Multiple sequence alignment - TraesCS7A01G392800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G392800 chr7A 100.000 4487 0 0 1 4487 570115071 570119557 0.000000e+00 8287.0
1 TraesCS7A01G392800 chr7A 82.778 180 26 5 4312 4487 307960179 307960001 6.010000e-34 156.0
2 TraesCS7A01G392800 chr7D 89.480 2633 123 68 625 3142 502876622 502879215 0.000000e+00 3186.0
3 TraesCS7A01G392800 chr7D 94.595 444 19 3 3153 3596 502879299 502879737 0.000000e+00 682.0
4 TraesCS7A01G392800 chr7D 83.799 179 25 4 4312 4487 274697717 274697540 2.780000e-37 167.0
5 TraesCS7A01G392800 chr7B 90.080 2490 161 54 1806 4229 531659225 531661694 0.000000e+00 3151.0
6 TraesCS7A01G392800 chr7B 91.892 444 33 1 86 529 531657007 531657447 6.380000e-173 617.0
7 TraesCS7A01G392800 chr7B 84.599 474 34 22 808 1264 531658120 531658571 6.890000e-118 435.0
8 TraesCS7A01G392800 chr7B 83.240 179 26 4 4312 4487 263109901 263110078 1.290000e-35 161.0
9 TraesCS7A01G392800 chrUn 83.643 269 33 6 2874 3142 371328222 371327965 4.480000e-60 243.0
10 TraesCS7A01G392800 chr5A 83.643 269 33 6 2874 3142 589363545 589363288 4.480000e-60 243.0
11 TraesCS7A01G392800 chr2B 83.969 262 31 6 2881 3142 765085372 765085122 1.610000e-59 241.0
12 TraesCS7A01G392800 chr2B 82.292 192 29 5 4299 4487 494402000 494401811 1.290000e-35 161.0
13 TraesCS7A01G392800 chr5D 82.313 294 35 11 2862 3142 555463709 555463420 5.800000e-59 239.0
14 TraesCS7A01G392800 chr3B 81.419 296 41 8 2859 3142 259415153 259415446 3.490000e-56 230.0
15 TraesCS7A01G392800 chr2D 82.812 192 28 5 4299 4487 422089825 422089636 2.780000e-37 167.0
16 TraesCS7A01G392800 chr1D 81.443 194 29 7 4299 4487 309072744 309072935 7.770000e-33 152.0
17 TraesCS7A01G392800 chr1B 83.041 171 23 5 4319 4487 418804179 418804345 2.800000e-32 150.0
18 TraesCS7A01G392800 chr4D 80.729 192 34 3 4299 4487 98888119 98888310 3.620000e-31 147.0
19 TraesCS7A01G392800 chr4D 97.059 34 1 0 2908 2941 500040318 500040351 1.740000e-04 58.4
20 TraesCS7A01G392800 chr6B 80.612 196 27 9 4299 4487 548131149 548131340 1.680000e-29 141.0
21 TraesCS7A01G392800 chr3D 97.059 34 1 0 2908 2941 281085348 281085381 1.740000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G392800 chr7A 570115071 570119557 4486 False 8287 8287 100.0000 1 4487 1 chr7A.!!$F1 4486
1 TraesCS7A01G392800 chr7D 502876622 502879737 3115 False 1934 3186 92.0375 625 3596 2 chr7D.!!$F1 2971
2 TraesCS7A01G392800 chr7B 531657007 531661694 4687 False 1401 3151 88.8570 86 4229 3 chr7B.!!$F2 4143

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 798 0.178964 CACCATCCACCCACCAAAGT 60.179 55.0 0.0 0.0 0.00 2.66 F
2163 2872 0.033920 AGATGCTGTTGCTGTCGTGA 59.966 50.0 0.0 0.0 40.48 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2187 2915 0.106519 GCCCTGCCATATCAACACCT 60.107 55.0 0.00 0.00 0.0 4.00 R
4081 4900 0.103208 CTCAGTGCTCACCGGGATAC 59.897 60.0 6.32 3.19 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.499737 CTGGCCGCACGTTCCATC 61.500 66.667 0.00 0.00 0.00 3.51
35 36 3.958147 CTGGCCGCACGTTCCATCT 62.958 63.158 0.00 0.00 0.00 2.90
36 37 3.195698 GGCCGCACGTTCCATCTC 61.196 66.667 0.00 0.00 0.00 2.75
37 38 3.554692 GCCGCACGTTCCATCTCG 61.555 66.667 0.00 0.00 0.00 4.04
38 39 2.126071 CCGCACGTTCCATCTCGT 60.126 61.111 0.00 0.00 40.99 4.18
39 40 2.158959 CCGCACGTTCCATCTCGTC 61.159 63.158 0.00 0.00 38.23 4.20
40 41 1.443702 CGCACGTTCCATCTCGTCA 60.444 57.895 0.00 0.00 38.23 4.35
41 42 1.006825 CGCACGTTCCATCTCGTCAA 61.007 55.000 0.00 0.00 38.23 3.18
42 43 0.716108 GCACGTTCCATCTCGTCAAG 59.284 55.000 0.00 0.00 38.23 3.02
43 44 1.935300 GCACGTTCCATCTCGTCAAGT 60.935 52.381 0.00 0.00 38.23 3.16
44 45 2.404215 CACGTTCCATCTCGTCAAGTT 58.596 47.619 0.00 0.00 38.23 2.66
45 46 2.155732 CACGTTCCATCTCGTCAAGTTG 59.844 50.000 0.00 0.00 38.23 3.16
46 47 2.223971 ACGTTCCATCTCGTCAAGTTGT 60.224 45.455 2.11 0.00 35.30 3.32
47 48 3.005050 ACGTTCCATCTCGTCAAGTTGTA 59.995 43.478 2.11 0.00 35.30 2.41
48 49 3.364023 CGTTCCATCTCGTCAAGTTGTAC 59.636 47.826 2.11 0.00 0.00 2.90
49 50 4.304110 GTTCCATCTCGTCAAGTTGTACA 58.696 43.478 2.11 0.00 0.00 2.90
50 51 3.909430 TCCATCTCGTCAAGTTGTACAC 58.091 45.455 2.11 0.00 0.00 2.90
51 52 3.572682 TCCATCTCGTCAAGTTGTACACT 59.427 43.478 2.11 0.00 37.30 3.55
52 53 3.675225 CCATCTCGTCAAGTTGTACACTG 59.325 47.826 2.11 0.00 35.12 3.66
53 54 4.299155 CATCTCGTCAAGTTGTACACTGT 58.701 43.478 2.11 0.00 35.12 3.55
54 55 4.380841 TCTCGTCAAGTTGTACACTGTT 57.619 40.909 2.11 0.00 35.12 3.16
55 56 4.109766 TCTCGTCAAGTTGTACACTGTTG 58.890 43.478 2.11 0.00 35.12 3.33
56 57 2.605818 TCGTCAAGTTGTACACTGTTGC 59.394 45.455 2.11 0.00 35.12 4.17
57 58 2.350192 CGTCAAGTTGTACACTGTTGCA 59.650 45.455 2.11 0.00 35.12 4.08
58 59 3.680789 GTCAAGTTGTACACTGTTGCAC 58.319 45.455 2.11 0.00 35.12 4.57
59 60 2.680841 TCAAGTTGTACACTGTTGCACC 59.319 45.455 2.11 0.00 35.12 5.01
60 61 1.295792 AGTTGTACACTGTTGCACCG 58.704 50.000 0.00 0.00 32.83 4.94
61 62 1.011333 GTTGTACACTGTTGCACCGT 58.989 50.000 0.00 0.00 0.00 4.83
62 63 1.004292 GTTGTACACTGTTGCACCGTC 60.004 52.381 0.00 0.00 0.00 4.79
63 64 0.462375 TGTACACTGTTGCACCGTCT 59.538 50.000 0.00 0.00 0.00 4.18
64 65 0.859232 GTACACTGTTGCACCGTCTG 59.141 55.000 0.00 0.00 0.00 3.51
72 73 3.562635 GCACCGTCTGCTAACCAC 58.437 61.111 0.00 0.00 43.33 4.16
73 74 2.033194 GCACCGTCTGCTAACCACC 61.033 63.158 0.00 0.00 43.33 4.61
74 75 1.736645 CACCGTCTGCTAACCACCG 60.737 63.158 0.00 0.00 0.00 4.94
75 76 2.125673 CCGTCTGCTAACCACCGG 60.126 66.667 0.00 0.00 0.00 5.28
76 77 2.642254 CCGTCTGCTAACCACCGGA 61.642 63.158 9.46 0.00 35.78 5.14
77 78 1.445582 CGTCTGCTAACCACCGGAC 60.446 63.158 9.46 0.00 34.72 4.79
78 79 1.079336 GTCTGCTAACCACCGGACC 60.079 63.158 9.46 0.00 32.48 4.46
79 80 1.534476 TCTGCTAACCACCGGACCA 60.534 57.895 9.46 0.00 0.00 4.02
80 81 0.907704 TCTGCTAACCACCGGACCAT 60.908 55.000 9.46 0.00 0.00 3.55
81 82 0.462047 CTGCTAACCACCGGACCATC 60.462 60.000 9.46 0.00 0.00 3.51
82 83 1.195442 TGCTAACCACCGGACCATCA 61.195 55.000 9.46 0.00 0.00 3.07
83 84 0.462047 GCTAACCACCGGACCATCAG 60.462 60.000 9.46 0.00 0.00 2.90
84 85 0.462047 CTAACCACCGGACCATCAGC 60.462 60.000 9.46 0.00 0.00 4.26
168 169 8.890410 TCAAGTACCTACTTACTACATTCCTT 57.110 34.615 0.00 0.00 44.19 3.36
179 180 8.962679 ACTTACTACATTCCTTGAAACAAACAA 58.037 29.630 0.00 0.00 0.00 2.83
180 181 9.796120 CTTACTACATTCCTTGAAACAAACAAA 57.204 29.630 0.00 0.00 0.00 2.83
181 182 9.575783 TTACTACATTCCTTGAAACAAACAAAC 57.424 29.630 0.00 0.00 0.00 2.93
182 183 7.607250 ACTACATTCCTTGAAACAAACAAACA 58.393 30.769 0.00 0.00 0.00 2.83
218 219 6.596621 ACTCTAAAGGTTTCTTTCTCAAGCT 58.403 36.000 0.00 0.00 41.82 3.74
231 232 0.603439 TCAAGCTGCTGCATTGACGA 60.603 50.000 18.42 1.92 42.74 4.20
236 237 0.524816 CTGCTGCATTGACGATTGGC 60.525 55.000 1.31 0.00 0.00 4.52
245 246 0.959867 TGACGATTGGCCACATGGTG 60.960 55.000 3.88 0.00 37.57 4.17
249 250 0.532115 GATTGGCCACATGGTGAACC 59.468 55.000 3.88 0.00 35.23 3.62
259 260 2.166829 CATGGTGAACCGGGAATCAAA 58.833 47.619 6.32 0.00 39.43 2.69
261 262 0.885879 GGTGAACCGGGAATCAAACC 59.114 55.000 6.32 2.35 0.00 3.27
263 264 1.539827 GTGAACCGGGAATCAAACCAG 59.460 52.381 6.32 0.00 0.00 4.00
267 268 1.185315 CCGGGAATCAAACCAGCAAT 58.815 50.000 0.00 0.00 0.00 3.56
274 275 4.380867 GGAATCAAACCAGCAATTGACGAT 60.381 41.667 10.34 0.00 38.29 3.73
287 288 5.277683 GCAATTGACGATCTGCTGATAATGT 60.278 40.000 10.34 5.78 32.19 2.71
301 302 0.179100 TAATGTGGCTCGCTCTCTGC 60.179 55.000 0.00 0.00 38.57 4.26
312 313 3.669036 CTCTCTGCCGTGGTCGTCG 62.669 68.421 0.00 0.00 35.01 5.12
343 344 1.493950 GCATGGCGAGAATGGTCGAG 61.494 60.000 0.00 0.00 42.85 4.04
394 395 2.534298 CAAATTGCAACCGTGTCAACA 58.466 42.857 0.00 0.00 0.00 3.33
396 397 0.383949 ATTGCAACCGTGTCAACACC 59.616 50.000 0.00 0.00 43.66 4.16
398 399 2.841160 GCAACCGTGTCAACACCCC 61.841 63.158 7.66 0.00 43.66 4.95
399 400 2.190841 CAACCGTGTCAACACCCCC 61.191 63.158 7.66 0.00 43.66 5.40
446 447 0.521735 AAAATGACGCCTCTTTCGCC 59.478 50.000 0.00 0.00 0.00 5.54
