Multiple sequence alignment - TraesCS7A01G383700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G383700 chr7A 100.000 5060 0 0 1 5060 558758661 558753602 0.000000e+00 9345.0
1 TraesCS7A01G383700 chr7D 94.827 3847 122 24 535 4329 492223073 492219252 0.000000e+00 5930.0
2 TraesCS7A01G383700 chr7D 93.185 719 33 7 4344 5060 492219162 492218458 0.000000e+00 1042.0
3 TraesCS7A01G383700 chr7B 94.617 3827 120 30 552 4328 521619017 521615227 0.000000e+00 5847.0
4 TraesCS7A01G383700 chr7B 94.475 724 33 5 4342 5060 521615152 521614431 0.000000e+00 1109.0
5 TraesCS7A01G383700 chr7B 97.436 39 1 0 4293 4331 69587515 69587477 3.270000e-07 67.6
6 TraesCS7A01G383700 chr5D 87.075 441 54 3 54 493 318867412 318867850 3.520000e-136 496.0
7 TraesCS7A01G383700 chr5D 87.045 440 56 1 54 493 505372094 505371656 3.520000e-136 496.0
8 TraesCS7A01G383700 chr5D 79.284 531 96 9 2438 2958 197152404 197151878 4.820000e-95 359.0
9 TraesCS7A01G383700 chr5D 94.872 39 2 0 4293 4331 449292801 449292839 1.520000e-05 62.1
10 TraesCS7A01G383700 chr1A 86.136 440 60 1 54 493 572682164 572681726 1.650000e-129 473.0
11 TraesCS7A01G383700 chr1A 85.616 438 63 0 56 493 536932398 536931961 1.280000e-125 460.0
12 TraesCS7A01G383700 chr1A 94.872 39 2 0 4293 4331 460934478 460934516 1.520000e-05 62.1
13 TraesCS7A01G383700 chr4D 83.174 523 79 8 2438 2954 70119277 70119796 2.130000e-128 470.0
14 TraesCS7A01G383700 chr4D 85.714 441 61 2 54 493 417415490 417415051 9.920000e-127 464.0
15 TraesCS7A01G383700 chr4D 81.959 194 33 2 3577 3769 70120253 70120445 4.050000e-36 163.0
16 TraesCS7A01G383700 chr4A 83.174 523 79 8 2438 2954 522294309 522294828 2.130000e-128 470.0
17 TraesCS7A01G383700 chr4A 81.959 194 33 2 3577 3769 522295285 522295477 4.050000e-36 163.0
18 TraesCS7A01G383700 chr4A 87.755 49 4 2 4284 4331 565436115 565436162 7.080000e-04 56.5
19 TraesCS7A01G383700 chr4B 84.472 483 66 8 2478 2954 103773177 103773656 7.670000e-128 468.0
20 TraesCS7A01G383700 chr4B 82.447 188 31 2 3577 3763 103774113 103774299 4.050000e-36 163.0
21 TraesCS7A01G383700 chr1D 85.194 439 63 2 56 493 306222377 306222814 2.780000e-122 449.0
22 TraesCS7A01G383700 chr1D 95.614 228 10 0 1257 1484 42038588 42038815 2.880000e-97 366.0
23 TraesCS7A01G383700 chr1D 93.805 113 5 2 1096 1207 42038495 42038606 8.710000e-38 169.0
24 TraesCS7A01G383700 chr1D 96.739 92 3 0 1597 1688 42038810 42038901 2.440000e-33 154.0
25 TraesCS7A01G383700 chr3D 85.034 441 63 3 54 493 612703896 612703458 3.590000e-121 446.0
26 TraesCS7A01G383700 chr3D 84.773 440 65 2 54 492 580537238 580537676 1.670000e-119 440.0
27 TraesCS7A01G383700 chr3A 84.932 438 65 1 56 493 111881059 111880623 4.650000e-120 442.0
28 TraesCS7A01G383700 chr3A 93.421 228 15 0 1257 1484 13265216 13264989 6.280000e-89 339.0
29 TraesCS7A01G383700 chr3A 92.920 113 6 2 1096 1207 13265309 13265198 4.050000e-36 163.0
30 TraesCS7A01G383700 chr3A 88.000 100 6 3 1598 1691 13264993 13264894 4.140000e-21 113.0
31 TraesCS7A01G383700 chr3A 95.833 48 2 0 1724 1771 13264840 13264887 1.510000e-10 78.7
32 TraesCS7A01G383700 chr3A 97.436 39 1 0 4293 4331 74237225 74237187 3.270000e-07 67.6
33 TraesCS7A01G383700 chr5A 79.880 502 89 8 2438 2930 227923754 227924252 1.730000e-94 357.0
34 TraesCS7A01G383700 chr2D 94.298 228 13 0 1257 1484 28963979 28964206 2.900000e-92 350.0
35 TraesCS7A01G383700 chr2D 93.805 113 5 2 1096 1207 28963886 28963997 8.710000e-38 169.0
36 TraesCS7A01G383700 chr2D 94.565 92 5 0 1597 1688 28964201 28964292 5.280000e-30 143.0
37 TraesCS7A01G383700 chr2D 88.000 50 4 2 4283 4331 594403846 594403894 1.970000e-04 58.4
38 TraesCS7A01G383700 chr5B 79.441 501 93 6 2438 2930 213250429 213250927 3.750000e-91 346.0
39 TraesCS7A01G383700 chr5B 92.308 39 3 0 4293 4331 247256218 247256180 7.080000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G383700 chr7A 558753602 558758661 5059 True 9345.0 9345 100.0000 1 5060 1 chr7A.!!$R1 5059
1 TraesCS7A01G383700 chr7D 492218458 492223073 4615 True 3486.0 5930 94.0060 535 5060 2 chr7D.!!$R1 4525
2 TraesCS7A01G383700 chr7B 521614431 521619017 4586 True 3478.0 5847 94.5460 552 5060 2 chr7B.!!$R2 4508
3 TraesCS7A01G383700 chr5D 197151878 197152404 526 True 359.0 359 79.2840 2438 2958 1 chr5D.!!$R1 520
4 TraesCS7A01G383700 chr4D 70119277 70120445 1168 False 316.5 470 82.5665 2438 3769 2 chr4D.!!$F1 1331
5 TraesCS7A01G383700 chr4A 522294309 522295477 1168 False 316.5 470 82.5665 2438 3769 2 chr4A.!!$F2 1331
6 TraesCS7A01G383700 chr4B 103773177 103774299 1122 False 315.5 468 83.4595 2478 3763 2 chr4B.!!$F1 1285

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 447 0.101399 CGAGGGAGAGACAATGACGG 59.899 60.0 0.00 0.0 0.00 4.79 F
488 489 0.169672 GGTGCTTGTAGTCGTCGCTA 59.830 55.0 0.00 0.0 0.00 4.26 F
943 972 0.239082 CTAAAACCCGCGTCCAAACC 59.761 55.0 4.92 0.0 0.00 3.27 F
2411 2449 0.671796 TGACACGACGATGGTGACTT 59.328 50.0 0.00 0.0 38.73 3.01 F
3358 3414 0.184451 TCGGAGTATACGGGAAGCCT 59.816 55.0 0.00 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2418 2456 0.599558 GCTCAGCCAAATCTGCACAA 59.400 50.000 0.00 0.00 34.19 3.33 R
2986 3035 6.024049 CGGTGAGAACTCATAAGCAAAAATC 58.976 40.000 7.77 0.00 42.18 2.17 R
3029 3085 1.063006 CCGTCATTGCTGCGAATGG 59.937 57.895 18.14 5.52 34.58 3.16 R
3536 3592 0.177836 ACATCCATCAATGTCGCGGA 59.822 50.000 6.13 0.00 34.84 5.54 R
4461 4626 1.070134 GCATCTGCCGTGGATACCTTA 59.930 52.381 0.00 0.00 34.31 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.243007 TCATAGGATGAGTGTATGTGCG 57.757 45.455 0.00 0.00 33.59 5.34
25 26 3.636764 TCATAGGATGAGTGTATGTGCGT 59.363 43.478 0.00 0.00 33.59 5.24
26 27 2.299993 AGGATGAGTGTATGTGCGTG 57.700 50.000 0.00 0.00 0.00 5.34
27 28 1.824852 AGGATGAGTGTATGTGCGTGA 59.175 47.619 0.00 0.00 0.00 4.35
28 29 2.159184 AGGATGAGTGTATGTGCGTGAG 60.159 50.000 0.00 0.00 0.00 3.51
78 79 4.379243 CGGCGTGAGGGCTCTGTT 62.379 66.667 0.00 0.00 39.52 3.16
79 80 2.032681 GGCGTGAGGGCTCTGTTT 59.967 61.111 0.00 0.00 38.40 2.83
80 81 1.600916 GGCGTGAGGGCTCTGTTTT 60.601 57.895 0.00 0.00 38.40 2.43
81 82 1.578206 GGCGTGAGGGCTCTGTTTTC 61.578 60.000 0.00 0.00 38.40 2.29
82 83 0.884704 GCGTGAGGGCTCTGTTTTCA 60.885 55.000 0.00 0.00 0.00 2.69
84 85 1.541233 CGTGAGGGCTCTGTTTTCAGT 60.541 52.381 0.00 0.00 46.98 3.41
85 86 2.576615 GTGAGGGCTCTGTTTTCAGTT 58.423 47.619 0.00 0.00 46.98 3.16
86 87 2.291741 GTGAGGGCTCTGTTTTCAGTTG 59.708 50.000 0.00 0.00 46.98 3.16
87 88 2.092429 TGAGGGCTCTGTTTTCAGTTGT 60.092 45.455 0.00 0.00 46.98 3.32
88 89 2.952310 GAGGGCTCTGTTTTCAGTTGTT 59.048 45.455 0.00 0.00 46.98 2.83
89 90 3.365472 AGGGCTCTGTTTTCAGTTGTTT 58.635 40.909 0.00 0.00 46.98 2.83
90 91 3.381590 AGGGCTCTGTTTTCAGTTGTTTC 59.618 43.478 0.00 0.00 46.98 2.78
91 92 3.381590 GGGCTCTGTTTTCAGTTGTTTCT 59.618 43.478 0.00 0.00 46.98 2.52
92 93 4.142160 GGGCTCTGTTTTCAGTTGTTTCTT 60.142 41.667 0.00 0.00 46.98 2.52
93 94 5.037385 GGCTCTGTTTTCAGTTGTTTCTTC 58.963 41.667 0.00 0.00 46.98 2.87
94 95 4.730521 GCTCTGTTTTCAGTTGTTTCTTCG 59.269 41.667 0.00 0.00 46.98 3.79
95 96 4.658071 TCTGTTTTCAGTTGTTTCTTCGC 58.342 39.130 0.00 0.00 46.98 4.70
96 97 3.421741 TGTTTTCAGTTGTTTCTTCGCG 58.578 40.909 0.00 0.00 0.00 5.87
97 98 3.120130 TGTTTTCAGTTGTTTCTTCGCGT 60.120 39.130 5.77 0.00 0.00 6.01
98 99 3.750639 TTTCAGTTGTTTCTTCGCGTT 57.249 38.095 5.77 0.00 0.00 4.84
99 100 3.750639 TTCAGTTGTTTCTTCGCGTTT 57.249 38.095 5.77 0.00 0.00 3.60
100 101 3.750639 TCAGTTGTTTCTTCGCGTTTT 57.249 38.095 5.77 0.00 0.00 2.43
101 102 3.421741 TCAGTTGTTTCTTCGCGTTTTG 58.578 40.909 5.77 0.00 0.00 2.44
102 103 3.120130 TCAGTTGTTTCTTCGCGTTTTGT 60.120 39.130 5.77 0.00 0.00 2.83
103 104 3.606346 CAGTTGTTTCTTCGCGTTTTGTT 59.394 39.130 5.77 0.00 0.00 2.83
104 105 4.789119 CAGTTGTTTCTTCGCGTTTTGTTA 59.211 37.500 5.77 0.00 0.00 2.41
105 106 4.789629 AGTTGTTTCTTCGCGTTTTGTTAC 59.210 37.500 5.77 0.00 0.00 2.50
106 107 3.343990 TGTTTCTTCGCGTTTTGTTACG 58.656 40.909 5.77 0.00 44.09 3.18
107 108 3.061831 TGTTTCTTCGCGTTTTGTTACGA 59.938 39.130 5.77 0.00 43.99 3.43
108 109 4.206088 GTTTCTTCGCGTTTTGTTACGAT 58.794 39.130 5.77 0.00 43.99 3.73
109 110 4.455917 TTCTTCGCGTTTTGTTACGATT 57.544 36.364 5.77 0.00 43.99 3.34
110 111 4.455917 TCTTCGCGTTTTGTTACGATTT 57.544 36.364 5.77 0.00 43.99 2.17
111 112 4.205334 TCTTCGCGTTTTGTTACGATTTG 58.795 39.130 5.77 0.00 43.99 2.32
112 113 3.589061 TCGCGTTTTGTTACGATTTGT 57.411 38.095 5.77 0.00 43.99 2.83
113 114 3.281601 TCGCGTTTTGTTACGATTTGTG 58.718 40.909 5.77 0.00 43.99 3.33
114 115 3.030441 CGCGTTTTGTTACGATTTGTGT 58.970 40.909 0.00 0.00 43.99 3.72
115 116 3.479232 CGCGTTTTGTTACGATTTGTGTT 59.521 39.130 0.00 0.00 43.99 3.32
116 117 4.372252 CGCGTTTTGTTACGATTTGTGTTC 60.372 41.667 0.00 0.00 43.99 3.18
117 118 4.731480 GCGTTTTGTTACGATTTGTGTTCT 59.269 37.500 0.00 0.00 43.99 3.01
118 119 5.330498 GCGTTTTGTTACGATTTGTGTTCTG 60.330 40.000 0.00 0.00 43.99 3.02
