Multiple sequence alignment - TraesCS7A01G389400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G389400 chr7A 100.000 5117 0 0 1 5117 565807160 565802044 0.000000e+00 9450.0
1 TraesCS7A01G389400 chr7A 85.279 197 25 3 4894 5086 705951724 705951920 3.120000e-47 200.0
2 TraesCS7A01G389400 chr7A 100.000 50 0 0 4124 4173 565802987 565802938 5.460000e-15 93.5
3 TraesCS7A01G389400 chr7A 100.000 50 0 0 4174 4223 565803037 565802988 5.460000e-15 93.5
4 TraesCS7A01G389400 chr7A 93.023 43 2 1 1630 1672 37812355 37812314 1.540000e-05 62.1
5 TraesCS7A01G389400 chr7D 91.183 1395 71 24 80 1461 499904447 499903092 0.000000e+00 1847.0
6 TraesCS7A01G389400 chr7D 92.581 957 49 7 3225 4173 499901160 499900218 0.000000e+00 1354.0
7 TraesCS7A01G389400 chr7D 92.545 550 25 4 2754 3301 499901580 499901045 0.000000e+00 774.0
8 TraesCS7A01G389400 chr7D 85.270 611 74 12 4517 5114 499891409 499890802 2.620000e-172 616.0
9 TraesCS7A01G389400 chr7D 89.076 119 7 2 1450 1568 499903077 499902965 5.340000e-30 143.0
10 TraesCS7A01G389400 chr7D 94.667 75 4 0 2233 2307 499901943 499902017 3.240000e-22 117.0
11 TraesCS7A01G389400 chr7B 89.926 943 61 11 3225 4163 527877813 527876901 0.000000e+00 1184.0
12 TraesCS7A01G389400 chr7B 89.979 938 42 19 82 1018 527881263 527880377 0.000000e+00 1164.0
13 TraesCS7A01G389400 chr7B 90.023 872 75 8 4249 5115 527862400 527861536 0.000000e+00 1118.0
14 TraesCS7A01G389400 chr7B 91.271 653 39 4 2653 3301 527878333 527877695 0.000000e+00 874.0
15 TraesCS7A01G389400 chr7B 87.816 435 40 5 1206 1640 527880249 527879828 9.890000e-137 497.0
16 TraesCS7A01G389400 chr7B 84.165 461 59 8 1779 2231 527879249 527878795 7.870000e-118 435.0
17 TraesCS7A01G389400 chr7B 94.444 36 0 1 1631 1664 712515750 712515715 3.000000e-03 54.7
18 TraesCS7A01G389400 chr2B 85.864 191 21 5 4894 5082 212558939 212558753 1.120000e-46 198.0
19 TraesCS7A01G389400 chr1D 85.263 190 25 3 4894 5081 423281884 423281696 5.230000e-45 193.0
20 TraesCS7A01G389400 chr3D 81.858 226 33 6 4894 5114 583468263 583468485 3.150000e-42 183.0
21 TraesCS7A01G389400 chr3D 82.906 117 10 10 4685 4796 154175861 154175972 4.220000e-16 97.1
22 TraesCS7A01G389400 chr3D 94.286 35 2 0 1638 1672 472710627 472710593 3.000000e-03 54.7
23 TraesCS7A01G389400 chr1A 81.696 224 34 6 4894 5114 558098553 558098334 4.070000e-41 180.0
24 TraesCS7A01G389400 chr3B 81.696 224 32 7 4894 5114 708477682 708477465 1.460000e-40 178.0
25 TraesCS7A01G389400 chr3B 90.698 43 2 2 1630 1672 11069757 11069717 7.160000e-04 56.5
26 TraesCS7A01G389400 chr3B 96.970 33 1 0 1640 1672 795180398 795180430 7.160000e-04 56.5
27 TraesCS7A01G389400 chr3A 81.250 224 35 6 4894 5114 180230782 180231001 1.890000e-39 174.0
28 TraesCS7A01G389400 chr4A 81.481 135 21 3 1541 1672 612373856 612373989 1.950000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G389400 chr7A 565802044 565807160 5116 True 9450.0 9450 100.00000 1 5117 1 chr7A.!!$R2 5116
1 TraesCS7A01G389400 chr7D 499900218 499904447 4229 True 1029.5 1847 91.34625 80 4173 4 chr7D.!!$R2 4093
2 TraesCS7A01G389400 chr7D 499890802 499891409 607 True 616.0 616 85.27000 4517 5114 1 chr7D.!!$R1 597
3 TraesCS7A01G389400 chr7B 527861536 527862400 864 True 1118.0 1118 90.02300 4249 5115 1 chr7B.!!$R1 866
4 TraesCS7A01G389400 chr7B 527876901 527881263 4362 True 830.8 1184 88.63140 82 4163 5 chr7B.!!$R3 4081

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.026803 GAATGCACCGCAAGTCGATC 59.973 55.0 0.00 0.00 43.62 3.69 F
1719 2249 0.615850 GTCACCTGCCTAGAAAGCCT 59.384 55.0 0.00 0.00 0.00 4.58 F
2361 2899 0.110238 CCAGTTTTGACGACGGCATG 60.110 55.0 3.10 0.00 0.00 4.06 F
2367 2905 0.249699 TTGACGACGGCATGTCAACT 60.250 50.0 3.10 0.00 46.86 3.16 F
3791 4449 0.039437 ACCGAGACATGACGTGTGTC 60.039 55.0 18.29 18.29 45.13 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 2344 0.038310 GGGAGCAGGGTAGCACTTTT 59.962 55.0 0.00 0.0 36.85 2.27 R
2925 3571 0.806868 TGAAGTAGACCGTGTAGCCG 59.193 55.0 0.00 0.0 0.00 5.52 R
3772 4430 0.039437 GACACACGTCATGTCTCGGT 60.039 55.0 18.18 0.0 40.64 4.69 R
3989 4647 1.003108 CGTGCAAAAACCAACCCAAC 58.997 50.0 0.00 0.0 0.00 3.77 R
5008 5686 0.108424 GGCAGGTTTTTGTGTGTGCA 60.108 50.0 0.00 0.0 32.42 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.245732 GATGGCTGGAGATTGCATCC 58.754 55.000 0.00 0.00 37.35 3.51
20 21 0.178970 ATGGCTGGAGATTGCATCCC 60.179 55.000 2.38 0.00 35.86 3.85
21 22 1.228228 GGCTGGAGATTGCATCCCA 59.772 57.895 2.38 0.25 35.86 4.37
22 23 0.178970 GGCTGGAGATTGCATCCCAT 60.179 55.000 2.38 0.00 35.86 4.00
23 24 0.959553 GCTGGAGATTGCATCCCATG 59.040 55.000 2.38 0.00 35.86 3.66
24 25 1.617322 CTGGAGATTGCATCCCATGG 58.383 55.000 4.14 4.14 35.86 3.66
25 26 0.468585 TGGAGATTGCATCCCATGGC 60.469 55.000 6.09 0.00 35.86 4.40
26 27 0.178970 GGAGATTGCATCCCATGGCT 60.179 55.000 6.09 0.00 0.00 4.75
27 28 0.959553 GAGATTGCATCCCATGGCTG 59.040 55.000 6.09 7.22 0.00 4.85
28 29 1.113517 AGATTGCATCCCATGGCTGC 61.114 55.000 23.60 23.60 36.45 5.25
29 30 2.416244 GATTGCATCCCATGGCTGCG 62.416 60.000 24.24 6.27 38.75 5.18
47 48 3.827634 GGCAGATCGGCCGAATTT 58.172 55.556 34.66 17.17 45.40 1.82
48 49 2.106844 GGCAGATCGGCCGAATTTT 58.893 52.632 34.66 16.72 45.40 1.82
49 50 0.029433 GGCAGATCGGCCGAATTTTC 59.971 55.000 34.66 24.74 45.40 2.29
59 60 4.109693 GAATTTTCGGCCGGCGCA 62.110 61.111 27.83 6.00 36.38 6.09
60 61 4.413800 AATTTTCGGCCGGCGCAC 62.414 61.111 27.83 5.60 36.38 5.34
143 144 4.806640 TTCCCATCCTGAAAAAGAATGC 57.193 40.909 0.00 0.00 0.00 3.56
157 158 0.026803 GAATGCACCGCAAGTCGATC 59.973 55.000 0.00 0.00 43.62 3.69
158 159 1.695893 AATGCACCGCAAGTCGATCG 61.696 55.000 9.36 9.36 43.62 3.69
162 163 1.445582 ACCGCAAGTCGATCGGAAC 60.446 57.895 16.41 7.08 45.53 3.62
163 164 1.153823 CCGCAAGTCGATCGGAACT 60.154 57.895 16.41 9.57 45.53 3.01
244 245 2.537625 CCGCGTTCATCTCATTCTTCTC 59.462 50.000 4.92 0.00 0.00 2.87
282 283 6.463995 AACAGCAAATTCACTAAACAAGGA 57.536 33.333 0.00 0.00 0.00 3.36
302 303 7.710907 ACAAGGATACACACATACATACATGAC 59.289 37.037 0.00 0.00 41.41 3.06
320 325 4.290711 TGACACATCAGACCACATCATT 57.709 40.909 0.00 0.00 0.00 2.57
336 341 3.744238 TCATTCGTGGAAGTCAGTTCA 57.256 42.857 0.00 0.00 36.82 3.18
341 346 1.067846 CGTGGAAGTCAGTTCATCCGA 60.068 52.381 0.00 0.00 36.82 4.55
380 385 1.138464 GACGGAACCAACCTCCTATCC 59.862 57.143 0.00 0.00 0.00 2.59
381 386 1.273666 ACGGAACCAACCTCCTATCCT 60.274 52.381 0.00 0.00 0.00 3.24
382 387 2.023695 ACGGAACCAACCTCCTATCCTA 60.024 50.000 0.00 0.00 0.00 2.94
383 388 3.240302 CGGAACCAACCTCCTATCCTAT 58.760 50.000 0.00 0.00 0.00 2.57
384 389 3.258622 CGGAACCAACCTCCTATCCTATC 59.741 52.174 0.00 0.00 0.00 2.08
419 425 1.355796 TAAACAAGCGCACCGATCGG 61.356 55.000 32.20 32.20 42.03 4.18
436 442 4.148825 GACCGATGAGGCGCCAGT 62.149 66.667 31.54 14.19 46.52 4.00
745 758 1.500512 GGTCGATCGACTCCTCCTCG 61.501 65.000 38.48 2.77 44.04 4.63
766 779 2.512515 GATGGCCGTGAGTGCTCC 60.513 66.667 0.00 0.00 0.00 4.70
767 780 3.005539 ATGGCCGTGAGTGCTCCT 61.006 61.111 0.00 0.00 0.00 3.69
768 781 2.914777 GATGGCCGTGAGTGCTCCTC 62.915 65.000 0.00 0.00 40.89 3.71
769 782 4.459089 GGCCGTGAGTGCTCCTCC 62.459 72.222 0.00 0.00 39.65 4.30
770 783 3.386237 GCCGTGAGTGCTCCTCCT 61.386 66.667 0.00 0.00 39.65 3.69
771 784 2.888863 CCGTGAGTGCTCCTCCTC 59.111 66.667 0.00 0.00 39.65 3.71
772 785 2.716017 CCGTGAGTGCTCCTCCTCC 61.716 68.421 0.00 0.00 39.65 4.30
773 786 2.716017 CGTGAGTGCTCCTCCTCCC 61.716 68.421 0.00 0.00 39.65 4.30
774 787 2.039624 TGAGTGCTCCTCCTCCCC 59.960 66.667 0.00 0.00 39.65 4.81
775 788 2.366570 GAGTGCTCCTCCTCCCCT 59.633 66.667 0.00 0.00 33.79 4.79
796 809 4.505970 CTCCCCTCCCCTCCCCTG 62.506 77.778 0.00 0.00 0.00 4.45
808 821 2.276309 CTCCCCTGGCTTCCATGTCC 62.276 65.000 0.00 0.00 30.82 4.02
809 822 2.124570 CCCTGGCTTCCATGTCCG 60.125 66.667 0.00 0.00 30.82 4.79
810 823 2.671070 CCTGGCTTCCATGTCCGT 59.329 61.111 0.00 0.00 30.82 4.69
811 824 1.002134 CCTGGCTTCCATGTCCGTT 60.002 57.895 0.00 0.00 30.82 4.44
888 901 2.609459 CCTGTGCTCCTAGCGTAAATTG 59.391 50.000 0.00 0.00 46.26 2.32
890 903 3.000041 TGTGCTCCTAGCGTAAATTGTG 59.000 45.455 0.00 0.00 46.26 3.33
891 904 2.351726 GTGCTCCTAGCGTAAATTGTGG 59.648 50.000 0.00 0.00 46.26 4.17
892 905 2.027561 TGCTCCTAGCGTAAATTGTGGT 60.028 45.455 0.00 0.00 46.26 4.16
895 908 4.250464 CTCCTAGCGTAAATTGTGGTTGA 58.750 43.478 0.00 0.00 0.00 3.18
897 910 4.873827 TCCTAGCGTAAATTGTGGTTGATC 59.126 41.667 0.00 0.00 0.00 2.92
898 911 4.035208 CCTAGCGTAAATTGTGGTTGATCC 59.965 45.833 0.00 0.00 0.00 3.36
972 985 0.733150 GTTCCATCGCCTTGCCTTAC 59.267 55.000 0.00 0.00 0.00 2.34