447 448 1.635663 AAATGACGCCTCTTTCGCCG 61.636 55.000 0.00 0.00 0.00 6.46
470 471 6.128742 CCGAAAAGAAAAGAAAATGATGCCTG 60.129 38.462 0.00 0.00 0.00 4.85
487 488 3.019564 GCCTGGAAGACAAGTGCATAAT 58.980 45.455 0.00 0.00 34.07 1.28
493 494 4.034975 GGAAGACAAGTGCATAATCAGCTC 59.965 45.833 0.00 0.00 0.00 4.09
496 497 3.276857 ACAAGTGCATAATCAGCTCCAG 58.723 45.455 0.00 0.00 0.00 3.86
501 502 1.224075 CATAATCAGCTCCAGCCACG 58.776 55.000 0.00 0.00 43.38 4.94
540 541 7.158243 GTGGAGTACGTATTGTATGTTTAGC 57.842 40.000 0.00 0.00 35.02 3.09
541 542 6.199719 GTGGAGTACGTATTGTATGTTTAGCC 59.800 42.308 0.00 0.00 35.02 3.93
542 543 6.097270 TGGAGTACGTATTGTATGTTTAGCCT 59.903 38.462 0.00 0.00 35.02 4.58
543 544 6.982724 GGAGTACGTATTGTATGTTTAGCCTT 59.017 38.462 0.00 0.00 35.02 4.35
544 545 8.137437 GGAGTACGTATTGTATGTTTAGCCTTA 58.863 37.037 0.00 0.00 35.02 2.69
545 546 9.688592 GAGTACGTATTGTATGTTTAGCCTTAT 57.311 33.333 0.00 0.00 35.02 1.73
562 563 5.190726 AGCCTTATTGCTCTATTCTATCCCC 59.809 44.000 0.00 0.00 36.75 4.81
594 625 2.454921 TGTGCAACATGGATCGTCG 58.545 52.632 0.00 0.00 45.67 5.12
614 679 1.710816 GTCCCGGATCTGATCTTCCT 58.289 55.000 16.61 0.00 0.00 3.36
623 688 3.087370 TCTGATCTTCCTGACCTTCGA 57.913 47.619 0.00 0.00 0.00 3.71
732 798 0.178964 CACCATCCACCCACCAAAGT 60.179 55.000 0.00 0.00 0.00 2.66
785 874 0.743097 GCAGGCAGAATCCAATCCAC 59.257 55.000 0.00 0.00 0.00 4.02
793 1207 4.678840 GCAGAATCCAATCCACCATCAAAC 60.679 45.833 0.00 0.00 0.00 2.93
799 1213 5.609423 TCCAATCCACCATCAAACAAAAAG 58.391 37.500 0.00 0.00 0.00 2.27
804 1218 5.105752 TCCACCATCAAACAAAAAGAAACG 58.894 37.500 0.00 0.00 0.00 3.60
805 1219 4.260172 CCACCATCAAACAAAAAGAAACGC 60.260 41.667 0.00 0.00 0.00 4.84
806 1220 4.566360 CACCATCAAACAAAAAGAAACGCT 59.434 37.500 0.00 0.00 0.00 5.07
813 1242 0.958822 AAAAAGAAACGCTGCCCGAT 59.041 45.000 0.61 0.00 41.02 4.18
925 1375 2.436292 CCACTGAGCAGAGCAGCC 60.436 66.667 4.21 0.00 36.86 4.85
965 1415 2.256461 CAGGAACGGCAAAGCAGC 59.744 61.111 0.00 0.00 0.00 5.25
1059 1509 4.740822 GCCCGTGCATGAACCCCT 62.741 66.667 7.72 0.00 37.47 4.79
1061 1511 2.350895 CCGTGCATGAACCCCTGA 59.649 61.111 7.72 0.00 0.00 3.86
1062 1512 1.077501 CCGTGCATGAACCCCTGAT 60.078 57.895 7.72 0.00 0.00 2.90
1066 1516 0.178767 TGCATGAACCCCTGATCTCG 59.821 55.000 0.00 0.00 0.00 4.04
1070 1520 3.447025 GAACCCCTGATCTCGCCCG 62.447 68.421 0.00 0.00 0.00 6.13
1071 1521 3.976490 AACCCCTGATCTCGCCCGA 62.976 63.158 0.00 0.00 0.00 5.14
1072 1522 3.154473 CCCCTGATCTCGCCCGAA 61.154 66.667 0.00 0.00 0.00 4.30
1073 1523 2.731571 CCCCTGATCTCGCCCGAAA 61.732 63.158 0.00 0.00 0.00 3.46
1074 1524 1.227380 CCCTGATCTCGCCCGAAAG 60.227 63.158 0.00 0.00 0.00 2.62
1082 1552 0.110823 CTCGCCCGAAAGTCAAAACG 60.111 55.000 0.00 0.00 0.00 3.60
1155 1629 8.772250 AGGATTTTCTCTCTCACCATGTTATTA 58.228 33.333 0.00 0.00 0.00 0.98
1157 1631 9.823647 GATTTTCTCTCTCACCATGTTATTAGA 57.176 33.333 0.00 0.00 0.00 2.10
1184 1658 5.591643 AGTTGTGCTGTTATTCACTTACG 57.408 39.130 0.00 0.00 34.49 3.18
1185 1659 5.054477 AGTTGTGCTGTTATTCACTTACGT 58.946 37.500 0.00 0.00 34.49 3.57
1186 1660 6.218019 AGTTGTGCTGTTATTCACTTACGTA 58.782 36.000 0.00 0.00 34.49 3.57
1211 1686 2.426305 CTTGTCCAGTCCCAACCCCC 62.426 65.000 0.00 0.00 0.00 5.40
1219 1694 1.545173 TCCCAACCCCCAGCCAATA 60.545 57.895 0.00 0.00 0.00 1.90
1243 1718 2.641815 ACAGCTCCTCAATCCTCAAAGT 59.358 45.455 0.00 0.00 0.00 2.66
1248 1723 4.082517 GCTCCTCAATCCTCAAAGTTTTCC 60.083 45.833 0.00 0.00 0.00 3.13
1250 1725 5.705400 TCCTCAATCCTCAAAGTTTTCCTT 58.295 37.500 0.00 0.00 33.79 3.36
1253 1728 6.925718 CCTCAATCCTCAAAGTTTTCCTTTTC 59.074 38.462 0.00 0.00 41.51 2.29
1254 1729 6.816136 TCAATCCTCAAAGTTTTCCTTTTCC 58.184 36.000 0.00 0.00 41.51 3.13
1282 1757 9.547753 TTTGGAGTTTCAGATAATACTAGATGC 57.452 33.333 0.00 0.00 0.00 3.91
1288 1921 7.411486 TTCAGATAATACTAGATGCCTAGCC 57.589 40.000 0.00 0.00 44.87 3.93
1331 1977 3.695556 TGAACTGAGAGAGAGAGAGCATG 59.304 47.826 0.00 0.00 0.00 4.06
1342 1988 1.485480 AGAGAGCATGGGTGATGACAG 59.515 52.381 0.00 0.00 33.31 3.51
1349 1995 4.460382 AGCATGGGTGATGACAGTAAAAAG 59.540 41.667 0.00 0.00 33.31 2.27
1381 2039 7.355332 AAAATCTATTTTCTGCAATGTGTGC 57.645 32.000 0.00 0.00 43.74 4.57
1416 2074 1.425428 GCCGGCGATCTTTGTTCAG 59.575 57.895 12.58 0.00 0.00 3.02
1417 2075 1.298859 GCCGGCGATCTTTGTTCAGT 61.299 55.000 12.58 0.00 0.00 3.41
1438 2096 1.156736 AAAGAACGTGAGGCCATTCG 58.843 50.000 5.01 8.81 0.00 3.34
1470 2128 5.393678 GGTCGATATCAAGAAGGGCTATCTC 60.394 48.000 3.12 0.00 0.00 2.75
1493 2151 6.979418 TCTATCTATCTGTGGAGCTGGATAT 58.021 40.000 0.00 0.00 0.00 1.63
1495 2153 7.996066 TCTATCTATCTGTGGAGCTGGATATAC 59.004 40.741 0.00 0.00 0.00 1.47
1497 2155 5.948758 TCTATCTGTGGAGCTGGATATACAG 59.051 44.000 10.92 10.92 41.41 2.74
1498 2156 4.184649 TCTGTGGAGCTGGATATACAGA 57.815 45.455 19.72 7.80 41.35 3.41
1499 2157 4.745351 TCTGTGGAGCTGGATATACAGAT 58.255 43.478 19.72 13.09 39.46 2.90
1500 2158 5.421693 ATCTGTGGAGCTGGATATACAGATC 59.578 44.000 22.68 22.68 46.92 2.75
1508 2166 7.976135 AGCTGGATATACAGATCACAAAATC 57.024 36.000 19.72 0.00 40.97 2.17
1585 2249 1.407437 GCAGAACAGTGTAGATGGGGG 60.407 57.143 0.00 0.00 0.00 5.40
1587 2251 2.571653 CAGAACAGTGTAGATGGGGGAA 59.428 50.000 0.00 0.00 0.00 3.97
1650 2319 9.770097 TCATTCCATGAGACTATCAATAGTTTC 57.230 33.333 11.76 11.76 42.53 2.78
1685 2354 9.910511 CAACATTTTCAATGCTTATTATTCAGC 57.089 29.630 0.00 0.00 36.49 4.26
1724 2393 9.542462 GGCACATCTAATCTGTGTTAATTAGTA 57.458 33.333 5.45 0.00 44.62 1.82
1764 2436 8.574196 AATTGTTTCAGTTAGATTTTTCACCG 57.426 30.769 0.00 0.00 0.00 4.94
1770 2442 5.008217 TCAGTTAGATTTTTCACCGTTGTGG 59.992 40.000 0.00 0.00 42.98 4.17
1860 2569 1.443802 GCCTACCAAAGCACAGAGTC 58.556 55.000 0.00 0.00 0.00 3.36
2043 2752 1.999071 CTCTCTTCCCCGACGAGCTG 61.999 65.000 0.00 0.00 29.66 4.24
2047 2756 2.356818 CTTCCCCGACGAGCTGATCC 62.357 65.000 0.00 0.00 0.00 3.36
2145 2854 2.352960 GCCGCTGATCAGGTAAAGAAAG 59.647 50.000 23.89 0.00 0.00 2.62
2146 2855 3.861840 CCGCTGATCAGGTAAAGAAAGA 58.138 45.455 23.89 0.00 0.00 2.52
2147 2856 4.446371 CCGCTGATCAGGTAAAGAAAGAT 58.554 43.478 23.89 0.00 0.00 2.40
2148 2857 4.272018 CCGCTGATCAGGTAAAGAAAGATG 59.728 45.833 23.89 0.00 0.00 2.90
2152 2861 5.809001 TGATCAGGTAAAGAAAGATGCTGT 58.191 37.500 0.00 0.00 0.00 4.40
2153 2862 6.240894 TGATCAGGTAAAGAAAGATGCTGTT 58.759 36.000 0.00 0.00 0.00 3.16
2157 2866 4.217118 AGGTAAAGAAAGATGCTGTTGCTG 59.783 41.667 0.00 0.00 40.48 4.41
2159 2868 3.911661 AAGAAAGATGCTGTTGCTGTC 57.088 42.857 0.00 0.00 40.48 3.51
2161 2870 1.532868 GAAAGATGCTGTTGCTGTCGT 59.467 47.619 0.00 0.00 40.48 4.34
2162 2871 0.870393 AAGATGCTGTTGCTGTCGTG 59.130 50.000 0.00 0.00 40.48 4.35
2163 2872 0.033920 AGATGCTGTTGCTGTCGTGA 59.966 50.000 0.00 0.00 40.48 4.35
2168 2896 1.264020 GCTGTTGCTGTCGTGATTCAA 59.736 47.619 0.00 0.00 36.03 2.69
2184 2912 1.344065 TCAAGGGAGCGTGGAGTAAA 58.656 50.000 0.00 0.00 0.00 2.01
2185 2913 1.001633 TCAAGGGAGCGTGGAGTAAAC 59.998 52.381 0.00 0.00 0.00 2.01
2186 2914 1.053424 AAGGGAGCGTGGAGTAAACA 58.947 50.000 0.00 0.00 0.00 2.83
2187 2915 1.053424 AGGGAGCGTGGAGTAAACAA 58.947 50.000 0.00 0.00 0.00 2.83
2188 2916 1.002087 AGGGAGCGTGGAGTAAACAAG 59.998 52.381 0.00 0.00 0.00 3.16
2189 2917 1.439679 GGAGCGTGGAGTAAACAAGG 58.560 55.000 0.00 0.00 0.00 3.61
2192 2920 1.140252 AGCGTGGAGTAAACAAGGTGT 59.860 47.619 0.00 0.00 0.00 4.16
2936 3669 3.692406 ACCCTCGGCCACGACTTC 61.692 66.667 2.24 0.00 45.59 3.01
2961 3694 0.887836 CGATCCCATCCATGCAGGTG 60.888 60.000 0.00 0.00 39.02 4.00
2964 3697 0.034186 TCCCATCCATGCAGGTGTTC 60.034 55.000 0.00 0.00 39.02 3.18
2978 3711 1.537202 GGTGTTCATCACTGCAACTCC 59.463 52.381 0.00 0.00 45.50 3.85
2979 3712 2.498167 GTGTTCATCACTGCAACTCCT 58.502 47.619 0.00 0.00 43.13 3.69
2980 3713 2.880890 GTGTTCATCACTGCAACTCCTT 59.119 45.455 0.00 0.00 43.13 3.36
2981 3714 4.065088 GTGTTCATCACTGCAACTCCTTA 58.935 43.478 0.00 0.00 43.13 2.69
2982 3715 4.697352 GTGTTCATCACTGCAACTCCTTAT 59.303 41.667 0.00 0.00 43.13 1.73
