Multiple sequence alignment - TraesCS7A01G382400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G382400 chr7A 100.000 2294 0 0 1 2294 556767330 556765037 0.000000e+00 4237.0
1 TraesCS7A01G382400 chr7A 100.000 28 0 0 641 668 556766625 556766598 4.000000e-03 52.8
2 TraesCS7A01G382400 chr7A 100.000 28 0 0 706 733 556766690 556766663 4.000000e-03 52.8
3 TraesCS7A01G382400 chr7D 93.750 1376 60 10 1 1353 490436585 490435213 0.000000e+00 2041.0
4 TraesCS7A01G382400 chr7D 93.532 201 13 0 1918 2118 490434945 490434745 1.330000e-77 300.0
5 TraesCS7A01G382400 chr7D 79.111 225 12 12 1388 1609 490435127 490434935 3.090000e-24 122.0
6 TraesCS7A01G382400 chr7D 100.000 28 0 0 641 668 490435880 490435853 4.000000e-03 52.8
7 TraesCS7A01G382400 chr7D 100.000 28 0 0 706 733 490435945 490435918 4.000000e-03 52.8
8 TraesCS7A01G382400 chr7B 89.116 588 25 12 787 1353 518916431 518915862 0.000000e+00 695.0
9 TraesCS7A01G382400 chr7B 92.857 462 26 6 1 459 518917476 518917019 0.000000e+00 664.0
10 TraesCS7A01G382400 chr7B 89.404 302 30 2 1609 1909 727386783 727387083 1.660000e-101 379.0
11 TraesCS7A01G382400 chr7B 91.026 234 19 2 1916 2148 518914724 518914492 4.760000e-82 315.0
12 TraesCS7A01G382400 chr7B 94.958 119 5 1 493 611 518916720 518916603 3.890000e-43 185.0
13 TraesCS7A01G382400 chr7B 100.000 28 0 0 707 734 518916540 518916513 4.000000e-03 52.8
14 TraesCS7A01G382400 chr2A 90.127 314 27 4 1600 1911 743375504 743375193 2.740000e-109 405.0
15 TraesCS7A01G382400 chr5A 89.744 312 30 2 1609 1919 559787339 559787649 4.590000e-107 398.0
16 TraesCS7A01G382400 chr5A 89.836 305 28 3 1609 1911 299295102 299294799 2.760000e-104 388.0
17 TraesCS7A01G382400 chr5A 93.284 134 8 1 984 1116 260336267 260336400 1.800000e-46 196.0
18 TraesCS7A01G382400 chr6A 89.803 304 29 2 1609 1911 422775948 422776250 2.760000e-104 388.0
19 TraesCS7A01G382400 chr6A 83.221 149 23 2 2148 2294 604190294 604190146 3.980000e-28 135.0
20 TraesCS7A01G382400 chr3D 89.836 305 28 3 1608 1911 527520240 527520542 2.760000e-104 388.0
21 TraesCS7A01G382400 chr3D 89.474 304 29 3 1609 1911 299692638 299692337 4.620000e-102 381.0
22 TraesCS7A01G382400 chr3D 84.028 144 22 1 2152 2294 347666323 347666180 1.110000e-28 137.0
23 TraesCS7A01G382400 chr3D 85.385 130 18 1 2166 2294 353855058 353854929 1.430000e-27 134.0
24 TraesCS7A01G382400 chr2B 88.710 310 33 2 1607 1915 697201371 697201063 5.980000e-101 377.0
25 TraesCS7A01G382400 chr2B 84.459 148 22 1 2148 2294 369929965 369930112 6.610000e-31 145.0
26 TraesCS7A01G382400 chr3A 88.254 315 33 4 1603 1916 703403986 703404297 7.740000e-100 374.0
27 TraesCS7A01G382400 chr5D 93.284 134 8 1 984 1116 160064862 160064729 1.800000e-46 196.0
28 TraesCS7A01G382400 chr5D 83.108 148 24 1 2148 2294 109063957 109064104 1.430000e-27 134.0
29 TraesCS7A01G382400 chr5B 92.537 134 9 1 984 1116 166538265 166538132 8.360000e-45 191.0
30 TraesCS7A01G382400 chr5B 84.247 146 23 0 2149 2294 347380510 347380655 2.380000e-30 143.0
31 TraesCS7A01G382400 chr2D 88.811 143 15 1 2152 2294 316113162 316113021 8.420000e-40 174.0
32 TraesCS7A01G382400 chr4B 86.486 148 17 3 2148 2294 481674579 481674434 2.360000e-35 159.0
33 TraesCS7A01G382400 chr4D 85.616 146 20 1 2149 2293 132136114 132136259 3.950000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G382400 chr7A 556765037 556767330 2293 True 1447.533333 4237 100.0000 1 2294 3 chr7A.!!$R1 2293
