Multiple sequence alignment - TraesCS7A01G391500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G391500 chr7A 100.000 5437 0 0 1 5437 567575526 567580962 0.000000e+00 10041.0
1 TraesCS7A01G391500 chr7D 95.412 3814 135 22 836 4644 501088396 501092174 0.000000e+00 6037.0
2 TraesCS7A01G391500 chr7D 90.654 428 24 10 364 786 501087987 501088403 6.150000e-154 555.0
3 TraesCS7A01G391500 chr7D 96.789 218 5 2 101 317 501087795 501088011 4.000000e-96 363.0
4 TraesCS7A01G391500 chr7D 89.041 146 8 4 5298 5437 501092633 501092776 2.010000e-39 174.0
5 TraesCS7A01G391500 chr7B 92.642 3819 199 40 849 4644 530372785 530376544 0.000000e+00 5421.0
6 TraesCS7A01G391500 chr7B 81.193 654 67 29 1 624 530364436 530365063 4.930000e-130 475.0
7 TraesCS7A01G391500 chr7B 91.176 170 8 3 5274 5437 530376810 530376978 1.970000e-54 224.0
8 TraesCS7A01G391500 chr7B 87.129 101 3 4 766 857 530365071 530365170 7.450000e-19 106.0
9 TraesCS7A01G391500 chr5B 79.891 915 121 37 2963 3846 580105703 580104821 3.600000e-171 612.0
10 TraesCS7A01G391500 chr5B 84.672 411 53 5 2415 2817 580106515 580106107 8.480000e-108 401.0
11 TraesCS7A01G391500 chr5A 80.191 732 101 31 2963 3683 592295514 592294816 4.860000e-140 508.0
12 TraesCS7A01G391500 chr5A 80.882 612 69 26 2214 2817 592296444 592295873 6.470000e-119 438.0
13 TraesCS7A01G391500 chr5A 87.647 170 17 2 3681 3846 592294778 592294609 1.550000e-45 195.0
14 TraesCS7A01G391500 chr5A 82.474 97 14 2 510 603 575535143 575535239 1.260000e-11 82.4
15 TraesCS7A01G391500 chr5D 78.730 677 99 30 3016 3683 472739945 472739305 1.410000e-110 411.0
16 TraesCS7A01G391500 chr5D 78.361 610 76 30 2214 2817 472741126 472740567 1.450000e-90 344.0
17 TraesCS7A01G391500 chr5D 88.889 171 15 2 3681 3847 472739275 472739105 1.980000e-49 207.0
18 TraesCS7A01G391500 chr5D 100.000 29 0 0 5381 5409 55802895 55802867 3.000000e-03 54.7
19 TraesCS7A01G391500 chr2B 78.512 121 22 3 519 637 413082038 413082156 5.840000e-10 76.8
20 TraesCS7A01G391500 chr2A 90.909 44 3 1 510 553 461498613 461498655 2.120000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G391500 chr7A 567575526 567580962 5436 False 10041.000000 10041 100.000000 1 5437 1 chr7A.!!$F1 5436
1 TraesCS7A01G391500 chr7D 501087795 501092776 4981 False 1782.250000 6037 92.974000 101 5437 4 chr7D.!!$F1 5336
2 TraesCS7A01G391500 chr7B 530372785 530376978 4193 False 2822.500000 5421 91.909000 849 5437 2 chr7B.!!$F2 4588
3 TraesCS7A01G391500 chr7B 530364436 530365170 734 False 290.500000 475 84.161000 1 857 2 chr7B.!!$F1 856
4 TraesCS7A01G391500 chr5B 580104821 580106515 1694 True 506.500000 612 82.281500 2415 3846 2 chr5B.!!$R1 1431
5 TraesCS7A01G391500 chr5A 592294609 592296444 1835 True 380.333333 508 82.906667 2214 3846 3 chr5A.!!$R1 1632
6 TraesCS7A01G391500 chr5D 472739105 472741126 2021 True 320.666667 411 81.993333 2214 3847 3 chr5D.!!$R2 1633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
562 607 0.169672 TAGTTTCGAAGACCTCCGCG 59.830 55.000 0.0 0.0 34.32 6.46 F
988 1042 0.890683 TCGCTTCATCTCACTGCTCA 59.109 50.000 0.0 0.0 0.00 4.26 F
1741 1795 1.134367 TCAAAGGCGTCCGACTATCAG 59.866 52.381 0.0 0.0 30.17 2.90 F
2401 2464 2.039418 GAGGGGTTGAAGCAAAAAGGT 58.961 47.619 0.0 0.0 0.00 3.50 F
3898 4469 0.177604 AGAGAAGCTCAGCCAATCCG 59.822 55.000 0.0 0.0 32.06 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2137 2191 0.324943 AATGGTCTTCAGTGTCCCCG 59.675 55.000 0.00 0.0 0.00 5.73 R
2163 2217 2.440627 TCATCAAGGGTGCTGCTATCAT 59.559 45.455 0.00 0.0 0.00 2.45 R
3363 3885 3.427098 CCAGCATTGTTGACTAGTGCATG 60.427 47.826 0.00 0.0 38.23 4.06 R
3985 4556 0.595095 GTGCTCTGTTCTTTGCCCAG 59.405 55.000 0.00 0.0 0.00 4.45 R
5001 5588 0.040157 CAGCATGTTGGTTGGTGACG 60.040 55.000 0.85 0.0 43.50 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 174 4.823790 AAACAGAAAACCGCGAAAGTAT 57.176 36.364 8.23 0.00 0.00 2.12
208 222 2.780065 GCACAAACATGCTTCACTCA 57.220 45.000 0.00 0.00 42.62 3.41
325 340 4.012319 CACAGATGTGCTTCAACTATGC 57.988 45.455 0.00 0.00 39.39 3.14
329 344 4.634883 CAGATGTGCTTCAACTATGCTTCT 59.365 41.667 0.00 0.00 0.00 2.85
336 351 4.201666 GCTTCAACTATGCTTCTCGAACAG 60.202 45.833 0.00 0.00 0.00 3.16
344 359 4.536364 TGCTTCTCGAACAGTGAAAAAG 57.464 40.909 0.00 0.00 32.70 2.27
345 360 3.938963 TGCTTCTCGAACAGTGAAAAAGT 59.061 39.130 0.00 0.00 32.70 2.66
357 372 6.321717 ACAGTGAAAAAGTACATGTGTGTTG 58.678 36.000 9.11 0.00 39.77 3.33
359 374 4.502645 GTGAAAAAGTACATGTGTGTTGCC 59.497 41.667 9.11 0.00 39.77 4.52
507 552 8.471609 TCTGTTTTCCGGTTCTCTTTTATTTTT 58.528 29.630 0.00 0.00 0.00 1.94
559 604 5.721232 TGAGATTTAGTTTCGAAGACCTCC 58.279 41.667 0.00 0.00 34.32 4.30
562 607 0.169672 TAGTTTCGAAGACCTCCGCG 59.830 55.000 0.00 0.00 34.32 6.46
654 699 7.219322 AGAATGAAAATAAAAAGCACAGCCTT 58.781 30.769 0.00 0.00 0.00 4.35
686 731 9.448438 AAAAGAAAATAAAAGCACAAAACCTCT 57.552 25.926 0.00 0.00 0.00 3.69
885 939 3.490890 GGCTCTTGGCGCTAACTG 58.509 61.111 7.64 1.71 42.94 3.16
886 940 2.754995 GGCTCTTGGCGCTAACTGC 61.755 63.158 7.64 12.19 42.94 4.40
896 950 1.670326 CGCTAACTGCAAACCGAAAC 58.330 50.000 0.00 0.00 43.06 2.78
914 968 4.396166 CGAAACATGTTGATTTCTAGGCCT 59.604 41.667 12.82 11.78 33.49 5.19
922 976 7.253905 TGTTGATTTCTAGGCCTAGTTAACT 57.746 36.000 33.84 18.92 34.84 2.24
925 979 7.357429 TGATTTCTAGGCCTAGTTAACTACC 57.643 40.000 33.84 19.32 34.84 3.18
978 1032 1.605710 CCAATCCCACATCGCTTCATC 59.394 52.381 0.00 0.00 0.00 2.92
981 1035 1.194218 TCCCACATCGCTTCATCTCA 58.806 50.000 0.00 0.00 0.00 3.27
988 1042 0.890683 TCGCTTCATCTCACTGCTCA 59.109 50.000 0.00 0.00 0.00 4.26
1016 1070 3.700970 TCCGCACCGCTTCCATCA 61.701 61.111 0.00 0.00 0.00 3.07
1017 1071 2.514592 CCGCACCGCTTCCATCAT 60.515 61.111 0.00 0.00 0.00 2.45
1018 1072 2.537560 CCGCACCGCTTCCATCATC 61.538 63.158 0.00 0.00 0.00 2.92
1019 1073 1.522355 CGCACCGCTTCCATCATCT 60.522 57.895 0.00 0.00 0.00 2.90
1020 1074 1.493950 CGCACCGCTTCCATCATCTC 61.494 60.000 0.00 0.00 0.00 2.75
1021 1075 1.162800 GCACCGCTTCCATCATCTCC 61.163 60.000 0.00 0.00 0.00 3.71
1372 1426 2.510238 AGCGATGACAGCGAAGGC 60.510 61.111 18.71 0.00 40.04 4.35
1413 1467 1.435408 GAAGATGGCAGCGAAGGAGC 61.435 60.000 0.00 0.00 37.41 4.70
1491 1545 1.909700 AAAATCAAGAGGGCGCAGAA 58.090 45.000 10.83 0.00 0.00 3.02
1710 1764 5.682659 AGATGATGAAAGTGATGAAGAGGG 58.317 41.667 0.00 0.00 0.00 4.30
1736 1790 2.657237 CCTCAAAGGCGTCCGACT 59.343 61.111 0.00 0.00 32.88 4.18
1741 1795 1.134367 TCAAAGGCGTCCGACTATCAG 59.866 52.381 0.00 0.00 30.17 2.90
1752 1806 2.544685 CGACTATCAGGTGAAGCTTGG 58.455 52.381 2.10 0.00 0.00 3.61
1798 1852 2.715737 ACACGAAGCTGAGAGAAGAC 57.284 50.000 0.00 0.00 0.00 3.01
1815 1869 2.843701 AGACTTTGCTGTCCTGTCAAG 58.156 47.619 0.00 0.00 37.66 3.02
1885 1939 3.125316 GGTTACTGGCTGATTTGAACGAG 59.875 47.826 0.00 0.00 0.00 4.18
2123 2177 8.972127 TGGTACAAAAGCTGGCAAATATAAATA 58.028 29.630 0.00 0.00 31.92 1.40
2137 2191 9.617975 GCAAATATAAATATTCTGAGCCAAGAC 57.382 33.333 0.00 0.00 32.08 3.01
2163 2217 4.458989 GGACACTGAAGACCATTTTATGCA 59.541 41.667 0.00 0.00 0.00 3.96
2201 2255 2.672961 TGAGGTGAATAAGGCAGTCG 57.327 50.000 0.00 0.00 0.00 4.18
2220 2274 3.218453 TCGCTCTAGAGAATGAGGGAAG 58.782 50.000 24.24 0.00 45.08 3.46
2222 2276 3.634448 CGCTCTAGAGAATGAGGGAAGAA 59.366 47.826 24.24 0.00 43.19 2.52
2251 2305 5.763876 ATTTACTAGCTCTGGACAAGGTT 57.236 39.130 0.00 0.00 0.00 3.50
2401 2464 2.039418 GAGGGGTTGAAGCAAAAAGGT 58.961 47.619 0.00 0.00 0.00 3.50
2412 2475 5.065988 TGAAGCAAAAAGGTCTGTGTAAGTC 59.934 40.000 0.00 0.00 0.00 3.01
2413 2476 4.523083 AGCAAAAAGGTCTGTGTAAGTCA 58.477 39.130 0.00 0.00 0.00 3.41
2438 2501 4.081198 AGCCAAAGTTGTCAAAAACCATGA 60.081 37.500 0.00 0.00 0.00 3.07
2509 2572 6.959361 TGAAGTGCAGAAAAATAGTCAAGTC 58.041 36.000 0.00 0.00 0.00 3.01
2721 2803 7.762159 GGTGAAAAATTCCAAGTTTGTAACTGA 59.238 33.333 0.00 0.00 41.91 3.41
2732 2814 7.217447 CCAAGTTTGTAACTGAAAAACTACACG 59.783 37.037 0.85 0.00 41.93 4.49
2792 2875 7.087409 TCAATGCCATATGTTTCTTACTGTG 57.913 36.000 1.24 0.00 0.00 3.66
2825 2923 4.521146 AGTATTCAGCTGAAACATCCTGG 58.479 43.478 31.55 0.00 37.61 4.45
2919 3017 3.129287 CCTTTTGTTGCCAGTATGCCTAG 59.871 47.826 0.00 0.00 31.97 3.02
2996 3434 5.513094 GCATCCTTATACCCAGCTATGTTGA 60.513 44.000 0.00 0.00 0.00 3.18
2997 3435 5.808366 TCCTTATACCCAGCTATGTTGAG 57.192 43.478 0.00 0.00 0.00 3.02
2998 3436 5.464069 TCCTTATACCCAGCTATGTTGAGA 58.536 41.667 0.00 0.00 0.00 3.27
2999 3437 6.084738 TCCTTATACCCAGCTATGTTGAGAT 58.915 40.000 0.00 0.00 0.00 2.75