3020 3758 2.739379 GCTTCCTGCTCTGTTTACTGAC 59.261 50.000 0.00 0.00 38.95 3.51
3070 3809 4.247781 CATGGAATGGCGCCTCTT 57.752 55.556 29.70 20.87 41.79 2.85
3142 3881 1.961394 ACTGAGTGCTTCGAAGGTACA 59.039 47.619 25.77 13.02 0.00 2.90
3143 3882 2.563179 ACTGAGTGCTTCGAAGGTACAT 59.437 45.455 25.77 6.60 0.00 2.29
3144 3883 2.926200 CTGAGTGCTTCGAAGGTACATG 59.074 50.000 25.77 0.41 0.00 3.21
3148 3887 1.621317 TGCTTCGAAGGTACATGTCCA 59.379 47.619 25.77 9.47 0.00 4.02
3151 3890 3.802685 GCTTCGAAGGTACATGTCCATAC 59.197 47.826 25.77 0.00 0.00 2.39
3159 3971 5.260424 AGGTACATGTCCATACATTTTGCA 58.740 37.500 0.00 0.00 44.07 4.08
3162 3974 5.314923 ACATGTCCATACATTTTGCAGTC 57.685 39.130 0.00 0.00 44.07 3.51
3165 3977 4.260985 TGTCCATACATTTTGCAGTCGAT 58.739 39.130 0.00 0.00 0.00 3.59
3179 3991 3.670895 GCAGTCGATTTCTCGTCTCTTGA 60.671 47.826 0.00 0.00 45.25 3.02
3181 3993 3.119779 AGTCGATTTCTCGTCTCTTGACC 60.120 47.826 0.00 0.00 45.25 4.02
3182 3994 2.159558 TCGATTTCTCGTCTCTTGACCG 60.160 50.000 0.00 0.00 45.25 4.79
3183 3995 2.414293 CGATTTCTCGTCTCTTGACCGT 60.414 50.000 0.00 0.00 39.94 4.83
3184 3996 2.417339 TTTCTCGTCTCTTGACCGTG 57.583 50.000 0.00 0.00 39.94 4.94
3185 3997 1.315690 TTCTCGTCTCTTGACCGTGT 58.684 50.000 0.00 0.00 39.94 4.49
3186 3998 2.174363 TCTCGTCTCTTGACCGTGTA 57.826 50.000 0.00 0.00 39.94 2.90
3187 3999 2.708051 TCTCGTCTCTTGACCGTGTAT 58.292 47.619 0.00 0.00 39.94 2.29
3189 4001 3.504906 TCTCGTCTCTTGACCGTGTATTT 59.495 43.478 0.00 0.00 39.94 1.40
3190 4002 3.571571 TCGTCTCTTGACCGTGTATTTG 58.428 45.455 0.00 0.00 39.94 2.32
3191 4003 3.253921 TCGTCTCTTGACCGTGTATTTGA 59.746 43.478 0.00 0.00 39.94 2.69
3192 4004 3.985279 CGTCTCTTGACCGTGTATTTGAA 59.015 43.478 0.00 0.00 39.94 2.69
3193 4005 4.143389 CGTCTCTTGACCGTGTATTTGAAC 60.143 45.833 0.00 0.00 39.94 3.18
3194 4006 4.989168 GTCTCTTGACCGTGTATTTGAACT 59.011 41.667 0.00 0.00 37.24 3.01
3195 4007 5.118817 GTCTCTTGACCGTGTATTTGAACTC 59.881 44.000 0.00 0.00 37.24 3.01
3483 4295 2.758648 GGGTGCCATTCCCAAAGTT 58.241 52.632 0.00 0.00 44.05 2.66
3495 4307 6.350445 CCATTCCCAAAGTTTGATGTTAGAGG 60.350 42.308 17.33 7.01 0.00 3.69
3517 4329 7.398618 AGAGGTTCAGAGATTGATAGAAGAACA 59.601 37.037 0.00 0.00 36.69 3.18
3529 4341 3.933861 AGAAGAACAGTGTGGGAAGTT 57.066 42.857 0.00 0.00 0.00 2.66
3532 4344 1.133792 AGAACAGTGTGGGAAGTTGGG 60.134 52.381 0.00 0.00 0.00 4.12
3615 4427 7.232534 TCAATAACAGATGTTACCTTTTGGCTT 59.767 33.333 7.55 0.00 42.55 4.35
3626 4438 0.478072 TTTTGGCTTCTGCTCCCTCA 59.522 50.000 0.00 0.00 39.59 3.86
3727 4541 8.739972 CAATATAACTCCCCATTTGGCTATTAC 58.260 37.037 0.00 0.00 0.00 1.89
3728 4542 4.601406 AACTCCCCATTTGGCTATTACA 57.399 40.909 0.00 0.00 0.00 2.41
3729 4543 4.814224 ACTCCCCATTTGGCTATTACAT 57.186 40.909 0.00 0.00 0.00 2.29
3730 4544 5.142806 ACTCCCCATTTGGCTATTACATT 57.857 39.130 0.00 0.00 0.00 2.71
3731 4545 4.895297 ACTCCCCATTTGGCTATTACATTG 59.105 41.667 0.00 0.00 0.00 2.82
3732 4546 4.877773 TCCCCATTTGGCTATTACATTGT 58.122 39.130 0.00 0.00 0.00 2.71
3733 4547 4.892934 TCCCCATTTGGCTATTACATTGTC 59.107 41.667 0.00 0.00 0.00 3.18
3734 4548 4.895297 CCCCATTTGGCTATTACATTGTCT 59.105 41.667 0.00 0.00 0.00 3.41
3735 4549 5.221303 CCCCATTTGGCTATTACATTGTCTG 60.221 44.000 0.00 0.00 0.00 3.51
3755 4569 4.287067 TCTGACTGTCATTTCTTAGGGCTT 59.713 41.667 11.45 0.00 0.00 4.35
3759 4573 6.599244 TGACTGTCATTTCTTAGGGCTTATTG 59.401 38.462 6.36 0.00 0.00 1.90
3761 4575 5.200483 TGTCATTTCTTAGGGCTTATTGGG 58.800 41.667 0.00 0.00 0.00 4.12
3762 4576 5.201243 GTCATTTCTTAGGGCTTATTGGGT 58.799 41.667 0.00 0.00 0.00 4.51
3763 4577 6.069323 TGTCATTTCTTAGGGCTTATTGGGTA 60.069 38.462 0.00 0.00 0.00 3.69
3764 4578 6.262496 GTCATTTCTTAGGGCTTATTGGGTAC 59.738 42.308 0.00 0.00 0.00 3.34
3767 4581 5.106876 TCTTAGGGCTTATTGGGTACAAC 57.893 43.478 0.00 0.00 39.87 3.32
3768 4582 4.536888 TCTTAGGGCTTATTGGGTACAACA 59.463 41.667 0.00 0.00 39.87 3.33
3769 4583 3.366052 AGGGCTTATTGGGTACAACAG 57.634 47.619 0.00 0.00 39.87 3.16
3770 4584 2.647802 AGGGCTTATTGGGTACAACAGT 59.352 45.455 0.00 0.00 39.87 3.55
3886 4702 7.601508 TCCTCTAAATTTTGTAGGAGTCGAAAC 59.398 37.037 12.92 0.00 32.60 2.78
3887 4703 7.148457 CCTCTAAATTTTGTAGGAGTCGAAACC 60.148 40.741 0.00 0.00 0.00 3.27
3889 4705 8.587608 TCTAAATTTTGTAGGAGTCGAAACCTA 58.412 33.333 12.86 12.86 37.68 3.08
3898 4714 5.480205 AGGAGTCGAAACCTAAGATCAAAC 58.520 41.667 9.50 0.00 34.47 2.93
3935 4754 3.326006 ACTTTGAGATGTCTGAGGCAAGA 59.674 43.478 0.00 0.00 0.00 3.02
3940 4759 6.244552 TGAGATGTCTGAGGCAAGATATTT 57.755 37.500 0.00 0.00 29.13 1.40
3941 4760 7.365497 TGAGATGTCTGAGGCAAGATATTTA 57.635 36.000 0.00 0.00 29.13 1.40
3982 4801 7.754625 ACAACTACACGACAACTTTGTAAAAT 58.245 30.769 0.00 0.00 42.43 1.82
3986 4805 4.037089 ACACGACAACTTTGTAAAATCCCC 59.963 41.667 0.00 0.00 42.43 4.81
3988 4807 3.251487 CGACAACTTTGTAAAATCCCCGT 59.749 43.478 0.00 0.00 42.43 5.28
4002 4821 6.911250 AAATCCCCGTGTTTCTTTAGAAAT 57.089 33.333 8.07 0.00 44.69 2.17
4040 4859 9.862371 AATACAAATACAAACACTCACAAACAA 57.138 25.926 0.00 0.00 0.00 2.83
4044 4863 8.794406 CAAATACAAACACTCACAAACAAGTAC 58.206 33.333 0.00 0.00 0.00 2.73
4048 4867 8.220755 ACAAACACTCACAAACAAGTACATAT 57.779 30.769 0.00 0.00 0.00 1.78
4052 4871 8.758633 ACACTCACAAACAAGTACATATACTC 57.241 34.615 0.00 0.00 41.00 2.59
4053 4872 8.364894 ACACTCACAAACAAGTACATATACTCA 58.635 33.333 0.00 0.00 41.00 3.41
4056 4875 7.101054 TCACAAACAAGTACATATACTCACCC 58.899 38.462 0.00 0.00 41.00 4.61
4057 4876 7.038587 TCACAAACAAGTACATATACTCACCCT 60.039 37.037 0.00 0.00 41.00 4.34
4058 4877 8.255206 CACAAACAAGTACATATACTCACCCTA 58.745 37.037 0.00 0.00 41.00 3.53
4059 4878 8.989131 ACAAACAAGTACATATACTCACCCTAT 58.011 33.333 0.00 0.00 41.00 2.57
4064 4883 9.622004 CAAGTACATATACTCACCCTATAAACG 57.378 37.037 0.00 0.00 41.00 3.60
4065 4884 7.824672 AGTACATATACTCACCCTATAAACGC 58.175 38.462 0.00 0.00 36.97 4.84
4066 4885 6.659745 ACATATACTCACCCTATAAACGCA 57.340 37.500 0.00 0.00 0.00 5.24
4067 4886 6.453092 ACATATACTCACCCTATAAACGCAC 58.547 40.000 0.00 0.00 0.00 5.34
4068 4887 6.041182 ACATATACTCACCCTATAAACGCACA 59.959 38.462 0.00 0.00 0.00 4.57
4069 4888 2.968675 ACTCACCCTATAAACGCACAC 58.031 47.619 0.00 0.00 0.00 3.82
4071 4890 0.372334 CACCCTATAAACGCACACGC 59.628 55.000 0.00 0.00 45.53 5.34
4072 4891 0.037139 ACCCTATAAACGCACACGCA 60.037 50.000 0.00 0.00 45.53 5.24
4073 4892 0.372334 CCCTATAAACGCACACGCAC 59.628 55.000 0.00 0.00 45.53 5.34
4074 4893 1.072391 CCTATAAACGCACACGCACA 58.928 50.000 0.00 0.00 45.53 4.57
4075 4894 1.201877 CCTATAAACGCACACGCACAC 60.202 52.381 0.00 0.00 45.53 3.82
4076 4895 1.457683 CTATAAACGCACACGCACACA 59.542 47.619 0.00 0.00 45.53 3.72
4077 4896 0.041663 ATAAACGCACACGCACACAC 60.042 50.000 0.00 0.00 45.53 3.82
4078 4897 1.359459 TAAACGCACACGCACACACA 61.359 50.000 0.00 0.00 45.53 3.72
4079 4898 2.842588 AAACGCACACGCACACACAC 62.843 55.000 0.00 0.00 45.53 3.82
4081 4900 4.589700 GCACACGCACACACACCG 62.590 66.667 0.00 0.00 38.36 4.94
4082 4901 3.192230 CACACGCACACACACCGT 61.192 61.111 0.00 0.00 35.29 4.83
4083 4902 1.878975 CACACGCACACACACCGTA 60.879 57.895 0.00 0.00 33.39 4.02
4084 4903 1.068417 ACACGCACACACACCGTAT 59.932 52.632 0.00 0.00 33.39 3.06
4085 4904 0.942410 ACACGCACACACACCGTATC 60.942 55.000 0.00 0.00 33.39 2.24
4087 4906 2.098233 CGCACACACACCGTATCCC 61.098 63.158 0.00 0.00 0.00 3.85
4088 4907 2.098233 GCACACACACCGTATCCCG 61.098 63.158 0.00 0.00 0.00 5.14
4098 4917 1.226974 CGTATCCCGGTGAGCACTG 60.227 63.158 0.00 2.45 37.44 3.66
4099 4918 1.663379 CGTATCCCGGTGAGCACTGA 61.663 60.000 10.89 1.50 40.06 3.41
4101 4920 0.324368 TATCCCGGTGAGCACTGAGT 60.324 55.000 10.89 0.00 40.06 3.41
4102 4921 1.608717 ATCCCGGTGAGCACTGAGTC 61.609 60.000 10.89 0.00 40.06 3.36
4103 4922 2.126307 CCGGTGAGCACTGAGTCG 60.126 66.667 10.89 0.68 40.06 4.18
4104 4923 2.626780 CCGGTGAGCACTGAGTCGA 61.627 63.158 10.89 0.00 40.06 4.20
4105 4924 1.508545 CGGTGAGCACTGAGTCGAT 59.491 57.895 3.35 0.00 40.06 3.59