984 997 4.051922 CCTTGCCTTACGATCATGTCTAC 58.948 47.826 0.00 0.00 0.00 2.59
994 1007 5.645624 ACGATCATGTCTACAACTCTTCAG 58.354 41.667 0.00 0.00 0.00 3.02
1018 1031 0.937304 AACCCAAATCATCGATCGCG 59.063 50.000 11.09 0.00 39.35 5.87
1019 1032 0.880278 ACCCAAATCATCGATCGCGG 60.880 55.000 11.09 4.78 38.28 6.46
1059 1072 3.062234 CGTCGAAATGGAAGCTTTAGGAC 59.938 47.826 0.00 1.48 0.00 3.85
1082 1095 1.136891 GGAAAGTTGCAACTGCCAAGT 59.863 47.619 31.58 17.04 39.66 3.16
1097 1110 3.598019 CCAAGTGGCAAAATACAGCAT 57.402 42.857 0.00 0.00 0.00 3.79
1101 1114 5.105797 CCAAGTGGCAAAATACAGCATAGAA 60.106 40.000 0.00 0.00 0.00 2.10
1107 1120 6.183360 TGGCAAAATACAGCATAGAAGGAATG 60.183 38.462 0.00 0.00 0.00 2.67
1134 1147 0.808755 AAATTGGGTGCGTCGGAATC 59.191 50.000 0.00 0.00 0.00 2.52
1148 1161 1.986378 CGGAATCTAATCGCGGTGATC 59.014 52.381 6.13 0.00 35.84 2.92
1149 1162 2.338500 GGAATCTAATCGCGGTGATCC 58.662 52.381 6.13 0.00 35.84 3.36
1166 1179 7.005062 GGTGATCCGATTGTGCATATTATAC 57.995 40.000 0.00 0.00 0.00 1.47
1167 1180 6.037172 GGTGATCCGATTGTGCATATTATACC 59.963 42.308 0.00 0.00 0.00 2.73
1170 1183 7.979537 TGATCCGATTGTGCATATTATACCTAC 59.020 37.037 0.00 0.00 0.00 3.18
1219 1232 0.620556 CCAAGGCAGGGTATGTGTCT 59.379 55.000 0.00 0.00 0.00 3.41
1228 1241 1.472376 GGGTATGTGTCTGCTCTCTGC 60.472 57.143 0.00 0.00 43.25 4.26
1239 1252 2.559998 GCTCTCTGCAGTCTGTACTC 57.440 55.000 14.67 0.00 42.31 2.59
1240 1253 2.091541 GCTCTCTGCAGTCTGTACTCT 58.908 52.381 14.67 0.00 42.31 3.24
1241 1254 2.159393 GCTCTCTGCAGTCTGTACTCTG 60.159 54.545 14.67 1.95 42.31 3.35
1242 1255 3.081061 CTCTCTGCAGTCTGTACTCTGT 58.919 50.000 14.67 0.00 31.97 3.41
1243 1256 4.257731 CTCTCTGCAGTCTGTACTCTGTA 58.742 47.826 14.67 8.56 31.97 2.74
1244 1257 4.849518 TCTCTGCAGTCTGTACTCTGTAT 58.150 43.478 14.67 0.00 31.97 2.29
1338 1351 0.732880 CGGAGACACTTTCGCACGAT 60.733 55.000 0.00 0.00 0.00 3.73
1339 1352 0.716108 GGAGACACTTTCGCACGATG 59.284 55.000 0.00 0.00 0.00 3.84
1403 1416 3.325870 TGGCAGATTTACGAGTTGACTG 58.674 45.455 0.00 0.00 0.00 3.51
1404 1417 2.673368 GGCAGATTTACGAGTTGACTGG 59.327 50.000 0.00 0.00 0.00 4.00
1415 1428 2.572104 GAGTTGACTGGGATTAGGGTGT 59.428 50.000 0.00 0.00 0.00 4.16
1417 1430 1.191535 TGACTGGGATTAGGGTGTCG 58.808 55.000 0.00 0.00 0.00 4.35
1429 1442 2.180276 AGGGTGTCGATCAGCTAAACT 58.820 47.619 13.97 3.74 43.26 2.66
1436 1449 7.042658 GGGTGTCGATCAGCTAAACTTAATTAG 60.043 40.741 13.97 0.00 43.26 1.73
1448 1461 6.628919 AAACTTAATTAGCTGGTCGTTTGT 57.371 33.333 0.00 0.00 0.00 2.83
1461 1474 5.524284 TGGTCGTTTGTTCCAATAAACATG 58.476 37.500 10.96 0.00 39.17 3.21
1512 1551 7.511268 TGACTTTCTTTAGGTTAAGTGGCTAA 58.489 34.615 0.00 0.00 31.41 3.09
1513 1552 8.161425 TGACTTTCTTTAGGTTAAGTGGCTAAT 58.839 33.333 0.00 0.00 31.41 1.73
1550 1589 4.283678 TGTTATCGAAAACGGTTTTGCTG 58.716 39.130 22.44 12.22 31.94 4.41
1553 1592 2.281517 TCGAAAACGGTTTTGCTGAGA 58.718 42.857 22.44 10.95 31.94 3.27
1607 1669 5.500234 TCTAAGTCCCCTGTCATTGATTTG 58.500 41.667 0.00 0.00 0.00 2.32
1635 1697 7.333528 TGAAGATTCATGCAGGTATTTTACC 57.666 36.000 0.00 0.00 39.65 2.85
1707 2237 6.767423 TGTTGATGGATATGTTATGTCACCTG 59.233 38.462 0.00 0.00 0.00 4.00
1708 2238 5.308014 TGATGGATATGTTATGTCACCTGC 58.692 41.667 0.00 0.00 0.00 4.85
1712 2242 5.012046 TGGATATGTTATGTCACCTGCCTAG 59.988 44.000 0.00 0.00 0.00 3.02
1719 2249 0.615850 GTCACCTGCCTAGAAAGCCT 59.384 55.000 0.00 0.00 0.00 4.58
1732 2262 3.460103 AGAAAGCCTGCAATGTTGTTTG 58.540 40.909 0.00 0.00 0.00 2.93
1735 2265 4.870123 AAGCCTGCAATGTTGTTTGATA 57.130 36.364 0.00 0.00 0.00 2.15
1736 2266 5.410355 AAGCCTGCAATGTTGTTTGATAT 57.590 34.783 0.00 0.00 0.00 1.63
1737 2267 4.751060 AGCCTGCAATGTTGTTTGATATG 58.249 39.130 0.00 0.00 0.00 1.78
1739 2269 4.931002 GCCTGCAATGTTGTTTGATATGTT 59.069 37.500 0.00 0.00 0.00 2.71
1740 2270 5.409214 GCCTGCAATGTTGTTTGATATGTTT 59.591 36.000 0.00 0.00 0.00 2.83
1741 2271 6.589523 GCCTGCAATGTTGTTTGATATGTTTA 59.410 34.615 0.00 0.00 0.00 2.01
1742 2272 7.278424 GCCTGCAATGTTGTTTGATATGTTTAT 59.722 33.333 0.00 0.00 0.00 1.40
1744 2274 7.961855 TGCAATGTTGTTTGATATGTTTATGC 58.038 30.769 0.00 0.00 0.00 3.14
1745 2275 7.064371 TGCAATGTTGTTTGATATGTTTATGCC 59.936 33.333 0.00 0.00 0.00 4.40
1747 2277 8.382130 CAATGTTGTTTGATATGTTTATGCCAC 58.618 33.333 0.00 0.00 0.00 5.01
1750 2280 6.986904 TGTTTGATATGTTTATGCCACGTA 57.013 33.333 0.00 0.00 0.00 3.57
1753 2283 9.278978 TGTTTGATATGTTTATGCCACGTATAT 57.721 29.630 0.00 0.00 0.00 0.86
1845 2375 3.099141 CCCTGCTCCCAAACATAAATGT 58.901 45.455 0.00 0.00 44.20 2.71
1916 2448 6.360844 TCTTTTTGCATCAAACATTGGTTG 57.639 33.333 8.17 8.17 37.30 3.77
1918 2450 2.835580 TGCATCAAACATTGGTTGGG 57.164 45.000 14.24 8.33 37.30 4.12
1923 2455 1.683917 TCAAACATTGGTTGGGGTTCG 59.316 47.619 14.24 0.00 37.30 3.95
1925 2457 2.298729 CAAACATTGGTTGGGGTTCGAT 59.701 45.455 6.54 0.00 37.30 3.59
1935 2467 1.031571 GGGGTTCGATCTGCATGCAA 61.032 55.000 22.88 13.05 0.00 4.08
1952 2484 5.221009 GCATGCAAATTTTCTTGAAACCCAA 60.221 36.000 14.21 0.00 0.00 4.12
1993 2525 1.614996 ATGCCATTCGTGGTTGTTCA 58.385 45.000 0.00 0.00 0.00 3.18
2022 2554 2.422276 AAAACAAGACCAATGCTCGC 57.578 45.000 0.00 0.00 0.00 5.03
2047 2579 7.290118 CGGATGTTTTGAAAATAGCCTTTTTG 58.710 34.615 17.36 0.75 0.00 2.44
2054 2586 8.449251 TTTGAAAATAGCCTTTTTGAAGCATT 57.551 26.923 0.00 0.00 0.00 3.56
2074 2606 7.124347 GCATTGATTTTGCTTTTCATTCAGA 57.876 32.000 0.00 0.00 37.14 3.27
2077 2609 8.984764 CATTGATTTTGCTTTTCATTCAGAAGA 58.015 29.630 0.00 0.00 37.57 2.87
2078 2610 7.935338 TGATTTTGCTTTTCATTCAGAAGAC 57.065 32.000 0.00 0.00 37.57 3.01
2079 2611 7.490840 TGATTTTGCTTTTCATTCAGAAGACA 58.509 30.769 0.00 0.00 37.57 3.41
2097 2630 9.525409 CAGAAGACAACAAATGATTTTTCTTCT 57.475 29.630 17.02 17.02 41.53 2.85
2098 2631 9.741647 AGAAGACAACAAATGATTTTTCTTCTC 57.258 29.630 17.02 3.85 39.15 2.87
2126 2659 5.576447 TCTGCACGTAGATAGAACATTCA 57.424 39.130 0.00 0.00 0.00 2.57
2127 2660 5.961272 TCTGCACGTAGATAGAACATTCAA 58.039 37.500 0.00 0.00 0.00 2.69
2182 2720 7.873719 TTTCAGATTTTACTGTTCACAAGGA 57.126 32.000 0.00 0.00 38.79 3.36
2190 2728 7.701539 TTTACTGTTCACAAGGATGCATATT 57.298 32.000 0.00 0.00 0.00 1.28
2231 2769 9.305555 TCTAAGTTTAGTACCTCAACTATGTGT 57.694 33.333 3.12 0.00 29.24 3.72
2232 2770 9.570488 CTAAGTTTAGTACCTCAACTATGTGTC 57.430 37.037 3.12 0.00 29.24 3.67
2233 2771 6.932947 AGTTTAGTACCTCAACTATGTGTCC 58.067 40.000 1.09 0.00 32.16 4.02
2234 2772 6.495872 AGTTTAGTACCTCAACTATGTGTCCA 59.504 38.462 1.09 0.00 32.16 4.02
2235 2773 6.525578 TTAGTACCTCAACTATGTGTCCAG 57.474 41.667 0.00 0.00 32.16 3.86
2236 2774 4.673968 AGTACCTCAACTATGTGTCCAGA 58.326 43.478 0.00 0.00 0.00 3.86
2238 2776 6.432581 AGTACCTCAACTATGTGTCCAGATA 58.567 40.000 0.00 0.00 0.00 1.98
2239 2777 7.069986 AGTACCTCAACTATGTGTCCAGATAT 58.930 38.462 0.00 0.00 0.00 1.63
2240 2778 6.814954 ACCTCAACTATGTGTCCAGATATT 57.185 37.500 0.00 0.00 0.00 1.28
2241 2779 6.821388 ACCTCAACTATGTGTCCAGATATTC 58.179 40.000 0.00 0.00 0.00 1.75
2242 2780 6.613271 ACCTCAACTATGTGTCCAGATATTCT 59.387 38.462 0.00 0.00 0.00 2.40
2243 2781 7.126421 ACCTCAACTATGTGTCCAGATATTCTT 59.874 37.037 0.00 0.00 0.00 2.52
2245 2783 7.851228 TCAACTATGTGTCCAGATATTCTTGT 58.149 34.615 0.00 0.00 0.00 3.16
2246 2784 7.765819 TCAACTATGTGTCCAGATATTCTTGTG 59.234 37.037 0.00 0.00 0.00 3.33
2247 2785 7.187824 ACTATGTGTCCAGATATTCTTGTGT 57.812 36.000 0.00 0.00 0.00 3.72
2249 2787 4.832248 TGTGTCCAGATATTCTTGTGTCC 58.168 43.478 0.00 0.00 0.00 4.02
2251 2789 4.080863 GTGTCCAGATATTCTTGTGTCCCT 60.081 45.833 0.00 0.00 0.00 4.20
2252 2790 4.536090 TGTCCAGATATTCTTGTGTCCCTT 59.464 41.667 0.00 0.00 0.00 3.95
2254 2792 6.214615 TGTCCAGATATTCTTGTGTCCCTTTA 59.785 38.462 0.00 0.00 0.00 1.85
2255 2793 7.110155 GTCCAGATATTCTTGTGTCCCTTTAA 58.890 38.462 0.00 0.00 0.00 1.52
2256 2794 7.281100 GTCCAGATATTCTTGTGTCCCTTTAAG 59.719 40.741 0.00 0.00 0.00 1.85
2258 2796 7.611855 CCAGATATTCTTGTGTCCCTTTAAGTT 59.388 37.037 0.00 0.00 0.00 2.66
2260 2798 9.014297 AGATATTCTTGTGTCCCTTTAAGTTTG 57.986 33.333 0.00 0.00 0.00 2.93
2261 2799 8.934023 ATATTCTTGTGTCCCTTTAAGTTTGA 57.066 30.769 0.00 0.00 0.00 2.69
2264 2802 5.946972 TCTTGTGTCCCTTTAAGTTTGACAA 59.053 36.000 9.62 4.58 37.66 3.18
2265 2803 5.570234 TGTGTCCCTTTAAGTTTGACAAC 57.430 39.130 9.62 6.53 37.66 3.32
2266 2804 4.399934 TGTGTCCCTTTAAGTTTGACAACC 59.600 41.667 9.62 2.45 37.66 3.77
2271 2809 5.370289 TCCCTTTAAGTTTGACAACCCTCTA 59.630 40.000 0.00 0.00 32.70 2.43
2272 2810 6.045106 TCCCTTTAAGTTTGACAACCCTCTAT 59.955 38.462 0.00 0.00 32.70 1.98
2273 2811 7.238096 TCCCTTTAAGTTTGACAACCCTCTATA 59.762 37.037 0.00 0.00 32.70 1.31