119 120 5.330498 CGTTTTGTTACGATTTGTGTTCTGC 60.330 40.000 0.00 0.00 43.99 4.26
120 121 5.493133 TTTGTTACGATTTGTGTTCTGCT 57.507 34.783 0.00 0.00 0.00 4.24
121 122 4.725556 TGTTACGATTTGTGTTCTGCTC 57.274 40.909 0.00 0.00 0.00 4.26
122 123 4.123506 TGTTACGATTTGTGTTCTGCTCA 58.876 39.130 0.00 0.00 0.00 4.26
123 124 4.211164 TGTTACGATTTGTGTTCTGCTCAG 59.789 41.667 0.00 0.00 0.00 3.35
124 125 2.146342 ACGATTTGTGTTCTGCTCAGG 58.854 47.619 0.00 0.00 0.00 3.86
125 126 2.224281 ACGATTTGTGTTCTGCTCAGGA 60.224 45.455 0.00 0.00 0.00 3.86
126 127 2.807967 CGATTTGTGTTCTGCTCAGGAA 59.192 45.455 0.00 0.00 0.00 3.36
127 128 3.120408 CGATTTGTGTTCTGCTCAGGAAG 60.120 47.826 0.00 0.00 0.00 3.46
128 129 3.558931 TTTGTGTTCTGCTCAGGAAGA 57.441 42.857 0.00 0.00 0.00 2.87
129 130 2.533266 TGTGTTCTGCTCAGGAAGAC 57.467 50.000 0.00 0.00 37.44 3.01
130 131 1.269778 TGTGTTCTGCTCAGGAAGACG 60.270 52.381 0.00 0.00 39.02 4.18
131 132 1.000163 GTGTTCTGCTCAGGAAGACGA 60.000 52.381 0.00 0.00 29.82 4.20
132 133 1.270826 TGTTCTGCTCAGGAAGACGAG 59.729 52.381 0.00 0.00 0.00 4.18
133 134 1.542030 GTTCTGCTCAGGAAGACGAGA 59.458 52.381 0.00 0.00 0.00 4.04
134 135 1.169577 TCTGCTCAGGAAGACGAGAC 58.830 55.000 0.00 0.00 0.00 3.36
135 136 0.179176 CTGCTCAGGAAGACGAGACG 60.179 60.000 0.00 0.00 0.00 4.18
136 137 1.137825 GCTCAGGAAGACGAGACGG 59.862 63.158 0.00 0.00 0.00 4.79
137 138 1.137825 CTCAGGAAGACGAGACGGC 59.862 63.158 0.00 0.00 33.59 5.68
138 139 2.202492 CAGGAAGACGAGACGGCG 60.202 66.667 4.80 4.80 41.28 6.46
139 140 3.441290 AGGAAGACGAGACGGCGG 61.441 66.667 13.24 0.00 41.28 6.13
154 155 3.854669 CGGCGGCTCCCTGAAGAT 61.855 66.667 7.61 0.00 0.00 2.40
155 156 2.203126 GGCGGCTCCCTGAAGATG 60.203 66.667 0.00 0.00 0.00 2.90
156 157 2.586792 GCGGCTCCCTGAAGATGT 59.413 61.111 0.00 0.00 0.00 3.06
157 158 1.686325 GGCGGCTCCCTGAAGATGTA 61.686 60.000 0.00 0.00 0.00 2.29
158 159 0.249657 GCGGCTCCCTGAAGATGTAG 60.250 60.000 0.00 0.00 0.00 2.74
159 160 1.115467 CGGCTCCCTGAAGATGTAGT 58.885 55.000 0.00 0.00 0.00 2.73
160 161 2.307768 CGGCTCCCTGAAGATGTAGTA 58.692 52.381 0.00 0.00 0.00 1.82
161 162 2.693591 CGGCTCCCTGAAGATGTAGTAA 59.306 50.000 0.00 0.00 0.00 2.24
162 163 3.322254 CGGCTCCCTGAAGATGTAGTAAT 59.678 47.826 0.00 0.00 0.00 1.89
163 164 4.636249 GGCTCCCTGAAGATGTAGTAATG 58.364 47.826 0.00 0.00 0.00 1.90
164 165 4.101741 GGCTCCCTGAAGATGTAGTAATGT 59.898 45.833 0.00 0.00 0.00 2.71
165 166 5.396884 GGCTCCCTGAAGATGTAGTAATGTT 60.397 44.000 0.00 0.00 0.00 2.71
166 167 5.755861 GCTCCCTGAAGATGTAGTAATGTTC 59.244 44.000 0.00 0.00 32.02 3.18
167 168 6.407525 GCTCCCTGAAGATGTAGTAATGTTCT 60.408 42.308 0.00 0.00 32.49 3.01
168 169 7.496346 TCCCTGAAGATGTAGTAATGTTCTT 57.504 36.000 0.00 0.00 32.49 2.52
169 170 7.556844 TCCCTGAAGATGTAGTAATGTTCTTC 58.443 38.462 0.00 0.00 41.58 2.87
170 171 6.763610 CCCTGAAGATGTAGTAATGTTCTTCC 59.236 42.308 8.12 0.00 40.88 3.46
171 172 6.763610 CCTGAAGATGTAGTAATGTTCTTCCC 59.236 42.308 8.12 0.00 40.88 3.97
172 173 6.338146 TGAAGATGTAGTAATGTTCTTCCCG 58.662 40.000 8.12 0.00 40.88 5.14
173 174 4.694339 AGATGTAGTAATGTTCTTCCCGC 58.306 43.478 0.00 0.00 0.00 6.13
174 175 3.255969 TGTAGTAATGTTCTTCCCGCC 57.744 47.619 0.00 0.00 0.00 6.13
175 176 2.835764 TGTAGTAATGTTCTTCCCGCCT 59.164 45.455 0.00 0.00 0.00 5.52
176 177 4.025360 TGTAGTAATGTTCTTCCCGCCTA 58.975 43.478 0.00 0.00 0.00 3.93
177 178 3.821421 AGTAATGTTCTTCCCGCCTAG 57.179 47.619 0.00 0.00 0.00 3.02
178 179 2.158943 AGTAATGTTCTTCCCGCCTAGC 60.159 50.000 0.00 0.00 0.00 3.42
179 180 0.107165 AATGTTCTTCCCGCCTAGCC 60.107 55.000 0.00 0.00 0.00 3.93
180 181 1.984288 ATGTTCTTCCCGCCTAGCCC 61.984 60.000 0.00 0.00 0.00 5.19
181 182 3.087906 TTCTTCCCGCCTAGCCCC 61.088 66.667 0.00 0.00 0.00 5.80
182 183 3.635869 TTCTTCCCGCCTAGCCCCT 62.636 63.158 0.00 0.00 0.00 4.79
183 184 3.866582 CTTCCCGCCTAGCCCCTG 61.867 72.222 0.00 0.00 0.00 4.45
184 185 4.733725 TTCCCGCCTAGCCCCTGT 62.734 66.667 0.00 0.00 0.00 4.00
187 188 3.083997 CCGCCTAGCCCCTGTCTT 61.084 66.667 0.00 0.00 0.00 3.01
188 189 2.187946 CGCCTAGCCCCTGTCTTG 59.812 66.667 0.00 0.00 0.00 3.02
189 190 2.359169 CGCCTAGCCCCTGTCTTGA 61.359 63.158 0.00 0.00 0.00 3.02
190 191 1.690219 CGCCTAGCCCCTGTCTTGAT 61.690 60.000 0.00 0.00 0.00 2.57
191 192 0.548510 GCCTAGCCCCTGTCTTGATT 59.451 55.000 0.00 0.00 0.00 2.57
192 193 1.768870 GCCTAGCCCCTGTCTTGATTA 59.231 52.381 0.00 0.00 0.00 1.75
193 194 2.373502 GCCTAGCCCCTGTCTTGATTAT 59.626 50.000 0.00 0.00 0.00 1.28
194 195 3.808618 GCCTAGCCCCTGTCTTGATTATG 60.809 52.174 0.00 0.00 0.00 1.90
195 196 3.392616 CCTAGCCCCTGTCTTGATTATGT 59.607 47.826 0.00 0.00 0.00 2.29
196 197 3.567478 AGCCCCTGTCTTGATTATGTC 57.433 47.619 0.00 0.00 0.00 3.06
197 198 3.118531 AGCCCCTGTCTTGATTATGTCT 58.881 45.455 0.00 0.00 0.00 3.41
198 199 3.135530 AGCCCCTGTCTTGATTATGTCTC 59.864 47.826 0.00 0.00 0.00 3.36
199 200 3.135530 GCCCCTGTCTTGATTATGTCTCT 59.864 47.826 0.00 0.00 0.00 3.10
200 201 4.345257 GCCCCTGTCTTGATTATGTCTCTA 59.655 45.833 0.00 0.00 0.00 2.43
201 202 5.510520 GCCCCTGTCTTGATTATGTCTCTAG 60.511 48.000 0.00 0.00 0.00 2.43
202 203 5.510520 CCCCTGTCTTGATTATGTCTCTAGC 60.511 48.000 0.00 0.00 0.00 3.42
203 204 5.069648 CCCTGTCTTGATTATGTCTCTAGCA 59.930 44.000 0.00 0.00 0.00 3.49
204 205 6.239543 CCCTGTCTTGATTATGTCTCTAGCAT 60.240 42.308 0.00 0.00 0.00 3.79
205 206 6.867816 CCTGTCTTGATTATGTCTCTAGCATC 59.132 42.308 0.00 0.00 0.00 3.91
206 207 7.255906 CCTGTCTTGATTATGTCTCTAGCATCT 60.256 40.741 0.00 0.00 0.00 2.90
207 208 8.016301 TGTCTTGATTATGTCTCTAGCATCTT 57.984 34.615 0.00 0.00 0.00 2.40
208 209 8.140628 TGTCTTGATTATGTCTCTAGCATCTTC 58.859 37.037 0.00 0.00 0.00 2.87
209 210 7.325821 GTCTTGATTATGTCTCTAGCATCTTCG 59.674 40.741 0.00 0.00 0.00 3.79
210 211 6.884280 TGATTATGTCTCTAGCATCTTCGA 57.116 37.500 0.00 0.00 0.00 3.71
211 212 7.459795 TGATTATGTCTCTAGCATCTTCGAT 57.540 36.000 0.00 0.00 0.00 3.59
212 213 7.311408 TGATTATGTCTCTAGCATCTTCGATG 58.689 38.462 0.00 0.00 0.00 3.84
213 214 3.998099 TGTCTCTAGCATCTTCGATGG 57.002 47.619 6.04 0.00 0.00 3.51
214 215 2.625314 TGTCTCTAGCATCTTCGATGGG 59.375 50.000 6.04 0.00 0.00 4.00
215 216 2.625790 GTCTCTAGCATCTTCGATGGGT 59.374 50.000 6.04 0.00 0.00 4.51
216 217 2.625314 TCTCTAGCATCTTCGATGGGTG 59.375 50.000 6.04 0.00 0.00 4.61
217 218 1.688735 TCTAGCATCTTCGATGGGTGG 59.311 52.381 6.04 0.00 0.00 4.61
218 219 0.758734 TAGCATCTTCGATGGGTGGG 59.241 55.000 6.04 0.00 0.00 4.61
219 220 1.224592 GCATCTTCGATGGGTGGGT 59.775 57.895 6.04 0.00 0.00 4.51
220 221 1.097547 GCATCTTCGATGGGTGGGTG 61.098 60.000 6.04 0.00 0.00 4.61
221 222 0.464373 CATCTTCGATGGGTGGGTGG 60.464 60.000 0.00 0.00 0.00 4.61
222 223 0.620410 ATCTTCGATGGGTGGGTGGA 60.620 55.000 0.00 0.00 0.00 4.02
223 224 1.221840 CTTCGATGGGTGGGTGGAG 59.778 63.158 0.00 0.00 0.00 3.86
224 225 2.257409 CTTCGATGGGTGGGTGGAGG 62.257 65.000 0.00 0.00 0.00 4.30
225 226 3.009115 CGATGGGTGGGTGGAGGT 61.009 66.667 0.00 0.00 0.00 3.85
226 227 2.677228 GATGGGTGGGTGGAGGTG 59.323 66.667 0.00 0.00 0.00 4.00
227 228 2.121506 ATGGGTGGGTGGAGGTGT 60.122 61.111 0.00 0.00 0.00 4.16
228 229 2.484287 GATGGGTGGGTGGAGGTGTG 62.484 65.000 0.00 0.00 0.00 3.82
229 230 3.175710 GGGTGGGTGGAGGTGTGT 61.176 66.667 0.00 0.00 0.00 3.72
230 231 2.430367 GGTGGGTGGAGGTGTGTC 59.570 66.667 0.00 0.00 0.00 3.67
231 232 2.147387 GGTGGGTGGAGGTGTGTCT 61.147 63.158 0.00 0.00 0.00 3.41
232 233 1.371558 GTGGGTGGAGGTGTGTCTC 59.628 63.158 0.00 0.00 0.00 3.36
237 238 2.657237 GGAGGTGTGTCTCCGGTG 59.343 66.667 0.00 0.00 43.19 4.94
238 239 1.906824 GGAGGTGTGTCTCCGGTGA 60.907 63.158 0.00 0.06 43.19 4.02
239 240 1.469335 GGAGGTGTGTCTCCGGTGAA 61.469 60.000 7.99 0.00 43.19 3.18
240 241 0.608640 GAGGTGTGTCTCCGGTGAAT 59.391 55.000 7.99 0.00 0.00 2.57
241 242 0.608640 AGGTGTGTCTCCGGTGAATC 59.391 55.000 7.99 5.14 0.00 2.52
242 243 0.608640 GGTGTGTCTCCGGTGAATCT 59.391 55.000 7.99 0.00 0.00 2.40
243 244 1.822990 GGTGTGTCTCCGGTGAATCTA 59.177 52.381 7.99 0.00 0.00 1.98
244 245 2.431057 GGTGTGTCTCCGGTGAATCTAT 59.569 50.000 7.99 0.00 0.00 1.98
245 246 3.118738 GGTGTGTCTCCGGTGAATCTATT 60.119 47.826 7.99 0.00 0.00 1.73
246 247 4.098960 GGTGTGTCTCCGGTGAATCTATTA 59.901 45.833 7.99 0.00 0.00 0.98
247 248 5.221461 GGTGTGTCTCCGGTGAATCTATTAT 60.221 44.000 7.99 0.00 0.00 1.28
248 249 6.281405 GTGTGTCTCCGGTGAATCTATTATT 58.719 40.000 7.99 0.00 0.00 1.40
249 250 6.201044 GTGTGTCTCCGGTGAATCTATTATTG 59.799 42.308 7.99 0.00 0.00 1.90
250 251 5.696724 GTGTCTCCGGTGAATCTATTATTGG 59.303 44.000 7.99 0.00 0.00 3.16
251 252 5.365605 TGTCTCCGGTGAATCTATTATTGGT 59.634 40.000 7.99 0.00 0.00 3.67
252 253 5.696724 GTCTCCGGTGAATCTATTATTGGTG 59.303 44.000 7.99 0.00 0.00 4.17
253 254 5.600898 TCTCCGGTGAATCTATTATTGGTGA 59.399 40.000 3.14 0.00 0.00 4.02
254 255 6.099125 TCTCCGGTGAATCTATTATTGGTGAA 59.901 38.462 3.14 0.00 0.00 3.18
255 256 6.837312 TCCGGTGAATCTATTATTGGTGAAT 58.163 36.000 0.00 0.00 0.00 2.57