4106 4925 0.799917 CGGTGAGCACTGAGTCGATG 60.800 60.000 3.35 0.00 40.06 3.84
4107 4926 0.459237 GGTGAGCACTGAGTCGATGG 60.459 60.000 0.16 0.00 0.00 3.51
4109 4928 0.900182 TGAGCACTGAGTCGATGGGT 60.900 55.000 0.00 0.00 0.00 4.51
4110 4929 0.247736 GAGCACTGAGTCGATGGGTT 59.752 55.000 0.00 0.00 0.00 4.11
4111 4930 0.687354 AGCACTGAGTCGATGGGTTT 59.313 50.000 0.00 0.00 0.00 3.27
4112 4931 1.072331 AGCACTGAGTCGATGGGTTTT 59.928 47.619 0.00 0.00 0.00 2.43
4115 4934 1.420138 ACTGAGTCGATGGGTTTTGGT 59.580 47.619 0.00 0.00 0.00 3.67
4118 4947 3.869065 TGAGTCGATGGGTTTTGGTATC 58.131 45.455 0.00 0.00 0.00 2.24
4121 4950 3.830744 TCGATGGGTTTTGGTATCGAT 57.169 42.857 2.16 2.16 44.29 3.59
4127 4956 4.258543 TGGGTTTTGGTATCGATGAAGTC 58.741 43.478 8.54 0.00 0.00 3.01
4130 4959 4.094442 GGTTTTGGTATCGATGAAGTCACC 59.906 45.833 8.54 7.01 0.00 4.02
4135 4964 4.250464 GGTATCGATGAAGTCACCACAAA 58.750 43.478 8.54 0.00 0.00 2.83
4138 4967 2.483877 TCGATGAAGTCACCACAAATGC 59.516 45.455 0.00 0.00 0.00 3.56
4141 4970 2.229792 TGAAGTCACCACAAATGCCTC 58.770 47.619 0.00 0.00 0.00 4.70
4142 4971 2.229792 GAAGTCACCACAAATGCCTCA 58.770 47.619 0.00 0.00 0.00 3.86
4146 4975 2.484264 GTCACCACAAATGCCTCACTAC 59.516 50.000 0.00 0.00 0.00 2.73
4148 4977 1.423541 ACCACAAATGCCTCACTACCA 59.576 47.619 0.00 0.00 0.00 3.25
4157 4986 0.682852 CCTCACTACCAACGGGAACA 59.317 55.000 0.00 0.00 38.05 3.18
4159 4988 2.290071 CCTCACTACCAACGGGAACATT 60.290 50.000 0.00 0.00 38.05 2.71
4161 4990 1.199097 CACTACCAACGGGAACATTGC 59.801 52.381 0.00 0.00 38.05 3.56
4164 4993 0.469144 ACCAACGGGAACATTGCCTT 60.469 50.000 0.39 0.00 36.39 4.35
4169 4999 3.080300 ACGGGAACATTGCCTTCATTA 57.920 42.857 0.39 0.00 36.39 1.90
4170 5000 3.426615 ACGGGAACATTGCCTTCATTAA 58.573 40.909 0.39 0.00 36.39 1.40
4173 5003 4.864247 CGGGAACATTGCCTTCATTAAAAG 59.136 41.667 0.39 0.00 36.39 2.27
4199 5029 7.961326 ATATTTTGCTTTTAGGAGACACCAT 57.039 32.000 0.00 0.00 42.04 3.55
4215 5045 2.688446 CACCATAGCGTCTAACCTGAGA 59.312 50.000 0.00 0.00 0.00 3.27
4221 5051 4.314740 AGCGTCTAACCTGAGATTGATC 57.685 45.455 0.00 0.00 0.00 2.92
4229 5059 1.476471 CCTGAGATTGATCCCTGGTGC 60.476 57.143 0.00 0.00 0.00 5.01
4230 5060 1.489649 CTGAGATTGATCCCTGGTGCT 59.510 52.381 0.00 0.00 0.00 4.40
4231 5061 1.211212 TGAGATTGATCCCTGGTGCTG 59.789 52.381 0.00 0.00 0.00 4.41
4232 5062 0.549950 AGATTGATCCCTGGTGCTGG 59.450 55.000 0.00 0.00 0.00 4.85
4233 5063 0.466922 GATTGATCCCTGGTGCTGGG 60.467 60.000 0.00 0.00 42.93 4.45
4234 5064 1.217057 ATTGATCCCTGGTGCTGGGT 61.217 55.000 0.00 0.00 42.31 4.51
4235 5065 0.548926 TTGATCCCTGGTGCTGGGTA 60.549 55.000 0.00 0.00 42.31 3.69
4236 5066 1.271840 TGATCCCTGGTGCTGGGTAC 61.272 60.000 0.00 0.00 42.31 3.34
4252 5082 2.392662 GGTACCACTACCCTCTTACCC 58.607 57.143 7.15 0.00 37.08 3.69
4253 5083 2.292455 GGTACCACTACCCTCTTACCCA 60.292 54.545 7.15 0.00 37.08 4.51
4254 5084 2.963654 ACCACTACCCTCTTACCCAT 57.036 50.000 0.00 0.00 0.00 4.00
4255 5085 2.760581 ACCACTACCCTCTTACCCATC 58.239 52.381 0.00 0.00 0.00 3.51
4256 5086 2.047830 CCACTACCCTCTTACCCATCC 58.952 57.143 0.00 0.00 0.00 3.51
4257 5087 2.360423 CCACTACCCTCTTACCCATCCT 60.360 54.545 0.00 0.00 0.00 3.24
4258 5088 3.116862 CCACTACCCTCTTACCCATCCTA 60.117 52.174 0.00 0.00 0.00 2.94
4259 5089 4.450861 CCACTACCCTCTTACCCATCCTAT 60.451 50.000 0.00 0.00 0.00 2.57
4260 5090 5.222484 CCACTACCCTCTTACCCATCCTATA 60.222 48.000 0.00 0.00 0.00 1.31
4261 5091 5.952947 CACTACCCTCTTACCCATCCTATAG 59.047 48.000 0.00 0.00 0.00 1.31
4262 5092 3.792515 ACCCTCTTACCCATCCTATAGC 58.207 50.000 0.00 0.00 0.00 2.97
4263 5093 3.406498 ACCCTCTTACCCATCCTATAGCT 59.594 47.826 0.00 0.00 0.00 3.32
4264 5094 4.611150 ACCCTCTTACCCATCCTATAGCTA 59.389 45.833 0.00 0.00 0.00 3.32
4265 5095 5.259012 ACCCTCTTACCCATCCTATAGCTAT 59.741 44.000 11.77 11.77 0.00 2.97
4266 5096 5.836358 CCCTCTTACCCATCCTATAGCTATC 59.164 48.000 10.16 0.00 0.00 2.08
4267 5097 6.436027 CCTCTTACCCATCCTATAGCTATCA 58.564 44.000 10.16 0.00 0.00 2.15
4268 5098 6.897966 CCTCTTACCCATCCTATAGCTATCAA 59.102 42.308 10.16 0.00 0.00 2.57
4269 5099 7.566879 CCTCTTACCCATCCTATAGCTATCAAT 59.433 40.741 10.16 0.00 0.00 2.57
4270 5100 9.647918 CTCTTACCCATCCTATAGCTATCAATA 57.352 37.037 10.16 0.00 0.00 1.90
4273 5103 7.130681 ACCCATCCTATAGCTATCAATAAGC 57.869 40.000 10.16 0.00 40.40 3.09
4283 5113 5.665381 GCTATCAATAAGCTGGTCACTTC 57.335 43.478 0.00 0.00 37.01 3.01
4284 5114 4.513318 GCTATCAATAAGCTGGTCACTTCC 59.487 45.833 0.00 0.00 37.01 3.46
4285 5115 4.851639 ATCAATAAGCTGGTCACTTCCT 57.148 40.909 0.00 0.00 0.00 3.36
4286 5116 4.207891 TCAATAAGCTGGTCACTTCCTC 57.792 45.455 0.00 0.00 0.00 3.71
4287 5117 3.840666 TCAATAAGCTGGTCACTTCCTCT 59.159 43.478 0.00 0.00 0.00 3.69
4288 5118 5.023452 TCAATAAGCTGGTCACTTCCTCTA 58.977 41.667 0.00 0.00 0.00 2.43
4289 5119 5.127845 TCAATAAGCTGGTCACTTCCTCTAG 59.872 44.000 0.00 0.00 0.00 2.43
4290 5120 1.190643 AGCTGGTCACTTCCTCTAGC 58.809 55.000 0.00 0.00 0.00 3.42
4291 5121 1.190643 GCTGGTCACTTCCTCTAGCT 58.809 55.000 0.00 0.00 0.00 3.32
4292 5122 1.552792 GCTGGTCACTTCCTCTAGCTT 59.447 52.381 0.00 0.00 0.00 3.74
4293 5123 2.027653 GCTGGTCACTTCCTCTAGCTTT 60.028 50.000 0.00 0.00 0.00 3.51
4294 5124 3.855858 CTGGTCACTTCCTCTAGCTTTC 58.144 50.000 0.00 0.00 0.00 2.62
4295 5125 3.511477 TGGTCACTTCCTCTAGCTTTCT 58.489 45.455 0.00 0.00 0.00 2.52
4296 5126 4.673968 TGGTCACTTCCTCTAGCTTTCTA 58.326 43.478 0.00 0.00 0.00 2.10
4297 5127 5.273208 TGGTCACTTCCTCTAGCTTTCTAT 58.727 41.667 0.00 0.00 0.00 1.98
4298 5128 5.721960 TGGTCACTTCCTCTAGCTTTCTATT 59.278 40.000 0.00 0.00 0.00 1.73
4299 5129 6.127310 TGGTCACTTCCTCTAGCTTTCTATTC 60.127 42.308 0.00 0.00 0.00 1.75
4300 5130 6.277605 GTCACTTCCTCTAGCTTTCTATTCC 58.722 44.000 0.00 0.00 0.00 3.01
4301 5131 6.097696 GTCACTTCCTCTAGCTTTCTATTCCT 59.902 42.308 0.00 0.00 0.00 3.36
4302 5132 6.670027 TCACTTCCTCTAGCTTTCTATTCCTT 59.330 38.462 0.00 0.00 0.00 3.36
4303 5133 7.181125 TCACTTCCTCTAGCTTTCTATTCCTTT 59.819 37.037 0.00 0.00 0.00 3.11
4304 5134 7.279758 CACTTCCTCTAGCTTTCTATTCCTTTG 59.720 40.741 0.00 0.00 0.00 2.77
4305 5135 6.875972 TCCTCTAGCTTTCTATTCCTTTGT 57.124 37.500 0.00 0.00 0.00 2.83
4306 5136 7.259088 TCCTCTAGCTTTCTATTCCTTTGTT 57.741 36.000 0.00 0.00 0.00 2.83
4307 5137 7.331791 TCCTCTAGCTTTCTATTCCTTTGTTC 58.668 38.462 0.00 0.00 0.00 3.18
4308 5138 6.256757 CCTCTAGCTTTCTATTCCTTTGTTCG 59.743 42.308 0.00 0.00 0.00 3.95
4309 5139 6.698380 TCTAGCTTTCTATTCCTTTGTTCGT 58.302 36.000 0.00 0.00 0.00 3.85
4310 5140 5.613358 AGCTTTCTATTCCTTTGTTCGTG 57.387 39.130 0.00 0.00 0.00 4.35
4311 5141 4.455877 AGCTTTCTATTCCTTTGTTCGTGG 59.544 41.667 0.00 0.00 0.00 4.94
4312 5142 4.379499 GCTTTCTATTCCTTTGTTCGTGGG 60.379 45.833 0.00 0.00 0.00 4.61
4313 5143 4.627284 TTCTATTCCTTTGTTCGTGGGA 57.373 40.909 0.00 0.00 0.00 4.37
4314 5144 4.837093 TCTATTCCTTTGTTCGTGGGAT 57.163 40.909 0.00 0.00 0.00 3.85
4315 5145 4.513442 TCTATTCCTTTGTTCGTGGGATG 58.487 43.478 0.00 0.00 0.00 3.51
4316 5146 1.904287 TTCCTTTGTTCGTGGGATGG 58.096 50.000 0.00 0.00 0.00 3.51
4317 5147 0.768622 TCCTTTGTTCGTGGGATGGT 59.231 50.000 0.00 0.00 0.00 3.55
4318 5148 1.979308 TCCTTTGTTCGTGGGATGGTA 59.021 47.619 0.00 0.00 0.00 3.25
4319 5149 2.372504 TCCTTTGTTCGTGGGATGGTAA 59.627 45.455 0.00 0.00 0.00 2.85
4320 5150 3.009695 TCCTTTGTTCGTGGGATGGTAAT 59.990 43.478 0.00 0.00 0.00 1.89
4321 5151 4.225492 TCCTTTGTTCGTGGGATGGTAATA 59.775 41.667 0.00 0.00 0.00 0.98
4322 5152 5.104277 TCCTTTGTTCGTGGGATGGTAATAT 60.104 40.000 0.00 0.00 0.00 1.28
4323 5153 5.238650 CCTTTGTTCGTGGGATGGTAATATC 59.761 44.000 0.00 0.00 0.00 1.63
4324 5154 3.985008 TGTTCGTGGGATGGTAATATCG 58.015 45.455 0.00 0.00 0.00 2.92
4325 5155 3.385433 TGTTCGTGGGATGGTAATATCGT 59.615 43.478 0.00 0.00 0.00 3.73
4326 5156 4.583907 TGTTCGTGGGATGGTAATATCGTA 59.416 41.667 0.00 0.00 0.00 3.43
4327 5157 5.159209 GTTCGTGGGATGGTAATATCGTAG 58.841 45.833 0.00 0.00 0.00 3.51
4328 5158 4.401022 TCGTGGGATGGTAATATCGTAGT 58.599 43.478 0.00 0.00 0.00 2.73