2274 2812 8.053355 CCCTTTAAGTTTGACAACCCTCTATAT 58.947 37.037 0.00 0.00 32.70 0.86
2278 2816 7.611213 AAGTTTGACAACCCTCTATATTTCG 57.389 36.000 0.00 0.00 32.70 3.46
2279 2817 5.585047 AGTTTGACAACCCTCTATATTTCGC 59.415 40.000 0.00 0.00 32.70 4.70
2281 2819 5.353394 TGACAACCCTCTATATTTCGCTT 57.647 39.130 0.00 0.00 0.00 4.68
2283 2821 5.105106 TGACAACCCTCTATATTTCGCTTCA 60.105 40.000 0.00 0.00 0.00 3.02
2287 2825 6.426646 ACCCTCTATATTTCGCTTCATTCT 57.573 37.500 0.00 0.00 0.00 2.40
2288 2826 6.459923 ACCCTCTATATTTCGCTTCATTCTC 58.540 40.000 0.00 0.00 0.00 2.87
2289 2827 6.042093 ACCCTCTATATTTCGCTTCATTCTCA 59.958 38.462 0.00 0.00 0.00 3.27
2290 2828 6.367422 CCCTCTATATTTCGCTTCATTCTCAC 59.633 42.308 0.00 0.00 0.00 3.51
2292 2830 8.300286 CCTCTATATTTCGCTTCATTCTCACTA 58.700 37.037 0.00 0.00 0.00 2.74
2293 2831 9.684448 CTCTATATTTCGCTTCATTCTCACTAA 57.316 33.333 0.00 0.00 0.00 2.24
2297 2835 4.928661 TCGCTTCATTCTCACTAAAAGC 57.071 40.909 0.00 0.00 36.61 3.51
2298 2836 4.314961 TCGCTTCATTCTCACTAAAAGCA 58.685 39.130 5.83 0.00 39.17 3.91
2299 2837 4.389992 TCGCTTCATTCTCACTAAAAGCAG 59.610 41.667 5.83 0.00 39.17 4.24
2302 2840 6.442112 GCTTCATTCTCACTAAAAGCAGTTT 58.558 36.000 0.00 0.00 39.07 2.66
2303 2841 6.920210 GCTTCATTCTCACTAAAAGCAGTTTT 59.080 34.615 0.00 0.00 39.07 2.43
2304 2842 7.096312 GCTTCATTCTCACTAAAAGCAGTTTTG 60.096 37.037 0.00 0.00 39.07 2.44
2305 2843 7.566760 TCATTCTCACTAAAAGCAGTTTTGA 57.433 32.000 0.00 0.00 36.51 2.69
2306 2844 7.417612 TCATTCTCACTAAAAGCAGTTTTGAC 58.582 34.615 0.00 0.00 36.51 3.18
2308 2846 6.751514 TCTCACTAAAAGCAGTTTTGACAA 57.248 33.333 0.00 0.00 36.51 3.18
2309 2847 6.551736 TCTCACTAAAAGCAGTTTTGACAAC 58.448 36.000 0.00 0.00 36.51 3.32
2310 2848 5.646606 TCACTAAAAGCAGTTTTGACAACC 58.353 37.500 0.00 0.00 36.51 3.77
2313 2851 3.801114 AAAGCAGTTTTGACAACCCTC 57.199 42.857 0.00 0.00 0.00 4.30
2314 2852 2.736670 AGCAGTTTTGACAACCCTCT 57.263 45.000 0.00 0.00 0.00 3.69
2316 2854 4.373156 AGCAGTTTTGACAACCCTCTAT 57.627 40.909 0.00 0.00 0.00 1.98
2317 2855 5.499004 AGCAGTTTTGACAACCCTCTATA 57.501 39.130 0.00 0.00 0.00 1.31
2318 2856 6.067217 AGCAGTTTTGACAACCCTCTATAT 57.933 37.500 0.00 0.00 0.00 0.86
2319 2857 6.485171 AGCAGTTTTGACAACCCTCTATATT 58.515 36.000 0.00 0.00 0.00 1.28
2321 2859 7.451566 AGCAGTTTTGACAACCCTCTATATTTT 59.548 33.333 0.00 0.00 0.00 1.82
2323 2861 8.576442 CAGTTTTGACAACCCTCTATATTTTGT 58.424 33.333 0.00 0.00 33.12 2.83
2324 2862 8.793592 AGTTTTGACAACCCTCTATATTTTGTC 58.206 33.333 5.94 5.94 44.14 3.18
2325 2863 8.793592 GTTTTGACAACCCTCTATATTTTGTCT 58.206 33.333 12.53 0.00 44.18 3.41
2356 2894 4.525411 ACTAAAACCAGTTTTGACGACG 57.475 40.909 16.75 0.00 42.18 5.12
2357 2895 2.836479 AAAACCAGTTTTGACGACGG 57.164 45.000 7.68 0.00 40.84 4.79
2358 2896 0.379316 AAACCAGTTTTGACGACGGC 59.621 50.000 0.00 0.00 0.00 5.68
2359 2897 0.745128 AACCAGTTTTGACGACGGCA 60.745 50.000 0.00 0.00 0.00 5.69
2360 2898 0.534203 ACCAGTTTTGACGACGGCAT 60.534 50.000 3.10 0.00 0.00 4.40
2361 2899 0.110238 CCAGTTTTGACGACGGCATG 60.110 55.000 3.10 0.00 0.00 4.06
2362 2900 0.586319 CAGTTTTGACGACGGCATGT 59.414 50.000 3.10 0.00 0.00 3.21
2363 2901 0.865769 AGTTTTGACGACGGCATGTC 59.134 50.000 3.10 0.00 44.53 3.06
2366 2904 2.230892 TTGACGACGGCATGTCAAC 58.769 52.632 3.10 2.99 46.86 3.18
2367 2905 0.249699 TTGACGACGGCATGTCAACT 60.250 50.000 3.10 0.00 46.86 3.16
2368 2906 1.000052 TTGACGACGGCATGTCAACTA 60.000 47.619 3.10 0.00 46.86 2.24
2369 2907 2.353307 TTGACGACGGCATGTCAACTAT 60.353 45.455 3.10 0.00 46.86 2.12
2370 2908 3.863021 TTGACGACGGCATGTCAACTATT 60.863 43.478 3.10 0.00 46.86 1.73
2373 2911 7.504146 TTGACGACGGCATGTCAACTATTTTA 61.504 38.462 3.10 0.00 46.86 1.52
2374 2912 9.198467 TTGACGACGGCATGTCAACTATTTTAG 62.198 40.741 3.10 0.00 46.86 1.85
2376 2914 5.796350 ACGGCATGTCAACTATTTTAGAC 57.204 39.130 0.00 0.00 0.00 2.59
2377 2915 5.242434 ACGGCATGTCAACTATTTTAGACA 58.758 37.500 0.00 0.00 44.16 3.41
2378 2916 5.121768 ACGGCATGTCAACTATTTTAGACAC 59.878 40.000 0.00 0.00 43.01 3.67
2379 2917 5.351465 CGGCATGTCAACTATTTTAGACACT 59.649 40.000 0.00 0.00 43.01 3.55
2380 2918 6.128282 CGGCATGTCAACTATTTTAGACACTT 60.128 38.462 0.00 0.00 43.01 3.16
2382 2920 8.893727 GGCATGTCAACTATTTTAGACACTTAT 58.106 33.333 0.00 0.00 43.01 1.73
2395 2933 8.732746 TTTAGACACTTATATTGAGGAAAGCC 57.267 34.615 0.00 0.00 0.00 4.35
2397 2935 6.904626 AGACACTTATATTGAGGAAAGCCAT 58.095 36.000 0.00 0.00 36.29 4.40
2399 2937 8.494433 AGACACTTATATTGAGGAAAGCCATAA 58.506 33.333 0.00 0.00 36.29 1.90
2400 2938 9.120538 GACACTTATATTGAGGAAAGCCATAAA 57.879 33.333 0.00 0.00 36.29 1.40
2401 2939 9.474313 ACACTTATATTGAGGAAAGCCATAAAA 57.526 29.630 0.00 0.00 36.29 1.52
2406 2944 6.872585 ATTGAGGAAAGCCATAAAAATGGA 57.127 33.333 8.59 0.00 44.39 3.41
2408 2946 6.284891 TGAGGAAAGCCATAAAAATGGAAG 57.715 37.500 8.59 0.00 44.39 3.46
2409 2947 5.187576 TGAGGAAAGCCATAAAAATGGAAGG 59.812 40.000 8.59 0.00 44.39 3.46
2410 2948 4.471025 AGGAAAGCCATAAAAATGGAAGGG 59.529 41.667 8.59 0.00 44.39 3.95
2411 2949 4.469586 GGAAAGCCATAAAAATGGAAGGGA 59.530 41.667 8.59 0.00 44.39 4.20
2412 2950 5.045942 GGAAAGCCATAAAAATGGAAGGGAA 60.046 40.000 8.59 0.00 44.39 3.97
2414 2952 6.641161 AAGCCATAAAAATGGAAGGGAAAT 57.359 33.333 8.59 0.00 44.39 2.17
2415 2953 6.239217 AGCCATAAAAATGGAAGGGAAATC 57.761 37.500 8.59 0.00 44.39 2.17
2416 2954 5.725822 AGCCATAAAAATGGAAGGGAAATCA 59.274 36.000 8.59 0.00 44.39 2.57
2419 2957 6.408434 CCATAAAAATGGAAGGGAAATCAGGG 60.408 42.308 0.00 0.00 44.39 4.45
2420 2958 4.418395 AAAATGGAAGGGAAATCAGGGA 57.582 40.909 0.00 0.00 0.00 4.20
2421 2959 4.632105 AAATGGAAGGGAAATCAGGGAT 57.368 40.909 0.00 0.00 0.00 3.85
2422 2960 4.632105 AATGGAAGGGAAATCAGGGATT 57.368 40.909 0.00 0.00 33.25 3.01
2423 2961 3.386932 TGGAAGGGAAATCAGGGATTG 57.613 47.619 0.00 0.00 32.14 2.67
2425 2963 3.336391 TGGAAGGGAAATCAGGGATTGAA 59.664 43.478 0.00 0.00 39.77 2.69
2429 2967 5.059134 AGGGAAATCAGGGATTGAAGATC 57.941 43.478 0.00 0.00 39.77 2.75
2431 2969 5.195349 AGGGAAATCAGGGATTGAAGATCTT 59.805 40.000 7.95 7.95 39.77 2.40
2433 2971 6.382282 GGGAAATCAGGGATTGAAGATCTTTT 59.618 38.462 9.87 0.00 39.77 2.27
2434 2972 7.093156 GGGAAATCAGGGATTGAAGATCTTTTT 60.093 37.037 9.87 1.89 39.77 1.94
2435 2973 7.763071 GGAAATCAGGGATTGAAGATCTTTTTG 59.237 37.037 9.87 1.72 39.77 2.44
2439 2977 7.233632 TCAGGGATTGAAGATCTTTTTGAGAA 58.766 34.615 9.87 0.00 33.24 2.87
2440 2978 7.725397 TCAGGGATTGAAGATCTTTTTGAGAAA 59.275 33.333 9.87 0.00 33.24 2.52
2441 2979 7.811713 CAGGGATTGAAGATCTTTTTGAGAAAC 59.188 37.037 9.87 0.00 38.06 2.78
2442 2980 7.039434 AGGGATTGAAGATCTTTTTGAGAAACC 60.039 37.037 9.87 4.25 38.06 3.27
2445 2983 6.639632 TGAAGATCTTTTTGAGAAACCCAG 57.360 37.500 9.87 0.00 38.06 4.45
2448 2986 4.522022 AGATCTTTTTGAGAAACCCAGCTG 59.478 41.667 6.78 6.78 38.06 4.24
2466 3004 8.761689 ACCCAGCTGATATCAAATAAAAATTGT 58.238 29.630 17.39 0.00 0.00 2.71
2633 3195 3.514309 TCCTCGGGAAGTTAAGGAGAAAG 59.486 47.826 0.00 0.00 33.00 2.62
2640 3202 6.516693 CGGGAAGTTAAGGAGAAAGCAAAAAT 60.517 38.462 0.00 0.00 0.00 1.82
2647 3209 8.860128 GTTAAGGAGAAAGCAAAAATTATTCGG 58.140 33.333 0.00 0.00 0.00 4.30
2649 3211 7.410120 AGGAGAAAGCAAAAATTATTCGGAT 57.590 32.000 0.00 0.00 0.00 4.18
2701 3319 9.152595 AGAGTTATCGGAAAATTCAGTAACTTC 57.847 33.333 15.06 11.31 33.87 3.01
2711 3329 9.600646 GAAAATTCAGTAACTTCTCTTAACTGC 57.399 33.333 0.00 0.00 0.00 4.40
2721 3339 2.034939 TCTCTTAACTGCGGTTCAACGA 59.965 45.455 15.74 5.30 36.92 3.85
2723 3341 2.734606 TCTTAACTGCGGTTCAACGATG 59.265 45.455 15.74 0.00 36.92 3.84
2726 3344 2.281139 TGCGGTTCAACGATGCCA 60.281 55.556 0.00 0.00 35.47 4.92
2727 3345 2.175811 GCGGTTCAACGATGCCAC 59.824 61.111 0.00 0.00 35.47 5.01
2728 3346 2.612567 GCGGTTCAACGATGCCACA 61.613 57.895 0.00 0.00 35.47 4.17
2729 3347 1.497278 CGGTTCAACGATGCCACAG 59.503 57.895 0.00 0.00 35.47 3.66
2730 3348 0.948623 CGGTTCAACGATGCCACAGA 60.949 55.000 0.00 0.00 35.47 3.41
2731 3349 1.234821 GGTTCAACGATGCCACAGAA 58.765 50.000 0.00 0.00 0.00 3.02
2732 3350 1.606668 GGTTCAACGATGCCACAGAAA 59.393 47.619 0.00 0.00 0.00 2.52
2733 3351 2.034053 GGTTCAACGATGCCACAGAAAA 59.966 45.455 0.00 0.00 0.00 2.29
2734 3352 3.042887 GTTCAACGATGCCACAGAAAAC 58.957 45.455 0.00 0.00 0.00 2.43
2735 3353 1.606668 TCAACGATGCCACAGAAAACC 59.393 47.619 0.00 0.00 0.00 3.27
2736 3354 1.336440 CAACGATGCCACAGAAAACCA 59.664 47.619 0.00 0.00 0.00 3.67
2737 3355 1.686355 ACGATGCCACAGAAAACCAA 58.314 45.000 0.00 0.00 0.00 3.67
2738 3356 2.238521 ACGATGCCACAGAAAACCAAT 58.761 42.857 0.00 0.00 0.00 3.16