256 257 7.287061 TCCGGTGAATCTATTATTGGTGAATT 58.713 34.615 0.00 0.00 0.00 2.17
257 258 7.777910 TCCGGTGAATCTATTATTGGTGAATTT 59.222 33.333 0.00 0.00 0.00 1.82
258 259 7.862372 CCGGTGAATCTATTATTGGTGAATTTG 59.138 37.037 0.00 0.00 0.00 2.32
259 260 7.379529 CGGTGAATCTATTATTGGTGAATTTGC 59.620 37.037 0.00 0.00 0.00 3.68
260 261 8.416329 GGTGAATCTATTATTGGTGAATTTGCT 58.584 33.333 0.00 0.00 0.00 3.91
261 262 9.455847 GTGAATCTATTATTGGTGAATTTGCTC 57.544 33.333 0.00 0.00 0.00 4.26
262 263 8.344831 TGAATCTATTATTGGTGAATTTGCTCG 58.655 33.333 0.00 0.00 0.00 5.03
263 264 6.618287 TCTATTATTGGTGAATTTGCTCGG 57.382 37.500 0.00 0.00 0.00 4.63
264 265 6.353323 TCTATTATTGGTGAATTTGCTCGGA 58.647 36.000 0.00 0.00 0.00 4.55
265 266 6.998074 TCTATTATTGGTGAATTTGCTCGGAT 59.002 34.615 0.00 0.00 0.00 4.18
266 267 5.499139 TTATTGGTGAATTTGCTCGGATC 57.501 39.130 0.00 0.00 0.00 3.36
267 268 2.787473 TGGTGAATTTGCTCGGATCT 57.213 45.000 0.00 0.00 0.00 2.75
268 269 2.358957 TGGTGAATTTGCTCGGATCTG 58.641 47.619 0.00 0.00 0.00 2.90
269 270 1.672881 GGTGAATTTGCTCGGATCTGG 59.327 52.381 0.62 0.00 0.00 3.86
270 271 1.064654 GTGAATTTGCTCGGATCTGGC 59.935 52.381 0.62 4.93 0.00 4.85
271 272 0.665298 GAATTTGCTCGGATCTGGCC 59.335 55.000 0.62 0.00 0.00 5.36
278 279 4.732106 CGGATCTGGCCGTAGTTC 57.268 61.111 0.00 0.00 46.07 3.01
279 280 1.299165 CGGATCTGGCCGTAGTTCG 60.299 63.158 0.00 0.00 46.07 3.95
280 281 1.814527 GGATCTGGCCGTAGTTCGT 59.185 57.895 0.00 0.00 37.94 3.85
281 282 0.248949 GGATCTGGCCGTAGTTCGTC 60.249 60.000 0.00 0.00 37.94 4.20
282 283 0.739561 GATCTGGCCGTAGTTCGTCT 59.260 55.000 0.00 0.00 37.94 4.18
283 284 1.945394 GATCTGGCCGTAGTTCGTCTA 59.055 52.381 0.00 0.00 37.94 2.59
284 285 1.089920 TCTGGCCGTAGTTCGTCTAC 58.910 55.000 0.00 9.32 43.87 2.59
285 286 1.093159 CTGGCCGTAGTTCGTCTACT 58.907 55.000 0.00 6.09 44.80 2.57
286 287 1.471684 CTGGCCGTAGTTCGTCTACTT 59.528 52.381 0.00 0.00 44.80 2.24
287 288 1.888512 TGGCCGTAGTTCGTCTACTTT 59.111 47.619 0.00 0.00 44.80 2.66
288 289 2.095059 TGGCCGTAGTTCGTCTACTTTC 60.095 50.000 0.00 7.41 44.80 2.62
289 290 2.095059 GGCCGTAGTTCGTCTACTTTCA 60.095 50.000 14.59 0.00 44.80 2.69
290 291 3.428589 GGCCGTAGTTCGTCTACTTTCAT 60.429 47.826 14.59 0.00 44.80 2.57
291 292 3.546670 GCCGTAGTTCGTCTACTTTCATG 59.453 47.826 14.59 0.00 44.80 3.07
292 293 4.730657 CCGTAGTTCGTCTACTTTCATGT 58.269 43.478 14.59 0.00 44.80 3.21
293 294 4.557690 CCGTAGTTCGTCTACTTTCATGTG 59.442 45.833 14.59 0.00 44.80 3.21
294 295 5.152097 CGTAGTTCGTCTACTTTCATGTGT 58.848 41.667 14.59 0.00 44.80 3.72
295 296 5.628193 CGTAGTTCGTCTACTTTCATGTGTT 59.372 40.000 14.59 0.00 44.80 3.32
296 297 6.143438 CGTAGTTCGTCTACTTTCATGTGTTT 59.857 38.462 14.59 0.00 44.80 2.83
297 298 6.920569 AGTTCGTCTACTTTCATGTGTTTT 57.079 33.333 0.00 0.00 0.00 2.43
298 299 6.945072 AGTTCGTCTACTTTCATGTGTTTTC 58.055 36.000 0.00 0.00 0.00 2.29
299 300 6.537301 AGTTCGTCTACTTTCATGTGTTTTCA 59.463 34.615 0.00 0.00 0.00 2.69
300 301 6.525121 TCGTCTACTTTCATGTGTTTTCAG 57.475 37.500 0.00 0.00 0.00 3.02
301 302 5.465390 TCGTCTACTTTCATGTGTTTTCAGG 59.535 40.000 0.00 0.00 0.00 3.86
302 303 5.236478 CGTCTACTTTCATGTGTTTTCAGGT 59.764 40.000 0.00 0.00 0.00 4.00
303 304 6.238374 CGTCTACTTTCATGTGTTTTCAGGTT 60.238 38.462 0.00 0.00 0.00 3.50
304 305 6.912591 GTCTACTTTCATGTGTTTTCAGGTTG 59.087 38.462 0.00 0.00 0.00 3.77
305 306 5.009854 ACTTTCATGTGTTTTCAGGTTGG 57.990 39.130 0.00 0.00 0.00 3.77
306 307 4.709397 ACTTTCATGTGTTTTCAGGTTGGA 59.291 37.500 0.00 0.00 0.00 3.53
307 308 5.363580 ACTTTCATGTGTTTTCAGGTTGGAT 59.636 36.000 0.00 0.00 0.00 3.41
308 309 5.452078 TTCATGTGTTTTCAGGTTGGATC 57.548 39.130 0.00 0.00 0.00 3.36
309 310 4.468713 TCATGTGTTTTCAGGTTGGATCA 58.531 39.130 0.00 0.00 0.00 2.92
310 311 5.078949 TCATGTGTTTTCAGGTTGGATCAT 58.921 37.500 0.00 0.00 0.00 2.45
311 312 5.539574 TCATGTGTTTTCAGGTTGGATCATT 59.460 36.000 0.00 0.00 0.00 2.57
312 313 5.452078 TGTGTTTTCAGGTTGGATCATTC 57.548 39.130 0.00 0.00 0.00 2.67
313 314 4.280677 TGTGTTTTCAGGTTGGATCATTCC 59.719 41.667 0.00 0.00 42.94 3.01
314 315 3.505680 TGTTTTCAGGTTGGATCATTCCG 59.494 43.478 0.00 0.00 45.89 4.30
315 316 3.712016 TTTCAGGTTGGATCATTCCGA 57.288 42.857 0.00 0.00 45.89 4.55
316 317 2.988010 TCAGGTTGGATCATTCCGAG 57.012 50.000 0.00 0.00 45.89 4.63
318 319 3.788672 GGTTGGATCATTCCGAGCT 57.211 52.632 4.54 0.00 46.44 4.09
319 320 2.910688 GGTTGGATCATTCCGAGCTA 57.089 50.000 4.54 0.00 46.44 3.32
320 321 2.484889 GGTTGGATCATTCCGAGCTAC 58.515 52.381 4.54 0.00 46.44 3.58
321 322 2.103263 GGTTGGATCATTCCGAGCTACT 59.897 50.000 4.54 0.00 46.44 2.57
322 323 3.385577 GTTGGATCATTCCGAGCTACTC 58.614 50.000 0.00 0.00 45.89 2.59
323 324 2.950781 TGGATCATTCCGAGCTACTCT 58.049 47.619 0.00 0.00 45.89 3.24
324 325 4.100279 TGGATCATTCCGAGCTACTCTA 57.900 45.455 0.00 0.00 45.89 2.43
325 326 3.821600 TGGATCATTCCGAGCTACTCTAC 59.178 47.826 0.00 0.00 45.89 2.59
326 327 4.076394 GGATCATTCCGAGCTACTCTACT 58.924 47.826 0.00 0.00 30.72 2.57
327 328 4.155280 GGATCATTCCGAGCTACTCTACTC 59.845 50.000 0.00 0.00 30.72 2.59
328 329 4.425180 TCATTCCGAGCTACTCTACTCT 57.575 45.455 0.00 0.00 0.00 3.24
329 330 4.783055 TCATTCCGAGCTACTCTACTCTT 58.217 43.478 0.00 0.00 0.00 2.85
330 331 4.817464 TCATTCCGAGCTACTCTACTCTTC 59.183 45.833 0.00 0.00 0.00 2.87
331 332 3.908643 TCCGAGCTACTCTACTCTTCA 57.091 47.619 0.00 0.00 0.00 3.02
332 333 4.425180 TCCGAGCTACTCTACTCTTCAT 57.575 45.455 0.00 0.00 0.00 2.57
333 334 4.382291 TCCGAGCTACTCTACTCTTCATC 58.618 47.826 0.00 0.00 0.00 2.92
334 335 3.185594 CCGAGCTACTCTACTCTTCATCG 59.814 52.174 0.00 0.00 0.00 3.84
335 336 3.185594 CGAGCTACTCTACTCTTCATCGG 59.814 52.174 0.00 0.00 0.00 4.18
336 337 2.882137 AGCTACTCTACTCTTCATCGGC 59.118 50.000 0.00 0.00 0.00 5.54
337 338 2.350007 GCTACTCTACTCTTCATCGGCG 60.350 54.545 0.00 0.00 0.00 6.46
338 339 1.025812 ACTCTACTCTTCATCGGCGG 58.974 55.000 7.21 0.00 0.00 6.13
339 340 0.318275 CTCTACTCTTCATCGGCGGC 60.318 60.000 7.21 0.00 0.00 6.53
340 341 1.658717 CTACTCTTCATCGGCGGCG 60.659 63.158 27.15 27.15 0.00 6.46
341 342 3.133767 TACTCTTCATCGGCGGCGG 62.134 63.158 31.73 16.54 0.00 6.13
342 343 4.514577 CTCTTCATCGGCGGCGGT 62.515 66.667 31.73 23.77 0.00 5.68
343 344 4.077184 TCTTCATCGGCGGCGGTT 62.077 61.111 31.73 16.58 0.00 4.44
344 345 3.864686 CTTCATCGGCGGCGGTTG 61.865 66.667 31.73 26.46 0.00 3.77
345 346 4.690719 TTCATCGGCGGCGGTTGT 62.691 61.111 31.73 12.34 0.00 3.32
346 347 4.690719 TCATCGGCGGCGGTTGTT 62.691 61.111 31.73 8.61 0.00 2.83
347 348 4.459331 CATCGGCGGCGGTTGTTG 62.459 66.667 31.73 16.47 0.00 3.33
352 353 4.025401 GCGGCGGTTGTTGTCCTG 62.025 66.667 9.78 0.00 0.00 3.86
353 354 4.025401 CGGCGGTTGTTGTCCTGC 62.025 66.667 0.00 0.00 0.00 4.85
354 355 2.594592 GGCGGTTGTTGTCCTGCT 60.595 61.111 0.00 0.00 0.00 4.24
355 356 2.639286 GCGGTTGTTGTCCTGCTG 59.361 61.111 0.00 0.00 0.00 4.41
356 357 2.639286 CGGTTGTTGTCCTGCTGC 59.361 61.111 0.00 0.00 0.00 5.25
357 358 2.639286 GGTTGTTGTCCTGCTGCG 59.361 61.111 0.00 0.00 0.00 5.18
358 359 2.050985 GTTGTTGTCCTGCTGCGC 60.051 61.111 0.00 0.00 0.00 6.09
359 360 2.203195 TTGTTGTCCTGCTGCGCT 60.203 55.556 9.73 0.00 0.00 5.92
360 361 2.545596 TTGTTGTCCTGCTGCGCTG 61.546 57.895 9.73 10.04 0.00 5.18
361 362 3.730761 GTTGTCCTGCTGCGCTGG 61.731 66.667 16.47 16.39 46.73 4.85
362 363 4.254709 TTGTCCTGCTGCGCTGGT 62.255 61.111 16.47 0.00 45.76 4.00
363 364 4.687215 TGTCCTGCTGCGCTGGTC 62.687 66.667 16.47 16.42 45.76 4.02
366 367 3.774528 CCTGCTGCGCTGGTCCTA 61.775 66.667 16.47 0.00 41.68 2.94
367 368 2.503061 CTGCTGCGCTGGTCCTAT 59.497 61.111 16.47 0.00 0.00 2.57
368 369 1.886313 CTGCTGCGCTGGTCCTATG 60.886 63.158 16.47 0.00 0.00 2.23
369 370 2.590007 GCTGCGCTGGTCCTATGG 60.590 66.667 16.47 0.00 0.00 2.74
370 371 3.094062 GCTGCGCTGGTCCTATGGA 62.094 63.158 16.47 0.00 0.00 3.41
371 372 1.068753 CTGCGCTGGTCCTATGGAG 59.931 63.158 9.73 0.00 29.39 3.86
372 373 1.680522 CTGCGCTGGTCCTATGGAGT 61.681 60.000 9.73 0.00 29.39 3.85
373 374 1.068250 GCGCTGGTCCTATGGAGTC 59.932 63.158 0.00 0.00 29.39 3.36
374 375 1.395826 GCGCTGGTCCTATGGAGTCT 61.396 60.000 0.00 0.00 29.39 3.24
375 376 1.115467 CGCTGGTCCTATGGAGTCTT 58.885 55.000 0.00 0.00 29.39 3.01
376 377 2.307768 CGCTGGTCCTATGGAGTCTTA 58.692 52.381 0.00 0.00 29.39 2.10
377 378 2.294791 CGCTGGTCCTATGGAGTCTTAG 59.705 54.545 0.00 0.00 29.39 2.18
378 379 2.036604 GCTGGTCCTATGGAGTCTTAGC 59.963 54.545 0.00 0.00 29.39 3.09
379 380 3.300388 CTGGTCCTATGGAGTCTTAGCA 58.700 50.000 0.00 0.00 29.39 3.49
380 381 3.031736 TGGTCCTATGGAGTCTTAGCAC 58.968 50.000 0.00 0.00 29.39 4.40
381 382 2.034812 GGTCCTATGGAGTCTTAGCACG 59.965 54.545 0.00 0.00 29.39 5.34
382 383 2.950309 GTCCTATGGAGTCTTAGCACGA 59.050 50.000 0.00 0.00 29.39 4.35
383 384 2.950309 TCCTATGGAGTCTTAGCACGAC 59.050 50.000 0.00 0.00 0.00 4.34
384 385 2.287069 CCTATGGAGTCTTAGCACGACG 60.287 54.545 0.00 0.00 36.53 5.12