3000 3438 7.246027 TCCTTATACCCAGCTATGTTGAGATA 58.754 38.462 0.00 0.00 0.00 1.98
3090 3607 6.772716 TGAGGATTATTAGGTGATTTTGGAGC 59.227 38.462 0.00 0.00 0.00 4.70
3091 3608 6.915786 AGGATTATTAGGTGATTTTGGAGCT 58.084 36.000 0.00 0.00 0.00 4.09
3113 3630 5.049818 GCTCTGCTGTCATGGTTTACATATC 60.050 44.000 0.00 0.00 37.84 1.63
3139 3657 5.691896 TCCTGAGGTTTCTCGATATGTCTA 58.308 41.667 0.00 0.00 42.79 2.59
3161 3679 7.064016 GTCTAGAGTTCAATAGGACTTTGCTTG 59.936 40.741 0.00 0.00 0.00 4.01
3237 3755 6.824553 TGCTAGCTGTGAATATGAGAAGAAT 58.175 36.000 17.23 0.00 0.00 2.40
3238 3756 7.955918 TGCTAGCTGTGAATATGAGAAGAATA 58.044 34.615 17.23 0.00 0.00 1.75
3373 3895 6.573664 TTTGCTTTGATAACATGCACTAGT 57.426 33.333 0.00 0.00 36.31 2.57
3401 3924 4.462508 TGCTGGTCAATTTGTTTTGTCA 57.537 36.364 0.00 0.00 0.00 3.58
3456 3979 9.724839 TGCTTTGTTAGTGTTTGTAATCTTAAC 57.275 29.630 0.00 0.00 0.00 2.01
3572 4098 2.479275 GCAAACCTCGTTACTCTTGTCC 59.521 50.000 0.00 0.00 0.00 4.02
3647 4173 8.579850 TTGCTCATCTACAAAACTAAATCCAT 57.420 30.769 0.00 0.00 0.00 3.41
3648 4174 9.679661 TTGCTCATCTACAAAACTAAATCCATA 57.320 29.630 0.00 0.00 0.00 2.74
3898 4469 0.177604 AGAGAAGCTCAGCCAATCCG 59.822 55.000 0.00 0.00 32.06 4.18
3985 4556 2.047179 AGAGGACCGAAAAGCGCC 60.047 61.111 2.29 0.00 39.11 6.53
4107 4678 2.808543 GACACGCTCCAGAAACAAGAAT 59.191 45.455 0.00 0.00 0.00 2.40
4197 4768 4.803426 AGCGCGAAGAAGCCCTCG 62.803 66.667 12.10 0.00 33.44 4.63
4322 4893 5.388408 TTGTTTGGTTTGGTTTAGTTCGT 57.612 34.783 0.00 0.00 0.00 3.85
4379 4950 7.684062 TGTGTTCGTAGTAGTAAACAGTTTC 57.316 36.000 0.48 0.00 32.66 2.78
4457 5028 1.661341 GTGGTTGCTCTATCTGCCTG 58.339 55.000 0.00 0.00 0.00 4.85
4487 5059 6.440010 TGTTGGATGTGTTTGATGGGAATTAT 59.560 34.615 0.00 0.00 0.00 1.28
4583 5155 2.170397 TGCTCAAAACAGTCAGGACTCA 59.830 45.455 0.00 0.00 40.20 3.41
4584 5156 3.206150 GCTCAAAACAGTCAGGACTCAA 58.794 45.455 0.00 0.00 40.20 3.02
4586 5158 4.997395 GCTCAAAACAGTCAGGACTCAATA 59.003 41.667 0.00 0.00 40.20 1.90
4587 5159 5.645497 GCTCAAAACAGTCAGGACTCAATAT 59.355 40.000 0.00 0.00 40.20 1.28
4588 5160 6.818644 GCTCAAAACAGTCAGGACTCAATATA 59.181 38.462 0.00 0.00 40.20 0.86
4589 5161 7.497249 GCTCAAAACAGTCAGGACTCAATATAT 59.503 37.037 0.00 0.00 40.20 0.86
4590 5162 8.722480 TCAAAACAGTCAGGACTCAATATATG 57.278 34.615 0.00 0.00 40.20 1.78
4591 5163 7.770433 TCAAAACAGTCAGGACTCAATATATGG 59.230 37.037 0.00 0.00 40.20 2.74
4592 5164 7.437713 AAACAGTCAGGACTCAATATATGGA 57.562 36.000 0.00 0.00 40.20 3.41
4624 5197 5.047519 GGGATTCCATATGATTTTGGAGCAG 60.048 44.000 3.65 0.00 42.73 4.24
4644 5217 5.420104 AGCAGTTGGATCCTTAGGAATTTTG 59.580 40.000 14.23 1.09 34.34 2.44
4645 5218 5.418840 GCAGTTGGATCCTTAGGAATTTTGA 59.581 40.000 14.23 0.00 34.34 2.69
4646 5219 6.097412 GCAGTTGGATCCTTAGGAATTTTGAT 59.903 38.462 14.23 0.00 34.34 2.57
4647 5220 7.486647 CAGTTGGATCCTTAGGAATTTTGATG 58.513 38.462 14.23 0.00 34.34 3.07
4672 5259 1.840635 GCTGGACTGGAATCCTTAGGT 59.159 52.381 0.00 0.00 39.75 3.08
4673 5260 3.039011 GCTGGACTGGAATCCTTAGGTA 58.961 50.000 0.00 0.00 39.75 3.08
4674 5261 3.181464 GCTGGACTGGAATCCTTAGGTAC 60.181 52.174 0.00 0.00 39.75 3.34
4675 5262 4.030913 CTGGACTGGAATCCTTAGGTACA 58.969 47.826 0.00 0.91 39.75 2.90
4676 5263 4.431378 TGGACTGGAATCCTTAGGTACAA 58.569 43.478 0.00 0.00 39.75 2.41
4677 5264 4.847512 TGGACTGGAATCCTTAGGTACAAA 59.152 41.667 0.00 0.00 39.75 2.83
4678 5265 5.491078 TGGACTGGAATCCTTAGGTACAAAT 59.509 40.000 0.00 0.00 39.75 2.32
4679 5266 5.823045 GGACTGGAATCCTTAGGTACAAATG 59.177 44.000 0.00 0.00 35.68 2.32
4680 5267 5.193679 ACTGGAATCCTTAGGTACAAATGC 58.806 41.667 0.00 0.00 0.00 3.56
4681 5268 4.532834 TGGAATCCTTAGGTACAAATGCC 58.467 43.478 0.00 0.00 0.00 4.40
4682 5269 3.889538 GGAATCCTTAGGTACAAATGCCC 59.110 47.826 0.00 0.00 0.00 5.36
4683 5270 4.386424 GGAATCCTTAGGTACAAATGCCCT 60.386 45.833 0.00 0.00 0.00 5.19
4684 5271 5.163131 GGAATCCTTAGGTACAAATGCCCTA 60.163 44.000 0.00 0.00 0.00 3.53
4685 5272 5.987019 ATCCTTAGGTACAAATGCCCTAA 57.013 39.130 0.00 10.18 38.25 2.69
4697 5284 2.042831 GCCCTAAGCACTGTGGCTG 61.043 63.158 10.21 0.00 45.07 4.85
4698 5285 1.377725 CCCTAAGCACTGTGGCTGG 60.378 63.158 10.21 5.93 45.07 4.85
4699 5286 1.679311 CCTAAGCACTGTGGCTGGA 59.321 57.895 10.21 0.00 45.07 3.86
4700 5287 0.674895 CCTAAGCACTGTGGCTGGAC 60.675 60.000 10.21 0.00 45.07 4.02
4701 5288 0.674895 CTAAGCACTGTGGCTGGACC 60.675 60.000 10.21 0.00 45.07 4.46
4702 5289 2.449031 TAAGCACTGTGGCTGGACCG 62.449 60.000 10.21 0.00 45.07 4.79
4703 5290 4.314440 GCACTGTGGCTGGACCGA 62.314 66.667 10.21 0.00 43.94 4.69
4704 5291 2.665000 CACTGTGGCTGGACCGAT 59.335 61.111 0.00 0.00 43.94 4.18
4705 5292 1.448540 CACTGTGGCTGGACCGATC 60.449 63.158 0.00 0.00 43.94 3.69
4706 5293 1.913262 ACTGTGGCTGGACCGATCA 60.913 57.895 0.00 0.00 43.94 2.92
4707 5294 1.296392 CTGTGGCTGGACCGATCAA 59.704 57.895 0.00 0.00 43.94 2.57
4708 5295 0.321564 CTGTGGCTGGACCGATCAAA 60.322 55.000 0.00 0.00 43.94 2.69
4709 5296 0.109532 TGTGGCTGGACCGATCAAAA 59.890 50.000 0.00 0.00 43.94 2.44
4710 5297 0.804989 GTGGCTGGACCGATCAAAAG 59.195 55.000 0.00 0.00 43.94 2.27
4711 5298 0.322456 TGGCTGGACCGATCAAAAGG 60.322 55.000 0.00 0.00 43.94 3.11
4712 5299 1.657751 GGCTGGACCGATCAAAAGGC 61.658 60.000 0.00 0.00 0.00 4.35
4713 5300 0.960364 GCTGGACCGATCAAAAGGCA 60.960 55.000 0.00 0.00 0.00 4.75
4714 5301 0.804989 CTGGACCGATCAAAAGGCAC 59.195 55.000 0.00 0.00 0.00 5.01
4716 5303 1.087501 GGACCGATCAAAAGGCACTC 58.912 55.000 0.00 0.00 38.49 3.51
4717 5304 0.721718 GACCGATCAAAAGGCACTCG 59.278 55.000 0.00 0.00 38.49 4.18
4718 5305 0.320374 ACCGATCAAAAGGCACTCGA 59.680 50.000 0.00 0.00 38.49 4.04
4719 5306 1.270625 ACCGATCAAAAGGCACTCGAA 60.271 47.619 0.00 0.00 38.49 3.71
4720 5307 1.394917 CCGATCAAAAGGCACTCGAAG 59.605 52.381 0.00 0.00 38.49 3.79
4721 5308 1.394917 CGATCAAAAGGCACTCGAAGG 59.605 52.381 0.00 0.00 38.49 3.46
4722 5309 1.131315 GATCAAAAGGCACTCGAAGGC 59.869 52.381 3.23 3.23 38.49 4.35
4723 5310 0.108585 TCAAAAGGCACTCGAAGGCT 59.891 50.000 7.66 7.66 44.54 4.58
4724 5311 0.519077 CAAAAGGCACTCGAAGGCTC 59.481 55.000 12.97 2.22 41.47 4.70
4725 5312 0.398318 AAAAGGCACTCGAAGGCTCT 59.602 50.000 12.97 0.00 41.47 4.09
4726 5313 1.267121 AAAGGCACTCGAAGGCTCTA 58.733 50.000 12.97 0.00 41.47 2.43
4727 5314 0.533032 AAGGCACTCGAAGGCTCTAC 59.467 55.000 12.97 0.00 41.47 2.59
4728 5315 0.612174 AGGCACTCGAAGGCTCTACA 60.612 55.000 7.66 0.00 37.29 2.74
4729 5316 0.461961 GGCACTCGAAGGCTCTACAT 59.538 55.000 7.76 0.00 0.00 2.29
4730 5317 1.537135 GGCACTCGAAGGCTCTACATC 60.537 57.143 7.76 0.00 0.00 3.06
4731 5318 1.862008 GCACTCGAAGGCTCTACATCG 60.862 57.143 0.00 0.00 36.67 3.84
4732 5319 1.671328 CACTCGAAGGCTCTACATCGA 59.329 52.381 7.87 7.87 41.53 3.59
4733 5320 2.097629 CACTCGAAGGCTCTACATCGAA 59.902 50.000 9.27 0.00 42.94 3.71
4734 5321 2.097791 ACTCGAAGGCTCTACATCGAAC 59.902 50.000 9.27 0.00 42.94 3.95
4735 5322 1.063616 TCGAAGGCTCTACATCGAACG 59.936 52.381 5.81 0.00 40.92 3.95
4736 5323 1.063616 CGAAGGCTCTACATCGAACGA 59.936 52.381 0.00 0.00 37.48 3.85
4737 5324 2.287069 CGAAGGCTCTACATCGAACGAT 60.287 50.000 3.80 3.80 37.48 3.73
4763 5350 4.659172 CACCGCTTTCCCAGGGCA 62.659 66.667 0.00 0.00 33.95 5.36
4764 5351 4.660938 ACCGCTTTCCCAGGGCAC 62.661 66.667 0.00 0.00 33.95 5.01
4765 5352 4.659172 CCGCTTTCCCAGGGCACA 62.659 66.667 0.00 0.00 33.95 4.57
4766 5353 3.058160 CGCTTTCCCAGGGCACAG 61.058 66.667 0.00 0.00 0.00 3.66
4767 5354 3.376918 GCTTTCCCAGGGCACAGC 61.377 66.667 0.00 3.97 0.00 4.40
4768 5355 2.115910 CTTTCCCAGGGCACAGCA 59.884 61.111 0.00 0.00 0.00 4.41
4769 5356 2.203480 TTTCCCAGGGCACAGCAC 60.203 61.111 0.00 0.00 0.00 4.40
4770 5357 3.808218 TTTCCCAGGGCACAGCACC 62.808 63.158 0.00 0.00 28.43 5.01
4773 5360 4.584518 CCAGGGCACAGCACCACA 62.585 66.667 0.00 0.00 28.43 4.17
4774 5361 3.289834 CAGGGCACAGCACCACAC 61.290 66.667 0.00 0.00 28.43 3.82
4775 5362 4.935495 AGGGCACAGCACCACACG 62.935 66.667 0.00 0.00 28.43 4.49
4777 5364 3.649986 GGCACAGCACCACACGTC 61.650 66.667 0.00 0.00 0.00 4.34
4778 5365 4.000557 GCACAGCACCACACGTCG 62.001 66.667 0.00 0.00 0.00 5.12
4779 5366 2.279186 CACAGCACCACACGTCGA 60.279 61.111 0.00 0.00 0.00 4.20
4780 5367 2.279252 ACAGCACCACACGTCGAC 60.279 61.111 5.18 5.18 0.00 4.20
4781 5368 3.394874 CAGCACCACACGTCGACG 61.395 66.667 34.58 34.58 46.33 5.12
4782 5369 3.588906 AGCACCACACGTCGACGA 61.589 61.111 41.52 0.00 43.02 4.20
4783 5370 2.656007 GCACCACACGTCGACGAA 60.656 61.111 41.52 0.00 43.02 3.85
4784 5371 2.645510 GCACCACACGTCGACGAAG 61.646 63.158 41.52 32.28 43.02 3.79
4785 5372 2.014554 CACCACACGTCGACGAAGG 61.015 63.158 41.52 35.15 43.02 3.46