4329 5159 5.559770 TCGTGGGATGGTAATATCGTAGTA 58.440 41.667 0.00 0.00 0.00 1.82
4330 5160 6.003326 TCGTGGGATGGTAATATCGTAGTAA 58.997 40.000 0.00 0.00 0.00 2.24
4331 5161 6.660521 TCGTGGGATGGTAATATCGTAGTAAT 59.339 38.462 0.00 0.00 0.00 1.89
4332 5162 7.828717 TCGTGGGATGGTAATATCGTAGTAATA 59.171 37.037 0.00 0.00 0.00 0.98
4333 5163 8.127327 CGTGGGATGGTAATATCGTAGTAATAG 58.873 40.741 0.00 0.00 0.00 1.73
4334 5164 8.411683 GTGGGATGGTAATATCGTAGTAATAGG 58.588 40.741 0.00 0.00 0.00 2.57
4335 5165 8.338493 TGGGATGGTAATATCGTAGTAATAGGA 58.662 37.037 0.00 0.00 0.00 2.94
4336 5166 9.193806 GGGATGGTAATATCGTAGTAATAGGAA 57.806 37.037 0.00 0.00 0.00 3.36
4402 5232 9.288576 AGAGAAAAAGATATCATTTGACACACA 57.711 29.630 6.69 0.00 0.00 3.72
4430 5260 8.819643 ATAGAATTTTATCGTTGAGTCTAGGC 57.180 34.615 0.00 0.00 0.00 3.93
4431 5261 6.879400 AGAATTTTATCGTTGAGTCTAGGCT 58.121 36.000 0.00 0.00 0.00 4.58
4432 5262 8.008513 AGAATTTTATCGTTGAGTCTAGGCTA 57.991 34.615 0.00 0.00 0.00 3.93
4433 5263 8.475639 AGAATTTTATCGTTGAGTCTAGGCTAA 58.524 33.333 0.00 0.00 0.00 3.09
4434 5264 9.262358 GAATTTTATCGTTGAGTCTAGGCTAAT 57.738 33.333 0.00 0.00 0.00 1.73
4481 5311 6.301169 GGATTGGTTCCTATCCTACATAGG 57.699 45.833 19.71 0.00 42.06 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.499737 GATGGAACGTGCGGCCAG 61.500 66.667 2.24 0.00 34.74 4.85
18 19 3.950794 GAGATGGAACGTGCGGCCA 62.951 63.158 2.24 9.99 35.91 5.36
19 20 3.195698 GAGATGGAACGTGCGGCC 61.196 66.667 0.00 0.00 0.00 6.13
20 21 3.554692 CGAGATGGAACGTGCGGC 61.555 66.667 0.00 0.00 0.00 6.53
21 22 2.126071 ACGAGATGGAACGTGCGG 60.126 61.111 0.00 0.00 41.17 5.69
22 23 1.006825 TTGACGAGATGGAACGTGCG 61.007 55.000 0.00 0.00 42.74 5.34
23 24 0.716108 CTTGACGAGATGGAACGTGC 59.284 55.000 0.00 0.00 42.74 5.34
24 25 2.065993 ACTTGACGAGATGGAACGTG 57.934 50.000 0.00 0.00 42.74 4.49
25 26 2.223971 ACAACTTGACGAGATGGAACGT 60.224 45.455 5.08 0.00 45.32 3.99
26 27 2.404215 ACAACTTGACGAGATGGAACG 58.596 47.619 5.08 0.00 32.79 3.95
27 28 4.150098 GTGTACAACTTGACGAGATGGAAC 59.850 45.833 0.00 3.64 32.79 3.62
28 29 4.038763 AGTGTACAACTTGACGAGATGGAA 59.961 41.667 0.00 0.00 34.57 3.53
29 30 3.572682 AGTGTACAACTTGACGAGATGGA 59.427 43.478 0.00 0.00 34.57 3.41
30 31 3.675225 CAGTGTACAACTTGACGAGATGG 59.325 47.826 0.00 0.00 36.83 3.51
31 32 4.299155 ACAGTGTACAACTTGACGAGATG 58.701 43.478 0.00 0.00 36.83 2.90
32 33 4.585955 ACAGTGTACAACTTGACGAGAT 57.414 40.909 0.00 0.00 36.83 2.75
33 34 4.109766 CAACAGTGTACAACTTGACGAGA 58.890 43.478 0.00 0.00 36.83 4.04
34 35 3.302480 GCAACAGTGTACAACTTGACGAG 60.302 47.826 0.00 0.00 36.83 4.18
35 36 2.605818 GCAACAGTGTACAACTTGACGA 59.394 45.455 0.00 0.00 36.83 4.20
36 37 2.350192 TGCAACAGTGTACAACTTGACG 59.650 45.455 0.00 0.00 36.83 4.35
37 38 3.486875 GGTGCAACAGTGTACAACTTGAC 60.487 47.826 0.00 1.05 41.75 3.18
38 39 2.680841 GGTGCAACAGTGTACAACTTGA 59.319 45.455 0.00 0.00 41.75 3.02
39 40 2.538737 CGGTGCAACAGTGTACAACTTG 60.539 50.000 0.98 0.54 41.75 3.16
40 41 1.668751 CGGTGCAACAGTGTACAACTT 59.331 47.619 0.98 0.00 41.75 2.66
41 42 1.295792 CGGTGCAACAGTGTACAACT 58.704 50.000 0.98 0.00 41.75 3.16
42 43 1.011333 ACGGTGCAACAGTGTACAAC 58.989 50.000 0.98 0.00 45.58 3.32
43 44 3.462427 ACGGTGCAACAGTGTACAA 57.538 47.368 0.98 0.00 45.58 2.41
56 57 1.736645 CGGTGGTTAGCAGACGGTG 60.737 63.158 1.37 0.00 0.00 4.94
57 58 2.654877 CGGTGGTTAGCAGACGGT 59.345 61.111 1.37 0.00 0.00 4.83
58 59 2.125673 CCGGTGGTTAGCAGACGG 60.126 66.667 11.84 11.84 35.01 4.79
59 60 1.445582 GTCCGGTGGTTAGCAGACG 60.446 63.158 0.00 2.20 0.00 4.18
60 61 1.079336 GGTCCGGTGGTTAGCAGAC 60.079 63.158 0.00 0.00 32.34 3.51
61 62 0.907704 ATGGTCCGGTGGTTAGCAGA 60.908 55.000 0.00 0.00 0.00 4.26
62 63 0.462047 GATGGTCCGGTGGTTAGCAG 60.462 60.000 0.00 0.00 0.00 4.24
63 64 1.195442 TGATGGTCCGGTGGTTAGCA 61.195 55.000 0.00 0.00 0.00 3.49
64 65 0.462047 CTGATGGTCCGGTGGTTAGC 60.462 60.000 0.00 0.00 0.00 3.09
65 66 0.462047 GCTGATGGTCCGGTGGTTAG 60.462 60.000 0.00 0.00 0.00 2.34
66 67 0.907704 AGCTGATGGTCCGGTGGTTA 60.908 55.000 0.00 0.00 0.00 2.85
67 68 1.779061 AAGCTGATGGTCCGGTGGTT 61.779 55.000 0.00 0.00 0.00 3.67
68 69 2.185310 GAAGCTGATGGTCCGGTGGT 62.185 60.000 0.00 0.00 0.00 4.16
69 70 1.450312 GAAGCTGATGGTCCGGTGG 60.450 63.158 0.00 0.00 0.00 4.61
70 71 1.811266 CGAAGCTGATGGTCCGGTG 60.811 63.158 0.00 0.00 0.00 4.94
71 72 1.982395 TCGAAGCTGATGGTCCGGT 60.982 57.895 0.00 0.00 0.00 5.28
72 73 1.519455 GTCGAAGCTGATGGTCCGG 60.519 63.158 0.00 0.00 0.00 5.14
73 74 0.803768 CTGTCGAAGCTGATGGTCCG 60.804 60.000 0.00 0.00 0.00 4.79
74 75 0.460987 CCTGTCGAAGCTGATGGTCC 60.461 60.000 0.00 0.00 0.00 4.46
75 76 0.460987 CCCTGTCGAAGCTGATGGTC 60.461 60.000 0.00 0.00 0.00 4.02
76 77 0.904865 TCCCTGTCGAAGCTGATGGT 60.905 55.000 0.00 0.00 0.00 3.55
77 78 0.460987 GTCCCTGTCGAAGCTGATGG 60.461 60.000 0.00 0.00 0.00 3.51
78 79 0.247460 TGTCCCTGTCGAAGCTGATG 59.753 55.000 0.00 0.00 0.00 3.07
79 80 0.247736 GTGTCCCTGTCGAAGCTGAT 59.752 55.000 0.00 0.00 0.00 2.90
80 81 1.666011 GTGTCCCTGTCGAAGCTGA 59.334 57.895 0.00 0.00 0.00 4.26
81 82 1.734477 CGTGTCCCTGTCGAAGCTG 60.734 63.158 0.00 0.00 0.00 4.24
82 83 2.651361 CGTGTCCCTGTCGAAGCT 59.349 61.111 0.00 0.00 0.00 3.74
83 84 3.112709 GCGTGTCCCTGTCGAAGC 61.113 66.667 0.00 0.00 0.00 3.86
84 85 2.022129 GTGCGTGTCCCTGTCGAAG 61.022 63.158 0.00 0.00 0.00 3.79
218 219 1.507630 GCCAATCGTCAATGCAGCA 59.492 52.632 0.00 0.00 0.00 4.41
231 232 1.250154 CGGTTCACCATGTGGCCAAT 61.250 55.000 7.24 0.00 39.32 3.16
236 237 0.323360 ATTCCCGGTTCACCATGTGG 60.323 55.000 0.00 0.00 42.17 4.17
245 246 0.526211 GCTGGTTTGATTCCCGGTTC 59.474 55.000 0.00 0.00 0.00 3.62
249 250 2.230992 TCAATTGCTGGTTTGATTCCCG 59.769 45.455 0.00 0.00 0.00 5.14
259 260 1.089920 GCAGATCGTCAATTGCTGGT 58.910 50.000 0.00 0.00 33.88 4.00
263 264 4.801147 TTATCAGCAGATCGTCAATTGC 57.199 40.909 0.00 0.00 35.67 3.56
267 268 4.122046 CCACATTATCAGCAGATCGTCAA 58.878 43.478 0.00 0.00 35.67 3.18
274 275 1.807755 GCGAGCCACATTATCAGCAGA 60.808 52.381 0.00 0.00 0.00 4.26
301 302 2.880879 CATCAGCGACGACCACGG 60.881 66.667 0.00 0.00 44.46 4.94
410 411 6.038356 GTCATTTTTCTTGGATGCTATGGTG 58.962 40.000 0.00 0.00 0.00 4.17
421 422 3.923017 AAGAGGCGTCATTTTTCTTGG 57.077 42.857 9.41 0.00 0.00 3.61
422 423 3.908382 CGAAAGAGGCGTCATTTTTCTTG 59.092 43.478 9.41 0.00 0.00 3.02
446 447 6.128742 CCAGGCATCATTTTCTTTTCTTTTCG 60.129 38.462 0.00 0.00 0.00 3.46
447 448 6.930722 TCCAGGCATCATTTTCTTTTCTTTTC 59.069 34.615 0.00 0.00 0.00 2.29
470 471 3.944015 AGCTGATTATGCACTTGTCTTCC 59.056 43.478 0.00 0.00 0.00 3.46
501 502 1.375523 CCACGGTGAACACTAGCCC 60.376 63.158 10.28 0.00 0.00 5.19
529 530 9.273016 GAATAGAGCAATAAGGCTAAACATACA 57.727 33.333 0.00 0.00 45.99 2.29
530 531 9.495572 AGAATAGAGCAATAAGGCTAAACATAC 57.504 33.333 0.00 0.00 45.99 2.39
533 534 9.712305 GATAGAATAGAGCAATAAGGCTAAACA 57.288 33.333 0.00 0.00 45.99 2.83
534 535 9.157104 GGATAGAATAGAGCAATAAGGCTAAAC 57.843 37.037 0.00 0.00 45.99 2.01
535 536 8.322091 GGGATAGAATAGAGCAATAAGGCTAAA 58.678 37.037 0.00 0.00 45.99 1.85
536 537 7.092846 GGGGATAGAATAGAGCAATAAGGCTAA 60.093 40.741 0.00 0.00 45.99 3.09
537 538 6.384305 GGGGATAGAATAGAGCAATAAGGCTA 59.616 42.308 0.00 0.00 45.99 3.93
539 540 5.045578 TGGGGATAGAATAGAGCAATAAGGC 60.046 44.000 0.00 0.00 0.00 4.35
540 541 6.013379 TGTGGGGATAGAATAGAGCAATAAGG 60.013 42.308 0.00 0.00 0.00 2.69
541 542 7.009179 TGTGGGGATAGAATAGAGCAATAAG 57.991 40.000 0.00 0.00 0.00 1.73
542 543 7.397221 CATGTGGGGATAGAATAGAGCAATAA 58.603 38.462 0.00 0.00 0.00 1.40
543 544 6.070021 CCATGTGGGGATAGAATAGAGCAATA 60.070 42.308 0.00 0.00 0.00 1.90
544 545 5.280882 CCATGTGGGGATAGAATAGAGCAAT 60.281 44.000 0.00 0.00 0.00 3.56
545 546 4.042062 CCATGTGGGGATAGAATAGAGCAA 59.958 45.833 0.00 0.00 0.00 3.91
546 547 3.584406 CCATGTGGGGATAGAATAGAGCA 59.416 47.826 0.00 0.00 0.00 4.26
547 548 4.213564 CCATGTGGGGATAGAATAGAGC 57.786 50.000 0.00 0.00 0.00 4.09
562 563 2.801679 GTTGCACAAAATCACCCATGTG 59.198 45.455 0.00 0.00 44.55 3.21