385 386 1.460504 ATGGAGTCTTAGCACGACGA 58.539 50.000 0.00 0.00 36.53 4.20
386 387 0.520404 TGGAGTCTTAGCACGACGAC 59.480 55.000 0.00 0.00 36.53 4.34
387 388 0.803740 GGAGTCTTAGCACGACGACT 59.196 55.000 0.00 0.59 39.27 4.18
388 389 1.199558 GGAGTCTTAGCACGACGACTT 59.800 52.381 0.00 0.00 36.90 3.01
389 390 2.507866 GAGTCTTAGCACGACGACTTC 58.492 52.381 0.00 0.00 36.90 3.01
390 391 1.199558 AGTCTTAGCACGACGACTTCC 59.800 52.381 0.00 0.00 33.21 3.46
391 392 0.524862 TCTTAGCACGACGACTTCCC 59.475 55.000 0.00 0.00 0.00 3.97
392 393 0.797249 CTTAGCACGACGACTTCCCG 60.797 60.000 0.00 0.00 0.00 5.14
393 394 1.236616 TTAGCACGACGACTTCCCGA 61.237 55.000 0.00 0.00 0.00 5.14
394 395 1.028330 TAGCACGACGACTTCCCGAT 61.028 55.000 0.00 0.00 0.00 4.18
395 396 1.445582 GCACGACGACTTCCCGATT 60.446 57.895 0.00 0.00 0.00 3.34
396 397 1.683790 GCACGACGACTTCCCGATTG 61.684 60.000 0.00 0.00 0.00 2.67
397 398 0.388134 CACGACGACTTCCCGATTGT 60.388 55.000 0.00 0.00 0.00 2.71
398 399 0.109412 ACGACGACTTCCCGATTGTC 60.109 55.000 0.00 0.00 0.00 3.18
399 400 0.170561 CGACGACTTCCCGATTGTCT 59.829 55.000 0.00 0.00 0.00 3.41
400 401 1.399440 CGACGACTTCCCGATTGTCTA 59.601 52.381 0.00 0.00 0.00 2.59
401 402 2.033049 CGACGACTTCCCGATTGTCTAT 59.967 50.000 0.00 0.00 0.00 1.98
402 403 3.488721 CGACGACTTCCCGATTGTCTATT 60.489 47.826 0.00 0.00 0.00 1.73
403 404 4.260907 CGACGACTTCCCGATTGTCTATTA 60.261 45.833 0.00 0.00 0.00 0.98
404 405 4.929781 ACGACTTCCCGATTGTCTATTAC 58.070 43.478 0.00 0.00 0.00 1.89
405 406 4.400251 ACGACTTCCCGATTGTCTATTACA 59.600 41.667 0.00 0.00 35.88 2.41
418 419 6.079424 TGTCTATTACAACAAGTTTTGCCC 57.921 37.500 0.00 0.00 34.29 5.36
419 420 5.151389 GTCTATTACAACAAGTTTTGCCCG 58.849 41.667 0.00 0.00 0.00 6.13
420 421 2.873133 TTACAACAAGTTTTGCCCGG 57.127 45.000 0.00 0.00 0.00 5.73
421 422 0.386113 TACAACAAGTTTTGCCCGGC 59.614 50.000 1.04 1.04 0.00 6.13
422 423 1.326951 ACAACAAGTTTTGCCCGGCT 61.327 50.000 11.61 0.00 0.00 5.52
423 424 0.179086 CAACAAGTTTTGCCCGGCTT 60.179 50.000 11.61 0.00 0.00 4.35
424 425 0.539518 AACAAGTTTTGCCCGGCTTT 59.460 45.000 11.61 0.00 0.00 3.51
425 426 0.179086 ACAAGTTTTGCCCGGCTTTG 60.179 50.000 11.61 9.67 0.00 2.77
426 427 0.879839 CAAGTTTTGCCCGGCTTTGG 60.880 55.000 11.61 0.00 0.00 3.28
436 437 2.124942 GGCTTTGGCGAGGGAGAG 60.125 66.667 0.00 0.00 39.81 3.20
437 438 2.660064 GGCTTTGGCGAGGGAGAGA 61.660 63.158 0.00 0.00 39.81 3.10
438 439 1.448717 GCTTTGGCGAGGGAGAGAC 60.449 63.158 0.00 0.00 0.00 3.36
439 440 1.975327 CTTTGGCGAGGGAGAGACA 59.025 57.895 0.00 0.00 0.00 3.41
440 441 0.321671 CTTTGGCGAGGGAGAGACAA 59.678 55.000 0.00 0.00 0.00 3.18
441 442 0.984230 TTTGGCGAGGGAGAGACAAT 59.016 50.000 0.00 0.00 0.00 2.71
442 443 0.250234 TTGGCGAGGGAGAGACAATG 59.750 55.000 0.00 0.00 0.00 2.82
443 444 0.614697 TGGCGAGGGAGAGACAATGA 60.615 55.000 0.00 0.00 0.00 2.57
444 445 0.179097 GGCGAGGGAGAGACAATGAC 60.179 60.000 0.00 0.00 0.00 3.06
445 446 0.526524 GCGAGGGAGAGACAATGACG 60.527 60.000 0.00 0.00 0.00 4.35
446 447 0.101399 CGAGGGAGAGACAATGACGG 59.899 60.000 0.00 0.00 0.00 4.79
447 448 0.179097 GAGGGAGAGACAATGACGGC 60.179 60.000 0.00 0.00 0.00 5.68
448 449 1.519455 GGGAGAGACAATGACGGCG 60.519 63.158 4.80 4.80 0.00 6.46
449 450 1.519455 GGAGAGACAATGACGGCGG 60.519 63.158 13.24 0.00 0.00 6.13
450 451 2.125512 AGAGACAATGACGGCGGC 60.126 61.111 13.24 9.67 0.00 6.53
451 452 3.554692 GAGACAATGACGGCGGCG 61.555 66.667 31.06 31.06 0.00 6.46
468 469 4.581648 GCGCATTCGGCTCGCTTC 62.582 66.667 0.30 0.00 44.79 3.86
469 470 4.271170 CGCATTCGGCTCGCTTCG 62.271 66.667 0.00 0.00 41.67 3.79
470 471 3.929948 GCATTCGGCTCGCTTCGG 61.930 66.667 0.00 0.00 40.25 4.30
471 472 2.509336 CATTCGGCTCGCTTCGGT 60.509 61.111 0.00 0.00 0.00 4.69
472 473 2.509336 ATTCGGCTCGCTTCGGTG 60.509 61.111 0.00 0.00 0.00 4.94
476 477 3.793144 GGCTCGCTTCGGTGCTTG 61.793 66.667 0.00 0.00 0.00 4.01
477 478 3.044305 GCTCGCTTCGGTGCTTGT 61.044 61.111 0.00 0.00 0.00 3.16
478 479 1.736645 GCTCGCTTCGGTGCTTGTA 60.737 57.895 0.00 0.00 0.00 2.41
479 480 1.687494 GCTCGCTTCGGTGCTTGTAG 61.687 60.000 0.00 0.00 0.00 2.74
480 481 0.388649 CTCGCTTCGGTGCTTGTAGT 60.389 55.000 0.00 0.00 0.00 2.73
481 482 0.388134 TCGCTTCGGTGCTTGTAGTC 60.388 55.000 0.00 0.00 0.00 2.59
482 483 1.674611 CGCTTCGGTGCTTGTAGTCG 61.675 60.000 0.00 0.00 0.00 4.18
483 484 0.666577 GCTTCGGTGCTTGTAGTCGT 60.667 55.000 0.00 0.00 0.00 4.34
484 485 1.337821 CTTCGGTGCTTGTAGTCGTC 58.662 55.000 0.00 0.00 0.00 4.20
485 486 0.386352 TTCGGTGCTTGTAGTCGTCG 60.386 55.000 0.00 0.00 0.00 5.12
486 487 2.434134 CGGTGCTTGTAGTCGTCGC 61.434 63.158 0.00 0.00 0.00 5.19
487 488 1.080705 GGTGCTTGTAGTCGTCGCT 60.081 57.895 0.00 0.00 0.00 4.93
488 489 0.169672 GGTGCTTGTAGTCGTCGCTA 59.830 55.000 0.00 0.00 0.00 4.26
489 490 1.536149 GTGCTTGTAGTCGTCGCTAG 58.464 55.000 0.00 0.00 0.00 3.42
490 491 0.450583 TGCTTGTAGTCGTCGCTAGG 59.549 55.000 0.00 0.00 0.00 3.02
491 492 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
492 493 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
493 494 1.736126 CTTGTAGTCGTCGCTAGGTGA 59.264 52.381 0.00 0.00 0.00 4.02
494 495 1.812235 TGTAGTCGTCGCTAGGTGAA 58.188 50.000 0.00 0.00 0.00 3.18
495 496 2.153645 TGTAGTCGTCGCTAGGTGAAA 58.846 47.619 0.00 0.00 0.00 2.69
496 497 2.553602 TGTAGTCGTCGCTAGGTGAAAA 59.446 45.455 0.00 0.00 0.00 2.29
497 498 2.806608 AGTCGTCGCTAGGTGAAAAA 57.193 45.000 0.00 0.00 0.00 1.94
523 524 8.934507 AAATACTATGAGAGGAAGTTTTCTCG 57.065 34.615 11.48 3.55 42.14 4.04
524 525 7.883391 ATACTATGAGAGGAAGTTTTCTCGA 57.117 36.000 11.48 0.00 42.14 4.04
525 526 6.591750 ACTATGAGAGGAAGTTTTCTCGAA 57.408 37.500 11.48 4.29 42.14 3.71
526 527 6.994221 ACTATGAGAGGAAGTTTTCTCGAAA 58.006 36.000 11.48 0.00 42.14 3.46
527 528 7.442656 ACTATGAGAGGAAGTTTTCTCGAAAA 58.557 34.615 11.48 0.93 42.14 2.29
528 529 7.931948 ACTATGAGAGGAAGTTTTCTCGAAAAA 59.068 33.333 6.41 0.00 42.14 1.94
550 551 8.831715 AAAAACAAAATCAACTATGGACATCC 57.168 30.769 0.00 0.00 0.00 3.51
629 641 2.233271 CCTCCAATTTCCATGGGATCG 58.767 52.381 13.02 0.00 38.54 3.69
689 701 8.401709 AGAAAAGAAGTTAAGAAAAGACTGCTG 58.598 33.333 0.00 0.00 29.73 4.41
780 795 2.997315 CCTGCGAGTCCTGTCCCA 60.997 66.667 0.00 0.00 0.00 4.37
825 840 2.304056 CCTGCTGACCCCACATCCT 61.304 63.158 0.00 0.00 0.00 3.24
943 972 0.239082 CTAAAACCCGCGTCCAAACC 59.761 55.000 4.92 0.00 0.00 3.27
973 1002 4.380023 GGCACTACCAGCTTAGATAGATCG 60.380 50.000 0.00 0.00 38.86 3.69
974 1003 4.456222 GCACTACCAGCTTAGATAGATCGA 59.544 45.833 0.00 0.00 0.00 3.59
975 1004 5.124776 GCACTACCAGCTTAGATAGATCGAT 59.875 44.000 0.00 0.00 0.00 3.59
976 1005 6.676943 GCACTACCAGCTTAGATAGATCGATC 60.677 46.154 17.91 17.91 0.00 3.69
1427 1456 2.278206 CGATCTGGACGAGCGTGG 60.278 66.667 0.00 0.00 45.82 4.94
1540 1569 4.824515 AGGAGGAGGAGGACGCCG 62.825 72.222 0.00 0.00 44.78 6.46
1819 1854 1.109920 TAGACCCGATCAGGAGCAGC 61.110 60.000 0.76 0.00 45.00 5.25
1821 1856 4.598894 CCCGATCAGGAGCAGCCG 62.599 72.222 5.32 0.00 45.00 5.52
2357 2395 0.938713 CGCGACAGGGTACAAACAAA 59.061 50.000 0.00 0.00 0.00 2.83
2411 2449 0.671796 TGACACGACGATGGTGACTT 59.328 50.000 0.00 0.00 38.73 3.01
2412 2450 1.881324 TGACACGACGATGGTGACTTA 59.119 47.619 0.00 0.00 38.73 2.24
2413 2451 2.248487 GACACGACGATGGTGACTTAC 58.752 52.381 0.00 0.00 38.73 2.34
2414 2452 1.884579 ACACGACGATGGTGACTTACT 59.115 47.619 0.00 0.00 38.73 2.24
2415 2453 2.251040 CACGACGATGGTGACTTACTG 58.749 52.381 0.00 0.00 37.60 2.74
2416 2454 2.095415 CACGACGATGGTGACTTACTGA 60.095 50.000 0.00 0.00 37.60 3.41
2417 2455 2.095364 ACGACGATGGTGACTTACTGAC 60.095 50.000 0.00 0.00 0.00 3.51
2418 2456 2.161808 CGACGATGGTGACTTACTGACT 59.838 50.000 0.00 0.00 0.00 3.41
2979 3028 4.818546 AGGTATGTGCAGACATGATTAAGC 59.181 41.667 0.00 0.00 43.03 3.09
2980 3029 4.576053 GGTATGTGCAGACATGATTAAGCA 59.424 41.667 0.00 0.00 43.03 3.91
2984 3033 3.191162 GTGCAGACATGATTAAGCACCAA 59.809 43.478 16.58 0.00 44.68 3.67
2986 3035 4.142337 TGCAGACATGATTAAGCACCAATG 60.142 41.667 0.00 0.00 0.00 2.82
3029 3085 1.125021 CGTGAGCATGAGTGAACGAAC 59.875 52.381 0.00 0.00 33.06 3.95
3164 3220 2.882876 GCTACGAGAGCCGGACAA 59.117 61.111 5.05 0.00 46.41 3.18
3356 3412 0.313357 GGTCGGAGTATACGGGAAGC 59.687 60.000 0.00 0.00 0.00 3.86
3358 3414 0.184451 TCGGAGTATACGGGAAGCCT 59.816 55.000 0.00 0.00 0.00 4.58
3538 3594 3.086733 GCACCTAGCAATCACCTCC 57.913 57.895 0.00 0.00 44.79 4.30
3539 3595 0.811616 GCACCTAGCAATCACCTCCG 60.812 60.000 0.00 0.00 44.79 4.63
3550 3629 0.460109 TCACCTCCGCGACATTGATG 60.460 55.000 8.23 0.00 0.00 3.07
3555 3634 0.177836 TCCGCGACATTGATGGATGT 59.822 50.000 8.23 0.00 42.68 3.06
3561 3645 3.058708 GCGACATTGATGGATGTACATGG 60.059 47.826 14.43 0.00 40.21 3.66
3742 3826 3.257561 CCTTCTGCACGCCGATCG 61.258 66.667 8.51 8.51 45.38 3.69
3774 3858 4.457834 AAGATAAAGGACAGGTCAGTCG 57.542 45.455 1.41 0.00 39.42 4.18
3785 3869 1.373999 GTCAGTCGCTGCTCTGCTT 60.374 57.895 13.95 0.00 0.00 3.91