4786 5373 2.188829 ACCACACGTCGACGAAGGA 61.189 57.895 41.52 0.00 43.02 3.36
4787 5374 1.442184 CCACACGTCGACGAAGGAG 60.442 63.158 41.52 26.00 43.02 3.69
4788 5375 1.442184 CACACGTCGACGAAGGAGG 60.442 63.158 41.52 23.74 43.02 4.30
4789 5376 1.598962 ACACGTCGACGAAGGAGGA 60.599 57.895 41.52 0.00 43.02 3.71
4790 5377 1.154263 CACGTCGACGAAGGAGGAC 60.154 63.158 41.52 0.00 43.02 3.85
4791 5378 2.097918 CGTCGACGAAGGAGGACG 59.902 66.667 33.35 1.15 44.92 4.79
4792 5379 2.202453 GTCGACGAAGGAGGACGC 60.202 66.667 0.00 0.00 0.00 5.19
4793 5380 3.796443 TCGACGAAGGAGGACGCG 61.796 66.667 3.53 3.53 0.00 6.01
4795 5382 4.415332 GACGAAGGAGGACGCGCA 62.415 66.667 5.73 0.00 0.00 6.09
4796 5383 4.421479 ACGAAGGAGGACGCGCAG 62.421 66.667 5.73 2.42 0.00 5.18
4821 5408 3.728076 AAAAAGAAAAGAGGCCCGAAC 57.272 42.857 0.00 0.00 0.00 3.95
4822 5409 2.358322 AAAGAAAAGAGGCCCGAACA 57.642 45.000 0.00 0.00 0.00 3.18
4823 5410 1.605753 AAGAAAAGAGGCCCGAACAC 58.394 50.000 0.00 0.00 0.00 3.32
4824 5411 0.602905 AGAAAAGAGGCCCGAACACG 60.603 55.000 0.00 0.00 0.00 4.49
4825 5412 0.883370 GAAAAGAGGCCCGAACACGT 60.883 55.000 0.00 0.00 0.00 4.49
4826 5413 1.164041 AAAAGAGGCCCGAACACGTG 61.164 55.000 15.48 15.48 0.00 4.49
4827 5414 3.530910 AAGAGGCCCGAACACGTGG 62.531 63.158 21.57 1.92 0.00 4.94
4828 5415 3.998672 GAGGCCCGAACACGTGGA 61.999 66.667 21.57 0.00 0.00 4.02
4829 5416 4.309950 AGGCCCGAACACGTGGAC 62.310 66.667 21.57 12.04 0.00 4.02
4830 5417 4.612412 GGCCCGAACACGTGGACA 62.612 66.667 21.57 0.00 0.00 4.02
4831 5418 3.041940 GCCCGAACACGTGGACAG 61.042 66.667 21.57 7.99 0.00 3.51
4832 5419 3.041940 CCCGAACACGTGGACAGC 61.042 66.667 21.57 3.02 0.00 4.40
4833 5420 3.041940 CCGAACACGTGGACAGCC 61.042 66.667 21.57 1.05 0.00 4.85
4834 5421 2.279851 CGAACACGTGGACAGCCA 60.280 61.111 21.57 0.00 43.47 4.75
4844 5431 2.665649 TGGACAGCCACAGTATAACG 57.334 50.000 0.00 0.00 39.92 3.18
4845 5432 1.287425 GGACAGCCACAGTATAACGC 58.713 55.000 0.00 0.00 0.00 4.84
4846 5433 1.287425 GACAGCCACAGTATAACGCC 58.713 55.000 0.00 0.00 0.00 5.68
4847 5434 0.902531 ACAGCCACAGTATAACGCCT 59.097 50.000 0.00 0.00 0.00 5.52
4848 5435 2.100252 GACAGCCACAGTATAACGCCTA 59.900 50.000 0.00 0.00 0.00 3.93
4849 5436 2.100916 ACAGCCACAGTATAACGCCTAG 59.899 50.000 0.00 0.00 0.00 3.02
4850 5437 2.361119 CAGCCACAGTATAACGCCTAGA 59.639 50.000 0.00 0.00 0.00 2.43
4851 5438 3.028850 AGCCACAGTATAACGCCTAGAA 58.971 45.455 0.00 0.00 0.00 2.10
4852 5439 3.068307 AGCCACAGTATAACGCCTAGAAG 59.932 47.826 0.00 0.00 0.00 2.85
4853 5440 3.067742 GCCACAGTATAACGCCTAGAAGA 59.932 47.826 0.00 0.00 0.00 2.87
4854 5441 4.793353 GCCACAGTATAACGCCTAGAAGAG 60.793 50.000 0.00 0.00 0.00 2.85
4855 5442 4.338682 CCACAGTATAACGCCTAGAAGAGT 59.661 45.833 0.00 0.00 0.00 3.24
4856 5443 5.530171 CCACAGTATAACGCCTAGAAGAGTA 59.470 44.000 0.00 0.00 0.00 2.59
4857 5444 6.039047 CCACAGTATAACGCCTAGAAGAGTAA 59.961 42.308 0.00 0.00 0.00 2.24
4858 5445 7.133513 CACAGTATAACGCCTAGAAGAGTAAG 58.866 42.308 0.00 0.00 0.00 2.34
4859 5446 6.827762 ACAGTATAACGCCTAGAAGAGTAAGT 59.172 38.462 0.00 0.00 0.00 2.24
4860 5447 7.012232 ACAGTATAACGCCTAGAAGAGTAAGTC 59.988 40.741 0.00 0.00 0.00 3.01
4861 5448 7.012138 CAGTATAACGCCTAGAAGAGTAAGTCA 59.988 40.741 0.00 0.00 0.00 3.41
4862 5449 6.770746 ATAACGCCTAGAAGAGTAAGTCAA 57.229 37.500 0.00 0.00 0.00 3.18
4863 5450 4.437772 ACGCCTAGAAGAGTAAGTCAAC 57.562 45.455 0.00 0.00 0.00 3.18
4864 5451 3.119919 ACGCCTAGAAGAGTAAGTCAACG 60.120 47.826 0.00 0.00 0.00 4.10
4865 5452 3.731264 CGCCTAGAAGAGTAAGTCAACGG 60.731 52.174 0.00 0.00 0.00 4.44
4866 5453 3.429135 GCCTAGAAGAGTAAGTCAACGGG 60.429 52.174 0.00 0.00 0.00 5.28
4867 5454 2.745515 AGAAGAGTAAGTCAACGGGC 57.254 50.000 0.00 0.00 0.00 6.13
4868 5455 1.275573 AGAAGAGTAAGTCAACGGGCC 59.724 52.381 0.00 0.00 0.00 5.80
4869 5456 1.001633 GAAGAGTAAGTCAACGGGCCA 59.998 52.381 4.39 0.00 0.00 5.36
4870 5457 0.608640 AGAGTAAGTCAACGGGCCAG 59.391 55.000 4.39 1.85 0.00 4.85
4871 5458 0.391263 GAGTAAGTCAACGGGCCAGG 60.391 60.000 8.08 0.00 0.00 4.45
4872 5459 2.038837 GTAAGTCAACGGGCCAGGC 61.039 63.158 8.08 1.26 0.00 4.85
4873 5460 2.221299 TAAGTCAACGGGCCAGGCT 61.221 57.895 12.43 0.00 0.00 4.58
4874 5461 2.463589 TAAGTCAACGGGCCAGGCTG 62.464 60.000 12.43 7.75 0.00 4.85
4893 5480 2.967076 CCCACGCGCGCTCAATAT 60.967 61.111 32.58 5.07 0.00 1.28
4894 5481 2.534019 CCCACGCGCGCTCAATATT 61.534 57.895 32.58 4.13 0.00 1.28
4895 5482 1.218875 CCCACGCGCGCTCAATATTA 61.219 55.000 32.58 0.00 0.00 0.98
4896 5483 0.790207 CCACGCGCGCTCAATATTAT 59.210 50.000 32.58 2.28 0.00 1.28
4897 5484 1.201812 CCACGCGCGCTCAATATTATC 60.202 52.381 32.58 0.00 0.00 1.75
4898 5485 0.708370 ACGCGCGCTCAATATTATCG 59.292 50.000 32.58 11.18 0.00 2.92
4899 5486 0.581635 CGCGCGCTCAATATTATCGC 60.582 55.000 30.48 14.37 42.05 4.58
4900 5487 0.716108 GCGCGCTCAATATTATCGCT 59.284 50.000 26.67 0.00 43.14 4.93
4901 5488 1.917955 GCGCGCTCAATATTATCGCTA 59.082 47.619 26.67 0.00 43.14 4.26
4902 5489 2.035342 GCGCGCTCAATATTATCGCTAG 60.035 50.000 26.67 10.39 43.14 3.42
4903 5490 2.035342 CGCGCTCAATATTATCGCTAGC 60.035 50.000 19.04 4.06 43.14 3.42
4904 5491 3.182967 GCGCTCAATATTATCGCTAGCT 58.817 45.455 13.93 0.00 42.19 3.32
4905 5492 3.000277 GCGCTCAATATTATCGCTAGCTG 60.000 47.826 13.93 6.69 42.19 4.24
4906 5493 3.000277 CGCTCAATATTATCGCTAGCTGC 60.000 47.826 13.93 0.00 38.57 5.25
4907 5494 3.928992 GCTCAATATTATCGCTAGCTGCA 59.071 43.478 13.93 0.00 43.06 4.41
4908 5495 4.201666 GCTCAATATTATCGCTAGCTGCAC 60.202 45.833 13.93 0.00 43.06 4.57
4909 5496 5.139435 TCAATATTATCGCTAGCTGCACT 57.861 39.130 13.93 0.00 43.06 4.40
4910 5497 6.267496 TCAATATTATCGCTAGCTGCACTA 57.733 37.500 13.93 0.00 43.06 2.74
4911 5498 6.687604 TCAATATTATCGCTAGCTGCACTAA 58.312 36.000 13.93 3.81 43.06 2.24
4912 5499 6.586463 TCAATATTATCGCTAGCTGCACTAAC 59.414 38.462 13.93 0.00 43.06 2.34
4913 5500 3.793797 TTATCGCTAGCTGCACTAACA 57.206 42.857 13.93 0.00 43.06 2.41
4914 5501 2.215907 ATCGCTAGCTGCACTAACAG 57.784 50.000 13.93 0.00 43.06 3.16
4915 5502 1.173913 TCGCTAGCTGCACTAACAGA 58.826 50.000 13.93 0.00 43.06 3.41
4916 5503 1.133216 TCGCTAGCTGCACTAACAGAG 59.867 52.381 13.93 0.00 43.06 3.35
4917 5504 1.135257 CGCTAGCTGCACTAACAGAGT 60.135 52.381 13.93 0.00 43.06 3.24
4918 5505 2.097629 CGCTAGCTGCACTAACAGAGTA 59.902 50.000 13.93 0.00 43.06 2.59
4919 5506 3.701241 GCTAGCTGCACTAACAGAGTAG 58.299 50.000 7.70 0.00 40.25 2.57
4920 5507 3.378742 GCTAGCTGCACTAACAGAGTAGA 59.621 47.826 7.70 0.00 40.25 2.59
4921 5508 4.037446 GCTAGCTGCACTAACAGAGTAGAT 59.963 45.833 7.70 0.00 40.25 1.98
4922 5509 5.239744 GCTAGCTGCACTAACAGAGTAGATA 59.760 44.000 7.70 0.00 40.25 1.98
4923 5510 5.508200 AGCTGCACTAACAGAGTAGATAC 57.492 43.478 1.02 0.00 40.25 2.24
4924 5511 4.035792 AGCTGCACTAACAGAGTAGATACG 59.964 45.833 1.02 0.00 40.25 3.06
4925 5512 4.283678 CTGCACTAACAGAGTAGATACGC 58.716 47.826 0.00 0.00 40.25 4.42
4926 5513 3.692593 TGCACTAACAGAGTAGATACGCA 59.307 43.478 0.00 0.00 35.64 5.24
4927 5514 4.036352 GCACTAACAGAGTAGATACGCAC 58.964 47.826 0.00 0.00 35.64 5.34
4928 5515 4.272480 CACTAACAGAGTAGATACGCACG 58.728 47.826 0.00 0.00 35.64 5.34
4929 5516 3.937706 ACTAACAGAGTAGATACGCACGT 59.062 43.478 0.00 0.00 36.27 4.49
4930 5517 3.844577 AACAGAGTAGATACGCACGTT 57.155 42.857 0.00 0.00 0.00 3.99
4931 5518 3.132629 ACAGAGTAGATACGCACGTTG 57.867 47.619 0.00 0.00 0.00 4.10
4932 5519 2.745821 ACAGAGTAGATACGCACGTTGA 59.254 45.455 0.00 0.00 0.00 3.18
4933 5520 3.181509 ACAGAGTAGATACGCACGTTGAG 60.182 47.826 0.00 0.00 0.00 3.02
4934 5521 3.063588 CAGAGTAGATACGCACGTTGAGA 59.936 47.826 0.00 0.00 0.00 3.27
4935 5522 3.688185 AGAGTAGATACGCACGTTGAGAA 59.312 43.478 0.00 0.00 0.00 2.87
4936 5523 4.155462 AGAGTAGATACGCACGTTGAGAAA 59.845 41.667 0.00 0.00 0.00 2.52
4937 5524 4.801891 AGTAGATACGCACGTTGAGAAAA 58.198 39.130 0.00 0.00 0.00 2.29
4938 5525 5.408356 AGTAGATACGCACGTTGAGAAAAT 58.592 37.500 0.00 0.00 0.00 1.82
4939 5526 5.867716 AGTAGATACGCACGTTGAGAAAATT 59.132 36.000 0.00 0.00 0.00 1.82
4940 5527 5.607119 AGATACGCACGTTGAGAAAATTT 57.393 34.783 0.00 0.00 0.00 1.82
4941 5528 5.997385 AGATACGCACGTTGAGAAAATTTT 58.003 33.333 2.28 2.28 0.00 1.82
4942 5529 6.077838 AGATACGCACGTTGAGAAAATTTTC 58.922 36.000 21.00 21.00 37.45 2.29
4943 5530 4.022464 ACGCACGTTGAGAAAATTTTCA 57.978 36.364 28.00 10.64 39.61 2.69
4944 5531 4.606961 ACGCACGTTGAGAAAATTTTCAT 58.393 34.783 28.00 15.63 39.61 2.57
4945 5532 4.675114 ACGCACGTTGAGAAAATTTTCATC 59.325 37.500 28.00 21.69 39.61 2.92
4946 5533 4.201298 CGCACGTTGAGAAAATTTTCATCG 60.201 41.667 28.00 24.67 40.49 3.84