577 578 1.019278 ACCGACGATCCATGTTGCAC 61.019 55.000 0.00 0.00 0.00 4.57
579 580 1.429148 GGACCGACGATCCATGTTGC 61.429 60.000 2.40 0.00 36.15 4.17
580 581 0.810031 GGGACCGACGATCCATGTTG 60.810 60.000 11.22 0.00 38.06 3.33
581 582 1.520666 GGGACCGACGATCCATGTT 59.479 57.895 11.22 0.00 38.06 2.71
592 623 0.106167 AAGATCAGATCCGGGACCGA 60.106 55.000 13.13 0.00 42.83 4.69
594 625 0.682292 GGAAGATCAGATCCGGGACC 59.318 60.000 6.80 0.00 0.00 4.46
614 679 3.120792 GCGCACTTATTATCGAAGGTCA 58.879 45.455 0.30 0.00 0.00 4.02
684 749 1.433053 CCGCCGGCGTCATGAATTTA 61.433 55.000 43.12 0.00 37.81 1.40
704 770 1.152963 GTGGATGGTGGCGGCTATT 60.153 57.895 11.43 0.00 0.00 1.73
732 798 2.352030 CGCACGGTGTCCTTTACTTCTA 60.352 50.000 10.24 0.00 0.00 2.10
785 874 4.550639 GCAGCGTTTCTTTTTGTTTGATGG 60.551 41.667 0.00 0.00 0.00 3.51
793 1207 0.030101 TCGGGCAGCGTTTCTTTTTG 59.970 50.000 0.00 0.00 0.00 2.44
799 1213 1.352056 GCTTATCGGGCAGCGTTTC 59.648 57.895 0.00 0.00 0.00 2.78
805 1219 2.203209 GGGTGGCTTATCGGGCAG 60.203 66.667 0.00 0.00 42.30 4.85
806 1220 2.690881 AGGGTGGCTTATCGGGCA 60.691 61.111 0.00 0.00 39.45 5.36
813 1242 0.906066 TATCGTTGCAGGGTGGCTTA 59.094 50.000 0.00 0.00 34.04 3.09
874 1303 2.279069 CCGGCCTGTGAGTGAGAGT 61.279 63.158 0.00 0.00 0.00 3.24
983 1433 1.005975 CCATTTCTTGTCGTCGCGATC 60.006 52.381 14.06 7.04 38.42 3.69
1058 1508 0.173481 TGACTTTCGGGCGAGATCAG 59.827 55.000 0.00 0.00 0.00 2.90
1059 1509 0.606096 TTGACTTTCGGGCGAGATCA 59.394 50.000 0.00 0.00 0.00 2.92
1061 1511 1.804748 GTTTTGACTTTCGGGCGAGAT 59.195 47.619 0.00 0.00 0.00 2.75
1062 1512 1.223187 GTTTTGACTTTCGGGCGAGA 58.777 50.000 0.00 0.00 0.00 4.04
1066 1516 2.699251 AATCGTTTTGACTTTCGGGC 57.301 45.000 0.00 0.00 0.00 6.13
1070 1520 4.781528 CGGATCGAAATCGTTTTGACTTTC 59.218 41.667 2.41 0.00 40.80 2.62
1071 1521 4.212636 ACGGATCGAAATCGTTTTGACTTT 59.787 37.500 2.41 0.00 40.80 2.66
1072 1522 3.744426 ACGGATCGAAATCGTTTTGACTT 59.256 39.130 2.41 0.00 40.80 3.01
1073 1523 3.323243 ACGGATCGAAATCGTTTTGACT 58.677 40.909 2.41 0.00 40.80 3.41
1074 1524 3.717350 ACGGATCGAAATCGTTTTGAC 57.283 42.857 2.41 0.00 40.80 3.18
1082 1552 5.332355 CGAATCAAACCTACGGATCGAAATC 60.332 44.000 0.00 0.00 0.00 2.17
1155 1629 7.390027 AGTGAATAACAGCACAACTAGAATCT 58.610 34.615 0.00 0.00 37.48 2.40
1157 1631 7.986085 AAGTGAATAACAGCACAACTAGAAT 57.014 32.000 0.00 0.00 37.48 2.40
1184 1658 5.589050 GGTTGGGACTGGACAAGAATAATAC 59.411 44.000 0.00 0.00 0.00 1.89
1185 1659 5.339695 GGGTTGGGACTGGACAAGAATAATA 60.340 44.000 0.00 0.00 0.00 0.98
1186 1660 4.569865 GGGTTGGGACTGGACAAGAATAAT 60.570 45.833 0.00 0.00 0.00 1.28
1211 1686 2.012673 GAGGAGCTGTTGTATTGGCTG 58.987 52.381 0.00 0.00 35.01 4.85
1219 1694 1.980765 TGAGGATTGAGGAGCTGTTGT 59.019 47.619 0.00 0.00 0.00 3.32
1243 1718 5.485708 TGAAACTCCAAAGGGAAAAGGAAAA 59.514 36.000 0.00 0.00 44.38 2.29
1248 1723 7.524717 TTATCTGAAACTCCAAAGGGAAAAG 57.475 36.000 0.00 0.00 44.38 2.27
1250 1725 8.390921 AGTATTATCTGAAACTCCAAAGGGAAA 58.609 33.333 0.00 0.00 44.38 3.13
1253 1728 8.705594 TCTAGTATTATCTGAAACTCCAAAGGG 58.294 37.037 0.00 0.00 0.00 3.95
1282 1757 2.408271 TCTGAAACTGCATGGCTAGG 57.592 50.000 0.00 0.00 0.00 3.02
1288 1921 9.053840 AGTTCATCTATTATCTGAAACTGCATG 57.946 33.333 0.00 0.00 31.21 4.06
1331 1977 6.923508 CCTTTTTCTTTTTACTGTCATCACCC 59.076 38.462 0.00 0.00 0.00 4.61
1381 2039 1.510844 GCCGGCAATAACCACCTTG 59.489 57.895 24.80 0.00 0.00 3.61
1416 2074 3.424433 CGAATGGCCTCACGTTCTTTTAC 60.424 47.826 3.32 0.00 34.89 2.01
1417 2075 2.739913 CGAATGGCCTCACGTTCTTTTA 59.260 45.455 3.32 0.00 34.89 1.52
1438 2096 1.593006 CTTGATATCGACCCGTGTTGC 59.407 52.381 0.00 0.00 0.00 4.17
1470 2128 7.777440 TGTATATCCAGCTCCACAGATAGATAG 59.223 40.741 0.00 0.00 0.00 2.08
1504 2162 5.461032 TGACGCCTAACCAAAATTGATTT 57.539 34.783 0.00 0.00 0.00 2.17
1505 2163 5.010617 ACTTGACGCCTAACCAAAATTGATT 59.989 36.000 0.00 0.00 0.00 2.57
1506 2164 4.522789 ACTTGACGCCTAACCAAAATTGAT 59.477 37.500 0.00 0.00 0.00 2.57
1507 2165 3.886505 ACTTGACGCCTAACCAAAATTGA 59.113 39.130 0.00 0.00 0.00 2.57
1508 2166 4.226761 GACTTGACGCCTAACCAAAATTG 58.773 43.478 0.00 0.00 0.00 2.32
1560 2222 3.056250 CCATCTACACTGTTCTGCTCTGT 60.056 47.826 0.00 0.00 0.00 3.41
1624 2289 9.770097 GAAACTATTGATAGTCTCATGGAATGA 57.230 33.333 4.26 0.00 46.24 2.57
1650 2319 8.752766 AAGCATTGAAAATGTTGTTGATCTAG 57.247 30.769 0.00 0.00 0.00 2.43
1666 2335 7.643569 TTCAGGCTGAATAATAAGCATTGAA 57.356 32.000 25.38 0.00 41.36 2.69
1685 2354 7.664731 AGATTAGATGTGCCTAATGATTTCAGG 59.335 37.037 0.00 0.00 38.91 3.86
1764 2436 3.642705 GCCAGAATTCAGAAACCACAAC 58.357 45.455 8.44 0.00 0.00 3.32
1770 2442 2.319472 GCAACGCCAGAATTCAGAAAC 58.681 47.619 8.44 0.00 0.00 2.78
1824 2533 2.529619 GCGATGAAGCGAGGAAGCC 61.530 63.158 0.00 0.00 38.01 4.35
2017 2726 2.614013 GGGGAAGAGAGGGGCCAA 60.614 66.667 4.39 0.00 0.00 4.52
2043 2752 2.107953 GTGAGCTCCTGCCGGATC 59.892 66.667 12.15 0.00 39.01 3.36
2047 2756 4.504916 CTCCGTGAGCTCCTGCCG 62.505 72.222 12.15 8.15 40.80 5.69
2121 2830 0.739462 TTTACCTGATCAGCGGCGTG 60.739 55.000 17.76 5.92 0.00 5.34
2145 2854 1.081892 ATCACGACAGCAACAGCATC 58.918 50.000 0.00 0.00 0.00 3.91
2146 2855 1.466167 GAATCACGACAGCAACAGCAT 59.534 47.619 0.00 0.00 0.00 3.79
2147 2856 0.867746 GAATCACGACAGCAACAGCA 59.132 50.000 0.00 0.00 0.00 4.41
2148 2857 0.867746 TGAATCACGACAGCAACAGC 59.132 50.000 0.00 0.00 0.00 4.40
2152 2861 1.071542 TCCCTTGAATCACGACAGCAA 59.928 47.619 0.00 0.00 0.00 3.91
2153 2862 0.684535 TCCCTTGAATCACGACAGCA 59.315 50.000 0.00 0.00 0.00 4.41
2157 2866 0.389948 ACGCTCCCTTGAATCACGAC 60.390 55.000 0.00 0.00 0.00 4.34
2159 2868 1.361668 CCACGCTCCCTTGAATCACG 61.362 60.000 0.00 0.00 0.00 4.35
2161 2870 0.250234 CTCCACGCTCCCTTGAATCA 59.750 55.000 0.00 0.00 0.00 2.57
2162 2871 0.250513 ACTCCACGCTCCCTTGAATC 59.749 55.000 0.00 0.00 0.00 2.52
2163 2872 1.568504 TACTCCACGCTCCCTTGAAT 58.431 50.000 0.00 0.00 0.00 2.57
2168 2896 1.002087 CTTGTTTACTCCACGCTCCCT 59.998 52.381 0.00 0.00 0.00 4.20
2184 2912 2.621407 CCCTGCCATATCAACACCTTGT 60.621 50.000 0.00 0.00 0.00 3.16
2185 2913 2.026641 CCCTGCCATATCAACACCTTG 58.973 52.381 0.00 0.00 0.00 3.61
2186 2914 1.686115 GCCCTGCCATATCAACACCTT 60.686 52.381 0.00 0.00 0.00 3.50
2187 2915 0.106519 GCCCTGCCATATCAACACCT 60.107 55.000 0.00 0.00 0.00 4.00
2188 2916 2.419057 GCCCTGCCATATCAACACC 58.581 57.895 0.00 0.00 0.00 4.16
2961 3694 5.064452 CAGATAAGGAGTTGCAGTGATGAAC 59.936 44.000 0.00 0.00 0.00 3.18
2964 3697 4.511527 ACAGATAAGGAGTTGCAGTGATG 58.488 43.478 0.00 0.00 0.00 3.07
3020 3758 1.286354 CCTGCACAAATGGCTTTGCG 61.286 55.000 8.64 2.54 44.63 4.85
3070 3809 3.507622 CGAGCTCATACACATGGGAGATA 59.492 47.826 15.40 0.00 34.17 1.98
3143 3882 3.669536 TCGACTGCAAAATGTATGGACA 58.330 40.909 0.00 0.00 40.72 4.02
3144 3883 4.882671 ATCGACTGCAAAATGTATGGAC 57.117 40.909 0.00 0.00 0.00 4.02
3148 3887 5.351465 ACGAGAAATCGACTGCAAAATGTAT 59.649 36.000 4.44 0.00 36.85 2.29
3151 3890 4.070581 ACGAGAAATCGACTGCAAAATG 57.929 40.909 4.44 0.00 36.85 2.32
3159 3971 3.119779 GGTCAAGAGACGAGAAATCGACT 60.120 47.826 4.44 3.40 45.92 4.18
3162 3974 2.177977 CGGTCAAGAGACGAGAAATCG 58.822 52.381 0.00 0.00 45.92 3.34
3165 3977 1.679680 ACACGGTCAAGAGACGAGAAA 59.320 47.619 0.00 0.00 45.92 2.52
3179 3991 4.038763 TCTGAGTGAGTTCAAATACACGGT 59.961 41.667 0.00 0.00 38.15 4.83
3181 3993 4.982295 TGTCTGAGTGAGTTCAAATACACG 59.018 41.667 0.00 0.00 38.15 4.49
3182 3994 7.360438 GGAATGTCTGAGTGAGTTCAAATACAC 60.360 40.741 0.00 0.00 0.00 2.90
3183 3995 6.650807 GGAATGTCTGAGTGAGTTCAAATACA 59.349 38.462 0.00 0.00 0.00 2.29
3184 3996 6.876257 AGGAATGTCTGAGTGAGTTCAAATAC 59.124 38.462 0.00 0.00 0.00 1.89
3185 3997 7.009179 AGGAATGTCTGAGTGAGTTCAAATA 57.991 36.000 0.00 0.00 0.00 1.40
3186 3998 5.874093 AGGAATGTCTGAGTGAGTTCAAAT 58.126 37.500 0.00 0.00 0.00 2.32
3187 3999 5.296151 AGGAATGTCTGAGTGAGTTCAAA 57.704 39.130 0.00 0.00 0.00 2.69
3189 4001 4.635223 CAAGGAATGTCTGAGTGAGTTCA 58.365 43.478 0.00 0.00 0.00 3.18