3805 3889 4.624125 GCTTACTTCTACTTCAGCCATGGT 60.624 45.833 14.67 0.00 0.00 3.55
3819 3904 1.677820 CCATGGTCGGTTCAGGGTTAC 60.678 57.143 2.57 0.00 32.07 2.50
3996 4081 2.354203 GCTCACCTTCTCCAAGAACGAT 60.354 50.000 0.00 0.00 29.89 3.73
3997 4082 3.257393 CTCACCTTCTCCAAGAACGATG 58.743 50.000 0.00 0.00 29.89 3.84
4033 4118 0.529773 CGAGAAATCGGATTGGCGGA 60.530 55.000 3.59 0.00 0.00 5.54
4061 4146 2.396157 CCGCCGAGCCAACCTAAAC 61.396 63.158 0.00 0.00 0.00 2.01
4180 4265 7.570132 TGGTTAGCATTAATGTAGTATGTGGT 58.430 34.615 16.61 0.00 0.00 4.16
4183 4268 8.985805 GTTAGCATTAATGTAGTATGTGGTACC 58.014 37.037 16.61 4.43 33.58 3.34
4184 4269 7.131907 AGCATTAATGTAGTATGTGGTACCA 57.868 36.000 11.60 11.60 33.58 3.25
4212 4297 5.681639 ACTACCCTACAAATAAGACATGGC 58.318 41.667 0.00 0.00 0.00 4.40
4300 4385 3.330701 AGTTCAAATACTTGCTCCCTCCA 59.669 43.478 0.00 0.00 32.14 3.86
4302 4387 3.686016 TCAAATACTTGCTCCCTCCAAC 58.314 45.455 0.00 0.00 32.14 3.77
4317 4402 4.080015 CCCTCCAACCCATAATAAGTGTCA 60.080 45.833 0.00 0.00 0.00 3.58
4329 4414 8.567948 CCATAATAAGTGTCACAGTTTTGAACT 58.432 33.333 2.42 0.00 44.06 3.01
4332 4417 8.732746 AATAAGTGTCACAGTTTTGAACTACT 57.267 30.769 2.42 0.00 40.46 2.57
4333 4418 6.663944 AAGTGTCACAGTTTTGAACTACTC 57.336 37.500 5.62 0.00 40.46 2.59
4334 4419 5.116882 AGTGTCACAGTTTTGAACTACTCC 58.883 41.667 5.62 0.00 40.46 3.85
4335 4420 4.873827 GTGTCACAGTTTTGAACTACTCCA 59.126 41.667 0.00 0.00 40.46 3.86
4337 4422 5.116882 GTCACAGTTTTGAACTACTCCAGT 58.883 41.667 0.00 0.00 40.46 4.00
4355 4516 4.937620 TCCAGTTGCTAGCAAATCAGTTAG 59.062 41.667 30.83 16.30 37.70 2.34
4359 4520 7.280876 CCAGTTGCTAGCAAATCAGTTAGATTA 59.719 37.037 30.83 1.43 46.09 1.75
4360 4521 8.333908 CAGTTGCTAGCAAATCAGTTAGATTAG 58.666 37.037 30.83 10.04 46.09 1.73
4387 4549 6.824305 AGTTAAATCAATGTTGAGTCCAGG 57.176 37.500 1.65 0.00 41.08 4.45
4460 4625 7.095565 ATGTGCACATCAATTGTTACAACAATG 60.096 33.333 26.61 11.39 44.18 2.82
4473 4638 6.971527 TTACAACAATGTAAGGTATCCACG 57.028 37.500 0.00 0.00 44.90 4.94
4484 4649 0.390860 GTATCCACGGCAGATGCTCT 59.609 55.000 4.59 0.00 41.70 4.09
4527 4692 8.632679 CAACCACTGGCATATCTTTATACAAAT 58.367 33.333 0.00 0.00 0.00 2.32
4569 4734 3.986277 TCTCTTTTACAGAACCACGACC 58.014 45.455 0.00 0.00 0.00 4.79
4584 4749 2.618185 ACCCATGGTGCCTCCCAT 60.618 61.111 11.73 0.00 46.28 4.00
4663 4830 6.430000 GTGCCTTCTGGTTCATCTTTAGTTTA 59.570 38.462 0.00 0.00 35.27 2.01
4680 4847 9.603921 CTTTAGTTTACCTCCATAAATCGGTAA 57.396 33.333 0.00 0.00 39.51 2.85
4739 4906 1.228124 TTGCAGCTAGCCCGTTTGT 60.228 52.632 12.13 0.00 44.83 2.83
4762 4929 1.394917 CGGCATGTGACTGTAAAGAGC 59.605 52.381 0.00 0.00 0.00 4.09
4767 4934 4.814147 CATGTGACTGTAAAGAGCTCTGA 58.186 43.478 19.06 5.66 0.00 3.27
4875 5042 2.496899 TGAATTCCTCCCTCACTTGC 57.503 50.000 2.27 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.636764 ACGCACATACACTCATCCTATGA 59.363 43.478 0.00 0.00 37.76 2.15
4 5 3.737774 CACGCACATACACTCATCCTATG 59.262 47.826 0.00 0.00 0.00 2.23
5 6 3.636764 TCACGCACATACACTCATCCTAT 59.363 43.478 0.00 0.00 0.00 2.57
6 7 3.020984 TCACGCACATACACTCATCCTA 58.979 45.455 0.00 0.00 0.00 2.94
7 8 1.824852 TCACGCACATACACTCATCCT 59.175 47.619 0.00 0.00 0.00 3.24
8 9 2.196749 CTCACGCACATACACTCATCC 58.803 52.381 0.00 0.00 0.00 3.51
9 10 1.590238 GCTCACGCACATACACTCATC 59.410 52.381 0.00 0.00 35.78 2.92
10 11 1.066929 TGCTCACGCACATACACTCAT 60.067 47.619 0.00 0.00 42.25 2.90
11 12 0.316841 TGCTCACGCACATACACTCA 59.683 50.000 0.00 0.00 42.25 3.41
12 13 3.122150 TGCTCACGCACATACACTC 57.878 52.632 0.00 0.00 42.25 3.51
22 23 6.869421 AAAATACAATACAAATGCTCACGC 57.131 33.333 0.00 0.00 0.00 5.34
61 62 3.883744 AAACAGAGCCCTCACGCCG 62.884 63.158 0.00 0.00 0.00 6.46
62 63 1.578206 GAAAACAGAGCCCTCACGCC 61.578 60.000 0.00 0.00 0.00 5.68
63 64 0.884704 TGAAAACAGAGCCCTCACGC 60.885 55.000 0.00 0.00 0.00 5.34
64 65 1.151668 CTGAAAACAGAGCCCTCACG 58.848 55.000 0.00 0.00 0.00 4.35
65 66 2.262423 ACTGAAAACAGAGCCCTCAC 57.738 50.000 0.00 0.00 0.00 3.51
66 67 2.092429 ACAACTGAAAACAGAGCCCTCA 60.092 45.455 0.00 0.00 0.00 3.86
67 68 2.576615 ACAACTGAAAACAGAGCCCTC 58.423 47.619 0.00 0.00 0.00 4.30
68 69 2.736670 ACAACTGAAAACAGAGCCCT 57.263 45.000 0.00 0.00 0.00 5.19
69 70 3.381590 AGAAACAACTGAAAACAGAGCCC 59.618 43.478 0.00 0.00 0.00 5.19
70 71 4.639135 AGAAACAACTGAAAACAGAGCC 57.361 40.909 0.00 0.00 0.00 4.70
71 72 4.730521 CGAAGAAACAACTGAAAACAGAGC 59.269 41.667 0.00 0.00 0.00 4.09
72 73 4.730521 GCGAAGAAACAACTGAAAACAGAG 59.269 41.667 0.00 0.00 0.00 3.35
73 74 4.658071 GCGAAGAAACAACTGAAAACAGA 58.342 39.130 0.00 0.00 0.00 3.41
74 75 3.478516 CGCGAAGAAACAACTGAAAACAG 59.521 43.478 0.00 0.00 0.00 3.16
75 76 3.120130 ACGCGAAGAAACAACTGAAAACA 60.120 39.130 15.93 0.00 0.00 2.83
76 77 3.422655 ACGCGAAGAAACAACTGAAAAC 58.577 40.909 15.93 0.00 0.00 2.43
77 78 3.750639 ACGCGAAGAAACAACTGAAAA 57.249 38.095 15.93 0.00 0.00 2.29
78 79 3.750639 AACGCGAAGAAACAACTGAAA 57.249 38.095 15.93 0.00 0.00 2.69
79 80 3.750639 AAACGCGAAGAAACAACTGAA 57.249 38.095 15.93 0.00 0.00 3.02
80 81 3.120130 ACAAAACGCGAAGAAACAACTGA 60.120 39.130 15.93 0.00 0.00 3.41
81 82 3.168193 ACAAAACGCGAAGAAACAACTG 58.832 40.909 15.93 0.00 0.00 3.16
82 83 3.481112 ACAAAACGCGAAGAAACAACT 57.519 38.095 15.93 0.00 0.00 3.16
83 84 4.315217 CGTAACAAAACGCGAAGAAACAAC 60.315 41.667 15.93 0.66 35.87 3.32
84 85 3.779758 CGTAACAAAACGCGAAGAAACAA 59.220 39.130 15.93 0.00 35.87 2.83
85 86 3.061831 TCGTAACAAAACGCGAAGAAACA 59.938 39.130 15.93 0.00 42.56 2.83
86 87 3.596319 TCGTAACAAAACGCGAAGAAAC 58.404 40.909 15.93 0.68 42.56 2.78
87 88 3.921969 TCGTAACAAAACGCGAAGAAA 57.078 38.095 15.93 0.00 42.56 2.52
88 89 4.455917 AATCGTAACAAAACGCGAAGAA 57.544 36.364 15.93 0.00 42.56 2.52
89 90 4.205334 CAAATCGTAACAAAACGCGAAGA 58.795 39.130 15.93 0.00 42.56 2.87
90 91 3.963724 ACAAATCGTAACAAAACGCGAAG 59.036 39.130 15.93 1.12 42.56 3.79
91 92 3.719840 CACAAATCGTAACAAAACGCGAA 59.280 39.130 15.93 0.00 42.56 4.70
92 93 3.242349 ACACAAATCGTAACAAAACGCGA 60.242 39.130 15.93 0.00 42.56 5.87
93 94 3.030441 ACACAAATCGTAACAAAACGCG 58.970 40.909 3.53 3.53 42.56 6.01
94 95 4.731480 AGAACACAAATCGTAACAAAACGC 59.269 37.500 0.00 0.00 42.56 4.84
95 96 5.330498 GCAGAACACAAATCGTAACAAAACG 60.330 40.000 0.00 0.00 44.19 3.60
96 97 5.741982 AGCAGAACACAAATCGTAACAAAAC 59.258 36.000 0.00 0.00 0.00 2.43
97 98 5.885881 AGCAGAACACAAATCGTAACAAAA 58.114 33.333 0.00 0.00 0.00 2.44
98 99 5.065346 TGAGCAGAACACAAATCGTAACAAA 59.935 36.000 0.00 0.00 0.00 2.83
99 100 4.572795 TGAGCAGAACACAAATCGTAACAA 59.427 37.500 0.00 0.00 0.00 2.83
100 101 4.123506 TGAGCAGAACACAAATCGTAACA 58.876 39.130 0.00 0.00 0.00 2.41
101 102 4.377431 CCTGAGCAGAACACAAATCGTAAC 60.377 45.833 0.00 0.00 0.00 2.50
102 103 3.745975 CCTGAGCAGAACACAAATCGTAA 59.254 43.478 0.00 0.00 0.00 3.18
103 104 3.006430 TCCTGAGCAGAACACAAATCGTA 59.994 43.478 0.00 0.00 0.00 3.43
104 105 2.146342 CCTGAGCAGAACACAAATCGT 58.854 47.619 0.00 0.00 0.00 3.73
105 106 2.416747 TCCTGAGCAGAACACAAATCG 58.583 47.619 0.00 0.00 0.00 3.34
106 107 4.067896 TCTTCCTGAGCAGAACACAAATC 58.932 43.478 0.00 0.00 0.00 2.17
107 108 3.817647 GTCTTCCTGAGCAGAACACAAAT 59.182 43.478 0.00 0.00 0.00 2.32
108 109 3.206150 GTCTTCCTGAGCAGAACACAAA 58.794 45.455 0.00 0.00 0.00 2.83
109 110 2.803133 CGTCTTCCTGAGCAGAACACAA 60.803 50.000 0.00 0.00 0.00 3.33
110 111 1.269778 CGTCTTCCTGAGCAGAACACA 60.270 52.381 0.00 0.00 0.00 3.72
111 112 1.000163 TCGTCTTCCTGAGCAGAACAC 60.000 52.381 0.00 0.00 0.00 3.32
112 113 1.270826 CTCGTCTTCCTGAGCAGAACA 59.729 52.381 0.00 0.00 0.00 3.18
113 114 1.542030 TCTCGTCTTCCTGAGCAGAAC 59.458 52.381 0.00 0.00 32.20 3.01
114 115 1.542030 GTCTCGTCTTCCTGAGCAGAA 59.458 52.381 0.00 0.00 32.20 3.02
115 116 1.169577 GTCTCGTCTTCCTGAGCAGA 58.830 55.000 0.00 0.00 32.20 4.26
116 117 0.179176 CGTCTCGTCTTCCTGAGCAG 60.179 60.000 0.00 0.00 32.20 4.24
117 118 1.587043 CCGTCTCGTCTTCCTGAGCA 61.587 60.000 0.00 0.00 32.20 4.26
118 119 1.137825 CCGTCTCGTCTTCCTGAGC 59.862 63.158 0.00 0.00 32.20 4.26
119 120 1.137825 GCCGTCTCGTCTTCCTGAG 59.862 63.158 0.00 0.00 0.00 3.35
120 121 2.687805 CGCCGTCTCGTCTTCCTGA 61.688 63.158 0.00 0.00 0.00 3.86
121 122 2.202492 CGCCGTCTCGTCTTCCTG 60.202 66.667 0.00 0.00 0.00 3.86
122 123 3.441290 CCGCCGTCTCGTCTTCCT 61.441 66.667 0.00 0.00 0.00 3.36
137 138 3.854669 ATCTTCAGGGAGCCGCCG 61.855 66.667 0.00 0.00 37.63 6.46
138 139 1.686325 TACATCTTCAGGGAGCCGCC 61.686 60.000 0.00 0.00 0.00 6.13
139 140 0.249657 CTACATCTTCAGGGAGCCGC 60.250 60.000 0.00 0.00 0.00 6.53
140 141 1.115467 ACTACATCTTCAGGGAGCCG 58.885 55.000 0.00 0.00 0.00 5.52
141 142 4.101741 ACATTACTACATCTTCAGGGAGCC 59.898 45.833 0.00 0.00 0.00 4.70
142 143 5.283457 ACATTACTACATCTTCAGGGAGC 57.717 43.478 0.00 0.00 0.00 4.70
143 144 7.118496 AGAACATTACTACATCTTCAGGGAG 57.882 40.000 0.00 0.00 0.00 4.30
144 145 7.364762 GGAAGAACATTACTACATCTTCAGGGA 60.365 40.741 13.81 0.00 44.86 4.20