4947 5534 4.909305 GCACGTTGAGAAAATTTTCATCGA 59.091 37.500 28.00 19.33 38.25 3.59
4948 5535 5.164282 GCACGTTGAGAAAATTTTCATCGAC 60.164 40.000 28.00 25.49 38.25 4.20
4949 5536 5.906838 CACGTTGAGAAAATTTTCATCGACA 59.093 36.000 28.00 17.40 38.25 4.35
4950 5537 6.413526 CACGTTGAGAAAATTTTCATCGACAA 59.586 34.615 28.00 20.86 38.25 3.18
4951 5538 6.413818 ACGTTGAGAAAATTTTCATCGACAAC 59.586 34.615 28.00 26.51 38.25 3.32
4952 5539 6.396454 CGTTGAGAAAATTTTCATCGACAACG 60.396 38.462 32.36 32.36 41.12 4.10
4953 5540 6.055231 TGAGAAAATTTTCATCGACAACGT 57.945 33.333 28.00 7.54 39.61 3.99
4954 5541 7.179927 TGAGAAAATTTTCATCGACAACGTA 57.820 32.000 28.00 6.31 39.61 3.57
4955 5542 7.287950 TGAGAAAATTTTCATCGACAACGTAG 58.712 34.615 28.00 0.00 39.61 3.51
4956 5543 6.599437 AGAAAATTTTCATCGACAACGTAGG 58.401 36.000 28.00 0.00 39.61 3.18
4957 5544 4.939509 AATTTTCATCGACAACGTAGGG 57.060 40.909 0.00 0.00 40.69 3.53
4958 5545 1.717194 TTTCATCGACAACGTAGGGC 58.283 50.000 0.00 0.00 40.69 5.19
4959 5546 0.108520 TTCATCGACAACGTAGGGCC 60.109 55.000 0.00 0.00 40.69 5.80
4960 5547 1.216977 CATCGACAACGTAGGGCCA 59.783 57.895 6.18 0.00 40.69 5.36
4961 5548 1.082117 CATCGACAACGTAGGGCCAC 61.082 60.000 6.18 0.58 40.69 5.01
4962 5549 2.234913 ATCGACAACGTAGGGCCACC 62.235 60.000 6.18 0.00 40.69 4.61
4963 5550 2.745037 GACAACGTAGGGCCACCA 59.255 61.111 6.18 0.00 40.13 4.17
4964 5551 1.375523 GACAACGTAGGGCCACCAG 60.376 63.158 6.18 0.00 40.13 4.00
4965 5552 2.046314 CAACGTAGGGCCACCAGG 60.046 66.667 6.18 0.00 40.13 4.45
4966 5553 2.528378 AACGTAGGGCCACCAGGT 60.528 61.111 6.18 0.00 40.13 4.00
4967 5554 1.229272 AACGTAGGGCCACCAGGTA 60.229 57.895 6.18 0.00 40.13 3.08
4968 5555 0.837260 AACGTAGGGCCACCAGGTAA 60.837 55.000 6.18 0.00 40.13 2.85
4969 5556 0.837260 ACGTAGGGCCACCAGGTAAA 60.837 55.000 6.18 0.00 40.13 2.01
4970 5557 0.544697 CGTAGGGCCACCAGGTAAAT 59.455 55.000 6.18 0.00 40.13 1.40
4971 5558 1.064979 CGTAGGGCCACCAGGTAAATT 60.065 52.381 6.18 0.00 40.13 1.82
4972 5559 2.619590 CGTAGGGCCACCAGGTAAATTT 60.620 50.000 6.18 0.00 40.13 1.82
4973 5560 3.370739 CGTAGGGCCACCAGGTAAATTTA 60.371 47.826 6.18 0.00 40.13 1.40
4974 5561 3.095912 AGGGCCACCAGGTAAATTTAC 57.904 47.619 18.30 18.30 40.13 2.01
4975 5562 2.380590 AGGGCCACCAGGTAAATTTACA 59.619 45.455 25.59 0.00 40.13 2.41
4976 5563 2.494471 GGGCCACCAGGTAAATTTACAC 59.506 50.000 25.59 16.41 37.19 2.90
4977 5564 2.162809 GGCCACCAGGTAAATTTACACG 59.837 50.000 25.59 16.71 37.19 4.49
4978 5565 2.414957 GCCACCAGGTAAATTTACACGC 60.415 50.000 25.59 14.53 37.19 5.34
4979 5566 2.162809 CCACCAGGTAAATTTACACGCC 59.837 50.000 25.59 11.58 35.37 5.68
4980 5567 2.814919 CACCAGGTAAATTTACACGCCA 59.185 45.455 25.59 0.00 35.37 5.69
4981 5568 3.078837 ACCAGGTAAATTTACACGCCAG 58.921 45.455 25.59 12.42 35.37 4.85
4982 5569 3.078837 CCAGGTAAATTTACACGCCAGT 58.921 45.455 25.59 2.81 35.37 4.00
4983 5570 4.255301 CCAGGTAAATTTACACGCCAGTA 58.745 43.478 25.59 0.00 35.37 2.74
4984 5571 4.879545 CCAGGTAAATTTACACGCCAGTAT 59.120 41.667 25.59 1.92 35.37 2.12
4985 5572 5.007332 CCAGGTAAATTTACACGCCAGTATC 59.993 44.000 25.59 7.91 35.37 2.24
4986 5573 5.007332 CAGGTAAATTTACACGCCAGTATCC 59.993 44.000 25.59 7.61 35.37 2.59
4987 5574 4.274214 GGTAAATTTACACGCCAGTATCCC 59.726 45.833 25.59 4.21 35.37 3.85
4988 5575 3.637911 AATTTACACGCCAGTATCCCA 57.362 42.857 0.00 0.00 0.00 4.37
4989 5576 3.637911 ATTTACACGCCAGTATCCCAA 57.362 42.857 0.00 0.00 0.00 4.12
4990 5577 3.420300 TTTACACGCCAGTATCCCAAA 57.580 42.857 0.00 0.00 0.00 3.28
4991 5578 3.637911 TTACACGCCAGTATCCCAAAT 57.362 42.857 0.00 0.00 0.00 2.32
4992 5579 2.507407 ACACGCCAGTATCCCAAATT 57.493 45.000 0.00 0.00 0.00 1.82
4993 5580 3.637911 ACACGCCAGTATCCCAAATTA 57.362 42.857 0.00 0.00 0.00 1.40
4994 5581 3.958018 ACACGCCAGTATCCCAAATTAA 58.042 40.909 0.00 0.00 0.00 1.40
4995 5582 4.532834 ACACGCCAGTATCCCAAATTAAT 58.467 39.130 0.00 0.00 0.00 1.40
4996 5583 5.686753 ACACGCCAGTATCCCAAATTAATA 58.313 37.500 0.00 0.00 0.00 0.98
4997 5584 5.529800 ACACGCCAGTATCCCAAATTAATAC 59.470 40.000 0.00 0.00 0.00 1.89
4998 5585 5.529430 CACGCCAGTATCCCAAATTAATACA 59.471 40.000 0.00 0.00 0.00 2.29
4999 5586 5.529800 ACGCCAGTATCCCAAATTAATACAC 59.470 40.000 0.00 0.00 0.00 2.90
5000 5587 5.333798 CGCCAGTATCCCAAATTAATACACG 60.334 44.000 0.00 0.00 0.00 4.49
5001 5588 5.562113 GCCAGTATCCCAAATTAATACACGC 60.562 44.000 0.00 0.00 0.00 5.34
5002 5589 5.333798 CCAGTATCCCAAATTAATACACGCG 60.334 44.000 3.53 3.53 0.00 6.01
5003 5590 5.235616 CAGTATCCCAAATTAATACACGCGT 59.764 40.000 5.58 5.58 0.00 6.01
5004 5591 4.806342 ATCCCAAATTAATACACGCGTC 57.194 40.909 9.86 0.00 0.00 5.19
5005 5592 3.597255 TCCCAAATTAATACACGCGTCA 58.403 40.909 9.86 0.00 0.00 4.35
5006 5593 3.371591 TCCCAAATTAATACACGCGTCAC 59.628 43.478 9.86 0.00 0.00 3.67
5007 5594 3.486209 CCCAAATTAATACACGCGTCACC 60.486 47.826 9.86 0.00 0.00 4.02
5008 5595 3.125487 CCAAATTAATACACGCGTCACCA 59.875 43.478 9.86 0.00 0.00 4.17
5009 5596 4.378563 CCAAATTAATACACGCGTCACCAA 60.379 41.667 9.86 0.00 0.00 3.67
5010 5597 4.330740 AATTAATACACGCGTCACCAAC 57.669 40.909 9.86 0.00 0.00 3.77
5011 5598 1.712401 TAATACACGCGTCACCAACC 58.288 50.000 9.86 0.00 0.00 3.77
5012 5599 0.249953 AATACACGCGTCACCAACCA 60.250 50.000 9.86 0.00 0.00 3.67
5013 5600 0.249953 ATACACGCGTCACCAACCAA 60.250 50.000 9.86 0.00 0.00 3.67
5014 5601 1.152989 TACACGCGTCACCAACCAAC 61.153 55.000 9.86 0.00 0.00 3.77
5015 5602 2.125065 ACGCGTCACCAACCAACA 60.125 55.556 5.58 0.00 0.00 3.33
5016 5603 1.525077 ACGCGTCACCAACCAACAT 60.525 52.632 5.58 0.00 0.00 2.71
5017 5604 1.082169 CGCGTCACCAACCAACATG 60.082 57.895 0.00 0.00 0.00 3.21
5018 5605 1.371635 GCGTCACCAACCAACATGC 60.372 57.895 0.00 0.00 0.00 4.06
5019 5606 1.795170 GCGTCACCAACCAACATGCT 61.795 55.000 0.00 0.00 0.00 3.79
5020 5607 0.040157 CGTCACCAACCAACATGCTG 60.040 55.000 0.00 0.00 0.00 4.41
5021 5608 1.317613 GTCACCAACCAACATGCTGA 58.682 50.000 0.00 0.00 0.00 4.26
5022 5609 1.267806 GTCACCAACCAACATGCTGAG 59.732 52.381 0.00 0.00 0.00 3.35
5023 5610 1.142667 TCACCAACCAACATGCTGAGA 59.857 47.619 0.00 0.00 0.00 3.27
5024 5611 1.955778 CACCAACCAACATGCTGAGAA 59.044 47.619 0.00 0.00 0.00 2.87
5025 5612 2.030540 CACCAACCAACATGCTGAGAAG 60.031 50.000 0.00 0.00 0.00 2.85
5026 5613 2.233271 CCAACCAACATGCTGAGAAGT 58.767 47.619 0.00 0.00 0.00 3.01
5027 5614 2.624838 CCAACCAACATGCTGAGAAGTT 59.375 45.455 0.00 0.00 0.00 2.66
5028 5615 3.551454 CCAACCAACATGCTGAGAAGTTG 60.551 47.826 0.00 3.69 40.63 3.16
5029 5616 3.213206 ACCAACATGCTGAGAAGTTGA 57.787 42.857 11.77 0.00 42.87 3.18
5030 5617 3.759581 ACCAACATGCTGAGAAGTTGAT 58.240 40.909 11.77 0.00 42.87 2.57
5031 5618 4.147321 ACCAACATGCTGAGAAGTTGATT 58.853 39.130 11.77 0.00 42.87 2.57
5032 5619 4.586001 ACCAACATGCTGAGAAGTTGATTT 59.414 37.500 11.77 0.00 42.87 2.17
5033 5620 5.159209 CCAACATGCTGAGAAGTTGATTTC 58.841 41.667 11.77 0.00 42.87 2.17
5034 5621 5.278610 CCAACATGCTGAGAAGTTGATTTCA 60.279 40.000 11.77 0.00 42.87 2.69
5035 5622 5.368256 ACATGCTGAGAAGTTGATTTCAC 57.632 39.130 0.00 0.00 0.00 3.18
5036 5623 4.217118 ACATGCTGAGAAGTTGATTTCACC 59.783 41.667 0.00 0.00 0.00 4.02
5037 5624 3.149196 TGCTGAGAAGTTGATTTCACCC 58.851 45.455 0.00 0.00 0.00 4.61
5038 5625 3.149196 GCTGAGAAGTTGATTTCACCCA 58.851 45.455 0.00 0.00 0.00 4.51
5039 5626 3.569701 GCTGAGAAGTTGATTTCACCCAA 59.430 43.478 0.00 0.00 0.00 4.12
5040 5627 4.320788 GCTGAGAAGTTGATTTCACCCAAG 60.321 45.833 0.00 0.00 0.00 3.61
5041 5628 4.792068 TGAGAAGTTGATTTCACCCAAGT 58.208 39.130 0.00 0.00 0.00 3.16
5042 5629 4.580167 TGAGAAGTTGATTTCACCCAAGTG 59.420 41.667 0.00 0.00 46.00 3.16
5043 5630 3.891366 AGAAGTTGATTTCACCCAAGTGG 59.109 43.478 0.00 0.00 44.64 4.00
5055 5642 0.872388 CCAAGTGGGTAAACGTGAGC 59.128 55.000 0.00 0.00 32.06 4.26
5056 5643 0.511221 CAAGTGGGTAAACGTGAGCG 59.489 55.000 0.00 0.00 44.93 5.03
5057 5644 1.226030 AAGTGGGTAAACGTGAGCGC 61.226 55.000 0.00 0.00 42.83 5.92
5058 5645 1.957186 GTGGGTAAACGTGAGCGCA 60.957 57.895 11.47 0.00 42.83 6.09
5059 5646 1.227586 TGGGTAAACGTGAGCGCAA 60.228 52.632 11.47 0.00 42.83 4.85
5060 5647 0.814410 TGGGTAAACGTGAGCGCAAA 60.814 50.000 11.47 0.00 42.83 3.68
5061 5648 0.308376 GGGTAAACGTGAGCGCAAAA 59.692 50.000 11.47 0.00 42.83 2.44
5062 5649 1.268640 GGGTAAACGTGAGCGCAAAAA 60.269 47.619 11.47 0.00 42.83 1.94
5063 5650 1.776897 GGTAAACGTGAGCGCAAAAAC 59.223 47.619 11.47 0.38 42.83 2.43
5064 5651 2.442424 GTAAACGTGAGCGCAAAAACA 58.558 42.857 11.47 0.00 42.83 2.83
5065 5652 2.202295 AAACGTGAGCGCAAAAACAT 57.798 40.000 11.47 0.00 42.83 2.71