2739 3357 3.417101 ACGATGCCACAGAAAACCAATA 58.583 40.909 0.00 0.00 0.00 1.90
2740 3358 4.016444 ACGATGCCACAGAAAACCAATAT 58.984 39.130 0.00 0.00 0.00 1.28
2741 3359 4.142403 ACGATGCCACAGAAAACCAATATG 60.142 41.667 0.00 0.00 0.00 1.78
2742 3360 4.685924 GATGCCACAGAAAACCAATATGG 58.314 43.478 0.00 0.00 45.02 2.74
2743 3361 2.830923 TGCCACAGAAAACCAATATGGG 59.169 45.455 0.00 0.00 43.37 4.00
2744 3362 2.831526 GCCACAGAAAACCAATATGGGT 59.168 45.455 0.00 0.00 40.89 4.51
2745 3363 3.368323 GCCACAGAAAACCAATATGGGTG 60.368 47.826 1.34 0.00 35.52 4.61
2746 3364 3.831911 CCACAGAAAACCAATATGGGTGT 59.168 43.478 1.34 0.00 35.52 4.16
2747 3365 4.321899 CCACAGAAAACCAATATGGGTGTG 60.322 45.833 1.34 6.21 35.52 3.82
2748 3366 3.831911 ACAGAAAACCAATATGGGTGTGG 59.168 43.478 1.34 0.00 35.52 4.17
2750 3368 3.831911 AGAAAACCAATATGGGTGTGGTG 59.168 43.478 1.34 0.00 44.99 4.17
2751 3369 2.990740 AACCAATATGGGTGTGGTGT 57.009 45.000 1.34 0.00 44.99 4.16
2752 3370 2.214376 ACCAATATGGGTGTGGTGTG 57.786 50.000 0.00 0.00 44.05 3.82
2778 3423 4.890158 TGTGGCTTCTGATTCTGAACTA 57.110 40.909 2.19 0.00 0.00 2.24
2805 3451 6.207417 ACAAACATTCTAGACAAAGACCATGG 59.793 38.462 11.19 11.19 0.00 3.66
2925 3571 4.693532 TGGGACAGCGACAATGTC 57.306 55.556 2.75 2.75 45.12 3.06
2973 3619 2.032681 GAGAACAAGGGCGCCACT 59.967 61.111 30.85 20.16 0.00 4.00
3308 3957 4.248842 CAGTGACCACGGCCACCA 62.249 66.667 2.24 0.00 36.20 4.17
3309 3958 4.250305 AGTGACCACGGCCACCAC 62.250 66.667 2.24 2.62 36.20 4.16
3354 4003 2.872557 CACCACAAGCCGCATGAG 59.127 61.111 1.93 0.00 0.00 2.90
3429 4078 1.377333 GGTGAGTTGCCTACCTGCC 60.377 63.158 0.00 0.00 0.00 4.85
3462 4115 2.846918 GAGTGAACTCGCGTGTGC 59.153 61.111 15.31 13.78 32.78 4.57
3553 4207 4.057428 GCGTGGGACGAGCAGAGT 62.057 66.667 0.00 0.00 46.05 3.24
3555 4209 2.433318 GTGGGACGAGCAGAGTGC 60.433 66.667 0.00 0.00 45.46 4.40
3735 4389 2.305009 ACGCACCTACTACTCCATACC 58.695 52.381 0.00 0.00 0.00 2.73
3741 4395 2.621998 CCTACTACTCCATACCACACCG 59.378 54.545 0.00 0.00 0.00 4.94
3743 4397 0.821517 CTACTCCATACCACACCGCA 59.178 55.000 0.00 0.00 0.00 5.69
3745 4399 1.815421 CTCCATACCACACCGCAGC 60.815 63.158 0.00 0.00 0.00 5.25
3772 4430 1.802337 CTCCGTGTGTCCGTCCTGAA 61.802 60.000 0.00 0.00 0.00 3.02
3774 4432 1.663702 CGTGTGTCCGTCCTGAACC 60.664 63.158 0.00 0.00 0.00 3.62
3779 4437 1.212229 GTCCGTCCTGAACCGAGAC 59.788 63.158 0.00 0.00 0.00 3.36
3780 4438 1.228337 TCCGTCCTGAACCGAGACA 60.228 57.895 0.00 0.00 0.00 3.41
3791 4449 0.039437 ACCGAGACATGACGTGTGTC 60.039 55.000 18.29 18.29 45.13 3.67
3833 4491 0.770499 TGCTTGATCCCTCACACCAA 59.230 50.000 0.00 0.00 0.00 3.67
3888 4546 3.240069 CGACCTTGACCTTACTTACGTG 58.760 50.000 0.00 0.00 0.00 4.49
3889 4547 3.304928 CGACCTTGACCTTACTTACGTGT 60.305 47.826 0.00 0.00 0.00 4.49
3890 4548 3.985925 GACCTTGACCTTACTTACGTGTG 59.014 47.826 0.00 0.00 0.00 3.82
3891 4549 3.385755 ACCTTGACCTTACTTACGTGTGT 59.614 43.478 0.00 0.00 0.00 3.72
3962 4620 0.312416 CTCCGAGGCTGGTCTATTCG 59.688 60.000 0.00 0.00 0.00 3.34
3988 4646 4.727507 TCTCTTTCTTGCTCGCTCTTAT 57.272 40.909 0.00 0.00 0.00 1.73
3989 4647 4.428209 TCTCTTTCTTGCTCGCTCTTATG 58.572 43.478 0.00 0.00 0.00 1.90
4041 4699 0.318120 CCTTTGTACGTACGGTGGGT 59.682 55.000 21.06 0.00 0.00 4.51
4153 4818 4.856487 TCTTGTCTTCAACTTTGCGTTTTG 59.144 37.500 0.00 0.00 32.27 2.44
4163 4828 4.688021 ACTTTGCGTTTTGGCTTGATTAA 58.312 34.783 0.00 0.00 0.00 1.40
4173 4838 7.967854 CGTTTTGGCTTGATTAACATGATTCTA 59.032 33.333 0.00 0.00 0.00 2.10
4174 4839 9.807649 GTTTTGGCTTGATTAACATGATTCTAT 57.192 29.630 0.00 0.00 0.00 1.98
4176 4841 8.985315 TTGGCTTGATTAACATGATTCTATCT 57.015 30.769 0.00 0.00 0.00 1.98
4177 4842 8.613060 TGGCTTGATTAACATGATTCTATCTC 57.387 34.615 0.00 0.00 0.00 2.75
4178 4843 7.663081 TGGCTTGATTAACATGATTCTATCTCC 59.337 37.037 0.00 0.00 0.00 3.71
4179 4844 7.148507 GGCTTGATTAACATGATTCTATCTCCG 60.149 40.741 0.00 0.00 0.00 4.63
4180 4845 7.386299 GCTTGATTAACATGATTCTATCTCCGT 59.614 37.037 0.00 0.00 0.00 4.69
4181 4846 8.818141 TTGATTAACATGATTCTATCTCCGTC 57.182 34.615 0.00 0.00 0.00 4.79
4182 4847 8.183104 TGATTAACATGATTCTATCTCCGTCT 57.817 34.615 0.00 0.00 0.00 4.18
4183 4848 8.642432 TGATTAACATGATTCTATCTCCGTCTT 58.358 33.333 0.00 0.00 0.00 3.01
4184 4849 8.824159 ATTAACATGATTCTATCTCCGTCTTG 57.176 34.615 0.00 0.00 0.00 3.02
4185 4850 5.860941 ACATGATTCTATCTCCGTCTTGT 57.139 39.130 0.00 0.00 0.00 3.16
4186 4851 5.837437 ACATGATTCTATCTCCGTCTTGTC 58.163 41.667 0.00 0.00 0.00 3.18
4187 4852 5.596361 ACATGATTCTATCTCCGTCTTGTCT 59.404 40.000 0.00 0.00 0.00 3.41
4188 4853 6.097554 ACATGATTCTATCTCCGTCTTGTCTT 59.902 38.462 0.00 0.00 0.00 3.01
4189 4854 6.137794 TGATTCTATCTCCGTCTTGTCTTC 57.862 41.667 0.00 0.00 0.00 2.87
4190 4855 5.652452 TGATTCTATCTCCGTCTTGTCTTCA 59.348 40.000 0.00 0.00 0.00 3.02
4191 4856 5.977489 TTCTATCTCCGTCTTGTCTTCAA 57.023 39.130 0.00 0.00 0.00 2.69
4192 4857 5.312120 TCTATCTCCGTCTTGTCTTCAAC 57.688 43.478 0.00 0.00 0.00 3.18
4193 4858 5.010933 TCTATCTCCGTCTTGTCTTCAACT 58.989 41.667 0.00 0.00 0.00 3.16
4194 4859 4.608948 ATCTCCGTCTTGTCTTCAACTT 57.391 40.909 0.00 0.00 0.00 2.66
4195 4860 4.402056 TCTCCGTCTTGTCTTCAACTTT 57.598 40.909 0.00 0.00 0.00 2.66
4196 4861 4.119862 TCTCCGTCTTGTCTTCAACTTTG 58.880 43.478 0.00 0.00 0.00 2.77
4197 4862 2.612212 TCCGTCTTGTCTTCAACTTTGC 59.388 45.455 0.00 0.00 0.00 3.68
4198 4863 2.599848 CCGTCTTGTCTTCAACTTTGCG 60.600 50.000 0.00 0.00 0.00 4.85
4199 4864 2.030457 CGTCTTGTCTTCAACTTTGCGT 59.970 45.455 0.00 0.00 0.00 5.24
4200 4865 3.485216 CGTCTTGTCTTCAACTTTGCGTT 60.485 43.478 0.00 0.00 35.88 4.84
4201 4866 4.412207 GTCTTGTCTTCAACTTTGCGTTT 58.588 39.130 0.00 0.00 32.27 3.60
4202 4867 4.857037 GTCTTGTCTTCAACTTTGCGTTTT 59.143 37.500 0.00 0.00 32.27 2.43
4203 4868 4.856487 TCTTGTCTTCAACTTTGCGTTTTG 59.144 37.500 0.00 0.00 32.27 2.44
4204 4869 3.506810 TGTCTTCAACTTTGCGTTTTGG 58.493 40.909 0.00 0.00 32.27 3.28
4205 4870 2.281498 GTCTTCAACTTTGCGTTTTGGC 59.719 45.455 0.00 0.00 32.27 4.52
4206 4871 2.165437 TCTTCAACTTTGCGTTTTGGCT 59.835 40.909 0.00 0.00 32.27 4.75
4207 4872 2.663826 TCAACTTTGCGTTTTGGCTT 57.336 40.000 0.00 0.00 32.27 4.35
4208 4873 2.266554 TCAACTTTGCGTTTTGGCTTG 58.733 42.857 0.00 0.00 32.27 4.01
4209 4874 2.094494 TCAACTTTGCGTTTTGGCTTGA 60.094 40.909 0.00 0.00 32.27 3.02
4210 4875 2.865551 CAACTTTGCGTTTTGGCTTGAT 59.134 40.909 0.00 0.00 32.27 2.57
4211 4876 3.177997 ACTTTGCGTTTTGGCTTGATT 57.822 38.095 0.00 0.00 0.00 2.57
4212 4877 4.314740 ACTTTGCGTTTTGGCTTGATTA 57.685 36.364 0.00 0.00 0.00 1.75
4213 4878 4.688021 ACTTTGCGTTTTGGCTTGATTAA 58.312 34.783 0.00 0.00 0.00 1.40
4214 4879 4.506288 ACTTTGCGTTTTGGCTTGATTAAC 59.494 37.500 0.00 0.00 0.00 2.01
4215 4880 3.717400 TGCGTTTTGGCTTGATTAACA 57.283 38.095 0.00 0.00 0.00 2.41
4216 4881 4.250116 TGCGTTTTGGCTTGATTAACAT 57.750 36.364 0.00 0.00 0.00 2.71
4217 4882 3.986572 TGCGTTTTGGCTTGATTAACATG 59.013 39.130 0.00 0.00 0.00 3.21
4218 4883 4.233789 GCGTTTTGGCTTGATTAACATGA 58.766 39.130 0.00 0.00 0.00 3.07
4219 4884 4.864247 GCGTTTTGGCTTGATTAACATGAT 59.136 37.500 0.00 0.00 0.00 2.45
4220 4885 5.348451 GCGTTTTGGCTTGATTAACATGATT 59.652 36.000 0.00 0.00 0.00 2.57
4221 4886 6.454186 GCGTTTTGGCTTGATTAACATGATTC 60.454 38.462 0.00 0.00 0.00 2.52
4222 4887 6.808212 CGTTTTGGCTTGATTAACATGATTCT 59.192 34.615 0.00 0.00 0.00 2.40
4223 4888 7.201376 CGTTTTGGCTTGATTAACATGATTCTG 60.201 37.037 0.00 0.00 0.00 3.02
4224 4889 7.465353 TTTGGCTTGATTAACATGATTCTGA 57.535 32.000 0.00 0.00 0.00 3.27
4225 4890 7.649533 TTGGCTTGATTAACATGATTCTGAT 57.350 32.000 0.00 0.00 0.00 2.90
4226 4891 7.649533 TGGCTTGATTAACATGATTCTGATT 57.350 32.000 0.00 0.00 0.00 2.57
4227 4892 8.750515 TGGCTTGATTAACATGATTCTGATTA 57.249 30.769 0.00 0.00 0.00 1.75
4228 4893 9.187996 TGGCTTGATTAACATGATTCTGATTAA 57.812 29.630 0.00 0.00 0.00 1.40
4229 4894 9.455847 GGCTTGATTAACATGATTCTGATTAAC 57.544 33.333 0.00 0.00 0.00 2.01
4239 4904 9.950496 ACATGATTCTGATTAACATATACTCCC 57.050 33.333 0.00 0.00 0.00 4.30
4242 4907 9.159254 TGATTCTGATTAACATATACTCCCTGT 57.841 33.333 0.00 0.00 0.00 4.00
4245 4910 8.651589 TCTGATTAACATATACTCCCTGTAGG 57.348 38.462 0.00 0.00 34.24 3.18
4246 4911 8.453681 TCTGATTAACATATACTCCCTGTAGGA 58.546 37.037 0.00 0.00 44.91 2.94
4247 4912 9.090103 CTGATTAACATATACTCCCTGTAGGAA 57.910 37.037 0.00 0.00 46.94 3.36
4261 4926 7.541074 TCCCTGTAGGAATATGTATCCACTTA 58.459 38.462 0.00 0.00 43.78 2.24
4279 4944 6.064060 CCACTTATGGCCTTTATCTCATCAA 58.936 40.000 3.32 0.00 39.82 2.57
4290 4956 9.374838 GCCTTTATCTCATCAACATCAAAAATT 57.625 29.630 0.00 0.00 0.00 1.82
4314 4980 8.712285 TTGAATTTGAGTTACTATACCCTTCG 57.288 34.615 0.00 0.00 0.00 3.79