145 146 6.763610 GGAAGAACATTACTACATCTTCAGGG 59.236 42.308 13.81 0.00 44.86 4.45
146 147 6.763610 GGGAAGAACATTACTACATCTTCAGG 59.236 42.308 13.81 0.00 44.86 3.86
147 148 6.477033 CGGGAAGAACATTACTACATCTTCAG 59.523 42.308 13.81 5.54 44.86 3.02
148 149 6.338146 CGGGAAGAACATTACTACATCTTCA 58.662 40.000 13.81 0.00 44.86 3.02
149 150 5.234543 GCGGGAAGAACATTACTACATCTTC 59.765 44.000 5.49 5.49 43.23 2.87
150 151 5.116882 GCGGGAAGAACATTACTACATCTT 58.883 41.667 0.00 0.00 33.28 2.40
151 152 4.443034 GGCGGGAAGAACATTACTACATCT 60.443 45.833 0.00 0.00 0.00 2.90
152 153 3.808174 GGCGGGAAGAACATTACTACATC 59.192 47.826 0.00 0.00 0.00 3.06
153 154 3.454812 AGGCGGGAAGAACATTACTACAT 59.545 43.478 0.00 0.00 0.00 2.29
154 155 2.835764 AGGCGGGAAGAACATTACTACA 59.164 45.455 0.00 0.00 0.00 2.74
155 156 3.538634 AGGCGGGAAGAACATTACTAC 57.461 47.619 0.00 0.00 0.00 2.73
156 157 3.069158 GCTAGGCGGGAAGAACATTACTA 59.931 47.826 0.00 0.00 0.00 1.82
157 158 2.158943 GCTAGGCGGGAAGAACATTACT 60.159 50.000 0.00 0.00 0.00 2.24
158 159 2.210961 GCTAGGCGGGAAGAACATTAC 58.789 52.381 0.00 0.00 0.00 1.89
159 160 1.140252 GGCTAGGCGGGAAGAACATTA 59.860 52.381 0.00 0.00 0.00 1.90
160 161 0.107165 GGCTAGGCGGGAAGAACATT 60.107 55.000 0.00 0.00 0.00 2.71
161 162 1.527370 GGCTAGGCGGGAAGAACAT 59.473 57.895 0.00 0.00 0.00 2.71
162 163 2.666098 GGGCTAGGCGGGAAGAACA 61.666 63.158 10.58 0.00 0.00 3.18
163 164 2.189784 GGGCTAGGCGGGAAGAAC 59.810 66.667 10.58 0.00 0.00 3.01
164 165 3.087906 GGGGCTAGGCGGGAAGAA 61.088 66.667 10.58 0.00 0.00 2.52
165 166 4.089757 AGGGGCTAGGCGGGAAGA 62.090 66.667 10.58 0.00 0.00 2.87
166 167 3.866582 CAGGGGCTAGGCGGGAAG 61.867 72.222 10.58 0.00 0.00 3.46
167 168 4.733725 ACAGGGGCTAGGCGGGAA 62.734 66.667 10.58 0.00 0.00 3.97
170 171 3.083997 AAGACAGGGGCTAGGCGG 61.084 66.667 10.58 5.00 0.00 6.13
171 172 1.690219 ATCAAGACAGGGGCTAGGCG 61.690 60.000 10.58 0.00 0.00 5.52
172 173 0.548510 AATCAAGACAGGGGCTAGGC 59.451 55.000 8.00 8.00 0.00 3.93
173 174 3.392616 ACATAATCAAGACAGGGGCTAGG 59.607 47.826 0.00 0.00 0.00 3.02
174 175 4.346418 AGACATAATCAAGACAGGGGCTAG 59.654 45.833 0.00 0.00 0.00 3.42
175 176 4.298626 AGACATAATCAAGACAGGGGCTA 58.701 43.478 0.00 0.00 0.00 3.93
176 177 3.118531 AGACATAATCAAGACAGGGGCT 58.881 45.455 0.00 0.00 0.00 5.19
177 178 3.135530 AGAGACATAATCAAGACAGGGGC 59.864 47.826 0.00 0.00 0.00 5.80
178 179 5.510520 GCTAGAGACATAATCAAGACAGGGG 60.511 48.000 0.00 0.00 0.00 4.79
179 180 5.069648 TGCTAGAGACATAATCAAGACAGGG 59.930 44.000 0.00 0.00 0.00 4.45
180 181 6.154203 TGCTAGAGACATAATCAAGACAGG 57.846 41.667 0.00 0.00 0.00 4.00
181 182 7.660112 AGATGCTAGAGACATAATCAAGACAG 58.340 38.462 0.00 0.00 0.00 3.51
182 183 7.594351 AGATGCTAGAGACATAATCAAGACA 57.406 36.000 0.00 0.00 0.00 3.41
183 184 7.325821 CGAAGATGCTAGAGACATAATCAAGAC 59.674 40.741 0.00 0.00 0.00 3.01
184 185 7.229506 TCGAAGATGCTAGAGACATAATCAAGA 59.770 37.037 0.00 0.00 0.00 3.02
185 186 7.366513 TCGAAGATGCTAGAGACATAATCAAG 58.633 38.462 0.00 0.00 0.00 3.02
186 187 7.277174 TCGAAGATGCTAGAGACATAATCAA 57.723 36.000 0.00 0.00 0.00 2.57
187 188 6.884280 TCGAAGATGCTAGAGACATAATCA 57.116 37.500 0.00 0.00 0.00 2.57
188 189 6.751425 CCATCGAAGATGCTAGAGACATAATC 59.249 42.308 4.60 0.00 45.12 1.75
189 190 6.350864 CCCATCGAAGATGCTAGAGACATAAT 60.351 42.308 4.60 0.00 45.12 1.28
190 191 5.047731 CCCATCGAAGATGCTAGAGACATAA 60.048 44.000 4.60 0.00 45.12 1.90
191 192 4.460731 CCCATCGAAGATGCTAGAGACATA 59.539 45.833 4.60 0.00 45.12 2.29
192 193 3.257873 CCCATCGAAGATGCTAGAGACAT 59.742 47.826 4.60 0.00 45.12 3.06
193 194 2.625314 CCCATCGAAGATGCTAGAGACA 59.375 50.000 4.60 0.00 45.12 3.41
194 195 2.625790 ACCCATCGAAGATGCTAGAGAC 59.374 50.000 4.60 0.00 45.12 3.36
195 196 2.625314 CACCCATCGAAGATGCTAGAGA 59.375 50.000 4.60 0.00 45.12 3.10
196 197 2.288702 CCACCCATCGAAGATGCTAGAG 60.289 54.545 4.60 0.00 45.12 2.43
197 198 1.688735 CCACCCATCGAAGATGCTAGA 59.311 52.381 4.60 0.00 45.12 2.43
198 199 1.270518 CCCACCCATCGAAGATGCTAG 60.271 57.143 4.60 0.00 45.12 3.42
199 200 0.758734 CCCACCCATCGAAGATGCTA 59.241 55.000 4.60 0.00 45.12 3.49
200 201 1.274703 ACCCACCCATCGAAGATGCT 61.275 55.000 4.60 0.00 45.12 3.79
201 202 1.097547 CACCCACCCATCGAAGATGC 61.098 60.000 4.60 0.00 45.12 3.91
202 203 0.464373 CCACCCACCCATCGAAGATG 60.464 60.000 3.21 3.21 45.12 2.90
203 204 0.620410 TCCACCCACCCATCGAAGAT 60.620 55.000 0.00 0.00 45.12 2.40
204 205 1.229368 TCCACCCACCCATCGAAGA 60.229 57.895 0.00 0.00 45.75 2.87
205 206 1.221840 CTCCACCCACCCATCGAAG 59.778 63.158 0.00 0.00 0.00 3.79
206 207 2.297895 CCTCCACCCACCCATCGAA 61.298 63.158 0.00 0.00 0.00 3.71
207 208 2.687200 CCTCCACCCACCCATCGA 60.687 66.667 0.00 0.00 0.00 3.59
208 209 3.009115 ACCTCCACCCACCCATCG 61.009 66.667 0.00 0.00 0.00 3.84
209 210 2.231380 ACACCTCCACCCACCCATC 61.231 63.158 0.00 0.00 0.00 3.51
210 211 2.121506 ACACCTCCACCCACCCAT 60.122 61.111 0.00 0.00 0.00 4.00
211 212 3.174987 CACACCTCCACCCACCCA 61.175 66.667 0.00 0.00 0.00 4.51
212 213 3.175710 ACACACCTCCACCCACCC 61.176 66.667 0.00 0.00 0.00 4.61
213 214 2.113243 GAGACACACCTCCACCCACC 62.113 65.000 0.00 0.00 0.00 4.61
214 215 1.371558 GAGACACACCTCCACCCAC 59.628 63.158 0.00 0.00 0.00 4.61
215 216 3.885814 GAGACACACCTCCACCCA 58.114 61.111 0.00 0.00 0.00 4.51
221 222 0.608640 ATTCACCGGAGACACACCTC 59.391 55.000 9.46 0.00 0.00 3.85
222 223 0.608640 GATTCACCGGAGACACACCT 59.391 55.000 9.46 0.00 0.00 4.00
223 224 0.608640 AGATTCACCGGAGACACACC 59.391 55.000 9.46 0.00 0.00 4.16
224 225 3.802948 ATAGATTCACCGGAGACACAC 57.197 47.619 9.46 0.00 0.00 3.82
225 226 6.280643 CAATAATAGATTCACCGGAGACACA 58.719 40.000 9.46 0.00 0.00 3.72
226 227 5.696724 CCAATAATAGATTCACCGGAGACAC 59.303 44.000 9.46 2.03 0.00 3.67
227 228 5.365605 ACCAATAATAGATTCACCGGAGACA 59.634 40.000 9.46 0.00 0.00 3.41
228 229 5.696724 CACCAATAATAGATTCACCGGAGAC 59.303 44.000 9.46 0.00 0.00 3.36
229 230 5.600898 TCACCAATAATAGATTCACCGGAGA 59.399 40.000 9.46 1.33 0.00 3.71
230 231 5.853936 TCACCAATAATAGATTCACCGGAG 58.146 41.667 9.46 0.00 0.00 4.63
231 232 5.880164 TCACCAATAATAGATTCACCGGA 57.120 39.130 9.46 0.00 0.00 5.14
232 233 7.510549 AATTCACCAATAATAGATTCACCGG 57.489 36.000 0.00 0.00 0.00 5.28
233 234 7.379529 GCAAATTCACCAATAATAGATTCACCG 59.620 37.037 0.00 0.00 0.00 4.94
234 235 8.416329 AGCAAATTCACCAATAATAGATTCACC 58.584 33.333 0.00 0.00 0.00 4.02
235 236 9.455847 GAGCAAATTCACCAATAATAGATTCAC 57.544 33.333 0.00 0.00 0.00 3.18
236 237 8.344831 CGAGCAAATTCACCAATAATAGATTCA 58.655 33.333 0.00 0.00 0.00 2.57
237 238 7.805071 CCGAGCAAATTCACCAATAATAGATTC 59.195 37.037 0.00 0.00 0.00 2.52
238 239 7.502226 TCCGAGCAAATTCACCAATAATAGATT 59.498 33.333 0.00 0.00 0.00 2.40
239 240 6.998074 TCCGAGCAAATTCACCAATAATAGAT 59.002 34.615 0.00 0.00 0.00 1.98
240 241 6.353323 TCCGAGCAAATTCACCAATAATAGA 58.647 36.000 0.00 0.00 0.00 1.98
241 242 6.618287 TCCGAGCAAATTCACCAATAATAG 57.382 37.500 0.00 0.00 0.00 1.73
242 243 6.998074 AGATCCGAGCAAATTCACCAATAATA 59.002 34.615 0.00 0.00 0.00 0.98
243 244 5.829924 AGATCCGAGCAAATTCACCAATAAT 59.170 36.000 0.00 0.00 0.00 1.28
244 245 5.066375 CAGATCCGAGCAAATTCACCAATAA 59.934 40.000 0.00 0.00 0.00 1.40
245 246 4.576053 CAGATCCGAGCAAATTCACCAATA 59.424 41.667 0.00 0.00 0.00 1.90
246 247 3.379372 CAGATCCGAGCAAATTCACCAAT 59.621 43.478 0.00 0.00 0.00 3.16
247 248 2.749076 CAGATCCGAGCAAATTCACCAA 59.251 45.455 0.00 0.00 0.00 3.67
248 249 2.358957 CAGATCCGAGCAAATTCACCA 58.641 47.619 0.00 0.00 0.00 4.17
249 250 1.672881 CCAGATCCGAGCAAATTCACC 59.327 52.381 0.00 0.00 0.00 4.02
250 251 1.064654 GCCAGATCCGAGCAAATTCAC 59.935 52.381 0.00 0.00 0.00 3.18
251 252 1.382522 GCCAGATCCGAGCAAATTCA 58.617 50.000 0.00 0.00 0.00 2.57
252 253 0.665298 GGCCAGATCCGAGCAAATTC 59.335 55.000 0.00 0.00 0.00 2.17
253 254 2.799176 GGCCAGATCCGAGCAAATT 58.201 52.632 0.00 0.00 0.00 1.82
254 255 4.567318 GGCCAGATCCGAGCAAAT 57.433 55.556 0.00 0.00 0.00 2.32
262 263 0.248949 GACGAACTACGGCCAGATCC 60.249 60.000 2.24 0.00 45.37 3.36
263 264 3.253416 GACGAACTACGGCCAGATC 57.747 57.895 2.24 0.00 45.37 2.75
273 274 7.707464 TGAAAACACATGAAAGTAGACGAACTA 59.293 33.333 0.00 0.00 0.00 2.24
274 275 6.537301 TGAAAACACATGAAAGTAGACGAACT 59.463 34.615 0.00 0.00 0.00 3.01
275 276 6.711579 TGAAAACACATGAAAGTAGACGAAC 58.288 36.000 0.00 0.00 0.00 3.95
276 277 6.018262 CCTGAAAACACATGAAAGTAGACGAA 60.018 38.462 0.00 0.00 0.00 3.85
277 278 5.465390 CCTGAAAACACATGAAAGTAGACGA 59.535 40.000 0.00 0.00 0.00 4.20
278 279 5.236478 ACCTGAAAACACATGAAAGTAGACG 59.764 40.000 0.00 0.00 0.00 4.18
279 280 6.619801 ACCTGAAAACACATGAAAGTAGAC 57.380 37.500 0.00 0.00 0.00 2.59
280 281 6.039270 CCAACCTGAAAACACATGAAAGTAGA 59.961 38.462 0.00 0.00 0.00 2.59
281 282 6.039270 TCCAACCTGAAAACACATGAAAGTAG 59.961 38.462 0.00 0.00 0.00 2.57
282 283 5.888724 TCCAACCTGAAAACACATGAAAGTA 59.111 36.000 0.00 0.00 0.00 2.24