5066 5653 1.753956 AACGTGAGCGCAAAAACATC 58.246 45.000 11.47 0.00 42.83 3.06
5067 5654 0.040425 ACGTGAGCGCAAAAACATCC 60.040 50.000 11.47 0.00 42.83 3.51
5068 5655 0.729140 CGTGAGCGCAAAAACATCCC 60.729 55.000 11.47 0.00 0.00 3.85
5069 5656 0.388520 GTGAGCGCAAAAACATCCCC 60.389 55.000 11.47 0.00 0.00 4.81
5070 5657 1.154035 GAGCGCAAAAACATCCCCG 60.154 57.895 11.47 0.00 0.00 5.73
5071 5658 2.126110 GCGCAAAAACATCCCCGG 60.126 61.111 0.30 0.00 0.00 5.73
5072 5659 2.631580 GCGCAAAAACATCCCCGGA 61.632 57.895 0.73 0.00 0.00 5.14
5073 5660 1.944234 GCGCAAAAACATCCCCGGAT 61.944 55.000 0.73 0.00 34.81 4.18
5074 5661 1.384525 CGCAAAAACATCCCCGGATA 58.615 50.000 0.73 0.00 32.93 2.59
5075 5662 1.953686 CGCAAAAACATCCCCGGATAT 59.046 47.619 0.73 0.00 32.93 1.63
5076 5663 3.142951 CGCAAAAACATCCCCGGATATA 58.857 45.455 0.73 0.00 32.93 0.86
5077 5664 3.188460 CGCAAAAACATCCCCGGATATAG 59.812 47.826 0.73 0.00 32.93 1.31
5078 5665 3.506067 GCAAAAACATCCCCGGATATAGG 59.494 47.826 0.73 0.00 32.93 2.57
5086 5673 1.497161 CCCGGATATAGGGGCTTAGG 58.503 60.000 0.73 0.00 45.14 2.69
5087 5674 1.273666 CCCGGATATAGGGGCTTAGGT 60.274 57.143 0.73 0.00 45.14 3.08
5088 5675 2.023695 CCCGGATATAGGGGCTTAGGTA 60.024 54.545 0.73 0.00 45.14 3.08
5109 5696 8.496707 AGGTATTTTTCATGGAATTCATTTGC 57.503 30.769 7.93 0.00 32.92 3.68
5123 5710 9.206870 GGAATTCATTTGCACTCTATTTTGAAA 57.793 29.630 7.93 0.00 0.00 2.69
5148 5735 8.712228 AGAAAATTTCTATCCACTCAAACCTT 57.288 30.769 6.43 0.00 38.49 3.50
5152 5739 8.477419 AATTTCTATCCACTCAAACCTTTTGA 57.523 30.769 1.60 1.60 0.00 2.69
5192 5782 9.531942 TTTTTCTTGTACTATCAAACACTCGTA 57.468 29.630 0.00 0.00 0.00 3.43
5208 5798 4.049186 ACTCGTACATTCATGTATTCGCC 58.951 43.478 3.00 0.00 44.25 5.54
5223 5813 5.750067 TGTATTCGCCGGAGTAGTAAATTTC 59.250 40.000 5.05 0.00 0.00 2.17
5224 5814 3.872511 TCGCCGGAGTAGTAAATTTCA 57.127 42.857 5.05 0.00 0.00 2.69
5331 6130 6.540914 ACGTAAGACAGAAAACCTGAAATCAA 59.459 34.615 0.00 0.00 43.17 2.57
5333 6132 6.773976 AAGACAGAAAACCTGAAATCAACA 57.226 33.333 0.00 0.00 45.78 3.33
5337 6136 6.877236 ACAGAAAACCTGAAATCAACATTGT 58.123 32.000 0.00 0.00 45.78 2.71
5357 6156 1.699083 TCACTCAAGACTGCCATGGAA 59.301 47.619 18.40 3.09 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 152 5.466058 TCATACTTTCGCGGTTTTCTGTTTA 59.534 36.000 6.13 0.00 0.00 2.01
322 337 4.576463 ACTTTTTCACTGTTCGAGAAGCAT 59.424 37.500 0.00 0.00 0.00 3.79
324 339 4.537936 ACTTTTTCACTGTTCGAGAAGC 57.462 40.909 0.00 0.00 0.00 3.86
325 340 6.583912 TGTACTTTTTCACTGTTCGAGAAG 57.416 37.500 0.00 0.00 0.00 2.85
329 344 5.583061 ACACATGTACTTTTTCACTGTTCGA 59.417 36.000 0.00 0.00 0.00 3.71
336 351 4.502645 GGCAACACACATGTACTTTTTCAC 59.497 41.667 0.00 0.00 38.45 3.18
559 604 0.865111 TCACCATTGTGTTTCTCGCG 59.135 50.000 0.00 0.00 43.26 5.87
562 607 7.515059 CGAACAATTTTCACCATTGTGTTTCTC 60.515 37.037 0.00 0.00 42.80 2.87
664 709 7.867909 AGCTAGAGGTTTTGTGCTTTTATTTTC 59.132 33.333 0.00 0.00 0.00 2.29
686 731 3.441922 TGTGTGAAACTTGTTGCAAGCTA 59.558 39.130 0.00 0.00 38.04 3.32
772 817 4.651778 TCCGAAATCAGAAATCACTGGTT 58.348 39.130 0.00 0.00 42.11 3.67
775 820 5.871524 TCTCTTCCGAAATCAGAAATCACTG 59.128 40.000 0.00 0.00 39.02 3.66
803 848 1.386533 CATTTGGCAGGCTGTCTAGG 58.613 55.000 21.22 6.37 0.00 3.02
828 873 6.182507 ACGGCCTGGAGTAATCATTATTTA 57.817 37.500 0.00 0.00 0.00 1.40
884 938 3.724508 ATCAACATGTTTCGGTTTGCA 57.275 38.095 8.77 0.00 0.00 4.08
885 939 4.744631 AGAAATCAACATGTTTCGGTTTGC 59.255 37.500 8.77 0.00 38.89 3.68
886 940 6.582295 CCTAGAAATCAACATGTTTCGGTTTG 59.418 38.462 8.77 0.00 38.89 2.93
896 950 7.770897 AGTTAACTAGGCCTAGAAATCAACATG 59.229 37.037 40.40 15.25 36.97 3.21
914 968 2.762327 CTGGGCCTTCGGTAGTTAACTA 59.238 50.000 11.38 11.38 0.00 2.24
978 1032 0.668401 TGTGCGATGTGAGCAGTGAG 60.668 55.000 0.00 0.00 46.10 3.51
981 1035 0.668706 GACTGTGCGATGTGAGCAGT 60.669 55.000 0.00 0.00 46.10 4.40
988 1042 2.738521 GTGCGGACTGTGCGATGT 60.739 61.111 25.77 0.00 30.86 3.06
1016 1070 0.043940 AGCTGTGGAAGGAGGGAGAT 59.956 55.000 0.00 0.00 0.00 2.75
1017 1071 0.710588 TAGCTGTGGAAGGAGGGAGA 59.289 55.000 0.00 0.00 0.00 3.71
1018 1072 1.573108 TTAGCTGTGGAAGGAGGGAG 58.427 55.000 0.00 0.00 0.00 4.30
1019 1073 2.038863 TTTAGCTGTGGAAGGAGGGA 57.961 50.000 0.00 0.00 0.00 4.20
1020 1074 2.437413 GTTTTAGCTGTGGAAGGAGGG 58.563 52.381 0.00 0.00 0.00 4.30
1021 1075 2.437413 GGTTTTAGCTGTGGAAGGAGG 58.563 52.381 0.00 0.00 0.00 4.30
1310 1364 0.752658 TCGTAGATGGGCATCACCAG 59.247 55.000 0.00 0.00 45.20 4.00
1351 1405 1.199229 CTTCGCTGTCATCGCTCTCG 61.199 60.000 0.00 0.00 0.00 4.04
1387 1441 1.061570 GCTGCCATCTTCGCTTTCG 59.938 57.895 0.00 0.00 0.00 3.46
1736 1790 3.519107 TCATCACCAAGCTTCACCTGATA 59.481 43.478 0.00 0.00 0.00 2.15
1741 1795 1.457346 CCTCATCACCAAGCTTCACC 58.543 55.000 0.00 0.00 0.00 4.02
1752 1806 0.842635 AAGAGGGGATGCCTCATCAC 59.157 55.000 2.19 4.97 42.96 3.06
1792 1846 2.435805 TGACAGGACAGCAAAGTCTTCT 59.564 45.455 4.36 0.00 38.57 2.85
1798 1852 2.805099 GTCTCTTGACAGGACAGCAAAG 59.195 50.000 0.00 0.00 42.48 2.77
1815 1869 4.336993 ACACTACATCCATCTTCTCGTCTC 59.663 45.833 0.00 0.00 0.00 3.36
1885 1939 1.318158 CCTTCAGCTGTTCATGGGCC 61.318 60.000 14.67 0.00 0.00 5.80
2123 2177 0.909610 TCCCCGTCTTGGCTCAGAAT 60.910 55.000 0.00 0.00 35.87 2.40
2127 2181 2.525629 TGTCCCCGTCTTGGCTCA 60.526 61.111 0.00 0.00 35.87 4.26
2130 2184 2.358737 CAGTGTCCCCGTCTTGGC 60.359 66.667 0.00 0.00 35.87 4.52
2137 2191 0.324943 AATGGTCTTCAGTGTCCCCG 59.675 55.000 0.00 0.00 0.00 5.73
2163 2217 2.440627 TCATCAAGGGTGCTGCTATCAT 59.559 45.455 0.00 0.00 0.00 2.45
2201 2255 4.649218 AGTTCTTCCCTCATTCTCTAGAGC 59.351 45.833 15.35 0.00 0.00 4.09
2220 2274 4.268884 CCAGAGCTAGTAAATTGCGAGTTC 59.731 45.833 0.00 0.86 34.56 3.01
2222 2276 3.447586 TCCAGAGCTAGTAAATTGCGAGT 59.552 43.478 0.00 0.00 34.56 4.18
2401 2464 4.523083 ACTTTGGCTTTGACTTACACAGA 58.477 39.130 0.00 0.00 0.00 3.41
2412 2475 4.453819 TGGTTTTTGACAACTTTGGCTTTG 59.546 37.500 0.00 0.00 37.03 2.77
2413 2476 4.646572 TGGTTTTTGACAACTTTGGCTTT 58.353 34.783 0.00 0.00 37.03 3.51
2438 2501 5.243060 GCAGGTTTTTCCTACTATTGGTTGT 59.757 40.000 0.00 0.00 46.24 3.32
2509 2572 2.480419 CAGGAGCTTTGTAGGTTTGACG 59.520 50.000 0.00 0.00 30.79 4.35
2792 2875 8.555361 GTTTCAGCTGAATACTATCAAGAATCC 58.445 37.037 28.89 0.00 33.54 3.01
2825 2923 5.668558 ACAGATGTAAACTTGGTCGAAAC 57.331 39.130 0.00 0.00 0.00 2.78
3000 3438 8.815912 TCATGTATAGTATGTGCTGGTTGATAT 58.184 33.333 0.00 0.00 0.00 1.63
3090 3607 5.176406 CGATATGTAAACCATGACAGCAGAG 59.824 44.000 0.00 0.00 34.86 3.35
3091 3608 5.049828 CGATATGTAAACCATGACAGCAGA 58.950 41.667 0.00 0.00 34.86 4.26
3113 3630 4.022762 ACATATCGAGAAACCTCAGGATCG 60.023 45.833 0.00 1.57 0.00 3.69
3139 3657 4.457257 GCAAGCAAAGTCCTATTGAACTCT 59.543 41.667 0.00 0.00 0.00 3.24
3161 3679 5.616488 ATTCCAATTCACTTTTGCAATGC 57.384 34.783 0.00 0.00 0.00 3.56
3237 3755 9.674068 TCATTGCTATGTTACTAACAATGGTTA 57.326 29.630 8.01 0.00 45.86 2.85
3238 3756 8.574251 TCATTGCTATGTTACTAACAATGGTT 57.426 30.769 8.01 0.00 45.86 3.67
3248 3766 7.067859 AGCACAATTCATCATTGCTATGTTACT 59.932 33.333 8.01 0.00 45.74 2.24
3363 3885 3.427098 CCAGCATTGTTGACTAGTGCATG 60.427 47.826 0.00 0.00 38.23 4.06
3373 3895 4.669206 ACAAATTGACCAGCATTGTTGA 57.331 36.364 0.00 0.00 30.50 3.18
3401 3924 3.715495 TCAAGCATGACGCAACATTTTT 58.285 36.364 0.00 0.00 46.13 1.94
3647 4173 5.766150 AGCACAAGCACATGTTAAAAGTA 57.234 34.783 0.00 0.00 45.49 2.24
3648 4174 4.654091 AGCACAAGCACATGTTAAAAGT 57.346 36.364 0.00 0.00 45.49 2.66
3898 4469 1.958205 CATCGCCATCTTCCTCGCC 60.958 63.158 0.00 0.00 0.00 5.54
3985 4556 0.595095 GTGCTCTGTTCTTTGCCCAG 59.405 55.000 0.00 0.00 0.00 4.45
4107 4678 4.617253 TTTCTTCCGTGGATTCTTGAGA 57.383 40.909 0.00 0.00 0.00 3.27
4251 4822 4.269603 CGATGCTATCAACTCTTGAACCTG 59.730 45.833 0.00 0.00 43.95 4.00
4322 4893 1.967066 ACGAAAATTTCATGCCCCACA 59.033 42.857 6.53 0.00 0.00 4.17
4379 4950 2.034558 ACATGCTGTTTTCTTTCCACCG 59.965 45.455 0.00 0.00 0.00 4.94
4457 5028 3.921119 TCAAACACATCCAACATCTGC 57.079 42.857 0.00 0.00 0.00 4.26
4487 5059 7.004555 TGGTAGTTCTTCATCTTTCTGCTTA 57.995 36.000 0.00 0.00 0.00 3.09
4590 5162 7.787623 ATCATATGGAATCCCTTTGAATTCC 57.212 36.000 2.27 7.09 42.07 3.01
4592 5164 9.841295 CAAAATCATATGGAATCCCTTTGAATT 57.159 29.630 2.13 0.00 0.00 2.17
4624 5197 7.645058 TCATCAAAATTCCTAAGGATCCAAC 57.355 36.000 15.82 0.00 0.00 3.77
4644 5217 2.315925 TTCCAGTCCAGCGAATCATC 57.684 50.000 0.00 0.00 0.00 2.92
4645 5218 2.486191 GGATTCCAGTCCAGCGAATCAT 60.486 50.000 10.27 0.00 42.34 2.45
