAGTGCAAAGTAACATAATACTA 58.315 33.333 0.00 0.00 35.09 1.82
3540 4586 7.549839 TCCGTAGTGCAAAGTAACATAATACT 58.450 34.615 0.00 0.00 37.73 2.12
3541 4587 7.042925 CCTCCGTAGTGCAAAGTAACATAATAC 60.043 40.741 0.00 0.00 0.00 1.89
3542 4588 6.982141 CCTCCGTAGTGCAAAGTAACATAATA 59.018 38.462 0.00 0.00 0.00 0.98
3543 4589 5.815740 CCTCCGTAGTGCAAAGTAACATAAT 59.184 40.000 0.00 0.00 0.00 1.28
3544 4590 5.172934 CCTCCGTAGTGCAAAGTAACATAA 58.827 41.667 0.00 0.00 0.00 1.90
3545 4591 4.221262 ACCTCCGTAGTGCAAAGTAACATA 59.779 41.667 0.00 0.00 0.00 2.29
3546 4592 3.007614 ACCTCCGTAGTGCAAAGTAACAT 59.992 43.478 0.00 0.00 0.00 2.71
3547 4593 2.366266 ACCTCCGTAGTGCAAAGTAACA 59.634 45.455 0.00 0.00 0.00 2.41
3548 4594 3.036075 ACCTCCGTAGTGCAAAGTAAC 57.964 47.619 0.00 0.00 0.00 2.50
3549 4595 4.445452 CTACCTCCGTAGTGCAAAGTAA 57.555 45.455 0.00 0.00 37.74 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.