283 284 4.709397 TCCAACCTGAAAACACATGAAAGT 59.291 37.500 0.00 0.00 0.00 2.66
284 285 5.261209 TCCAACCTGAAAACACATGAAAG 57.739 39.130 0.00 0.00 0.00 2.62
285 286 5.362143 TGATCCAACCTGAAAACACATGAAA 59.638 36.000 0.00 0.00 0.00 2.69
286 287 4.892345 TGATCCAACCTGAAAACACATGAA 59.108 37.500 0.00 0.00 0.00 2.57
287 288 4.468713 TGATCCAACCTGAAAACACATGA 58.531 39.130 0.00 0.00 0.00 3.07
288 289 4.852134 TGATCCAACCTGAAAACACATG 57.148 40.909 0.00 0.00 0.00 3.21
289 290 5.047092 GGAATGATCCAACCTGAAAACACAT 60.047 40.000 0.00 0.00 45.79 3.21
290 291 4.280677 GGAATGATCCAACCTGAAAACACA 59.719 41.667 0.00 0.00 45.79 3.72
291 292 4.615912 CGGAATGATCCAACCTGAAAACAC 60.616 45.833 0.00 0.00 46.97 3.32
292 293 3.505680 CGGAATGATCCAACCTGAAAACA 59.494 43.478 0.00 0.00 46.97 2.83
293 294 3.756434 TCGGAATGATCCAACCTGAAAAC 59.244 43.478 0.00 0.00 46.97 2.43
294 295 4.009675 CTCGGAATGATCCAACCTGAAAA 58.990 43.478 0.00 0.00 46.97 2.29
295 296 3.609853 CTCGGAATGATCCAACCTGAAA 58.390 45.455 0.00 0.00 46.97 2.69
296 297 2.680805 GCTCGGAATGATCCAACCTGAA 60.681 50.000 0.00 0.00 46.97 3.02
297 298 1.134401 GCTCGGAATGATCCAACCTGA 60.134 52.381 0.00 0.00 46.97 3.86
298 299 1.134280 AGCTCGGAATGATCCAACCTG 60.134 52.381 0.00 0.00 46.97 4.00
299 300 1.207791 AGCTCGGAATGATCCAACCT 58.792 50.000 0.00 0.00 46.97 3.50
300 301 2.103263 AGTAGCTCGGAATGATCCAACC 59.897 50.000 0.00 0.00 46.97 3.77
301 302 3.068873 AGAGTAGCTCGGAATGATCCAAC 59.931 47.826 0.00 0.00 46.97 3.77
302 303 3.300388 AGAGTAGCTCGGAATGATCCAA 58.700 45.455 0.00 0.00 46.97 3.53
303 304 2.950781 AGAGTAGCTCGGAATGATCCA 58.049 47.619 0.00 0.00 46.97 3.41
304 305 4.076394 AGTAGAGTAGCTCGGAATGATCC 58.924 47.826 0.00 0.00 42.80 3.36
305 306 5.001232 AGAGTAGAGTAGCTCGGAATGATC 58.999 45.833 0.00 0.00 36.88 2.92
306 307 4.980573 AGAGTAGAGTAGCTCGGAATGAT 58.019 43.478 0.00 0.00 36.88 2.45
307 308 4.425180 AGAGTAGAGTAGCTCGGAATGA 57.575 45.455 0.00 0.00 36.88 2.57
308 309 4.576873 TGAAGAGTAGAGTAGCTCGGAATG 59.423 45.833 0.00 0.00 36.88 2.67
309 310 4.783055 TGAAGAGTAGAGTAGCTCGGAAT 58.217 43.478 0.00 0.00 36.88 3.01
310 311 4.217836 TGAAGAGTAGAGTAGCTCGGAA 57.782 45.455 0.00 0.00 36.88 4.30
311 312 3.908643 TGAAGAGTAGAGTAGCTCGGA 57.091 47.619 0.00 0.00 36.88 4.55
312 313 3.185594 CGATGAAGAGTAGAGTAGCTCGG 59.814 52.174 0.00 0.00 36.88 4.63
313 314 3.185594 CCGATGAAGAGTAGAGTAGCTCG 59.814 52.174 0.00 0.00 36.88 5.03
314 315 3.058501 GCCGATGAAGAGTAGAGTAGCTC 60.059 52.174 0.00 0.00 0.00 4.09
315 316 2.882137 GCCGATGAAGAGTAGAGTAGCT 59.118 50.000 0.00 0.00 0.00 3.32
316 317 2.350007 CGCCGATGAAGAGTAGAGTAGC 60.350 54.545 0.00 0.00 0.00 3.58
317 318 2.224549 CCGCCGATGAAGAGTAGAGTAG 59.775 54.545 0.00 0.00 0.00 2.57
318 319 2.219458 CCGCCGATGAAGAGTAGAGTA 58.781 52.381 0.00 0.00 0.00 2.59
319 320 1.025812 CCGCCGATGAAGAGTAGAGT 58.974 55.000 0.00 0.00 0.00 3.24
320 321 0.318275 GCCGCCGATGAAGAGTAGAG 60.318 60.000 0.00 0.00 0.00 2.43
321 322 1.734137 GCCGCCGATGAAGAGTAGA 59.266 57.895 0.00 0.00 0.00 2.59
322 323 1.658717 CGCCGCCGATGAAGAGTAG 60.659 63.158 0.00 0.00 36.29 2.57
323 324 2.411701 CGCCGCCGATGAAGAGTA 59.588 61.111 0.00 0.00 36.29 2.59
324 325 4.514577 CCGCCGCCGATGAAGAGT 62.515 66.667 0.00 0.00 36.29 3.24
325 326 4.514577 ACCGCCGCCGATGAAGAG 62.515 66.667 0.00 0.00 36.29 2.85
326 327 4.077184 AACCGCCGCCGATGAAGA 62.077 61.111 0.00 0.00 36.29 2.87
327 328 3.864686 CAACCGCCGCCGATGAAG 61.865 66.667 0.00 0.00 36.29 3.02
328 329 4.690719 ACAACCGCCGCCGATGAA 62.691 61.111 0.00 0.00 36.29 2.57
329 330 4.690719 AACAACCGCCGCCGATGA 62.691 61.111 0.00 0.00 36.29 2.92
330 331 4.459331 CAACAACCGCCGCCGATG 62.459 66.667 0.00 0.00 36.29 3.84
335 336 4.025401 CAGGACAACAACCGCCGC 62.025 66.667 0.00 0.00 0.00 6.53
336 337 4.025401 GCAGGACAACAACCGCCG 62.025 66.667 0.00 0.00 0.00 6.46
337 338 2.594592 AGCAGGACAACAACCGCC 60.595 61.111 0.00 0.00 0.00 6.13
338 339 2.639286 CAGCAGGACAACAACCGC 59.361 61.111 0.00 0.00 0.00 5.68
339 340 2.639286 GCAGCAGGACAACAACCG 59.361 61.111 0.00 0.00 0.00 4.44
340 341 2.639286 CGCAGCAGGACAACAACC 59.361 61.111 0.00 0.00 0.00 3.77
353 354 1.068753 CTCCATAGGACCAGCGCAG 59.931 63.158 11.47 0.00 0.00 5.18
354 355 1.676678 GACTCCATAGGACCAGCGCA 61.677 60.000 11.47 0.00 0.00 6.09
355 356 1.068250 GACTCCATAGGACCAGCGC 59.932 63.158 0.00 0.00 0.00 5.92
356 357 1.115467 AAGACTCCATAGGACCAGCG 58.885 55.000 0.00 0.00 0.00 5.18
357 358 2.036604 GCTAAGACTCCATAGGACCAGC 59.963 54.545 0.00 0.00 0.00 4.85
358 359 3.068873 GTGCTAAGACTCCATAGGACCAG 59.931 52.174 0.00 0.00 35.26 4.00
359 360 3.031736 GTGCTAAGACTCCATAGGACCA 58.968 50.000 0.00 0.00 35.26 4.02
360 361 2.034812 CGTGCTAAGACTCCATAGGACC 59.965 54.545 0.00 0.00 37.23 4.46
361 362 2.950309 TCGTGCTAAGACTCCATAGGAC 59.050 50.000 0.00 0.00 37.19 3.85
362 363 2.950309 GTCGTGCTAAGACTCCATAGGA 59.050 50.000 0.00 0.00 35.84 2.94
363 364 2.287069 CGTCGTGCTAAGACTCCATAGG 60.287 54.545 5.54 0.00 36.53 2.57
364 365 2.612672 TCGTCGTGCTAAGACTCCATAG 59.387 50.000 0.00 0.00 36.53 2.23
365 366 2.353889 GTCGTCGTGCTAAGACTCCATA 59.646 50.000 0.00 0.00 36.53 2.74
366 367 1.132643 GTCGTCGTGCTAAGACTCCAT 59.867 52.381 0.00 0.00 36.53 3.41
367 368 0.520404 GTCGTCGTGCTAAGACTCCA 59.480 55.000 0.00 0.00 36.53 3.86
368 369 0.803740 AGTCGTCGTGCTAAGACTCC 59.196 55.000 0.00 0.00 39.49 3.85
369 370 2.507866 GAAGTCGTCGTGCTAAGACTC 58.492 52.381 0.00 0.00 42.42 3.36
370 371 1.199558 GGAAGTCGTCGTGCTAAGACT 59.800 52.381 0.00 0.00 44.81 3.24
371 372 1.615502 GGAAGTCGTCGTGCTAAGAC 58.384 55.000 0.00 0.00 35.41 3.01
372 373 0.524862 GGGAAGTCGTCGTGCTAAGA 59.475 55.000 0.00 0.00 0.00 2.10
373 374 0.797249 CGGGAAGTCGTCGTGCTAAG 60.797 60.000 0.00 0.00 0.00 2.18
374 375 1.210931 CGGGAAGTCGTCGTGCTAA 59.789 57.895 0.00 0.00 0.00 3.09
375 376 1.028330 ATCGGGAAGTCGTCGTGCTA 61.028 55.000 0.00 0.00 0.00 3.49
376 377 1.874345 AATCGGGAAGTCGTCGTGCT 61.874 55.000 0.00 0.00 0.00 4.40
377 378 1.445582 AATCGGGAAGTCGTCGTGC 60.446 57.895 0.00 0.00 0.00 5.34
378 379 0.388134 ACAATCGGGAAGTCGTCGTG 60.388 55.000 0.00 0.00 0.00 4.35
379 380 0.109412 GACAATCGGGAAGTCGTCGT 60.109 55.000 0.00 0.00 0.00 4.34
380 381 0.170561 AGACAATCGGGAAGTCGTCG 59.829 55.000 0.00 0.00 37.36 5.12
381 382 3.712091 ATAGACAATCGGGAAGTCGTC 57.288 47.619 0.00 0.00 37.36 4.20
382 383 4.400251 TGTAATAGACAATCGGGAAGTCGT 59.600 41.667 0.00 0.00 37.36 4.34
383 384 4.928601 TGTAATAGACAATCGGGAAGTCG 58.071 43.478 0.00 0.00 37.36 4.18
394 395 6.508777 GGGCAAAACTTGTTGTAATAGACAA 58.491 36.000 0.00 0.00 46.03 3.18
395 396 5.278071 CGGGCAAAACTTGTTGTAATAGACA 60.278 40.000 0.00 0.00 35.78 3.41
396 397 5.151389 CGGGCAAAACTTGTTGTAATAGAC 58.849 41.667 0.00 0.00 0.00 2.59
397 398 4.216687 CCGGGCAAAACTTGTTGTAATAGA 59.783 41.667 0.00 0.00 0.00 1.98
398 399 4.481463 CCGGGCAAAACTTGTTGTAATAG 58.519 43.478 0.00 0.00 0.00 1.73
399 400 3.305471 GCCGGGCAAAACTTGTTGTAATA 60.305 43.478 15.62 0.00 0.00 0.98
400 401 2.547007 GCCGGGCAAAACTTGTTGTAAT 60.547 45.455 15.62 0.00 0.00 1.89
401 402 1.202428 GCCGGGCAAAACTTGTTGTAA 60.202 47.619 15.62 0.00 0.00 2.41
402 403 0.386113 GCCGGGCAAAACTTGTTGTA 59.614 50.000 15.62 0.00 0.00 2.41
403 404 1.142965 GCCGGGCAAAACTTGTTGT 59.857 52.632 15.62 0.00 0.00 3.32
404 405 0.179086 AAGCCGGGCAAAACTTGTTG 60.179 50.000 23.09 0.00 0.00 3.33
405 406 0.539518 AAAGCCGGGCAAAACTTGTT 59.460 45.000 23.09 0.31 0.00 2.83
406 407 0.179086 CAAAGCCGGGCAAAACTTGT 60.179 50.000 23.09 0.00 0.00 3.16
407 408 0.879839 CCAAAGCCGGGCAAAACTTG 60.880 55.000 23.09 14.70 0.00 3.16
408 409 1.445518 CCAAAGCCGGGCAAAACTT 59.554 52.632 23.09 2.81 0.00 2.66
409 410 3.137687 CCAAAGCCGGGCAAAACT 58.862 55.556 23.09 0.00 0.00 2.66
418 419 4.082523 TCTCCCTCGCCAAAGCCG 62.083 66.667 0.00 0.00 34.57 5.52
419 420 2.124942 CTCTCCCTCGCCAAAGCC 60.125 66.667 0.00 0.00 34.57 4.35
420 421 1.448717 GTCTCTCCCTCGCCAAAGC 60.449 63.158 0.00 0.00 0.00 3.51
421 422 0.321671 TTGTCTCTCCCTCGCCAAAG 59.678 55.000 0.00 0.00 0.00 2.77
422 423 0.984230 ATTGTCTCTCCCTCGCCAAA 59.016 50.000 0.00 0.00 0.00 3.28
423 424 0.250234 CATTGTCTCTCCCTCGCCAA 59.750 55.000 0.00 0.00 0.00 4.52
424 425 0.614697 TCATTGTCTCTCCCTCGCCA 60.615 55.000 0.00 0.00 0.00 5.69
425 426 0.179097 GTCATTGTCTCTCCCTCGCC 60.179 60.000 0.00 0.00 0.00 5.54
426 427 0.526524 CGTCATTGTCTCTCCCTCGC 60.527 60.000 0.00 0.00 0.00 5.03
427 428 0.101399 CCGTCATTGTCTCTCCCTCG 59.899 60.000 0.00 0.00 0.00 4.63
428 429 0.179097 GCCGTCATTGTCTCTCCCTC 60.179 60.000 0.00 0.00 0.00 4.30
429 430 1.901085 GCCGTCATTGTCTCTCCCT 59.099 57.895 0.00 0.00 0.00 4.20
430 431 1.519455 CGCCGTCATTGTCTCTCCC 60.519 63.158 0.00 0.00 0.00 4.30
431 432 1.519455 CCGCCGTCATTGTCTCTCC 60.519 63.158 0.00 0.00 0.00 3.71
432 433 2.167861 GCCGCCGTCATTGTCTCTC 61.168 63.158 0.00 0.00 0.00 3.20
433 434 2.125512 GCCGCCGTCATTGTCTCT 60.126 61.111 0.00 0.00 0.00 3.10
434 435 3.554692 CGCCGCCGTCATTGTCTC 61.555 66.667 0.00 0.00 0.00 3.36