4646 5219 1.134401 GGATTCCAGTCCAGCGAATCA 60.134 52.381 10.27 0.00 42.34 2.57
4647 5220 1.139853 AGGATTCCAGTCCAGCGAATC 59.860 52.381 5.29 0.00 40.90 2.52
4679 5266 2.042831 CAGCCACAGTGCTTAGGGC 61.043 63.158 0.00 0.00 40.32 5.19
4680 5267 1.377725 CCAGCCACAGTGCTTAGGG 60.378 63.158 0.00 0.00 40.32 3.53
4681 5268 0.674895 GTCCAGCCACAGTGCTTAGG 60.675 60.000 0.00 0.00 40.32 2.69
4682 5269 0.674895 GGTCCAGCCACAGTGCTTAG 60.675 60.000 0.00 0.00 40.32 2.18
4683 5270 1.374947 GGTCCAGCCACAGTGCTTA 59.625 57.895 0.00 0.00 40.32 3.09
4684 5271 2.113986 GGTCCAGCCACAGTGCTT 59.886 61.111 0.00 0.00 40.32 3.91
4685 5272 4.320456 CGGTCCAGCCACAGTGCT 62.320 66.667 0.00 0.00 44.00 4.40
4686 5273 3.612247 ATCGGTCCAGCCACAGTGC 62.612 63.158 0.00 0.00 36.97 4.40
4687 5274 1.448540 GATCGGTCCAGCCACAGTG 60.449 63.158 0.00 0.00 36.97 3.66
4688 5275 1.480212 TTGATCGGTCCAGCCACAGT 61.480 55.000 0.00 0.00 36.97 3.55
4689 5276 0.321564 TTTGATCGGTCCAGCCACAG 60.322 55.000 0.00 0.00 36.97 3.66
4690 5277 0.109532 TTTTGATCGGTCCAGCCACA 59.890 50.000 0.00 0.00 36.97 4.17
4691 5278 0.804989 CTTTTGATCGGTCCAGCCAC 59.195 55.000 0.00 0.00 36.97 5.01
4692 5279 0.322456 CCTTTTGATCGGTCCAGCCA 60.322 55.000 0.00 0.00 36.97 4.75
4693 5280 1.657751 GCCTTTTGATCGGTCCAGCC 61.658 60.000 0.00 0.00 0.00 4.85
4694 5281 0.960364 TGCCTTTTGATCGGTCCAGC 60.960 55.000 0.00 0.00 0.00 4.85
4695 5282 0.804989 GTGCCTTTTGATCGGTCCAG 59.195 55.000 0.00 0.00 0.00 3.86
4696 5283 0.400213 AGTGCCTTTTGATCGGTCCA 59.600 50.000 0.00 0.00 0.00 4.02
4697 5284 1.087501 GAGTGCCTTTTGATCGGTCC 58.912 55.000 0.00 0.00 0.00 4.46
4698 5285 0.721718 CGAGTGCCTTTTGATCGGTC 59.278 55.000 0.00 0.00 0.00 4.79
4699 5286 0.320374 TCGAGTGCCTTTTGATCGGT 59.680 50.000 0.00 0.00 34.29 4.69
4700 5287 1.394917 CTTCGAGTGCCTTTTGATCGG 59.605 52.381 0.00 0.00 34.29 4.18
4701 5288 1.394917 CCTTCGAGTGCCTTTTGATCG 59.605 52.381 0.00 0.00 34.80 3.69
4702 5289 1.131315 GCCTTCGAGTGCCTTTTGATC 59.869 52.381 0.00 0.00 0.00 2.92
4703 5290 1.168714 GCCTTCGAGTGCCTTTTGAT 58.831 50.000 0.00 0.00 0.00 2.57
4704 5291 0.108585 AGCCTTCGAGTGCCTTTTGA 59.891 50.000 4.80 0.00 0.00 2.69
4705 5292 0.519077 GAGCCTTCGAGTGCCTTTTG 59.481 55.000 4.80 0.00 0.00 2.44
4706 5293 0.398318 AGAGCCTTCGAGTGCCTTTT 59.602 50.000 4.80 0.00 0.00 2.27
4707 5294 1.066787 GTAGAGCCTTCGAGTGCCTTT 60.067 52.381 4.80 0.00 0.00 3.11
4708 5295 0.533032 GTAGAGCCTTCGAGTGCCTT 59.467 55.000 4.80 0.00 0.00 4.35
4709 5296 0.612174 TGTAGAGCCTTCGAGTGCCT 60.612 55.000 4.80 5.04 0.00 4.75
4710 5297 0.461961 ATGTAGAGCCTTCGAGTGCC 59.538 55.000 4.80 0.00 0.00 5.01
4711 5298 1.846541 GATGTAGAGCCTTCGAGTGC 58.153 55.000 0.34 0.34 0.00 4.40
4712 5299 1.671328 TCGATGTAGAGCCTTCGAGTG 59.329 52.381 0.00 0.00 36.48 3.51
4713 5300 2.039818 TCGATGTAGAGCCTTCGAGT 57.960 50.000 0.00 0.00 36.48 4.18
4714 5301 2.722071 GTTCGATGTAGAGCCTTCGAG 58.278 52.381 0.00 0.00 40.58 4.04
4715 5302 1.063616 CGTTCGATGTAGAGCCTTCGA 59.936 52.381 0.00 0.00 38.68 3.71
4716 5303 1.063616 TCGTTCGATGTAGAGCCTTCG 59.936 52.381 0.00 0.00 34.41 3.79
4717 5304 2.846039 TCGTTCGATGTAGAGCCTTC 57.154 50.000 0.00 0.00 0.00 3.46
4718 5305 2.223829 CCATCGTTCGATGTAGAGCCTT 60.224 50.000 26.03 0.00 40.07 4.35
4719 5306 1.338337 CCATCGTTCGATGTAGAGCCT 59.662 52.381 26.03 0.00 40.07 4.58
4720 5307 1.337071 TCCATCGTTCGATGTAGAGCC 59.663 52.381 26.03 0.00 40.07 4.70
4721 5308 2.776312 TCCATCGTTCGATGTAGAGC 57.224 50.000 26.03 0.00 40.07 4.09
4722 5309 3.046390 GCTTCCATCGTTCGATGTAGAG 58.954 50.000 26.03 21.06 40.07 2.43
4723 5310 2.540973 CGCTTCCATCGTTCGATGTAGA 60.541 50.000 26.03 17.51 40.07 2.59
4724 5311 1.781429 CGCTTCCATCGTTCGATGTAG 59.219 52.381 26.03 22.71 40.07 2.74
4725 5312 1.535226 CCGCTTCCATCGTTCGATGTA 60.535 52.381 26.03 13.72 40.07 2.29
4726 5313 0.806102 CCGCTTCCATCGTTCGATGT 60.806 55.000 26.03 0.00 40.07 3.06
4727 5314 1.927210 CCGCTTCCATCGTTCGATG 59.073 57.895 22.95 22.95 41.03 3.84
4728 5315 1.883084 GCCGCTTCCATCGTTCGAT 60.883 57.895 1.68 1.68 0.00 3.59
4729 5316 2.508439 GCCGCTTCCATCGTTCGA 60.508 61.111 0.00 0.00 0.00 3.71
4730 5317 2.813474 TGCCGCTTCCATCGTTCG 60.813 61.111 0.00 0.00 0.00 3.95
4731 5318 2.750888 GGTGCCGCTTCCATCGTTC 61.751 63.158 0.00 0.00 0.00 3.95
4732 5319 2.746277 GGTGCCGCTTCCATCGTT 60.746 61.111 0.00 0.00 0.00 3.85
4746 5333 4.659172 TGCCCTGGGAAAGCGGTG 62.659 66.667 19.27 0.00 0.00 4.94
4747 5334 4.660938 GTGCCCTGGGAAAGCGGT 62.661 66.667 19.27 0.00 0.00 5.68
4748 5335 4.659172 TGTGCCCTGGGAAAGCGG 62.659 66.667 19.27 0.00 0.00 5.52
4749 5336 3.058160 CTGTGCCCTGGGAAAGCG 61.058 66.667 19.27 0.00 0.00 4.68
4750 5337 3.376918 GCTGTGCCCTGGGAAAGC 61.377 66.667 19.27 17.21 39.51 3.51
4751 5338 2.115910 TGCTGTGCCCTGGGAAAG 59.884 61.111 19.27 11.05 0.00 2.62
4752 5339 2.203480 GTGCTGTGCCCTGGGAAA 60.203 61.111 19.27 0.00 0.00 3.13
4753 5340 4.284550 GGTGCTGTGCCCTGGGAA 62.285 66.667 19.27 1.51 0.00 3.97
4756 5343 4.584518 TGTGGTGCTGTGCCCTGG 62.585 66.667 0.00 0.00 0.00 4.45
4757 5344 3.289834 GTGTGGTGCTGTGCCCTG 61.290 66.667 0.00 0.00 0.00 4.45
4758 5345 4.935495 CGTGTGGTGCTGTGCCCT 62.935 66.667 0.00 0.00 0.00 5.19
4760 5347 3.649986 GACGTGTGGTGCTGTGCC 61.650 66.667 0.00 0.00 0.00 5.01
4761 5348 4.000557 CGACGTGTGGTGCTGTGC 62.001 66.667 0.00 0.00 0.00 4.57
4762 5349 2.279186 TCGACGTGTGGTGCTGTG 60.279 61.111 0.00 0.00 0.00 3.66
4763 5350 2.279252 GTCGACGTGTGGTGCTGT 60.279 61.111 0.00 0.00 0.00 4.40
4764 5351 3.394874 CGTCGACGTGTGGTGCTG 61.395 66.667 29.08 0.00 34.11 4.41
4765 5352 3.128632 TTCGTCGACGTGTGGTGCT 62.129 57.895 34.40 0.00 40.80 4.40
4766 5353 2.645510 CTTCGTCGACGTGTGGTGC 61.646 63.158 34.40 0.00 40.80 5.01
4767 5354 2.014554 CCTTCGTCGACGTGTGGTG 61.015 63.158 34.40 18.81 40.80 4.17
4768 5355 2.126417 CTCCTTCGTCGACGTGTGGT 62.126 60.000 34.40 0.00 40.80 4.16
4769 5356 1.442184 CTCCTTCGTCGACGTGTGG 60.442 63.158 34.40 30.16 40.80 4.17
4770 5357 1.442184 CCTCCTTCGTCGACGTGTG 60.442 63.158 34.40 24.03 40.80 3.82
4771 5358 1.598962 TCCTCCTTCGTCGACGTGT 60.599 57.895 34.40 0.00 40.80 4.49
4772 5359 1.154263 GTCCTCCTTCGTCGACGTG 60.154 63.158 34.40 26.56 40.80 4.49
4773 5360 2.675056 CGTCCTCCTTCGTCGACGT 61.675 63.158 34.40 0.00 42.31 4.34
4774 5361 2.097918 CGTCCTCCTTCGTCGACG 59.902 66.667 31.30 31.30 41.70 5.12
4775 5362 2.202453 GCGTCCTCCTTCGTCGAC 60.202 66.667 5.18 5.18 0.00 4.20
4776 5363 3.796443 CGCGTCCTCCTTCGTCGA 61.796 66.667 0.00 0.00 0.00 4.20
4778 5365 4.415332 TGCGCGTCCTCCTTCGTC 62.415 66.667 8.43 0.00 0.00 4.20
4779 5366 4.421479 CTGCGCGTCCTCCTTCGT 62.421 66.667 8.43 0.00 0.00 3.85
4786 5373 4.947147 TTTTGGGCTGCGCGTCCT 62.947 61.111 20.40 0.00 0.00 3.85
4787 5374 3.972276 TTTTTGGGCTGCGCGTCC 61.972 61.111 14.61 14.61 0.00 4.79
4801 5388 3.028130 TGTTCGGGCCTCTTTTCTTTTT 58.972 40.909 0.84 0.00 0.00 1.94
4802 5389 2.361119 GTGTTCGGGCCTCTTTTCTTTT 59.639 45.455 0.84 0.00 0.00 2.27
4803 5390 1.954382 GTGTTCGGGCCTCTTTTCTTT 59.046 47.619 0.84 0.00 0.00 2.52
4804 5391 1.605753 GTGTTCGGGCCTCTTTTCTT 58.394 50.000 0.84 0.00 0.00 2.52
4805 5392 0.602905 CGTGTTCGGGCCTCTTTTCT 60.603 55.000 0.84 0.00 0.00 2.52
4806 5393 0.883370 ACGTGTTCGGGCCTCTTTTC 60.883 55.000 0.84 0.00 41.85 2.29
4807 5394 1.147600 ACGTGTTCGGGCCTCTTTT 59.852 52.632 0.84 0.00 41.85 2.27
4808 5395 1.597027 CACGTGTTCGGGCCTCTTT 60.597 57.895 7.58 0.00 41.85 2.52
4809 5396 2.030562 CACGTGTTCGGGCCTCTT 59.969 61.111 7.58 0.00 41.85 2.85
4810 5397 4.003788 CCACGTGTTCGGGCCTCT 62.004 66.667 15.65 0.00 39.39 3.69
4811 5398 3.998672 TCCACGTGTTCGGGCCTC 61.999 66.667 15.65 0.00 39.39 4.70
4812 5399 4.309950 GTCCACGTGTTCGGGCCT 62.310 66.667 15.65 0.00 39.39 5.19
4813 5400 4.612412 TGTCCACGTGTTCGGGCC 62.612 66.667 15.65 0.00 39.39 5.80
4814 5401 3.041940 CTGTCCACGTGTTCGGGC 61.042 66.667 15.65 0.24 39.39 6.13
4815 5402 3.041940 GCTGTCCACGTGTTCGGG 61.042 66.667 15.65 0.00 41.85 5.14
4816 5403 3.041940 GGCTGTCCACGTGTTCGG 61.042 66.667 15.65 12.54 41.85 4.30
4817 5404 2.279851 TGGCTGTCCACGTGTTCG 60.280 61.111 15.65 0.00 37.47 3.95
4825 5412 1.404986 GCGTTATACTGTGGCTGTCCA 60.405 52.381 0.00 0.00 40.85 4.02
4826 5413 1.287425 GCGTTATACTGTGGCTGTCC 58.713 55.000 0.00 0.00 0.00 4.02
4827 5414 1.134788 AGGCGTTATACTGTGGCTGTC 60.135 52.381 0.00 0.00 35.74 3.51
4828 5415 0.902531 AGGCGTTATACTGTGGCTGT 59.097 50.000 0.00 0.00 35.74 4.40
4829 5416 2.361119 TCTAGGCGTTATACTGTGGCTG 59.639 50.000 2.07 0.00 37.81 4.85
4830 5417 2.662866 TCTAGGCGTTATACTGTGGCT 58.337 47.619 0.00 0.00 40.61 4.75
4831 5418 3.067742 TCTTCTAGGCGTTATACTGTGGC 59.932 47.826 0.00 0.00 0.00 5.01