4319 4985 4.758674 TGAGTTACTATACCCTTCGATCCG 59.241 45.833 0.00 0.00 0.00 4.18
4345 5011 3.894759 AGCAAATGTCATAGCTCATGGT 58.105 40.909 6.83 0.00 35.16 3.55
4351 5017 2.846206 TGTCATAGCTCATGGTTCCCTT 59.154 45.455 0.00 0.00 35.16 3.95
4352 5018 3.118261 TGTCATAGCTCATGGTTCCCTTC 60.118 47.826 0.00 0.00 35.16 3.46
4386 5052 2.708051 CTCTCTCAAGAGCATTGCCAA 58.292 47.619 4.70 0.00 42.54 4.52
4387 5053 3.280295 CTCTCTCAAGAGCATTGCCAAT 58.720 45.455 4.70 0.00 42.54 3.16
4389 5055 3.014623 CTCTCAAGAGCATTGCCAATGA 58.985 45.455 21.24 6.38 40.64 2.57
4410 5076 9.063615 CAATGATCATATCTCAGATTGGAAACA 57.936 33.333 9.04 0.00 39.83 2.83
4431 5097 6.267496 ACAAAACAACTTAGTTTGCTCACT 57.733 33.333 0.00 0.00 40.60 3.41
4432 5098 6.092748 ACAAAACAACTTAGTTTGCTCACTG 58.907 36.000 0.00 0.00 40.60 3.66
4433 5099 3.971032 ACAACTTAGTTTGCTCACTGC 57.029 42.857 0.00 0.00 43.25 4.40
4446 5112 3.904571 GCTCACTGCAAATGACATTTCA 58.095 40.909 10.52 10.55 42.31 2.69
4471 5137 3.109619 CTCTTGCGCTAGCTAAGTACAC 58.890 50.000 20.94 1.41 45.42 2.90
4479 5145 1.735386 AGCTAAGTACACGAGCGAGA 58.265 50.000 0.00 0.00 41.23 4.04
4488 5154 3.503827 ACACGAGCGAGACAATTATCA 57.496 42.857 0.00 0.00 0.00 2.15
4491 5157 4.202060 ACACGAGCGAGACAATTATCAGAT 60.202 41.667 0.00 0.00 0.00 2.90
4520 5186 3.763360 TCAACCAATCTTTAGTGGCCATG 59.237 43.478 9.72 0.00 44.95 3.66
4558 5224 7.158021 AGCAATACACTAGAATCATAAGGAGC 58.842 38.462 0.00 0.00 0.00 4.70
4764 5432 7.007723 ACTTTGAGTGTGGTCCCAAATATTAA 58.992 34.615 0.00 0.00 0.00 1.40
4844 5513 4.016444 ACACATTTGTCGGCCTCATTAAT 58.984 39.130 0.00 0.00 0.00 1.40
4850 5519 8.349983 ACATTTGTCGGCCTCATTAATAATAAC 58.650 33.333 0.00 0.00 0.00 1.89
4909 5587 6.372381 GCAACCTACTTTTTCGATAAAGGGTA 59.628 38.462 25.54 13.74 39.02 3.69
4950 5628 8.757982 AAATGGAGCATCAAGAGTATACAAAT 57.242 30.769 5.50 0.00 36.25 2.32
5008 5686 1.228245 ACGCAGCCAACACCAAGAT 60.228 52.632 0.00 0.00 0.00 2.40
5023 5701 2.865551 CCAAGATGCACACACAAAAACC 59.134 45.455 0.00 0.00 0.00 3.27
5024 5702 3.430651 CCAAGATGCACACACAAAAACCT 60.431 43.478 0.00 0.00 0.00 3.50
5115 5795 0.525761 CCACCATTGGCAAACTACGG 59.474 55.000 3.01 2.77 35.56 4.02
5116 5796 0.109319 CACCATTGGCAAACTACGGC 60.109 55.000 3.01 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.245732 GGATGCAATCTCCAGCCATC 58.754 55.000 0.00 0.00 44.71 3.51
1 2 0.178970 GGGATGCAATCTCCAGCCAT 60.179 55.000 7.13 0.00 44.71 4.40
2 3 1.228228 GGGATGCAATCTCCAGCCA 59.772 57.895 7.13 0.00 44.71 4.75
3 4 0.178970 ATGGGATGCAATCTCCAGCC 60.179 55.000 7.13 0.00 45.67 4.85
4 5 0.959553 CATGGGATGCAATCTCCAGC 59.040 55.000 7.13 0.00 45.67 4.85
5 6 1.617322 CCATGGGATGCAATCTCCAG 58.383 55.000 2.85 0.00 45.67 3.86
6 7 0.468585 GCCATGGGATGCAATCTCCA 60.469 55.000 15.13 5.32 45.67 3.86
7 8 0.178970 AGCCATGGGATGCAATCTCC 60.179 55.000 15.13 0.00 45.67 3.71
8 9 0.959553 CAGCCATGGGATGCAATCTC 59.040 55.000 15.13 0.00 46.72 2.75
9 10 3.127099 CAGCCATGGGATGCAATCT 57.873 52.632 15.13 0.00 44.71 2.40
19 20 4.889112 ATCTGCCCGCAGCCATGG 62.889 66.667 7.63 7.63 43.31 3.66
20 21 3.285215 GATCTGCCCGCAGCCATG 61.285 66.667 11.92 0.00 43.31 3.66
21 22 4.923942 CGATCTGCCCGCAGCCAT 62.924 66.667 11.92 1.22 43.31 4.40
30 31 3.567550 CGAAAATTCGGCCGATCTGCC 62.568 57.143 31.56 17.61 46.30 4.85
31 32 0.316196 CGAAAATTCGGCCGATCTGC 60.316 55.000 31.56 16.25 46.30 4.26
32 33 3.806257 CGAAAATTCGGCCGATCTG 57.194 52.632 31.56 15.08 46.30 2.90
42 43 4.109693 TGCGCCGGCCGAAAATTC 62.110 61.111 30.73 9.72 40.02 2.17
43 44 4.413800 GTGCGCCGGCCGAAAATT 62.414 61.111 30.73 0.00 40.02 1.82
57 58 4.394712 ACTGCTAGGTGCCGGTGC 62.395 66.667 1.90 0.00 42.00 5.01
58 59 2.125512 GACTGCTAGGTGCCGGTG 60.126 66.667 1.90 0.00 42.00 4.94
59 60 3.760035 CGACTGCTAGGTGCCGGT 61.760 66.667 1.90 0.00 42.00 5.28
62 63 2.804828 AAAGGCGACTGCTAGGTGCC 62.805 60.000 0.00 10.68 42.68 5.01
63 64 0.108329 TAAAGGCGACTGCTAGGTGC 60.108 55.000 0.00 0.00 42.68 5.01
64 65 2.604046 ATAAAGGCGACTGCTAGGTG 57.396 50.000 0.00 0.00 42.68 4.00
65 66 3.629142 AAATAAAGGCGACTGCTAGGT 57.371 42.857 0.00 0.00 42.68 3.08
66 67 6.619801 AAATAAATAAAGGCGACTGCTAGG 57.380 37.500 0.00 0.00 42.68 3.02
100 101 3.345808 GCGGAAACAGCGCTGACA 61.346 61.111 42.03 0.00 0.00 3.58
143 144 1.445410 TTCCGATCGACTTGCGGTG 60.445 57.895 18.66 0.00 45.02 4.94
157 158 0.108992 TACTAGGCGTGCAAGTTCCG 60.109 55.000 0.59 0.00 0.00 4.30
158 159 1.641577 CTACTAGGCGTGCAAGTTCC 58.358 55.000 0.59 0.00 0.00 3.62
183 184 6.566564 CGTCAGATGTAGAAGTGCAACATTTT 60.567 38.462 2.64 0.00 41.43 1.82
244 245 1.392510 GCTGTTTCTTACGCGGTAAGG 59.607 52.381 12.47 4.55 43.79 2.69
282 283 8.203485 TGATGTGTCATGTATGTATGTGTGTAT 58.797 33.333 0.00 0.00 0.00 2.29
302 303 3.063045 CACGAATGATGTGGTCTGATGTG 59.937 47.826 0.00 0.00 33.69 3.21
320 325 1.067846 CGGATGAACTGACTTCCACGA 60.068 52.381 0.00 0.00 34.92 4.35
336 341 1.134098 CCAAGTTGCCACCTATCGGAT 60.134 52.381 0.00 0.00 0.00 4.18
341 346 0.035439 CGTCCCAAGTTGCCACCTAT 60.035 55.000 0.00 0.00 0.00 2.57
380 385 6.663953 TGTTTATACAGGCTAGGCTAGGATAG 59.336 42.308 19.78 8.01 43.09 2.08
381 386 6.558498 TGTTTATACAGGCTAGGCTAGGATA 58.442 40.000 19.78 15.72 0.00 2.59
382 387 5.403512 TGTTTATACAGGCTAGGCTAGGAT 58.596 41.667 19.78 16.67 0.00 3.24
383 388 4.811498 TGTTTATACAGGCTAGGCTAGGA 58.189 43.478 19.78 10.61 0.00 2.94
384 389 5.542779 CTTGTTTATACAGGCTAGGCTAGG 58.457 45.833 19.78 10.32 35.28 3.02
419 425 4.148825 ACTGGCGCCTCATCGGTC 62.149 66.667 29.70 0.00 34.25 4.79
535 541 0.517316 GCCTTCTAATATTGGCCGCG 59.483 55.000 0.00 0.00 39.49 6.46
543 549 8.633561 GCTTAAATTTGACAGGCCTTCTAATAT 58.366 33.333 0.00 2.72 0.00 1.28
623 630 1.827789 CCGCAGAGAGGAGGGAGAG 60.828 68.421 0.00 0.00 0.00 3.20
664 671 2.043852 TCTCCGCCCCTGTCTCTC 60.044 66.667 0.00 0.00 0.00 3.20
727 740 1.500512 CCGAGGAGGAGTCGATCGAC 61.501 65.000 35.26 35.26 45.00 4.20
766 779 4.179599 GGGAGGGGAGGGGAGGAG 62.180 77.778 0.00 0.00 0.00 3.69
769 782 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
774 787 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
796 809 1.359459 GACGAACGGACATGGAAGCC 61.359 60.000 0.00 0.00 0.00 4.35
808 821 2.021793 CATGCATGCGGACGAACG 59.978 61.111 14.93 0.00 0.00 3.95
809 822 1.439353 ATCCATGCATGCGGACGAAC 61.439 55.000 21.69 0.00 33.05 3.95
810 823 1.153188 ATCCATGCATGCGGACGAA 60.153 52.632 21.69 0.00 33.05 3.85
811 824 1.888638 CATCCATGCATGCGGACGA 60.889 57.895 21.69 12.74 33.05 4.20
888 901 0.474184 ATGGGGATCGGATCAACCAC 59.526 55.000 26.06 11.44 39.56 4.16
890 903 0.764890 TGATGGGGATCGGATCAACC 59.235 55.000 18.99 18.79 0.00 3.77
891 904 2.638480 TTGATGGGGATCGGATCAAC 57.362 50.000 18.99 11.36 32.44 3.18
892 905 3.489355 CATTTGATGGGGATCGGATCAA 58.511 45.455 18.99 3.06 34.94 2.57
895 908 1.883638 CGCATTTGATGGGGATCGGAT 60.884 52.381 0.00 0.00 39.31 4.18
897 910 0.534877 TCGCATTTGATGGGGATCGG 60.535 55.000 5.34 0.00 42.79 4.18
898 911 0.870393 CTCGCATTTGATGGGGATCG 59.130 55.000 5.34 0.00 42.79 3.69
972 985 4.502282 GCTGAAGAGTTGTAGACATGATCG 59.498 45.833 0.00 0.00 0.00 3.69
984 997 0.868406 GGGTTGACGCTGAAGAGTTG 59.132 55.000 0.00 0.00 0.00 3.16
994 1007 1.083489 TCGATGATTTGGGTTGACGC 58.917 50.000 0.00 0.00 0.00 5.19
1030 1043 2.478894 GCTTCCATTTCGACGAAACAGA 59.521 45.455 24.21 19.62 34.23 3.41
1032 1045 2.489971 AGCTTCCATTTCGACGAAACA 58.510 42.857 24.21 9.43 34.23 2.83
1059 1072 1.007387 GCAGTTGCAACTTTCCCCG 60.007 57.895 29.23 17.47 41.59 5.73
1082 1095 4.854173 TCCTTCTATGCTGTATTTTGCCA 58.146 39.130 0.00 0.00 0.00 4.92
1148 1161 8.467598 AGTAGTAGGTATAATATGCACAATCGG 58.532 37.037 0.00 0.00 0.00 4.18
1149 1162 9.290483 CAGTAGTAGGTATAATATGCACAATCG 57.710 37.037 0.00 0.00 0.00 3.34
1164 1177 9.956720 GCGAAATTTAATCTACAGTAGTAGGTA 57.043 33.333 7.50 0.00 46.23 3.08
1165 1178 7.924947 GGCGAAATTTAATCTACAGTAGTAGGT 59.075 37.037 7.50 0.00 46.23 3.08
1166 1179 8.142551 AGGCGAAATTTAATCTACAGTAGTAGG 58.857 37.037 7.50 0.00 46.23 3.18
1170 1183 6.984474 TCCAGGCGAAATTTAATCTACAGTAG 59.016 38.462 0.47 0.47 0.00 2.57
1182 1195 2.524306 TGGTTCATCCAGGCGAAATTT 58.476 42.857 0.00 0.00 41.93 1.82
1228 1241 3.067461 GCCCTGATACAGAGTACAGACTG 59.933 52.174 0.00 0.00 35.45 3.51
1237 1250 1.412079 AGCAGAGCCCTGATACAGAG 58.588 55.000 0.00 0.00 43.02 3.35
1238 1251 1.871418 AAGCAGAGCCCTGATACAGA 58.129 50.000 0.00 0.00 43.02 3.41
1239 1252 2.093288 TGAAAGCAGAGCCCTGATACAG 60.093 50.000 0.00 0.00 43.02 2.74
1240 1253 1.908619 TGAAAGCAGAGCCCTGATACA 59.091 47.619 0.00 0.00 43.02 2.29
1241 1254 2.559440 CTGAAAGCAGAGCCCTGATAC 58.441 52.381 0.00 0.00 45.17 2.24