3190 4002 3.434984 GCAAGGAATGTCTGAGTGAGTTC 59.565 47.826 0.00 0.00 0.00 3.01
3191 4003 3.406764 GCAAGGAATGTCTGAGTGAGTT 58.593 45.455 0.00 0.00 0.00 3.01
3192 4004 2.289945 GGCAAGGAATGTCTGAGTGAGT 60.290 50.000 0.00 0.00 0.00 3.41
3193 4005 2.027377 AGGCAAGGAATGTCTGAGTGAG 60.027 50.000 0.00 0.00 44.05 3.51
3194 4006 1.980765 AGGCAAGGAATGTCTGAGTGA 59.019 47.619 0.00 0.00 44.05 3.41
3195 4007 2.486472 AGGCAAGGAATGTCTGAGTG 57.514 50.000 0.00 0.00 44.05 3.51
3243 4055 1.234615 CCTCCGTCCGTGCAAATTGT 61.235 55.000 0.00 0.00 0.00 2.71
3483 4295 7.244886 TCAATCTCTGAACCTCTAACATCAA 57.755 36.000 0.00 0.00 0.00 2.57
3495 4307 7.816995 ACACTGTTCTTCTATCAATCTCTGAAC 59.183 37.037 0.00 0.00 37.67 3.18
3517 4329 2.344592 TGTATCCCAACTTCCCACACT 58.655 47.619 0.00 0.00 0.00 3.55
3529 4341 8.052141 TCACATTGTTCATCTTATTGTATCCCA 58.948 33.333 0.00 0.00 0.00 4.37
3532 4344 7.584123 GCGTCACATTGTTCATCTTATTGTATC 59.416 37.037 0.00 0.00 0.00 2.24
3596 4408 4.616835 GCAGAAGCCAAAAGGTAACATCTG 60.617 45.833 0.00 0.00 35.92 2.90
3626 4438 9.927081 AAACTAGGATGGAATGTATCAAGAATT 57.073 29.630 0.00 0.00 0.00 2.17
3676 4488 3.576550 GGGGCAATGGTGAAAAGTTAGAA 59.423 43.478 0.00 0.00 0.00 2.10
3678 4490 2.233676 GGGGGCAATGGTGAAAAGTTAG 59.766 50.000 0.00 0.00 0.00 2.34
3680 4492 1.055849 GGGGGCAATGGTGAAAAGTT 58.944 50.000 0.00 0.00 0.00 2.66
3682 4494 0.321346 GTGGGGGCAATGGTGAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
3683 4495 0.399091 TGTGGGGGCAATGGTGAAAA 60.399 50.000 0.00 0.00 0.00 2.29
3684 4496 0.399091 TTGTGGGGGCAATGGTGAAA 60.399 50.000 0.00 0.00 0.00 2.69
3727 4541 6.093219 CCCTAAGAAATGACAGTCAGACAATG 59.907 42.308 9.64 0.00 0.00 2.82
3728 4542 6.176183 CCCTAAGAAATGACAGTCAGACAAT 58.824 40.000 9.64 0.00 0.00 2.71
3729 4543 5.551233 CCCTAAGAAATGACAGTCAGACAA 58.449 41.667 9.64 0.00 0.00 3.18
3730 4544 4.563580 GCCCTAAGAAATGACAGTCAGACA 60.564 45.833 9.64 0.00 0.00 3.41
3731 4545 3.935828 GCCCTAAGAAATGACAGTCAGAC 59.064 47.826 9.64 3.15 0.00 3.51
3732 4546 3.840666 AGCCCTAAGAAATGACAGTCAGA 59.159 43.478 9.64 0.00 0.00 3.27
3733 4547 4.213564 AGCCCTAAGAAATGACAGTCAG 57.786 45.455 9.64 0.00 0.00 3.51
3734 4548 4.640771 AAGCCCTAAGAAATGACAGTCA 57.359 40.909 5.50 5.50 0.00 3.41
3735 4549 6.038714 CCAATAAGCCCTAAGAAATGACAGTC 59.961 42.308 0.00 0.00 0.00 3.51
3861 4676 7.148457 GGTTTCGACTCCTACAAAATTTAGAGG 60.148 40.741 6.61 6.61 0.00 3.69
3866 4681 7.935210 TCTTAGGTTTCGACTCCTACAAAATTT 59.065 33.333 12.58 0.00 36.24 1.82
3867 4682 7.447594 TCTTAGGTTTCGACTCCTACAAAATT 58.552 34.615 12.58 0.00 36.24 1.82
3912 4731 3.777106 TGCCTCAGACATCTCAAAGTT 57.223 42.857 0.00 0.00 0.00 2.66
3914 4733 3.935315 TCTTGCCTCAGACATCTCAAAG 58.065 45.455 0.00 0.00 0.00 2.77
3921 4740 9.851686 TTTACATAAATATCTTGCCTCAGACAT 57.148 29.630 0.00 0.00 0.00 3.06
3955 4774 5.212589 ACAAAGTTGTCGTGTAGTTGTTC 57.787 39.130 0.00 0.00 36.50 3.18
3962 4781 5.239087 GGGGATTTTACAAAGTTGTCGTGTA 59.761 40.000 0.00 0.00 42.35 2.90
3966 4785 3.251487 ACGGGGATTTTACAAAGTTGTCG 59.749 43.478 0.00 0.00 42.35 4.35
3982 4801 5.867330 TGTATTTCTAAAGAAACACGGGGA 58.133 37.500 7.29 0.00 42.57 4.81
4014 4833 9.862371 TTGTTTGTGAGTGTTTGTATTTGTATT 57.138 25.926 0.00 0.00 0.00 1.89
4015 4834 9.515020 CTTGTTTGTGAGTGTTTGTATTTGTAT 57.485 29.630 0.00 0.00 0.00 2.29
4016 4835 8.516234 ACTTGTTTGTGAGTGTTTGTATTTGTA 58.484 29.630 0.00 0.00 0.00 2.41
4017 4836 7.375053 ACTTGTTTGTGAGTGTTTGTATTTGT 58.625 30.769 0.00 0.00 0.00 2.83
4018 4837 7.810766 ACTTGTTTGTGAGTGTTTGTATTTG 57.189 32.000 0.00 0.00 0.00 2.32
4019 4838 8.516234 TGTACTTGTTTGTGAGTGTTTGTATTT 58.484 29.630 0.00 0.00 0.00 1.40
4020 4839 8.046294 TGTACTTGTTTGTGAGTGTTTGTATT 57.954 30.769 0.00 0.00 0.00 1.89
4021 4840 7.618502 TGTACTTGTTTGTGAGTGTTTGTAT 57.381 32.000 0.00 0.00 0.00 2.29
4022 4841 7.618502 ATGTACTTGTTTGTGAGTGTTTGTA 57.381 32.000 0.00 0.00 0.00 2.41
4023 4842 5.950758 TGTACTTGTTTGTGAGTGTTTGT 57.049 34.783 0.00 0.00 0.00 2.83
4024 4843 9.594038 GTATATGTACTTGTTTGTGAGTGTTTG 57.406 33.333 0.00 0.00 0.00 2.93
4025 4844 9.555727 AGTATATGTACTTGTTTGTGAGTGTTT 57.444 29.630 0.00 0.00 37.94 2.83
4026 4845 9.204570 GAGTATATGTACTTGTTTGTGAGTGTT 57.795 33.333 3.42 0.00 41.19 3.32
4030 4849 7.277981 GGGTGAGTATATGTACTTGTTTGTGAG 59.722 40.741 3.42 0.00 41.19 3.51
4040 4859 7.449395 TGCGTTTATAGGGTGAGTATATGTACT 59.551 37.037 1.18 1.18 43.76 2.73
4044 4863 6.365247 GTGTGCGTTTATAGGGTGAGTATATG 59.635 42.308 0.00 0.00 0.00 1.78
4048 4867 3.427909 CGTGTGCGTTTATAGGGTGAGTA 60.428 47.826 0.00 0.00 0.00 2.59
4052 4871 0.372334 GCGTGTGCGTTTATAGGGTG 59.628 55.000 0.00 0.00 40.81 4.61
4053 4872 2.758497 GCGTGTGCGTTTATAGGGT 58.242 52.632 0.00 0.00 40.81 4.34
4064 4883 4.589700 CGGTGTGTGTGCGTGTGC 62.590 66.667 0.00 0.00 43.20 4.57
4065 4884 1.218875 ATACGGTGTGTGTGCGTGTG 61.219 55.000 0.00 0.00 0.00 3.82
4066 4885 0.942410 GATACGGTGTGTGTGCGTGT 60.942 55.000 0.00 0.00 0.00 4.49
4067 4886 1.623081 GGATACGGTGTGTGTGCGTG 61.623 60.000 0.00 0.00 0.00 5.34
4068 4887 1.373748 GGATACGGTGTGTGTGCGT 60.374 57.895 0.00 0.00 0.00 5.24
4069 4888 2.098233 GGGATACGGTGTGTGTGCG 61.098 63.158 0.00 0.00 30.53 5.34
4070 4889 2.098233 CGGGATACGGTGTGTGTGC 61.098 63.158 0.00 0.00 39.42 4.57
4071 4890 4.178861 CGGGATACGGTGTGTGTG 57.821 61.111 0.00 0.00 39.42 3.82
4081 4900 0.103208 CTCAGTGCTCACCGGGATAC 59.897 60.000 6.32 3.19 0.00 2.24
4082 4901 0.324368 ACTCAGTGCTCACCGGGATA 60.324 55.000 6.32 0.00 0.00 2.59
4083 4902 1.608717 GACTCAGTGCTCACCGGGAT 61.609 60.000 6.32 0.00 0.00 3.85
4084 4903 2.203640 ACTCAGTGCTCACCGGGA 60.204 61.111 6.32 0.00 0.00 5.14
4085 4904 2.262915 GACTCAGTGCTCACCGGG 59.737 66.667 6.32 0.00 0.00 5.73
4087 4906 0.799917 CATCGACTCAGTGCTCACCG 60.800 60.000 0.00 0.00 0.00 4.94
4088 4907 0.459237 CCATCGACTCAGTGCTCACC 60.459 60.000 0.00 0.00 0.00 4.02
4089 4908 0.459237 CCCATCGACTCAGTGCTCAC 60.459 60.000 0.00 0.00 0.00 3.51
4090 4909 0.900182 ACCCATCGACTCAGTGCTCA 60.900 55.000 0.00 0.00 0.00 4.26
4091 4910 0.247736 AACCCATCGACTCAGTGCTC 59.752 55.000 0.00 0.00 0.00 4.26
4092 4911 0.687354 AAACCCATCGACTCAGTGCT 59.313 50.000 0.00 0.00 0.00 4.40
4093 4912 1.197721 CAAAACCCATCGACTCAGTGC 59.802 52.381 0.00 0.00 0.00 4.40
4094 4913 1.806542 CCAAAACCCATCGACTCAGTG 59.193 52.381 0.00 0.00 0.00 3.66
4095 4914 1.420138 ACCAAAACCCATCGACTCAGT 59.580 47.619 0.00 0.00 0.00 3.41
4096 4915 2.185004 ACCAAAACCCATCGACTCAG 57.815 50.000 0.00 0.00 0.00 3.35
4098 4917 2.864343 CGATACCAAAACCCATCGACTC 59.136 50.000 0.00 0.00 42.11 3.36
4099 4918 2.498481 TCGATACCAAAACCCATCGACT 59.502 45.455 1.69 0.00 43.00 4.18
4102 4921 3.462982 TCATCGATACCAAAACCCATCG 58.537 45.455 0.00 0.00 41.17 3.84
4103 4922 4.881850 ACTTCATCGATACCAAAACCCATC 59.118 41.667 0.00 0.00 0.00 3.51
4104 4923 4.855340 ACTTCATCGATACCAAAACCCAT 58.145 39.130 0.00 0.00 0.00 4.00
4105 4924 4.258543 GACTTCATCGATACCAAAACCCA 58.741 43.478 0.00 0.00 0.00 4.51
4106 4925 4.094442 GTGACTTCATCGATACCAAAACCC 59.906 45.833 0.00 0.00 0.00 4.11
4107 4926 4.094442 GGTGACTTCATCGATACCAAAACC 59.906 45.833 7.72 4.72 0.00 3.27
4109 4928 4.693566 GTGGTGACTTCATCGATACCAAAA 59.306 41.667 15.32 0.00 39.63 2.44
4110 4929 4.250464 GTGGTGACTTCATCGATACCAAA 58.750 43.478 15.32 0.40 39.63 3.28
4111 4930 3.259625 TGTGGTGACTTCATCGATACCAA 59.740 43.478 15.32 5.63 39.63 3.67
4112 4931 2.829120 TGTGGTGACTTCATCGATACCA 59.171 45.455 10.71 10.71 35.97 3.25
4115 4934 4.332543 GCATTTGTGGTGACTTCATCGATA 59.667 41.667 0.00 0.00 0.00 2.92
4118 4947 2.414559 GGCATTTGTGGTGACTTCATCG 60.415 50.000 0.00 0.00 0.00 3.84
4121 4950 2.229792 GAGGCATTTGTGGTGACTTCA 58.770 47.619 0.00 0.00 34.36 3.02
4127 4956 1.812571 GGTAGTGAGGCATTTGTGGTG 59.187 52.381 0.00 0.00 0.00 4.17
4130 4959 2.095768 CGTTGGTAGTGAGGCATTTGTG 60.096 50.000 0.00 0.00 0.00 3.33
4135 4964 0.907704 TCCCGTTGGTAGTGAGGCAT 60.908 55.000 0.00 0.00 0.00 4.40
4138 4967 0.682852 TGTTCCCGTTGGTAGTGAGG 59.317 55.000 0.00 0.00 0.00 3.86
4141 4970 1.199097 GCAATGTTCCCGTTGGTAGTG 59.801 52.381 0.00 0.00 37.92 2.74