4832 5419 4.338682 ACTCTTCTAGGCGTTATACTGTGG 59.661 45.833 0.00 0.00 0.00 4.17
4833 5420 5.502153 ACTCTTCTAGGCGTTATACTGTG 57.498 43.478 0.00 0.00 0.00 3.66
4834 5421 6.827762 ACTTACTCTTCTAGGCGTTATACTGT 59.172 38.462 0.00 0.00 0.00 3.55
4835 5422 7.012138 TGACTTACTCTTCTAGGCGTTATACTG 59.988 40.741 0.00 0.00 0.00 2.74
4836 5423 7.052873 TGACTTACTCTTCTAGGCGTTATACT 58.947 38.462 0.00 0.00 0.00 2.12
4837 5424 7.256756 TGACTTACTCTTCTAGGCGTTATAC 57.743 40.000 0.00 0.00 0.00 1.47
4838 5425 7.466455 CGTTGACTTACTCTTCTAGGCGTTATA 60.466 40.741 0.00 0.00 0.00 0.98
4839 5426 6.562518 GTTGACTTACTCTTCTAGGCGTTAT 58.437 40.000 0.00 0.00 0.00 1.89
4840 5427 5.391310 CGTTGACTTACTCTTCTAGGCGTTA 60.391 44.000 0.00 0.00 0.00 3.18
4841 5428 4.615452 CGTTGACTTACTCTTCTAGGCGTT 60.615 45.833 0.00 0.00 0.00 4.84
4842 5429 3.119919 CGTTGACTTACTCTTCTAGGCGT 60.120 47.826 0.00 0.00 0.00 5.68
4843 5430 3.427243 CGTTGACTTACTCTTCTAGGCG 58.573 50.000 0.00 0.00 0.00 5.52
4844 5431 3.429135 CCCGTTGACTTACTCTTCTAGGC 60.429 52.174 0.00 0.00 0.00 3.93
4845 5432 3.429135 GCCCGTTGACTTACTCTTCTAGG 60.429 52.174 0.00 0.00 0.00 3.02
4846 5433 3.429135 GGCCCGTTGACTTACTCTTCTAG 60.429 52.174 0.00 0.00 0.00 2.43
4847 5434 2.494870 GGCCCGTTGACTTACTCTTCTA 59.505 50.000 0.00 0.00 0.00 2.10
4848 5435 1.275573 GGCCCGTTGACTTACTCTTCT 59.724 52.381 0.00 0.00 0.00 2.85
4849 5436 1.001633 TGGCCCGTTGACTTACTCTTC 59.998 52.381 0.00 0.00 0.00 2.87
4850 5437 1.002087 CTGGCCCGTTGACTTACTCTT 59.998 52.381 0.00 0.00 0.00 2.85
4851 5438 0.608640 CTGGCCCGTTGACTTACTCT 59.391 55.000 0.00 0.00 0.00 3.24
4852 5439 0.391263 CCTGGCCCGTTGACTTACTC 60.391 60.000 0.00 0.00 0.00 2.59
4853 5440 1.677552 CCTGGCCCGTTGACTTACT 59.322 57.895 0.00 0.00 0.00 2.24
4854 5441 2.038837 GCCTGGCCCGTTGACTTAC 61.039 63.158 7.66 0.00 0.00 2.34
4855 5442 2.221299 AGCCTGGCCCGTTGACTTA 61.221 57.895 16.57 0.00 0.00 2.24
4856 5443 3.570212 AGCCTGGCCCGTTGACTT 61.570 61.111 16.57 0.00 0.00 3.01
4857 5444 4.335647 CAGCCTGGCCCGTTGACT 62.336 66.667 16.57 0.00 0.00 3.41
4876 5463 1.218875 TAATATTGAGCGCGCGTGGG 61.219 55.000 32.35 8.91 0.00 4.61
4877 5464 0.790207 ATAATATTGAGCGCGCGTGG 59.210 50.000 32.35 8.46 0.00 4.94
4878 5465 1.523009 CGATAATATTGAGCGCGCGTG 60.523 52.381 32.35 16.86 0.00 5.34
4879 5466 0.708370 CGATAATATTGAGCGCGCGT 59.292 50.000 32.35 18.26 0.00 6.01
4880 5467 0.581635 GCGATAATATTGAGCGCGCG 60.582 55.000 28.44 28.44 38.24 6.86
4881 5468 3.189542 GCGATAATATTGAGCGCGC 57.810 52.632 26.66 26.66 38.24 6.86
4884 5471 3.000277 GCAGCTAGCGATAATATTGAGCG 60.000 47.826 9.55 0.41 33.69 5.03
4885 5472 4.513000 GCAGCTAGCGATAATATTGAGC 57.487 45.455 9.55 1.05 0.00 4.26
4898 5485 2.663826 ACTCTGTTAGTGCAGCTAGC 57.336 50.000 6.62 6.62 45.96 3.42
4899 5486 5.766150 ATCTACTCTGTTAGTGCAGCTAG 57.234 43.478 0.00 0.00 39.39 3.42
4900 5487 5.236695 CGTATCTACTCTGTTAGTGCAGCTA 59.763 44.000 0.00 0.00 39.39 3.32
4901 5488 4.035792 CGTATCTACTCTGTTAGTGCAGCT 59.964 45.833 0.00 0.00 39.39 4.24
4902 5489 4.283678 CGTATCTACTCTGTTAGTGCAGC 58.716 47.826 0.00 0.00 39.39 5.25
4903 5490 4.201920 TGCGTATCTACTCTGTTAGTGCAG 60.202 45.833 0.00 0.00 39.39 4.41
4904 5491 3.692593 TGCGTATCTACTCTGTTAGTGCA 59.307 43.478 0.00 0.00 39.39 4.57
4905 5492 4.036352 GTGCGTATCTACTCTGTTAGTGC 58.964 47.826 0.00 0.00 39.39 4.40
4906 5493 4.201792 ACGTGCGTATCTACTCTGTTAGTG 60.202 45.833 0.00 0.00 39.39 2.74
4907 5494 3.937706 ACGTGCGTATCTACTCTGTTAGT 59.062 43.478 0.00 0.00 42.62 2.24
4908 5495 4.533225 ACGTGCGTATCTACTCTGTTAG 57.467 45.455 0.00 0.00 0.00 2.34
4909 5496 4.392754 TCAACGTGCGTATCTACTCTGTTA 59.607 41.667 0.00 0.00 0.00 2.41
4910 5497 3.189910 TCAACGTGCGTATCTACTCTGTT 59.810 43.478 0.00 0.00 0.00 3.16
4911 5498 2.745821 TCAACGTGCGTATCTACTCTGT 59.254 45.455 0.00 0.00 0.00 3.41
4912 5499 3.063588 TCTCAACGTGCGTATCTACTCTG 59.936 47.826 0.00 0.00 0.00 3.35
4913 5500 3.268330 TCTCAACGTGCGTATCTACTCT 58.732 45.455 0.00 0.00 0.00 3.24
4914 5501 3.670311 TCTCAACGTGCGTATCTACTC 57.330 47.619 0.00 0.00 0.00 2.59
4915 5502 4.430137 TTTCTCAACGTGCGTATCTACT 57.570 40.909 0.00 0.00 0.00 2.57
4916 5503 5.697848 ATTTTCTCAACGTGCGTATCTAC 57.302 39.130 0.00 0.00 0.00 2.59
4917 5504 6.715344 AAATTTTCTCAACGTGCGTATCTA 57.285 33.333 0.00 0.00 0.00 1.98
4918 5505 5.607119 AAATTTTCTCAACGTGCGTATCT 57.393 34.783 0.00 0.00 0.00 1.98
4919 5506 5.849081 TGAAAATTTTCTCAACGTGCGTATC 59.151 36.000 26.73 1.18 38.02 2.24
4920 5507 5.753744 TGAAAATTTTCTCAACGTGCGTAT 58.246 33.333 26.73 0.00 38.02 3.06
4921 5508 5.158101 TGAAAATTTTCTCAACGTGCGTA 57.842 34.783 26.73 4.19 38.02 4.42
4922 5509 4.022464 TGAAAATTTTCTCAACGTGCGT 57.978 36.364 26.73 0.00 38.02 5.24
4923 5510 4.201298 CGATGAAAATTTTCTCAACGTGCG 60.201 41.667 26.73 15.70 38.02 5.34
4924 5511 4.909305 TCGATGAAAATTTTCTCAACGTGC 59.091 37.500 26.73 9.80 38.02 5.34
4925 5512 5.906838 TGTCGATGAAAATTTTCTCAACGTG 59.093 36.000 26.73 12.58 38.02 4.49
4926 5513 6.055231 TGTCGATGAAAATTTTCTCAACGT 57.945 33.333 26.73 6.72 38.02 3.99
4927 5514 6.396454 CGTTGTCGATGAAAATTTTCTCAACG 60.396 38.462 31.29 31.29 39.60 4.10
4928 5515 6.413818 ACGTTGTCGATGAAAATTTTCTCAAC 59.586 34.615 26.73 25.40 40.62 3.18
4929 5516 6.491394 ACGTTGTCGATGAAAATTTTCTCAA 58.509 32.000 26.73 19.73 40.62 3.02
4930 5517 6.055231 ACGTTGTCGATGAAAATTTTCTCA 57.945 33.333 26.73 12.81 40.62 3.27
4931 5518 6.736853 CCTACGTTGTCGATGAAAATTTTCTC 59.263 38.462 26.73 20.19 40.62 2.87
4932 5519 6.348213 CCCTACGTTGTCGATGAAAATTTTCT 60.348 38.462 26.73 15.09 40.62 2.52
4933 5520 5.793457 CCCTACGTTGTCGATGAAAATTTTC 59.207 40.000 21.60 21.60 40.62 2.29
4934 5521 5.695818 CCCTACGTTGTCGATGAAAATTTT 58.304 37.500 2.28 2.28 40.62 1.82
4935 5522 4.379082 GCCCTACGTTGTCGATGAAAATTT 60.379 41.667 0.00 0.00 40.62 1.82
4936 5523 3.126343 GCCCTACGTTGTCGATGAAAATT 59.874 43.478 0.00 0.00 40.62 1.82
4937 5524 2.676342 GCCCTACGTTGTCGATGAAAAT 59.324 45.455 0.00 0.00 40.62 1.82
4938 5525 2.070783 GCCCTACGTTGTCGATGAAAA 58.929 47.619 0.00 0.00 40.62 2.29
4939 5526 1.673626 GGCCCTACGTTGTCGATGAAA 60.674 52.381 0.00 0.00 40.62 2.69
4940 5527 0.108520 GGCCCTACGTTGTCGATGAA 60.109 55.000 0.00 0.00 40.62 2.57
4941 5528 1.252215 TGGCCCTACGTTGTCGATGA 61.252 55.000 0.00 0.00 40.62 2.92
4942 5529 1.082117 GTGGCCCTACGTTGTCGATG 61.082 60.000 0.00 0.00 40.62 3.84
4943 5530 1.217244 GTGGCCCTACGTTGTCGAT 59.783 57.895 0.00 0.00 40.62 3.59
4944 5531 2.652530 GTGGCCCTACGTTGTCGA 59.347 61.111 0.00 0.00 40.62 4.20
4945 5532 2.433664 GGTGGCCCTACGTTGTCG 60.434 66.667 0.00 0.00 43.34 4.35
4946 5533 1.375523 CTGGTGGCCCTACGTTGTC 60.376 63.158 0.00 0.00 0.00 3.18
4947 5534 2.747686 CTGGTGGCCCTACGTTGT 59.252 61.111 0.00 0.00 0.00 3.32
4948 5535 1.546589 TACCTGGTGGCCCTACGTTG 61.547 60.000 10.23 0.00 36.63 4.10
4949 5536 0.837260 TTACCTGGTGGCCCTACGTT 60.837 55.000 10.23 0.00 36.63 3.99
4950 5537 0.837260 TTTACCTGGTGGCCCTACGT 60.837 55.000 10.23 0.00 36.63 3.57
4951 5538 0.544697 ATTTACCTGGTGGCCCTACG 59.455 55.000 10.23 0.00 36.63 3.51
4952 5539 2.820728 AATTTACCTGGTGGCCCTAC 57.179 50.000 10.23 0.00 36.63 3.18
4953 5540 3.592427 TGTAAATTTACCTGGTGGCCCTA 59.408 43.478 22.47 0.05 36.63 3.53
4954 5541 2.380590 TGTAAATTTACCTGGTGGCCCT 59.619 45.455 22.47 0.00 36.63 5.19
4955 5542 2.494471 GTGTAAATTTACCTGGTGGCCC 59.506 50.000 22.47 0.00 36.63 5.80
4956 5543 2.162809 CGTGTAAATTTACCTGGTGGCC 59.837 50.000 22.47 0.00 36.63 5.36
4957 5544 2.414957 GCGTGTAAATTTACCTGGTGGC 60.415 50.000 22.47 13.54 36.63 5.01
4958 5545 2.162809 GGCGTGTAAATTTACCTGGTGG 59.837 50.000 22.47 8.73 39.83 4.61
4959 5546 2.814919 TGGCGTGTAAATTTACCTGGTG 59.185 45.455 22.47 10.61 32.72 4.17
4960 5547 3.078837 CTGGCGTGTAAATTTACCTGGT 58.921 45.455 22.47 4.05 32.72 4.00
4961 5548 3.078837 ACTGGCGTGTAAATTTACCTGG 58.921 45.455 22.47 13.69 32.72 4.45
4962 5549 5.007332 GGATACTGGCGTGTAAATTTACCTG 59.993 44.000 22.47 16.25 32.72 4.00
4963 5550 5.121105 GGATACTGGCGTGTAAATTTACCT 58.879 41.667 22.47 4.16 32.72 3.08
4964 5551 4.274214 GGGATACTGGCGTGTAAATTTACC 59.726 45.833 22.47 13.98 32.72 2.85
4965 5552 4.877251 TGGGATACTGGCGTGTAAATTTAC 59.123 41.667 19.44 19.44 0.00 2.01
4966 5553 5.100344 TGGGATACTGGCGTGTAAATTTA 57.900 39.130 0.00 0.00 0.00 1.40
4967 5554 3.958018 TGGGATACTGGCGTGTAAATTT 58.042 40.909 0.00 0.00 0.00 1.82
4968 5555 3.637911 TGGGATACTGGCGTGTAAATT 57.362 42.857 0.00 0.00 0.00 1.82
4969 5556 3.637911 TTGGGATACTGGCGTGTAAAT 57.362 42.857 0.00 0.00 0.00 1.40
4970 5557 3.420300 TTTGGGATACTGGCGTGTAAA 57.580 42.857 0.00 0.00 0.00 2.01
4971 5558 3.637911 ATTTGGGATACTGGCGTGTAA 57.362 42.857 0.00 0.00 0.00 2.41