1242 1255 1.487976 CCTGAAAGCAGAGCCCTGATA 59.512 52.381 0.00 0.00 45.17 2.15
1243 1256 0.255318 CCTGAAAGCAGAGCCCTGAT 59.745 55.000 0.00 0.00 45.17 2.90
1244 1257 0.837691 TCCTGAAAGCAGAGCCCTGA 60.838 55.000 0.00 0.00 45.17 3.86
1328 1341 2.379634 CGGCTGTCATCGTGCGAAA 61.380 57.895 0.00 0.00 0.00 3.46
1339 1352 4.760047 ATGGTCACGGCGGCTGTC 62.760 66.667 12.39 1.40 0.00 3.51
1403 1416 1.270358 GCTGATCGACACCCTAATCCC 60.270 57.143 0.00 0.00 0.00 3.85
1404 1417 1.689273 AGCTGATCGACACCCTAATCC 59.311 52.381 0.00 0.00 0.00 3.01
1429 1442 5.064558 TGGAACAAACGACCAGCTAATTAA 58.935 37.500 0.00 0.00 31.92 1.40
1448 1461 4.133526 TGGGGGTTCATGTTTATTGGAA 57.866 40.909 0.00 0.00 0.00 3.53
1461 1474 0.541764 TCCAACAGCAATGGGGGTTC 60.542 55.000 3.04 0.00 38.54 3.62
1535 1574 3.105937 GTGTCTCAGCAAAACCGTTTTC 58.894 45.455 6.26 2.88 0.00 2.29
1550 1589 4.162096 ACAACACATCTAGACGTGTCTC 57.838 45.455 23.56 0.00 45.37 3.36
1568 1607 9.317827 GGGGACTTAGATATACAATACCTACAA 57.682 37.037 0.00 0.00 0.00 2.41
1570 1609 8.968969 CAGGGGACTTAGATATACAATACCTAC 58.031 40.741 0.00 0.00 40.21 3.18
1573 1612 7.453752 TGACAGGGGACTTAGATATACAATACC 59.546 40.741 0.00 0.00 40.21 2.73
1610 1672 7.945134 GGTAAAATACCTGCATGAATCTTCAT 58.055 34.615 0.00 0.00 45.57 2.57
1687 2217 4.352001 AGGCAGGTGACATAACATATCCAT 59.648 41.667 0.00 0.00 0.00 3.41
1707 2237 1.467920 ACATTGCAGGCTTTCTAGGC 58.532 50.000 0.00 0.00 46.82 3.93
1708 2238 2.821969 ACAACATTGCAGGCTTTCTAGG 59.178 45.455 0.00 0.00 0.00 3.02
1712 2242 3.456280 TCAAACAACATTGCAGGCTTTC 58.544 40.909 0.00 0.00 0.00 2.62
1719 2249 7.064371 GGCATAAACATATCAAACAACATTGCA 59.936 33.333 0.00 0.00 0.00 4.08
1813 2343 1.547901 GGGAGCAGGGTAGCACTTTTT 60.548 52.381 0.00 0.00 36.85 1.94
1814 2344 0.038310 GGGAGCAGGGTAGCACTTTT 59.962 55.000 0.00 0.00 36.85 2.27
1845 2375 4.523083 GATTTTACTGTCCATGGCAGGTA 58.477 43.478 28.43 18.28 38.22 3.08
1887 2418 8.437742 CCAATGTTTGATGCAAAAAGATAGAAC 58.562 33.333 7.90 0.00 35.03 3.01
1894 2425 5.505985 CCCAACCAATGTTTGATGCAAAAAG 60.506 40.000 0.00 0.00 35.03 2.27
1916 2448 1.031571 TTGCATGCAGATCGAACCCC 61.032 55.000 21.50 0.00 0.00 4.95
1918 2450 2.857592 ATTTGCATGCAGATCGAACC 57.142 45.000 21.50 0.00 0.00 3.62
1923 2455 6.715344 TTCAAGAAAATTTGCATGCAGATC 57.285 33.333 22.62 12.41 0.00 2.75
1925 2457 5.236911 GGTTTCAAGAAAATTTGCATGCAGA 59.763 36.000 21.50 17.73 31.33 4.26
1953 2485 7.012232 TGGCATTCCTTCAAGAAATTTGTTTTC 59.988 33.333 0.00 0.00 43.45 2.29
1977 2509 4.677584 TTCTTTTGAACAACCACGAATGG 58.322 39.130 0.00 0.00 41.96 3.16
2003 2535 1.334960 CGCGAGCATTGGTCTTGTTTT 60.335 47.619 13.52 0.00 0.00 2.43
2007 2539 1.091771 ATCCGCGAGCATTGGTCTTG 61.092 55.000 8.23 5.89 0.00 3.02
2008 2540 1.091771 CATCCGCGAGCATTGGTCTT 61.092 55.000 8.23 0.00 0.00 3.01
2009 2541 1.522355 CATCCGCGAGCATTGGTCT 60.522 57.895 8.23 0.00 0.00 3.85
2010 2542 1.369091 AACATCCGCGAGCATTGGTC 61.369 55.000 8.23 5.77 0.00 4.02
2022 2554 7.170658 TCAAAAAGGCTATTTTCAAAACATCCG 59.829 33.333 0.00 0.00 30.31 4.18
2054 2586 7.490840 TGTCTTCTGAATGAAAAGCAAAATCA 58.509 30.769 0.00 0.00 33.79 2.57
2072 2604 9.741647 GAGAAGAAAAATCATTTGTTGTCTTCT 57.258 29.630 19.12 19.12 44.21 2.85
2073 2605 8.685536 CGAGAAGAAAAATCATTTGTTGTCTTC 58.314 33.333 13.38 13.38 38.14 2.87
2074 2606 8.405531 TCGAGAAGAAAAATCATTTGTTGTCTT 58.594 29.630 6.45 0.00 29.07 3.01
2077 2609 8.925161 TTTCGAGAAGAAAAATCATTTGTTGT 57.075 26.923 0.00 0.00 45.05 3.32
2097 2630 5.494632 TCTATCTACGTGCAGATTTTCGA 57.505 39.130 6.17 0.00 36.63 3.71
2098 2631 5.515270 TGTTCTATCTACGTGCAGATTTTCG 59.485 40.000 6.17 0.00 36.63 3.46
2105 2638 5.576774 TGTTGAATGTTCTATCTACGTGCAG 59.423 40.000 0.00 0.00 0.00 4.41
2231 2769 5.779241 AAAGGGACACAAGAATATCTGGA 57.221 39.130 0.00 0.00 0.00 3.86
2232 2770 7.112779 ACTTAAAGGGACACAAGAATATCTGG 58.887 38.462 0.00 0.00 0.00 3.86
2233 2771 8.567285 AACTTAAAGGGACACAAGAATATCTG 57.433 34.615 0.00 0.00 0.00 2.90
2234 2772 9.014297 CAAACTTAAAGGGACACAAGAATATCT 57.986 33.333 0.00 0.00 0.00 1.98
2235 2773 9.010029 TCAAACTTAAAGGGACACAAGAATATC 57.990 33.333 0.00 0.00 0.00 1.63
2236 2774 8.793592 GTCAAACTTAAAGGGACACAAGAATAT 58.206 33.333 0.00 0.00 0.00 1.28
2238 2776 6.605594 TGTCAAACTTAAAGGGACACAAGAAT 59.394 34.615 0.00 0.00 33.88 2.40
2239 2777 5.946972 TGTCAAACTTAAAGGGACACAAGAA 59.053 36.000 0.00 0.00 33.88 2.52
2240 2778 5.502079 TGTCAAACTTAAAGGGACACAAGA 58.498 37.500 0.00 0.00 33.88 3.02
2241 2779 5.828299 TGTCAAACTTAAAGGGACACAAG 57.172 39.130 0.00 0.00 33.88 3.16
2242 2780 5.105675 GGTTGTCAAACTTAAAGGGACACAA 60.106 40.000 0.00 0.00 38.13 3.33
2243 2781 4.399934 GGTTGTCAAACTTAAAGGGACACA 59.600 41.667 0.00 0.00 38.13 3.72
2245 2783 3.955551 GGGTTGTCAAACTTAAAGGGACA 59.044 43.478 0.00 0.00 36.48 4.02
2246 2784 4.212716 AGGGTTGTCAAACTTAAAGGGAC 58.787 43.478 0.00 0.00 36.48 4.46
2247 2785 4.167307 AGAGGGTTGTCAAACTTAAAGGGA 59.833 41.667 0.00 0.00 36.48 4.20
2249 2787 9.462606 AATATAGAGGGTTGTCAAACTTAAAGG 57.537 33.333 0.00 0.00 36.48 3.11
2252 2790 9.158233 CGAAATATAGAGGGTTGTCAAACTTAA 57.842 33.333 0.00 0.00 36.48 1.85
2254 2792 6.093633 GCGAAATATAGAGGGTTGTCAAACTT 59.906 38.462 0.00 0.00 36.48 2.66
2255 2793 5.585047 GCGAAATATAGAGGGTTGTCAAACT 59.415 40.000 0.00 0.00 36.48 2.66
2256 2794 5.585047 AGCGAAATATAGAGGGTTGTCAAAC 59.415 40.000 0.00 0.00 35.40 2.93
2258 2796 5.353394 AGCGAAATATAGAGGGTTGTCAA 57.647 39.130 0.00 0.00 0.00 3.18
2260 2798 5.357257 TGAAGCGAAATATAGAGGGTTGTC 58.643 41.667 0.00 0.00 0.00 3.18
2261 2799 5.353394 TGAAGCGAAATATAGAGGGTTGT 57.647 39.130 0.00 0.00 0.00 3.32
2264 2802 6.042093 TGAGAATGAAGCGAAATATAGAGGGT 59.958 38.462 0.00 0.00 0.00 4.34
2265 2803 6.367422 GTGAGAATGAAGCGAAATATAGAGGG 59.633 42.308 0.00 0.00 0.00 4.30
2266 2804 7.151308 AGTGAGAATGAAGCGAAATATAGAGG 58.849 38.462 0.00 0.00 0.00 3.69
2271 2809 8.125448 GCTTTTAGTGAGAATGAAGCGAAATAT 58.875 33.333 0.00 0.00 0.00 1.28
2272 2810 7.119116 TGCTTTTAGTGAGAATGAAGCGAAATA 59.881 33.333 0.00 0.00 35.00 1.40
2273 2811 6.072508 TGCTTTTAGTGAGAATGAAGCGAAAT 60.073 34.615 0.00 0.00 35.00 2.17
2274 2812 5.238432 TGCTTTTAGTGAGAATGAAGCGAAA 59.762 36.000 0.00 0.00 35.00 3.46
2276 2814 4.314961 TGCTTTTAGTGAGAATGAAGCGA 58.685 39.130 0.00 0.00 35.00 4.93
2277 2815 4.153117 ACTGCTTTTAGTGAGAATGAAGCG 59.847 41.667 0.00 0.00 35.00 4.68
2278 2816 5.619625 ACTGCTTTTAGTGAGAATGAAGC 57.380 39.130 0.00 0.00 0.00 3.86
2279 2817 8.131100 TCAAAACTGCTTTTAGTGAGAATGAAG 58.869 33.333 0.00 0.00 0.00 3.02
2281 2819 7.066887 TGTCAAAACTGCTTTTAGTGAGAATGA 59.933 33.333 0.00 0.00 0.00 2.57
2283 2821 7.333528 TGTCAAAACTGCTTTTAGTGAGAAT 57.666 32.000 0.00 0.00 0.00 2.40
2287 2825 5.393678 GGGTTGTCAAAACTGCTTTTAGTGA 60.394 40.000 0.00 0.00 0.00 3.41
2288 2826 4.803613 GGGTTGTCAAAACTGCTTTTAGTG 59.196 41.667 0.00 0.00 0.00 2.74
2289 2827 4.709886 AGGGTTGTCAAAACTGCTTTTAGT 59.290 37.500 0.00 0.00 0.00 2.24
2290 2828 5.067805 AGAGGGTTGTCAAAACTGCTTTTAG 59.932 40.000 0.00 0.00 0.00 1.85
2292 2830 3.769300 AGAGGGTTGTCAAAACTGCTTTT 59.231 39.130 0.00 0.00 0.00 2.27
2293 2831 3.365472 AGAGGGTTGTCAAAACTGCTTT 58.635 40.909 0.00 0.00 0.00 3.51
2295 2833 2.736670 AGAGGGTTGTCAAAACTGCT 57.263 45.000 0.00 0.00 0.00 4.24
2297 2835 8.576442 ACAAAATATAGAGGGTTGTCAAAACTG 58.424 33.333 0.00 0.00 0.00 3.16
2298 2836 8.706322 ACAAAATATAGAGGGTTGTCAAAACT 57.294 30.769 0.00 0.00 0.00 2.66
2299 2837 8.793592 AGACAAAATATAGAGGGTTGTCAAAAC 58.206 33.333 15.04 0.00 46.71 2.43
2334 2872 4.201841 CCGTCGTCAAAACTGGTTTTAGTT 60.202 41.667 10.52 0.00 40.45 2.24
2335 2873 3.310501 CCGTCGTCAAAACTGGTTTTAGT 59.689 43.478 10.52 0.00 40.45 2.24
2336 2874 3.847105 GCCGTCGTCAAAACTGGTTTTAG 60.847 47.826 10.52 6.54 40.45 1.85
2339 2877 0.379316 GCCGTCGTCAAAACTGGTTT 59.621 50.000 0.00 0.00 0.00 3.27
2342 2880 0.110238 CATGCCGTCGTCAAAACTGG 60.110 55.000 0.00 0.00 0.00 4.00
2343 2881 0.586319 ACATGCCGTCGTCAAAACTG 59.414 50.000 0.00 0.00 0.00 3.16
2344 2882 0.865769 GACATGCCGTCGTCAAAACT 59.134 50.000 0.00 0.00 34.19 2.66
2345 2883 3.361443 GACATGCCGTCGTCAAAAC 57.639 52.632 0.00 0.00 34.19 2.43
2353 2891 5.350365 TGTCTAAAATAGTTGACATGCCGTC 59.650 40.000 0.00 0.00 45.61 4.79
2354 2892 5.121768 GTGTCTAAAATAGTTGACATGCCGT 59.878 40.000 0.00 0.00 40.78 5.68
2356 2894 6.743575 AGTGTCTAAAATAGTTGACATGCC 57.256 37.500 0.00 0.00 40.78 4.40
2369 2907 9.174166 GGCTTTCCTCAATATAAGTGTCTAAAA 57.826 33.333 0.00 0.00 0.00 1.52
2370 2908 8.325787 TGGCTTTCCTCAATATAAGTGTCTAAA 58.674 33.333 0.00 0.00 0.00 1.85
2373 2911 6.313519 TGGCTTTCCTCAATATAAGTGTCT 57.686 37.500 0.00 0.00 0.00 3.41
2374 2912 8.677148 TTATGGCTTTCCTCAATATAAGTGTC 57.323 34.615 0.00 0.00 0.00 3.67