4142 4971 1.530323 GCAATGTTCCCGTTGGTAGT 58.470 50.000 0.00 0.00 37.92 2.73
4146 4975 0.243636 GAAGGCAATGTTCCCGTTGG 59.756 55.000 0.00 0.00 37.92 3.77
4148 4977 1.923356 ATGAAGGCAATGTTCCCGTT 58.077 45.000 0.00 0.00 0.00 4.44
4159 4988 9.723601 AAGCAAAATATTCTTTTAATGAAGGCA 57.276 25.926 0.00 0.00 0.00 4.75
4170 5000 9.914131 GTGTCTCCTAAAAGCAAAATATTCTTT 57.086 29.630 0.00 0.00 0.00 2.52
4173 5003 7.826690 TGGTGTCTCCTAAAAGCAAAATATTC 58.173 34.615 0.00 0.00 37.07 1.75
4199 5029 4.278669 GGATCAATCTCAGGTTAGACGCTA 59.721 45.833 0.00 0.00 0.00 4.26
4233 5063 3.105959 TGGGTAAGAGGGTAGTGGTAC 57.894 52.381 0.00 0.00 0.00 3.34
4234 5064 3.374540 GGATGGGTAAGAGGGTAGTGGTA 60.375 52.174 0.00 0.00 0.00 3.25
4235 5065 2.628829 GGATGGGTAAGAGGGTAGTGGT 60.629 54.545 0.00 0.00 0.00 4.16
4236 5066 2.047830 GGATGGGTAAGAGGGTAGTGG 58.952 57.143 0.00 0.00 0.00 4.00
4237 5067 3.047695 AGGATGGGTAAGAGGGTAGTG 57.952 52.381 0.00 0.00 0.00 2.74
4238 5068 5.518725 GCTATAGGATGGGTAAGAGGGTAGT 60.519 48.000 1.04 0.00 0.00 2.73
4239 5069 4.957327 GCTATAGGATGGGTAAGAGGGTAG 59.043 50.000 1.04 0.00 0.00 3.18
4240 5070 4.611150 AGCTATAGGATGGGTAAGAGGGTA 59.389 45.833 1.04 0.00 0.00 3.69
4241 5071 3.406498 AGCTATAGGATGGGTAAGAGGGT 59.594 47.826 1.04 0.00 0.00 4.34
4242 5072 4.067944 AGCTATAGGATGGGTAAGAGGG 57.932 50.000 1.04 0.00 0.00 4.30
4243 5073 6.436027 TGATAGCTATAGGATGGGTAAGAGG 58.564 44.000 6.13 0.00 0.00 3.69
4244 5074 7.962995 TTGATAGCTATAGGATGGGTAAGAG 57.037 40.000 6.13 0.00 0.00 2.85
4247 5077 8.705594 GCTTATTGATAGCTATAGGATGGGTAA 58.294 37.037 6.13 0.00 35.74 2.85
4248 5078 8.068110 AGCTTATTGATAGCTATAGGATGGGTA 58.932 37.037 6.13 0.00 46.66 3.69
4249 5079 6.905776 AGCTTATTGATAGCTATAGGATGGGT 59.094 38.462 6.13 0.00 46.66 4.51
4250 5080 7.215789 CAGCTTATTGATAGCTATAGGATGGG 58.784 42.308 6.13 0.00 46.80 4.00
4251 5081 7.147585 ACCAGCTTATTGATAGCTATAGGATGG 60.148 40.741 21.00 21.00 46.80 3.51
4252 5082 7.790027 ACCAGCTTATTGATAGCTATAGGATG 58.210 38.462 6.13 0.50 46.80 3.51
4253 5083 7.621285 TGACCAGCTTATTGATAGCTATAGGAT 59.379 37.037 6.13 3.95 46.80 3.24
4254 5084 6.954102 TGACCAGCTTATTGATAGCTATAGGA 59.046 38.462 6.13 0.00 46.80 2.94
4255 5085 7.038659 GTGACCAGCTTATTGATAGCTATAGG 58.961 42.308 6.13 0.00 46.80 2.57
4256 5086 7.835822 AGTGACCAGCTTATTGATAGCTATAG 58.164 38.462 6.13 0.95 46.80 1.31
4257 5087 7.782897 AGTGACCAGCTTATTGATAGCTATA 57.217 36.000 6.13 0.00 46.80 1.31
4258 5088 6.678568 AGTGACCAGCTTATTGATAGCTAT 57.321 37.500 5.76 5.76 46.80 2.97
4259 5089 6.463049 GGAAGTGACCAGCTTATTGATAGCTA 60.463 42.308 0.00 0.00 46.80 3.32
4261 5091 4.513318 GGAAGTGACCAGCTTATTGATAGC 59.487 45.833 0.00 0.00 38.93 2.97
4262 5092 5.923204 AGGAAGTGACCAGCTTATTGATAG 58.077 41.667 0.00 0.00 0.00 2.08
4263 5093 5.663106 AGAGGAAGTGACCAGCTTATTGATA 59.337 40.000 0.00 0.00 0.00 2.15
4264 5094 4.472833 AGAGGAAGTGACCAGCTTATTGAT 59.527 41.667 0.00 0.00 0.00 2.57
4265 5095 3.840666 AGAGGAAGTGACCAGCTTATTGA 59.159 43.478 0.00 0.00 0.00 2.57
4266 5096 4.213564 AGAGGAAGTGACCAGCTTATTG 57.786 45.455 0.00 0.00 0.00 1.90
4267 5097 4.141824 GCTAGAGGAAGTGACCAGCTTATT 60.142 45.833 0.00 0.00 0.00 1.40
4268 5098 3.386402 GCTAGAGGAAGTGACCAGCTTAT 59.614 47.826 0.00 0.00 0.00 1.73
4269 5099 2.761208 GCTAGAGGAAGTGACCAGCTTA 59.239 50.000 0.00 0.00 0.00 3.09
4270 5100 1.552792 GCTAGAGGAAGTGACCAGCTT 59.447 52.381 0.00 0.00 0.00 3.74
4271 5101 1.190643 GCTAGAGGAAGTGACCAGCT 58.809 55.000 0.00 0.00 0.00 4.24
4272 5102 1.190643 AGCTAGAGGAAGTGACCAGC 58.809 55.000 0.00 0.00 0.00 4.85
4273 5103 3.513515 AGAAAGCTAGAGGAAGTGACCAG 59.486 47.826 0.00 0.00 0.00 4.00
4274 5104 3.511477 AGAAAGCTAGAGGAAGTGACCA 58.489 45.455 0.00 0.00 0.00 4.02
4275 5105 5.862678 ATAGAAAGCTAGAGGAAGTGACC 57.137 43.478 0.00 0.00 0.00 4.02
4276 5106 6.097696 AGGAATAGAAAGCTAGAGGAAGTGAC 59.902 42.308 0.00 0.00 0.00 3.67
4277 5107 6.198639 AGGAATAGAAAGCTAGAGGAAGTGA 58.801 40.000 0.00 0.00 0.00 3.41
4278 5108 6.478512 AGGAATAGAAAGCTAGAGGAAGTG 57.521 41.667 0.00 0.00 0.00 3.16
4279 5109 7.037945 ACAAAGGAATAGAAAGCTAGAGGAAGT 60.038 37.037 0.00 0.00 0.00 3.01
4280 5110 7.334858 ACAAAGGAATAGAAAGCTAGAGGAAG 58.665 38.462 0.00 0.00 0.00 3.46
4281 5111 7.259088 ACAAAGGAATAGAAAGCTAGAGGAA 57.741 36.000 0.00 0.00 0.00 3.36
4282 5112 6.875972 ACAAAGGAATAGAAAGCTAGAGGA 57.124 37.500 0.00 0.00 0.00 3.71
4283 5113 6.256757 CGAACAAAGGAATAGAAAGCTAGAGG 59.743 42.308 0.00 0.00 0.00 3.69
4284 5114 6.814146 ACGAACAAAGGAATAGAAAGCTAGAG 59.186 38.462 0.00 0.00 0.00 2.43
4285 5115 6.590292 CACGAACAAAGGAATAGAAAGCTAGA 59.410 38.462 0.00 0.00 0.00 2.43
4286 5116 6.183360 CCACGAACAAAGGAATAGAAAGCTAG 60.183 42.308 0.00 0.00 0.00 3.42
4287 5117 5.642063 CCACGAACAAAGGAATAGAAAGCTA 59.358 40.000 0.00 0.00 0.00 3.32
4288 5118 4.455877 CCACGAACAAAGGAATAGAAAGCT 59.544 41.667 0.00 0.00 0.00 3.74
4289 5119 4.379499 CCCACGAACAAAGGAATAGAAAGC 60.379 45.833 0.00 0.00 0.00 3.51
4290 5120 5.001232 TCCCACGAACAAAGGAATAGAAAG 58.999 41.667 0.00 0.00 0.00 2.62
4291 5121 4.975631 TCCCACGAACAAAGGAATAGAAA 58.024 39.130 0.00 0.00 0.00 2.52
4292 5122 4.627284 TCCCACGAACAAAGGAATAGAA 57.373 40.909 0.00 0.00 0.00 2.10
4293 5123 4.513442 CATCCCACGAACAAAGGAATAGA 58.487 43.478 0.00 0.00 30.71 1.98
4294 5124 3.627577 CCATCCCACGAACAAAGGAATAG 59.372 47.826 0.00 0.00 30.71 1.73
4295 5125 3.009695 ACCATCCCACGAACAAAGGAATA 59.990 43.478 0.00 0.00 30.71 1.75
4296 5126 2.225017 ACCATCCCACGAACAAAGGAAT 60.225 45.455 0.00 0.00 30.71 3.01
4297 5127 1.144093 ACCATCCCACGAACAAAGGAA 59.856 47.619 0.00 0.00 30.71 3.36
4298 5128 0.768622 ACCATCCCACGAACAAAGGA 59.231 50.000 0.00 0.00 0.00 3.36
4299 5129 2.483014 TACCATCCCACGAACAAAGG 57.517 50.000 0.00 0.00 0.00 3.11
4300 5130 5.050363 CGATATTACCATCCCACGAACAAAG 60.050 44.000 0.00 0.00 0.00 2.77
4301 5131 4.812091 CGATATTACCATCCCACGAACAAA 59.188 41.667 0.00 0.00 0.00 2.83
4302 5132 4.141892 ACGATATTACCATCCCACGAACAA 60.142 41.667 0.00 0.00 0.00 2.83
4303 5133 3.385433 ACGATATTACCATCCCACGAACA 59.615 43.478 0.00 0.00 0.00 3.18
4304 5134 3.986277 ACGATATTACCATCCCACGAAC 58.014 45.455 0.00 0.00 0.00 3.95
4305 5135 4.828939 ACTACGATATTACCATCCCACGAA 59.171 41.667 0.00 0.00 0.00 3.85
4306 5136 4.401022 ACTACGATATTACCATCCCACGA 58.599 43.478 0.00 0.00 0.00 4.35
4307 5137 4.778534 ACTACGATATTACCATCCCACG 57.221 45.455 0.00 0.00 0.00 4.94
4308 5138 8.411683 CCTATTACTACGATATTACCATCCCAC 58.588 40.741 0.00 0.00 0.00 4.61
4309 5139 8.338493 TCCTATTACTACGATATTACCATCCCA 58.662 37.037 0.00 0.00 0.00 4.37
4310 5140 8.757982 TCCTATTACTACGATATTACCATCCC 57.242 38.462 0.00 0.00 0.00 3.85
4376 5206 9.288576 TGTGTGTCAAATGATATCTTTTTCTCT 57.711 29.630 12.58 0.00 0.00 3.10
4404 5234 9.262358 GCCTAGACTCAACGATAAAATTCTATT 57.738 33.333 0.00 0.00 0.00 1.73
4405 5235 8.643324 AGCCTAGACTCAACGATAAAATTCTAT 58.357 33.333 0.00 0.00 0.00 1.98
4406 5236 8.008513 AGCCTAGACTCAACGATAAAATTCTA 57.991 34.615 0.00 0.00 0.00 2.10
4407 5237 6.879400 AGCCTAGACTCAACGATAAAATTCT 58.121 36.000 0.00 0.00 0.00 2.40
4408 5238 8.644318 TTAGCCTAGACTCAACGATAAAATTC 57.356 34.615 0.00 0.00 0.00 2.17
4439 5269 6.202570 CCAATCCTTCGCATTTCAAAGAAAAA 59.797 34.615 0.00 0.00 0.00 1.94
4440 5270 5.695816 CCAATCCTTCGCATTTCAAAGAAAA 59.304 36.000 0.00 0.00 0.00 2.29
4441 5271 5.221422 ACCAATCCTTCGCATTTCAAAGAAA 60.221 36.000 0.00 0.00 0.00 2.52
4442 5272 4.280677 ACCAATCCTTCGCATTTCAAAGAA 59.719 37.500 0.00 0.00 0.00 2.52
4443 5273 3.826157 ACCAATCCTTCGCATTTCAAAGA 59.174 39.130 0.00 0.00 0.00 2.52
4444 5274 4.178545 ACCAATCCTTCGCATTTCAAAG 57.821 40.909 0.00 0.00 0.00 2.77
4445 5275 4.555262 GAACCAATCCTTCGCATTTCAAA 58.445 39.130 0.00 0.00 0.00 2.69
4446 5276 3.056891 GGAACCAATCCTTCGCATTTCAA 60.057 43.478 0.00 0.00 45.56 2.69
4447 5277 2.491693 GGAACCAATCCTTCGCATTTCA 59.508 45.455 0.00 0.00 45.56 2.69
4448 5278 3.150848 GGAACCAATCCTTCGCATTTC 57.849 47.619 0.00 0.00 45.56 2.17
4458 5288 6.301169 CCTATGTAGGATAGGAACCAATCC 57.699 45.833 0.00 0.00 46.75 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.