4972 5559 3.637911 AATTTGGGATACTGGCGTGTA 57.362 42.857 0.00 0.00 0.00 2.90
4973 5560 2.507407 AATTTGGGATACTGGCGTGT 57.493 45.000 0.00 0.00 0.00 4.49
4974 5561 5.529430 TGTATTAATTTGGGATACTGGCGTG 59.471 40.000 0.00 0.00 0.00 5.34
4975 5562 5.529800 GTGTATTAATTTGGGATACTGGCGT 59.470 40.000 0.00 0.00 0.00 5.68
4976 5563 5.333798 CGTGTATTAATTTGGGATACTGGCG 60.334 44.000 0.00 0.00 0.00 5.69
4977 5564 5.562113 GCGTGTATTAATTTGGGATACTGGC 60.562 44.000 0.00 0.00 0.00 4.85
4978 5565 5.333798 CGCGTGTATTAATTTGGGATACTGG 60.334 44.000 0.00 0.00 0.00 4.00
4979 5566 5.235616 ACGCGTGTATTAATTTGGGATACTG 59.764 40.000 12.93 0.00 0.00 2.74
4980 5567 5.362263 ACGCGTGTATTAATTTGGGATACT 58.638 37.500 12.93 0.00 0.00 2.12
4981 5568 5.234757 TGACGCGTGTATTAATTTGGGATAC 59.765 40.000 20.70 0.00 0.00 2.24
4982 5569 5.234757 GTGACGCGTGTATTAATTTGGGATA 59.765 40.000 20.70 0.00 0.00 2.59
4983 5570 4.034742 GTGACGCGTGTATTAATTTGGGAT 59.965 41.667 20.70 0.00 0.00 3.85
4984 5571 3.371591 GTGACGCGTGTATTAATTTGGGA 59.628 43.478 20.70 0.00 0.00 4.37
4985 5572 3.486209 GGTGACGCGTGTATTAATTTGGG 60.486 47.826 20.70 0.00 0.00 4.12
4986 5573 3.125487 TGGTGACGCGTGTATTAATTTGG 59.875 43.478 20.70 0.00 0.00 3.28
4987 5574 4.329296 TGGTGACGCGTGTATTAATTTG 57.671 40.909 20.70 0.00 0.00 2.32
4988 5575 4.378666 GGTTGGTGACGCGTGTATTAATTT 60.379 41.667 20.70 0.00 0.00 1.82
4989 5576 3.125658 GGTTGGTGACGCGTGTATTAATT 59.874 43.478 20.70 0.00 0.00 1.40
4990 5577 2.674357 GGTTGGTGACGCGTGTATTAAT 59.326 45.455 20.70 0.00 0.00 1.40
4991 5578 2.067766 GGTTGGTGACGCGTGTATTAA 58.932 47.619 20.70 2.03 0.00 1.40
4992 5579 1.000618 TGGTTGGTGACGCGTGTATTA 59.999 47.619 20.70 0.00 0.00 0.98
4993 5580 0.249953 TGGTTGGTGACGCGTGTATT 60.250 50.000 20.70 0.00 0.00 1.89
4994 5581 0.249953 TTGGTTGGTGACGCGTGTAT 60.250 50.000 20.70 0.00 0.00 2.29
4995 5582 1.143401 TTGGTTGGTGACGCGTGTA 59.857 52.632 20.70 1.49 0.00 2.90
4996 5583 2.125065 TTGGTTGGTGACGCGTGT 60.125 55.556 20.70 0.00 0.00 4.49
4997 5584 1.781025 ATGTTGGTTGGTGACGCGTG 61.781 55.000 20.70 0.00 0.00 5.34
4998 5585 1.525077 ATGTTGGTTGGTGACGCGT 60.525 52.632 13.85 13.85 0.00 6.01
4999 5586 1.082169 CATGTTGGTTGGTGACGCG 60.082 57.895 3.53 3.53 0.00 6.01
5000 5587 1.371635 GCATGTTGGTTGGTGACGC 60.372 57.895 0.00 0.00 0.00 5.19
5001 5588 0.040157 CAGCATGTTGGTTGGTGACG 60.040 55.000 0.85 0.00 43.50 4.35
5002 5589 1.267806 CTCAGCATGTTGGTTGGTGAC 59.732 52.381 9.87 0.00 44.23 3.67
5003 5590 1.142667 TCTCAGCATGTTGGTTGGTGA 59.857 47.619 9.87 5.57 46.19 4.02
5004 5591 1.608055 TCTCAGCATGTTGGTTGGTG 58.392 50.000 9.87 0.00 42.47 4.17
5005 5592 2.233271 CTTCTCAGCATGTTGGTTGGT 58.767 47.619 9.87 0.00 37.40 3.67
5006 5593 2.233271 ACTTCTCAGCATGTTGGTTGG 58.767 47.619 9.87 1.57 37.40 3.77
5007 5594 3.316029 TCAACTTCTCAGCATGTTGGTTG 59.684 43.478 17.31 17.31 39.87 3.77
5008 5595 3.554934 TCAACTTCTCAGCATGTTGGTT 58.445 40.909 9.87 3.14 39.87 3.67
5009 5596 3.213206 TCAACTTCTCAGCATGTTGGT 57.787 42.857 9.87 0.00 39.87 3.67
5010 5597 4.778534 AATCAACTTCTCAGCATGTTGG 57.221 40.909 9.87 0.96 39.87 3.77
5011 5598 5.628193 GTGAAATCAACTTCTCAGCATGTTG 59.372 40.000 2.65 2.65 40.53 3.33
5012 5599 5.278660 GGTGAAATCAACTTCTCAGCATGTT 60.279 40.000 0.00 0.00 36.54 2.71
5013 5600 4.217118 GGTGAAATCAACTTCTCAGCATGT 59.783 41.667 0.00 0.00 36.54 3.21
5014 5601 4.380233 GGGTGAAATCAACTTCTCAGCATG 60.380 45.833 0.00 0.00 37.90 4.06
5015 5602 3.760684 GGGTGAAATCAACTTCTCAGCAT 59.239 43.478 0.00 0.00 37.90 3.79
5016 5603 3.149196 GGGTGAAATCAACTTCTCAGCA 58.851 45.455 0.00 0.00 37.90 4.41
5017 5604 3.149196 TGGGTGAAATCAACTTCTCAGC 58.851 45.455 0.00 0.00 35.95 4.26
5018 5605 4.823989 ACTTGGGTGAAATCAACTTCTCAG 59.176 41.667 0.00 0.00 33.16 3.35
5019 5606 4.580167 CACTTGGGTGAAATCAACTTCTCA 59.420 41.667 0.00 0.00 45.61 3.27
5020 5607 4.022849 CCACTTGGGTGAAATCAACTTCTC 60.023 45.833 0.00 0.00 45.61 2.87
5021 5608 3.891366 CCACTTGGGTGAAATCAACTTCT 59.109 43.478 0.00 0.00 45.61 2.85
5022 5609 4.243007 CCACTTGGGTGAAATCAACTTC 57.757 45.455 0.00 0.00 45.61 3.01
5036 5623 0.872388 GCTCACGTTTACCCACTTGG 59.128 55.000 0.00 0.00 41.37 3.61
5037 5624 0.511221 CGCTCACGTTTACCCACTTG 59.489 55.000 0.00 0.00 33.53 3.16
5038 5625 1.226030 GCGCTCACGTTTACCCACTT 61.226 55.000 0.00 0.00 42.83 3.16
5039 5626 1.666872 GCGCTCACGTTTACCCACT 60.667 57.895 0.00 0.00 42.83 4.00
5040 5627 1.500512 TTGCGCTCACGTTTACCCAC 61.501 55.000 9.73 0.00 42.83 4.61
5041 5628 0.814410 TTTGCGCTCACGTTTACCCA 60.814 50.000 9.73 0.00 42.83 4.51
5042 5629 0.308376 TTTTGCGCTCACGTTTACCC 59.692 50.000 9.73 0.00 42.83 3.69
5043 5630 1.776897 GTTTTTGCGCTCACGTTTACC 59.223 47.619 9.73 0.00 42.83 2.85
5044 5631 2.442424 TGTTTTTGCGCTCACGTTTAC 58.558 42.857 9.73 0.00 42.83 2.01
5045 5632 2.826979 TGTTTTTGCGCTCACGTTTA 57.173 40.000 9.73 0.00 42.83 2.01
5046 5633 2.116366 GATGTTTTTGCGCTCACGTTT 58.884 42.857 9.73 0.00 42.83 3.60
5047 5634 1.599419 GGATGTTTTTGCGCTCACGTT 60.599 47.619 9.73 0.00 42.83 3.99
5048 5635 0.040425 GGATGTTTTTGCGCTCACGT 60.040 50.000 9.73 0.76 42.83 4.49
5049 5636 0.729140 GGGATGTTTTTGCGCTCACG 60.729 55.000 9.73 0.00 44.07 4.35
5050 5637 0.388520 GGGGATGTTTTTGCGCTCAC 60.389 55.000 9.73 0.00 0.00 3.51
5051 5638 1.861542 CGGGGATGTTTTTGCGCTCA 61.862 55.000 9.73 0.44 0.00 4.26
5052 5639 1.154035 CGGGGATGTTTTTGCGCTC 60.154 57.895 9.73 0.00 0.00 5.03
5053 5640 2.635443 CCGGGGATGTTTTTGCGCT 61.635 57.895 9.73 0.00 0.00 5.92
5054 5641 1.944234 ATCCGGGGATGTTTTTGCGC 61.944 55.000 0.00 0.00 32.98 6.09
5055 5642 1.384525 TATCCGGGGATGTTTTTGCG 58.615 50.000 10.48 0.00 36.17 4.85
5056 5643 3.506067 CCTATATCCGGGGATGTTTTTGC 59.494 47.826 10.48 0.00 36.17 3.68
5057 5644 4.079253 CCCTATATCCGGGGATGTTTTTG 58.921 47.826 10.48 0.00 45.18 2.44
5058 5645 4.382386 CCCTATATCCGGGGATGTTTTT 57.618 45.455 10.48 0.00 45.18 1.94
5067 5654 1.273666 ACCTAAGCCCCTATATCCGGG 60.274 57.143 0.00 3.08 42.82 5.73
5068 5655 2.249309 ACCTAAGCCCCTATATCCGG 57.751 55.000 0.00 0.00 0.00 5.14
5069 5656 5.952347 AAATACCTAAGCCCCTATATCCG 57.048 43.478 0.00 0.00 0.00 4.18
5070 5657 7.696017 TGAAAAATACCTAAGCCCCTATATCC 58.304 38.462 0.00 0.00 0.00 2.59
5071 5658 9.178758 CATGAAAAATACCTAAGCCCCTATATC 57.821 37.037 0.00 0.00 0.00 1.63
5072 5659 8.116026 CCATGAAAAATACCTAAGCCCCTATAT 58.884 37.037 0.00 0.00 0.00 0.86
5073 5660 7.296150 TCCATGAAAAATACCTAAGCCCCTATA 59.704 37.037 0.00 0.00 0.00 1.31
5074 5661 6.104094 TCCATGAAAAATACCTAAGCCCCTAT 59.896 38.462 0.00 0.00 0.00 2.57
5075 5662 5.433712 TCCATGAAAAATACCTAAGCCCCTA 59.566 40.000 0.00 0.00 0.00 3.53
5076 5663 4.231890 TCCATGAAAAATACCTAAGCCCCT 59.768 41.667 0.00 0.00 0.00 4.79
5077 5664 4.542697 TCCATGAAAAATACCTAAGCCCC 58.457 43.478 0.00 0.00 0.00 5.80
5078 5665 6.731292 ATTCCATGAAAAATACCTAAGCCC 57.269 37.500 0.00 0.00 0.00 5.19
5079 5666 7.781056 TGAATTCCATGAAAAATACCTAAGCC 58.219 34.615 2.27 0.00 0.00 4.35
5080 5667 9.822185 AATGAATTCCATGAAAAATACCTAAGC 57.178 29.630 2.27 0.00 35.24 3.09
5083 5670 9.598517 GCAAATGAATTCCATGAAAAATACCTA 57.401 29.630 2.27 0.00 35.24 3.08
5084 5671 8.102047 TGCAAATGAATTCCATGAAAAATACCT 58.898 29.630 2.27 0.00 35.24 3.08
5085 5672 8.177013 GTGCAAATGAATTCCATGAAAAATACC 58.823 33.333 2.27 0.00 35.24 2.73
5086 5673 8.938906 AGTGCAAATGAATTCCATGAAAAATAC 58.061 29.630 2.27 0.00 35.24 1.89
5087 5674 9.153721 GAGTGCAAATGAATTCCATGAAAAATA 57.846 29.630 2.27 0.00 35.24 1.40
5088 5675 7.881232 AGAGTGCAAATGAATTCCATGAAAAAT 59.119 29.630 2.27 0.00 35.24 1.82
5123 5710 8.712228 AAGGTTTGAGTGGATAGAAATTTTCT 57.288 30.769 15.57 15.57 43.72 2.52
5133 5720 9.753674 AATTCTATCAAAAGGTTTGAGTGGATA 57.246 29.630 9.13 0.00 0.00 2.59
5165 5752 8.333186 ACGAGTGTTTGATAGTACAAGAAAAAC 58.667 33.333 0.00 0.39 0.00 2.43
5171 5761 8.462143 AATGTACGAGTGTTTGATAGTACAAG 57.538 34.615 9.75 0.00 44.64 3.16
5192 5782 2.158957 ACTCCGGCGAATACATGAATGT 60.159 45.455 9.30 0.95 44.48 2.71
5246 5836 3.379688 GTCCTCTTTGATTTGCAGGATCC 59.620 47.826 2.48 2.48 35.69 3.36
5247 5837 3.379688 GGTCCTCTTTGATTTGCAGGATC 59.620 47.826 5.46 5.46 35.69 3.36
5255 5845 4.625607 AGTTCGAGGTCCTCTTTGATTT 57.374 40.909 17.00 0.00 0.00 2.17
5314 6113 6.979817 TGACAATGTTGATTTCAGGTTTTCTG 59.020 34.615 0.00 0.00 44.68 3.02
5331 6130 2.158769 TGGCAGTCTTGAGTGACAATGT 60.159 45.455 11.22 0.00 39.27 2.71
5333 6132 2.936919 TGGCAGTCTTGAGTGACAAT 57.063 45.000 11.22 0.00 39.27 2.71
5337 6136 1.351076 TCCATGGCAGTCTTGAGTGA 58.649 50.000 6.96 0.00 0.00 3.41
5357 6156 5.108187 ACTAGAATGACAATGTCCATGCT 57.892 39.130 11.24 10.44 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.