453 454 3.929948 CCGAAGCGAGCCGAATGC 61.930 66.667 0.00 0.00 41.71 3.56
454 455 2.509336 ACCGAAGCGAGCCGAATG 60.509 61.111 0.00 0.00 0.00 2.67
455 456 2.509336 CACCGAAGCGAGCCGAAT 60.509 61.111 0.00 0.00 0.00 3.34
459 460 3.793144 CAAGCACCGAAGCGAGCC 61.793 66.667 0.00 0.00 40.15 4.70
460 461 1.687494 CTACAAGCACCGAAGCGAGC 61.687 60.000 0.00 0.00 40.15 5.03
461 462 0.388649 ACTACAAGCACCGAAGCGAG 60.389 55.000 0.00 0.00 40.15 5.03
462 463 0.388134 GACTACAAGCACCGAAGCGA 60.388 55.000 0.00 0.00 40.15 4.93
463 464 1.674611 CGACTACAAGCACCGAAGCG 61.675 60.000 0.00 0.00 40.15 4.68
464 465 0.666577 ACGACTACAAGCACCGAAGC 60.667 55.000 0.00 0.00 0.00 3.86
465 466 1.337821 GACGACTACAAGCACCGAAG 58.662 55.000 0.00 0.00 0.00 3.79
466 467 0.386352 CGACGACTACAAGCACCGAA 60.386 55.000 0.00 0.00 0.00 4.30
467 468 1.208358 CGACGACTACAAGCACCGA 59.792 57.895 0.00 0.00 0.00 4.69
468 469 2.434134 GCGACGACTACAAGCACCG 61.434 63.158 0.00 0.00 0.00 4.94
469 470 0.169672 TAGCGACGACTACAAGCACC 59.830 55.000 0.00 0.00 0.00 5.01
470 471 1.536149 CTAGCGACGACTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
471 472 0.450583 CCTAGCGACGACTACAAGCA 59.549 55.000 0.00 0.00 0.00 3.91
472 473 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
473 474 1.736126 TCACCTAGCGACGACTACAAG 59.264 52.381 0.00 0.00 0.00 3.16
474 475 1.812235 TCACCTAGCGACGACTACAA 58.188 50.000 0.00 0.00 0.00 2.41
475 476 1.812235 TTCACCTAGCGACGACTACA 58.188 50.000 0.00 0.00 0.00 2.74
476 477 2.907910 TTTCACCTAGCGACGACTAC 57.092 50.000 0.00 0.00 0.00 2.73
477 478 3.921119 TTTTTCACCTAGCGACGACTA 57.079 42.857 0.00 0.00 0.00 2.59
478 479 2.806608 TTTTTCACCTAGCGACGACT 57.193 45.000 0.00 0.00 0.00 4.18
497 498 9.372369 CGAGAAAACTTCCTCTCATAGTATTTT 57.628 33.333 0.00 0.00 38.40 1.82
498 499 8.750298 TCGAGAAAACTTCCTCTCATAGTATTT 58.250 33.333 0.00 0.00 38.40 1.40
499 500 8.294954 TCGAGAAAACTTCCTCTCATAGTATT 57.705 34.615 0.00 0.00 38.40 1.89
500 501 7.883391 TCGAGAAAACTTCCTCTCATAGTAT 57.117 36.000 0.00 0.00 38.40 2.12
501 502 7.698506 TTCGAGAAAACTTCCTCTCATAGTA 57.301 36.000 0.00 0.00 38.40 1.82
502 503 6.591750 TTCGAGAAAACTTCCTCTCATAGT 57.408 37.500 0.00 0.00 38.40 2.12
503 504 7.891183 TTTTCGAGAAAACTTCCTCTCATAG 57.109 36.000 6.89 0.00 38.40 2.23
525 526 8.428063 TGGATGTCCATAGTTGATTTTGTTTTT 58.572 29.630 0.00 0.00 42.01 1.94
526 527 7.961351 TGGATGTCCATAGTTGATTTTGTTTT 58.039 30.769 0.00 0.00 42.01 2.43
527 528 7.537596 TGGATGTCCATAGTTGATTTTGTTT 57.462 32.000 0.00 0.00 42.01 2.83
577 589 4.864247 GCATGAACCAACAATTCGCTAAAT 59.136 37.500 0.00 0.00 0.00 1.40
629 641 5.414144 AGACTAGTACTACTTTTGGTCGGTC 59.586 44.000 0.00 1.39 0.00 4.79
689 701 1.808133 GCTCCCGTCAACAGGATCATC 60.808 57.143 0.00 0.00 0.00 2.92
864 893 2.476051 CGCCATGCACACGAGTTC 59.524 61.111 0.00 0.00 0.00 3.01
936 965 0.105760 AGTGCCACCATTGGTTTGGA 60.106 50.000 14.91 4.64 45.98 3.53
973 1002 1.374758 GCCGATGGATGGGTCGATC 60.375 63.158 0.00 0.00 40.11 3.69
974 1003 2.743718 GCCGATGGATGGGTCGAT 59.256 61.111 0.00 0.00 40.11 3.59
975 1004 3.546543 GGCCGATGGATGGGTCGA 61.547 66.667 0.00 0.00 40.11 4.20
976 1005 4.969196 CGGCCGATGGATGGGTCG 62.969 72.222 24.07 0.07 46.57 4.79
1405 1434 2.415010 CTCGTCCAGATCGGGCTG 59.585 66.667 7.07 2.04 37.17 4.85
1819 1854 3.597728 GCTACGCTCCTCCTCCGG 61.598 72.222 0.00 0.00 0.00 5.14
1821 1856 3.124686 CTGCTACGCTCCTCCTCC 58.875 66.667 0.00 0.00 0.00 4.30
2357 2395 8.611654 CAATCCATGGAAAGAAGAATGTTTTT 57.388 30.769 20.67 0.00 0.00 1.94
2411 2449 2.813754 GCCAAATCTGCACAAGTCAGTA 59.186 45.455 0.00 0.00 33.48 2.74
2412 2450 1.610522 GCCAAATCTGCACAAGTCAGT 59.389 47.619 0.00 0.00 33.48 3.41
2413 2451 1.884579 AGCCAAATCTGCACAAGTCAG 59.115 47.619 0.00 0.00 0.00 3.51
2414 2452 1.610038 CAGCCAAATCTGCACAAGTCA 59.390 47.619 0.00 0.00 0.00 3.41
2415 2453 1.881973 TCAGCCAAATCTGCACAAGTC 59.118 47.619 0.00 0.00 34.19 3.01
2416 2454 1.884579 CTCAGCCAAATCTGCACAAGT 59.115 47.619 0.00 0.00 34.19 3.16
2417 2455 1.402456 GCTCAGCCAAATCTGCACAAG 60.402 52.381 0.00 0.00 34.19 3.16
2418 2456 0.599558 GCTCAGCCAAATCTGCACAA 59.400 50.000 0.00 0.00 34.19 3.33
2979 3028 7.816031 AGAACTCATAAGCAAAAATCATTGGTG 59.184 33.333 0.00 0.00 40.62 4.17
2980 3029 7.899973 AGAACTCATAAGCAAAAATCATTGGT 58.100 30.769 0.00 0.00 42.43 3.67
2981 3030 8.030692 TGAGAACTCATAAGCAAAAATCATTGG 58.969 33.333 0.00 0.00 34.14 3.16
2984 3033 7.542025 GGTGAGAACTCATAAGCAAAAATCAT 58.458 34.615 7.77 0.00 42.18 2.45
2986 3035 6.024049 CGGTGAGAACTCATAAGCAAAAATC 58.976 40.000 7.77 0.00 42.18 2.17
3029 3085 1.063006 CCGTCATTGCTGCGAATGG 59.937 57.895 18.14 5.52 34.58 3.16
3035 3091 1.742880 TCAGAGCCGTCATTGCTGC 60.743 57.895 0.00 0.00 39.69 5.25
3343 3399 1.740285 CGCAGGCTTCCCGTATACT 59.260 57.895 0.56 0.00 35.76 2.12
3356 3412 4.821589 GAAGTCCTCCGGCGCAGG 62.822 72.222 21.57 21.57 0.00 4.85
3536 3592 0.177836 ACATCCATCAATGTCGCGGA 59.822 50.000 6.13 0.00 34.84 5.54
3537 3593 1.526887 GTACATCCATCAATGTCGCGG 59.473 52.381 6.13 0.00 40.32 6.46
3538 3594 2.200899 TGTACATCCATCAATGTCGCG 58.799 47.619 0.00 0.00 40.32 5.87
3539 3595 3.058708 CCATGTACATCCATCAATGTCGC 60.059 47.826 5.07 0.00 40.32 5.19
3550 3629 1.486310 TGGCAGAGACCATGTACATCC 59.514 52.381 5.07 2.15 33.75 3.51
3555 3634 1.555075 GAACCTGGCAGAGACCATGTA 59.445 52.381 17.94 0.00 37.55 2.29
3561 3645 2.435059 GGCGAACCTGGCAGAGAC 60.435 66.667 17.94 2.51 0.00 3.36
3742 3826 5.491982 TGTCCTTTATCTTTGAGAAGAGGC 58.508 41.667 0.00 0.00 44.65 4.70
3774 3858 3.518634 AGTAGAAGTAAGCAGAGCAGC 57.481 47.619 0.00 0.00 0.00 5.25
3785 3869 3.130516 CGACCATGGCTGAAGTAGAAGTA 59.869 47.826 13.04 0.00 0.00 2.24
3805 3889 1.580942 CGTCGTAACCCTGAACCGA 59.419 57.895 0.00 0.00 0.00 4.69
3928 4013 2.182030 CTTCTCCACCTCGCCGAC 59.818 66.667 0.00 0.00 0.00 4.79
4043 4128 2.046700 TTTAGGTTGGCTCGGCGG 60.047 61.111 7.21 0.00 0.00 6.13
4061 4146 2.723322 TGAGAATGGAGATGGCTTGG 57.277 50.000 0.00 0.00 0.00 3.61
4166 4251 8.142485 AGTTAGTTGGTACCACATACTACATT 57.858 34.615 19.99 9.31 33.87 2.71
4180 4265 9.545928 TCTTATTTGTAGGGTAGTTAGTTGGTA 57.454 33.333 0.00 0.00 0.00 3.25
4183 4268 9.886132 ATGTCTTATTTGTAGGGTAGTTAGTTG 57.114 33.333 0.00 0.00 0.00 3.16
4184 4269 9.886132 CATGTCTTATTTGTAGGGTAGTTAGTT 57.114 33.333 0.00 0.00 0.00 2.24
4229 4314 5.236695 CAGTTCTATGCATGAGTCTTGGATG 59.763 44.000 19.31 11.36 0.00 3.51
4233 4318 5.658468 TCTCAGTTCTATGCATGAGTCTTG 58.342 41.667 10.16 1.67 40.07 3.02
4300 4385 7.504238 TCAAAACTGTGACACTTATTATGGGTT 59.496 33.333 7.20 0.00 0.00 4.11
4302 4387 7.447374 TCAAAACTGTGACACTTATTATGGG 57.553 36.000 7.20 0.00 0.00 4.00
4317 4402 4.335594 GCAACTGGAGTAGTTCAAAACTGT 59.664 41.667 2.65 0.00 46.55 3.55
4329 4414 4.020218 ACTGATTTGCTAGCAACTGGAGTA 60.020 41.667 29.33 13.69 35.46 2.59
4331 4416 3.341823 ACTGATTTGCTAGCAACTGGAG 58.658 45.455 29.33 22.07 35.46 3.86
4332 4417 3.423539 ACTGATTTGCTAGCAACTGGA 57.576 42.857 29.33 15.59 35.46 3.86
4333 4418 4.937620 TCTAACTGATTTGCTAGCAACTGG 59.062 41.667 29.33 19.97 35.46 4.00
4334 4419 6.674694 ATCTAACTGATTTGCTAGCAACTG 57.325 37.500 29.33 22.44 35.46 3.16
4335 4420 8.043710 ACTAATCTAACTGATTTGCTAGCAACT 58.956 33.333 29.33 24.10 42.28 3.16
4337 4422 9.884636 TTACTAATCTAACTGATTTGCTAGCAA 57.115 29.630 26.06 26.06 42.28 3.91
4338 4423 9.884636 TTTACTAATCTAACTGATTTGCTAGCA 57.115 29.630 14.93 14.93 42.28 3.49
4359 4520 9.349713 TGGACTCAACATTGATTTAACTTTACT 57.650 29.630 0.00 0.00 36.46 2.24
4360 4521 9.612620 CTGGACTCAACATTGATTTAACTTTAC 57.387 33.333 0.00 0.00 36.46 2.01
4371 4533 3.576078 AACACCTGGACTCAACATTGA 57.424 42.857 0.00 0.00 35.57 2.57
4460 4625 2.755650 CATCTGCCGTGGATACCTTAC 58.244 52.381 0.00 0.00 0.00 2.34
4461 4626 1.070134 GCATCTGCCGTGGATACCTTA 59.930 52.381 0.00 0.00 34.31 2.69
4484 4649 3.135348 TGGTTGCCCAATTGATTTGTTCA 59.865 39.130 7.12 0.00 37.98 3.18
4521 4686 9.802039 ACTACTAGGGTCAAAAATGAATTTGTA 57.198 29.630 0.00 0.00 40.40 2.41
4527 4692 7.974504 AGAGAACTACTAGGGTCAAAAATGAA 58.025 34.615 0.00 0.00 0.00 2.57
4537 4702 7.039152 GGTTCTGTAAAAGAGAACTACTAGGGT 60.039 40.741 14.32 0.00 45.82 4.34
4584 4749 5.809562 CAGCATTTTGTTGGAACACACTTTA 59.190 36.000 0.00 0.00 39.29 1.85
4625 4791 5.221803 ACCAGAAGGCACCAGATATCTAATG 60.222 44.000 4.54 7.88 39.06 1.90
4663 4830 3.454812 ACAGCTTACCGATTTATGGAGGT 59.545 43.478 0.00 0.00 40.52 3.85
4680 4847 4.098960 CCATCAATTTTGCCATCTACAGCT 59.901 41.667 0.00 0.00 0.00 4.24
4739 4906 4.242475 CTCTTTACAGTCACATGCCGTTA 58.758 43.478 0.00 0.00 0.00 3.18
4744 4911 3.370366 CAGAGCTCTTTACAGTCACATGC 59.630 47.826 15.27 0.00 0.00 4.06
4745 4912 4.814147 TCAGAGCTCTTTACAGTCACATG 58.186 43.478 15.27 0.00 0.00 3.21
4746 4913 5.421693 AGATCAGAGCTCTTTACAGTCACAT 59.578 40.000 15.27 0.00 0.00 3.21
4762 4929 7.147828 TGGAATACCACTTTACAGAGATCAGAG 60.148 40.741 0.00 0.00 41.77 3.35
4875 5042 2.350522 AGCTGTTTTAGAGTGCATCCG 58.649 47.619 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.