2380 2918 9.653516 TCCATTTTTATGGCTTTCCTCAATATA 57.346 29.630 0.00 0.00 41.43 0.86
2382 2920 7.969690 TCCATTTTTATGGCTTTCCTCAATA 57.030 32.000 0.00 0.00 41.43 1.90
2383 2921 6.872585 TCCATTTTTATGGCTTTCCTCAAT 57.127 33.333 0.00 0.00 41.43 2.57
2384 2922 6.295802 CCTTCCATTTTTATGGCTTTCCTCAA 60.296 38.462 0.00 0.00 41.43 3.02
2385 2923 5.187576 CCTTCCATTTTTATGGCTTTCCTCA 59.812 40.000 0.00 0.00 41.43 3.86
2386 2924 5.395657 CCCTTCCATTTTTATGGCTTTCCTC 60.396 44.000 0.00 0.00 41.43 3.71
2387 2925 4.471025 CCCTTCCATTTTTATGGCTTTCCT 59.529 41.667 0.00 0.00 41.43 3.36
2388 2926 4.469586 TCCCTTCCATTTTTATGGCTTTCC 59.530 41.667 0.00 0.00 41.43 3.13
2389 2927 5.675684 TCCCTTCCATTTTTATGGCTTTC 57.324 39.130 0.00 0.00 41.43 2.62
2393 2931 5.988287 TGATTTCCCTTCCATTTTTATGGC 58.012 37.500 0.00 0.00 41.43 4.40
2394 2932 6.408434 CCCTGATTTCCCTTCCATTTTTATGG 60.408 42.308 0.00 0.00 43.01 2.74
2395 2933 6.383726 TCCCTGATTTCCCTTCCATTTTTATG 59.616 38.462 0.00 0.00 0.00 1.90
2397 2935 5.909760 TCCCTGATTTCCCTTCCATTTTTA 58.090 37.500 0.00 0.00 0.00 1.52
2399 2937 4.418395 TCCCTGATTTCCCTTCCATTTT 57.582 40.909 0.00 0.00 0.00 1.82
2400 2938 4.632105 ATCCCTGATTTCCCTTCCATTT 57.368 40.909 0.00 0.00 0.00 2.32
2401 2939 4.016292 TCAATCCCTGATTTCCCTTCCATT 60.016 41.667 0.00 0.00 28.87 3.16
2402 2940 3.533068 TCAATCCCTGATTTCCCTTCCAT 59.467 43.478 0.00 0.00 28.87 3.41
2405 2943 4.860022 TCTTCAATCCCTGATTTCCCTTC 58.140 43.478 0.00 0.00 32.78 3.46
2406 2944 4.953781 TCTTCAATCCCTGATTTCCCTT 57.046 40.909 0.00 0.00 32.78 3.95
2408 2946 5.059134 AGATCTTCAATCCCTGATTTCCC 57.941 43.478 0.00 0.00 32.78 3.97
2409 2947 7.415592 AAAAGATCTTCAATCCCTGATTTCC 57.584 36.000 8.78 0.00 32.78 3.13
2410 2948 8.526147 TCAAAAAGATCTTCAATCCCTGATTTC 58.474 33.333 8.78 0.00 32.78 2.17
2411 2949 8.426569 TCAAAAAGATCTTCAATCCCTGATTT 57.573 30.769 8.78 0.00 32.78 2.17
2412 2950 7.892241 TCTCAAAAAGATCTTCAATCCCTGATT 59.108 33.333 8.78 0.00 32.78 2.57
2414 2952 6.782986 TCTCAAAAAGATCTTCAATCCCTGA 58.217 36.000 8.78 3.72 0.00 3.86
2415 2953 7.458409 TTCTCAAAAAGATCTTCAATCCCTG 57.542 36.000 8.78 0.00 32.82 4.45
2416 2954 7.039434 GGTTTCTCAAAAAGATCTTCAATCCCT 60.039 37.037 8.78 0.00 32.82 4.20
2419 2957 7.661040 TGGGTTTCTCAAAAAGATCTTCAATC 58.339 34.615 8.78 0.00 32.82 2.67
2420 2958 7.601705 TGGGTTTCTCAAAAAGATCTTCAAT 57.398 32.000 8.78 0.00 32.82 2.57
2421 2959 6.461509 GCTGGGTTTCTCAAAAAGATCTTCAA 60.462 38.462 8.78 0.00 32.82 2.69
2422 2960 5.010012 GCTGGGTTTCTCAAAAAGATCTTCA 59.990 40.000 8.78 0.00 32.82 3.02
2423 2961 5.242615 AGCTGGGTTTCTCAAAAAGATCTTC 59.757 40.000 8.78 0.00 32.82 2.87
2425 2963 4.522022 CAGCTGGGTTTCTCAAAAAGATCT 59.478 41.667 5.57 0.00 32.82 2.75
2429 2967 4.861102 ATCAGCTGGGTTTCTCAAAAAG 57.139 40.909 15.13 0.00 0.00 2.27
2431 2969 5.569355 TGATATCAGCTGGGTTTCTCAAAA 58.431 37.500 15.13 0.00 0.00 2.44
2433 2971 4.842531 TGATATCAGCTGGGTTTCTCAA 57.157 40.909 15.13 0.00 0.00 3.02
2434 2972 4.842531 TTGATATCAGCTGGGTTTCTCA 57.157 40.909 15.13 6.10 0.00 3.27
2435 2973 7.807977 TTATTTGATATCAGCTGGGTTTCTC 57.192 36.000 15.13 3.56 0.00 2.87
2439 2977 9.603921 CAATTTTTATTTGATATCAGCTGGGTT 57.396 29.630 15.13 1.77 0.00 4.11
2440 2978 8.761689 ACAATTTTTATTTGATATCAGCTGGGT 58.238 29.630 15.13 5.80 0.00 4.51
2537 3079 9.723601 TTTCCTTTGATTTTTCATCCCTAATTG 57.276 29.630 0.00 0.00 0.00 2.32
2582 3125 9.990360 TTATTTGTGTTTCCCCTATTTTTCTTC 57.010 29.630 0.00 0.00 0.00 2.87
2587 3130 9.733556 GGAAATTATTTGTGTTTCCCCTATTTT 57.266 29.630 0.00 0.00 43.13 1.82
2596 3139 6.262193 TCCCGAGGAAATTATTTGTGTTTC 57.738 37.500 0.00 0.00 0.00 2.78
2612 3155 3.863041 CTTTCTCCTTAACTTCCCGAGG 58.137 50.000 0.00 0.00 0.00 4.63
2617 3179 9.929180 ATAATTTTTGCTTTCTCCTTAACTTCC 57.071 29.630 0.00 0.00 0.00 3.46
2676 3264 9.152595 AGAAGTTACTGAATTTTCCGATAACTC 57.847 33.333 9.52 6.07 31.83 3.01
2677 3265 9.152595 GAGAAGTTACTGAATTTTCCGATAACT 57.847 33.333 0.00 0.00 33.86 2.24
2678 3266 9.152595 AGAGAAGTTACTGAATTTTCCGATAAC 57.847 33.333 0.00 0.00 0.00 1.89
2683 3271 8.989980 AGTTAAGAGAAGTTACTGAATTTTCCG 58.010 33.333 0.00 0.00 0.00 4.30
2688 3276 6.369065 CCGCAGTTAAGAGAAGTTACTGAATT 59.631 38.462 0.00 0.00 0.00 2.17
2701 3319 2.400399 TCGTTGAACCGCAGTTAAGAG 58.600 47.619 0.00 0.00 35.94 2.85
2711 3329 0.948623 TCTGTGGCATCGTTGAACCG 60.949 55.000 0.00 0.00 0.00 4.44
2721 3339 3.451902 CCCATATTGGTTTTCTGTGGCAT 59.548 43.478 0.00 0.00 35.17 4.40
2723 3341 2.831526 ACCCATATTGGTTTTCTGTGGC 59.168 45.455 0.00 0.00 33.91 5.01
2726 3344 3.831911 CCACACCCATATTGGTTTTCTGT 59.168 43.478 0.00 0.00 36.12 3.41
2727 3345 3.831911 ACCACACCCATATTGGTTTTCTG 59.168 43.478 0.00 0.00 40.98 3.02
2728 3346 3.831911 CACCACACCCATATTGGTTTTCT 59.168 43.478 0.00 0.00 41.93 2.52
2729 3347 3.576550 ACACCACACCCATATTGGTTTTC 59.423 43.478 0.00 0.00 41.93 2.29
2730 3348 3.323403 CACACCACACCCATATTGGTTTT 59.677 43.478 0.00 0.00 41.93 2.43
2731 3349 2.896685 CACACCACACCCATATTGGTTT 59.103 45.455 0.00 0.00 41.93 3.27
2732 3350 2.109128 TCACACCACACCCATATTGGTT 59.891 45.455 0.00 0.00 41.93 3.67
2733 3351 1.707989 TCACACCACACCCATATTGGT 59.292 47.619 0.00 0.00 44.83 3.67
2734 3352 2.505650 TCACACCACACCCATATTGG 57.494 50.000 0.00 0.00 37.25 3.16
2735 3353 5.170021 CAAAATCACACCACACCCATATTG 58.830 41.667 0.00 0.00 0.00 1.90
2736 3354 4.837860 ACAAAATCACACCACACCCATATT 59.162 37.500 0.00 0.00 0.00 1.28
2737 3355 4.220382 CACAAAATCACACCACACCCATAT 59.780 41.667 0.00 0.00 0.00 1.78
2738 3356 3.571828 CACAAAATCACACCACACCCATA 59.428 43.478 0.00 0.00 0.00 2.74
2739 3357 2.364970 CACAAAATCACACCACACCCAT 59.635 45.455 0.00 0.00 0.00 4.00
2740 3358 1.753649 CACAAAATCACACCACACCCA 59.246 47.619 0.00 0.00 0.00 4.51
2741 3359 1.068434 CCACAAAATCACACCACACCC 59.932 52.381 0.00 0.00 0.00 4.61
2742 3360 1.537990 GCCACAAAATCACACCACACC 60.538 52.381 0.00 0.00 0.00 4.16
2743 3361 1.408702 AGCCACAAAATCACACCACAC 59.591 47.619 0.00 0.00 0.00 3.82
2744 3362 1.774110 AGCCACAAAATCACACCACA 58.226 45.000 0.00 0.00 0.00 4.17
2745 3363 2.362077 AGAAGCCACAAAATCACACCAC 59.638 45.455 0.00 0.00 0.00 4.16
2746 3364 2.361757 CAGAAGCCACAAAATCACACCA 59.638 45.455 0.00 0.00 0.00 4.17
2747 3365 2.622942 TCAGAAGCCACAAAATCACACC 59.377 45.455 0.00 0.00 0.00 4.16
2748 3366 3.988379 TCAGAAGCCACAAAATCACAC 57.012 42.857 0.00 0.00 0.00 3.82
2749 3367 4.828939 AGAATCAGAAGCCACAAAATCACA 59.171 37.500 0.00 0.00 0.00 3.58
2750 3368 5.048504 TCAGAATCAGAAGCCACAAAATCAC 60.049 40.000 0.00 0.00 0.00 3.06
2751 3369 5.072055 TCAGAATCAGAAGCCACAAAATCA 58.928 37.500 0.00 0.00 0.00 2.57
2752 3370 5.633830 TCAGAATCAGAAGCCACAAAATC 57.366 39.130 0.00 0.00 0.00 2.17
2778 3423 8.950210 CATGGTCTTTGTCTAGAATGTTTGTAT 58.050 33.333 0.00 0.00 0.00 2.29
2792 3438 5.649782 ACAATCAATCCATGGTCTTTGTC 57.350 39.130 12.58 0.00 0.00 3.18
2830 3476 9.776158 CAATGTGTTACTTGTGTTAGTTTTGTA 57.224 29.630 0.00 0.00 0.00 2.41
2831 3477 7.757624 CCAATGTGTTACTTGTGTTAGTTTTGT 59.242 33.333 0.00 0.00 0.00 2.83
2832 3478 7.971168 TCCAATGTGTTACTTGTGTTAGTTTTG 59.029 33.333 0.00 0.00 0.00 2.44
2833 3479 8.057536 TCCAATGTGTTACTTGTGTTAGTTTT 57.942 30.769 0.00 0.00 0.00 2.43
2834 3480 7.633193 TCCAATGTGTTACTTGTGTTAGTTT 57.367 32.000 0.00 0.00 0.00 2.66
2835 3481 7.817418 ATCCAATGTGTTACTTGTGTTAGTT 57.183 32.000 0.00 0.00 0.00 2.24
2836 3482 7.934665 TGTATCCAATGTGTTACTTGTGTTAGT 59.065 33.333 0.00 0.00 0.00 2.24
2837 3483 8.317891 TGTATCCAATGTGTTACTTGTGTTAG 57.682 34.615 0.00 0.00 0.00 2.34
2838 3484 8.856153 ATGTATCCAATGTGTTACTTGTGTTA 57.144 30.769 0.00 0.00 0.00 2.41
2839 3485 7.759489 ATGTATCCAATGTGTTACTTGTGTT 57.241 32.000 0.00 0.00 0.00 3.32
2840 3486 7.759489 AATGTATCCAATGTGTTACTTGTGT 57.241 32.000 0.00 0.00 0.00 3.72
2841 3487 8.081633 ACAAATGTATCCAATGTGTTACTTGTG 58.918 33.333 0.00 0.00 0.00 3.33
2842 3488 8.081633 CACAAATGTATCCAATGTGTTACTTGT 58.918 33.333 0.00 0.00 37.54 3.16
2843 3489 8.081633 ACACAAATGTATCCAATGTGTTACTTG 58.918 33.333 7.21 0.00 45.64 3.16
2844 3490 8.177119 ACACAAATGTATCCAATGTGTTACTT 57.823 30.769 7.21 0.00 45.64 2.24
2925 3571 0.806868 TGAAGTAGACCGTGTAGCCG 59.193 55.000 0.00 0.00 0.00 5.52
3117 3763 1.446099 CTTCTCGGCGCTGTTGCTA 60.446 57.895 17.37 0.00 36.97 3.49
3122 3768 3.226429 TTGCTCTTCTCGGCGCTGT 62.226 57.895 17.37 0.00 0.00 4.40
3178 3824 2.776526 AGGCTGGTGGTGGGTGAA 60.777 61.111 0.00 0.00 0.00 3.18
3429 4078 1.076533 ACTCGAGGCGTGTAAATGCG 61.077 55.000 18.41 0.00 31.87 4.73
3772 4430 0.039437 GACACACGTCATGTCTCGGT 60.039 55.000 18.18 0.00 40.64 4.69
3774 4432 1.065572 CGGACACACGTCATGTCTCG 61.066 60.000 22.44 19.86 44.88 4.04
3779 4437 2.733218 ACGCGGACACACGTCATG 60.733 61.111 12.47 0.00 44.54 3.07
3780 4438 2.733218 CACGCGGACACACGTCAT 60.733 61.111 12.47 0.00 44.54 3.06
3833 4491 2.752238 CGGCCTCGTCTCAGTCCT 60.752 66.667 0.00 0.00 0.00 3.85
3861 4519 2.203972 TAAGGTCAAGGTCGCGTCCG 62.204 60.000 16.59 3.89 0.00 4.79
3962 4620 3.063485 AGCGAGCAAGAAAGAGAAGAAC 58.937 45.455 0.00 0.00 0.00 3.01
3988 4646 1.673033 CGTGCAAAAACCAACCCAACA 60.673 47.619 0.00 0.00 0.00 3.33
3989 4647 1.003108 CGTGCAAAAACCAACCCAAC 58.997 50.000 0.00 0.00 0.00 3.77
4113 4778 3.265791 CAAGACGGAGATCCCAGAAAAG 58.734 50.000 0.00 0.00 34.14 2.27
4153 4818 7.148507 CGGAGATAGAATCATGTTAATCAAGCC 60.149 40.741 0.00 0.00 0.00 4.35
4163 4828 5.596361 AGACAAGACGGAGATAGAATCATGT 59.404 40.000 0.00 0.00 0.00 3.21
4173 4838 4.608948 AAGTTGAAGACAAGACGGAGAT 57.391 40.909 0.00 0.00 36.64 2.75
4174 4839 4.119862 CAAAGTTGAAGACAAGACGGAGA 58.880 43.478 0.00 0.00 36.64 3.71
4175 4840 3.303395 GCAAAGTTGAAGACAAGACGGAG 60.303 47.826 0.00 0.00 36.64 4.63
4176 4841 2.612212 GCAAAGTTGAAGACAAGACGGA 59.388 45.455 0.00 0.00 36.64 4.69
4177 4842 2.599848 CGCAAAGTTGAAGACAAGACGG 60.600 50.000 0.00 0.00 36.64 4.79
4178 4843 2.030457 ACGCAAAGTTGAAGACAAGACG 59.970 45.455 0.00 0.00 36.64 4.18
4179 4844 3.675467 ACGCAAAGTTGAAGACAAGAC 57.325 42.857 0.00 0.00 36.64 3.01
4180 4845 4.695217 AAACGCAAAGTTGAAGACAAGA 57.305 36.364 0.00 0.00 43.37 3.02
4181 4846 4.031652 CCAAAACGCAAAGTTGAAGACAAG 59.968 41.667 0.00 0.00 43.37 3.16
4182 4847 3.923461 CCAAAACGCAAAGTTGAAGACAA 59.077 39.130 0.00 0.00 43.37 3.18
4183 4848 3.506810 CCAAAACGCAAAGTTGAAGACA 58.493 40.909 0.00 0.00 43.37 3.41
4184 4849 2.281498 GCCAAAACGCAAAGTTGAAGAC 59.719 45.455 0.00 0.00 43.37 3.01
4185 4850 2.165437 AGCCAAAACGCAAAGTTGAAGA 59.835 40.909 0.00 0.00 43.37 2.87
4186 4851 2.539476 AGCCAAAACGCAAAGTTGAAG 58.461 42.857 0.00 0.00 43.37 3.02
4187 4852 2.663826 AGCCAAAACGCAAAGTTGAA 57.336 40.000 0.00 0.00 43.37 2.69
4188 4853 2.094494 TCAAGCCAAAACGCAAAGTTGA 60.094 40.909 0.00 0.00 43.37 3.18
4189 4854 2.266554 TCAAGCCAAAACGCAAAGTTG 58.733 42.857 0.00 0.00 43.37 3.16
4190 4855 2.663826 TCAAGCCAAAACGCAAAGTT 57.336 40.000 0.00 0.00 46.76 2.66
4191 4856 2.888834 ATCAAGCCAAAACGCAAAGT 57.111 40.000 0.00 0.00 0.00 2.66
4192 4857 4.505922 TGTTAATCAAGCCAAAACGCAAAG 59.494 37.500 0.00 0.00 0.00 2.77
4193 4858 4.433615 TGTTAATCAAGCCAAAACGCAAA 58.566 34.783 0.00 0.00 0.00 3.68
4194 4859 4.046938 TGTTAATCAAGCCAAAACGCAA 57.953 36.364 0.00 0.00 0.00 4.85
4195 4860 3.717400 TGTTAATCAAGCCAAAACGCA 57.283 38.095 0.00 0.00 0.00 5.24
4196 4861 4.233789 TCATGTTAATCAAGCCAAAACGC 58.766 39.130 0.00 0.00 0.00 4.84
4197 4862 6.808212 AGAATCATGTTAATCAAGCCAAAACG 59.192 34.615 0.00 0.00 0.00 3.60
4198 4863 7.814107 TCAGAATCATGTTAATCAAGCCAAAAC 59.186 33.333 0.00 0.00 0.00 2.43
4199 4864 7.894708 TCAGAATCATGTTAATCAAGCCAAAA 58.105 30.769 0.00 0.00 0.00 2.44
4200 4865 7.465353 TCAGAATCATGTTAATCAAGCCAAA 57.535 32.000 0.00 0.00 0.00 3.28
4201 4866 7.649533 ATCAGAATCATGTTAATCAAGCCAA 57.350 32.000 0.00 0.00 0.00 4.52
4202 4867 7.649533 AATCAGAATCATGTTAATCAAGCCA 57.350 32.000 0.00 0.00 0.00 4.75
4203 4868 9.455847 GTTAATCAGAATCATGTTAATCAAGCC 57.544 33.333 0.00 0.00 0.00 4.35
4213 4878 9.950496 GGGAGTATATGTTAATCAGAATCATGT 57.050 33.333 0.00 0.00 0.00 3.21
4216 4881 9.159254 ACAGGGAGTATATGTTAATCAGAATCA 57.841 33.333 0.00 0.00 0.00 2.57
4219 4884 9.090103 CCTACAGGGAGTATATGTTAATCAGAA 57.910 37.037 0.00 0.00 37.23 3.02
4220 4885 8.453681 TCCTACAGGGAGTATATGTTAATCAGA 58.546 37.037 0.00 0.00 39.58 3.27
4221 4886 8.651589 TCCTACAGGGAGTATATGTTAATCAG 57.348 38.462 0.00 0.00 39.58 2.90
4222 4887 9.615660 ATTCCTACAGGGAGTATATGTTAATCA 57.384 33.333 0.00 0.00 46.01 2.57
4227 4892 8.974292 ACATATTCCTACAGGGAGTATATGTT 57.026 34.615 12.51 3.19 46.18 2.71
4230 4895 9.884814 GGATACATATTCCTACAGGGAGTATAT 57.115 37.037 0.00 0.00 42.68 0.86
4231 4896 8.852894 TGGATACATATTCCTACAGGGAGTATA 58.147 37.037 0.00 0.00 42.68 1.47
4232 4897 7.719424 TGGATACATATTCCTACAGGGAGTAT 58.281 38.462 0.00 0.00 44.54 2.12
4233 4898 7.111136 TGGATACATATTCCTACAGGGAGTA 57.889 40.000 0.00 0.00 44.21 2.59
4234 4899 5.977533 TGGATACATATTCCTACAGGGAGT 58.022 41.667 0.00 0.00 44.21 3.85
4261 4926 5.698104 TGATGTTGATGAGATAAAGGCCAT 58.302 37.500 5.01 0.00 0.00 4.40
4290 4956 8.070034 TCGAAGGGTATAGTAACTCAAATTCA 57.930 34.615 0.00 0.00 0.00 2.57
4294 4960 6.238842 CGGATCGAAGGGTATAGTAACTCAAA 60.239 42.308 0.00 0.00 0.00 2.69
4301 4967 6.540189 GCTATAACGGATCGAAGGGTATAGTA 59.460 42.308 18.85 0.00 0.00 1.82
4309 4975 4.750098 ACATTTGCTATAACGGATCGAAGG 59.250 41.667 0.00 0.00 0.00 3.46
4314 4980 6.591834 AGCTATGACATTTGCTATAACGGATC 59.408 38.462 12.16 0.00 33.64 3.36
4319 4985 7.173907 ACCATGAGCTATGACATTTGCTATAAC 59.826 37.037 13.34 4.85 39.21 1.89
4345 5011 5.540337 AGAGTAATGCGATATCTGAAGGGAA 59.460 40.000 0.34 0.00 0.00 3.97
4351 5017 6.712547 TCTTGAGAGAGTAATGCGATATCTGA 59.287 38.462 0.34 0.00 0.00 3.27
4352 5018 6.907741 TCTTGAGAGAGTAATGCGATATCTG 58.092 40.000 0.34 0.00 0.00 2.90
4381 5047 5.944007 CCAATCTGAGATATGATCATTGGCA 59.056 40.000 14.65 6.77 34.45 4.92
4382 5048 6.178324 TCCAATCTGAGATATGATCATTGGC 58.822 40.000 14.65 3.87 38.24 4.52
4384 5050 9.063615 TGTTTCCAATCTGAGATATGATCATTG 57.936 33.333 14.65 3.25 0.00 2.82
4386 5052 9.636789 TTTGTTTCCAATCTGAGATATGATCAT 57.363 29.630 13.81 13.81 0.00 2.45
4387 5053 9.465199 TTTTGTTTCCAATCTGAGATATGATCA 57.535 29.630 0.00 0.00 0.00 2.92
4389 5055 9.246670 TGTTTTGTTTCCAATCTGAGATATGAT 57.753 29.630 0.00 0.00 0.00 2.45
4397 5063 8.062065 ACTAAGTTGTTTTGTTTCCAATCTGA 57.938 30.769 0.00 0.00 0.00 3.27
4410 5076 5.102313 GCAGTGAGCAAACTAAGTTGTTTT 58.898 37.500 0.00 0.00 44.79 2.43
4431 5097 2.231964 GAGGCCTGAAATGTCATTTGCA 59.768 45.455 12.00 11.50 31.85 4.08
4432 5098 2.494870 AGAGGCCTGAAATGTCATTTGC 59.505 45.455 12.00 12.08 31.85 3.68
4433 5099 4.491676 CAAGAGGCCTGAAATGTCATTTG 58.508 43.478 12.00 2.95 31.85 2.32
4434 5100 3.056322 GCAAGAGGCCTGAAATGTCATTT 60.056 43.478 12.00 10.63 36.11 2.32
4445 5111 2.021068 TAGCTAGCGCAAGAGGCCTG 62.021 60.000 12.00 0.00 40.31 4.85
4446 5112 1.330655 TTAGCTAGCGCAAGAGGCCT 61.331 55.000 3.86 3.86 40.31 5.19
4471 5137 5.694816 ACTATCTGATAATTGTCTCGCTCG 58.305 41.667 3.72 0.00 0.00 5.03
4491 5157 7.272978 GCCACTAAAGATTGGTTGAGATACTA 58.727 38.462 0.00 0.00 35.09 1.82
4503 5169 5.359009 AGAATCACATGGCCACTAAAGATTG 59.641 40.000 8.16 1.39 0.00 2.67
4504 5170 5.513233 AGAATCACATGGCCACTAAAGATT 58.487 37.500 8.16 13.72 0.00 2.40
4509 5175 5.076182 TCAAAAGAATCACATGGCCACTAA 58.924 37.500 8.16 0.00 0.00 2.24
4514 5180 3.256558 GCTTCAAAAGAATCACATGGCC 58.743 45.455 0.00 0.00 0.00 5.36
4520 5186 8.721478 TCTAGTGTATTGCTTCAAAAGAATCAC 58.279 33.333 0.00 0.00 0.00 3.06
4558 5224 5.831702 ATTCCAATTGCAAGCTTCTCTAG 57.168 39.130 4.94 0.00 0.00 2.43
4592 5259 8.231692 TCTCATTATGTGAAAAAGGTGTTGAA 57.768 30.769 0.00 0.00 36.14 2.69
4634 5301 9.859427 CAAGCTGTTGAGAAATGGAAATAATAA 57.141 29.630 0.00 0.00 35.46 1.40
4635 5302 8.469200 CCAAGCTGTTGAGAAATGGAAATAATA 58.531 33.333 0.00 0.00 35.46 0.98
4643 5310 2.624838 ACACCAAGCTGTTGAGAAATGG 59.375 45.455 0.00 0.00 35.46 3.16
4731 5399 4.819630 GGACCACACTCAAAGTTAATGACA 59.180 41.667 0.00 0.00 0.00 3.58
4736 5404 3.935818 TGGGACCACACTCAAAGTTAA 57.064 42.857 0.00 0.00 0.00 2.01
4738 5406 2.818751 TTGGGACCACACTCAAAGTT 57.181 45.000 0.00 0.00 0.00 2.66
4787 5455 0.824182 CGGGGGCGAGAGAGTAATCT 60.824 60.000 0.00 0.00 0.00 2.40
4836 5505 9.383519 ACATCCATAGGCGTTATTATTAATGAG 57.616 33.333 0.00 0.00 0.00 2.90
4844 5513 8.832521 CAACTTTAACATCCATAGGCGTTATTA 58.167 33.333 0.00 0.00 0.00 0.98
4850 5519 4.394920 ACACAACTTTAACATCCATAGGCG 59.605 41.667 0.00 0.00 0.00 5.52
4909 5587 8.125978 TGCTCCATTTTGAGTTGATAAAATCT 57.874 30.769 0.00 0.00 35.07 2.40
4950 5628 3.707611 AGGTCGGGTGTATGCTTATTGTA 59.292 43.478 0.00 0.00 0.00 2.41
4956 5634 0.537188 CAGAGGTCGGGTGTATGCTT 59.463 55.000 0.00 0.00 0.00 3.91
4958 5636 1.521681 GCAGAGGTCGGGTGTATGC 60.522 63.158 0.00 0.00 0.00 3.14
4961 5639 1.479323 GTTATGCAGAGGTCGGGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
4992 5670 1.080298 GCATCTTGGTGTTGGCTGC 60.080 57.895 0.00 0.00 0.00 5.25
5008 5686 0.108424 GGCAGGTTTTTGTGTGTGCA 60.108 50.000 0.00 0.00 32.42 4.57
5023 5701 0.321653 ACTTTCCTACTTGCCGGCAG 60.322 55.000 30.75 24.51 0.00 4.85
5024 5702 0.321298 GACTTTCCTACTTGCCGGCA 60.321 55.000 29.03 29.03 0.00 5.69
5086 5766 1.307309 CAATGGTGGATCTGGCCCA 59.693 57.895 0.00 0.00 0.00 5.36
5087 5767 4.265206 CAATGGTGGATCTGGCCC 57.735 61.111 0.00 0.00 0.00 5.80


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.