1 TraesCS7A01G382400 chr7D 490434745 490436585 1840 True 513.720000 2041 93.2786 1 2118 5 chr7D.!!$R1 2117
2 TraesCS7A01G382400 chr7B 518914492 518917476 2984 True 382.360000 695 93.5914 1 2148 5 chr7B.!!$R1 2147

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
976 1338 0.529378 GAGACGAAGCGGGTAAGGAA 59.471 55.0 0.0 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1831 3154 0.026285 GAACGCACATACGCACATCC 59.974 55.0 0.0 0.0 36.19 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 7.269477 AGATCAATATTCCTAAACAAGCTGC 57.731 36.000 0.00 0.00 0.00 5.25
254 256 5.804639 TGCTGGACATAGTAAAAGACACAT 58.195 37.500 0.00 0.00 0.00 3.21
286 288 7.704789 ATTCACAAGTCATTTTCTCAAAAGC 57.295 32.000 0.00 0.00 33.22 3.51
291 293 8.131100 CACAAGTCATTTTCTCAAAAGCTTAGA 58.869 33.333 0.00 0.00 33.22 2.10
292 294 8.348507 ACAAGTCATTTTCTCAAAAGCTTAGAG 58.651 33.333 18.16 18.16 33.22 2.43
296 298 7.805542 GTCATTTTCTCAAAAGCTTAGAGGTTC 59.194 37.037 21.83 8.18 34.42 3.62
297 299 7.721399 TCATTTTCTCAAAAGCTTAGAGGTTCT 59.279 33.333 21.83 8.22 34.42 3.01
344 347 5.285651 GTTAACACATTGGTAGCAGCAAAA 58.714 37.500 0.00 0.00 39.20 2.44
369 372 8.959734 AACTAAACAAAATAAATAGCGTCACC 57.040 30.769 0.00 0.00 0.00 4.02
382 385 2.300723 AGCGTCACCTGTATTTGTGGTA 59.699 45.455 0.00 0.00 33.29 3.25
383 386 3.055385 AGCGTCACCTGTATTTGTGGTAT 60.055 43.478 0.00 0.00 33.29 2.73
429 433 1.004745 ACATTGGATCCAGCGAAAGGT 59.995 47.619 15.53 4.58 46.81 3.50
450 454 5.102313 GGTGACACAAACAAAGAAAAGGAG 58.898 41.667 8.08 0.00 0.00 3.69
548 817 3.374042 TCTCCTCACCAACCACAAAAA 57.626 42.857 0.00 0.00 0.00 1.94
552 821 1.756538 CTCACCAACCACAAAAAGGCT 59.243 47.619 0.00 0.00 0.00 4.58
561 830 2.483363 CCACAAAAAGGCTTGCACATGA 60.483 45.455 0.00 0.00 0.00 3.07
582 851 7.283127 ACATGATACCAAAGTGATTATGACACC 59.717 37.037 0.00 0.00 38.82 4.16
900 1261 4.745125 AGTATGAACAATTCCAGATACGCG 59.255 41.667 3.53 3.53 0.00 6.01
957 1319 4.515567 AGAAACCTTACAAGCGGAAGAAAG 59.484 41.667 0.00 0.00 0.00 2.62
961 1323 3.680458 CCTTACAAGCGGAAGAAAGAGAC 59.320 47.826 0.00 0.00 0.00 3.36
973 1335 2.094649 AGAAAGAGACGAAGCGGGTAAG 60.095 50.000 0.00 0.00 0.00 2.34
976 1338 0.529378 GAGACGAAGCGGGTAAGGAA 59.471 55.000 0.00 0.00 0.00 3.36
978 1340 1.345415 AGACGAAGCGGGTAAGGAAAA 59.655 47.619 0.00 0.00 0.00 2.29
1286 1667 4.020617 CGGCTGGAACCTGCTGGA 62.021 66.667 17.64 0.00 41.55 3.86
1319 1700 1.509548 AAGGATCTGGGTTGGGGTGG 61.510 60.000 0.00 0.00 0.00 4.61
1350 1742 1.975660 GCCCGGCCAACATATAAGAA 58.024 50.000 2.24 0.00 0.00 2.52
1351 1743 2.303175 GCCCGGCCAACATATAAGAAA 58.697 47.619 2.24 0.00 0.00 2.52
1352 1744 2.691011 GCCCGGCCAACATATAAGAAAA 59.309 45.455 2.24 0.00 0.00 2.29
1353 1745 3.320826 GCCCGGCCAACATATAAGAAAAT 59.679 43.478 2.24 0.00 0.00 1.82
1354 1746 4.521256 GCCCGGCCAACATATAAGAAAATA 59.479 41.667 2.24 0.00 0.00 1.40
1355 1747 5.010213 GCCCGGCCAACATATAAGAAAATAA 59.990 40.000 2.24 0.00 0.00 1.40
1356 1748 6.295067 GCCCGGCCAACATATAAGAAAATAAT 60.295 38.462 2.24 0.00 0.00 1.28
1357 1749 7.666623 CCCGGCCAACATATAAGAAAATAATT 58.333 34.615 2.24 0.00 0.00 1.40
1358 1750 8.798402 CCCGGCCAACATATAAGAAAATAATTA 58.202 33.333 2.24 0.00 0.00 1.40
1392 1784 9.972106 AAAAGAAAGAGTCCATTATGATCTCTT 57.028 29.630 18.27 18.27 44.09 2.85
1395 1787 8.641541 AGAAAGAGTCCATTATGATCTCTTCTC 58.358 37.037 21.51 19.64 42.27 2.87
1397 1789 8.551682 AAGAGTCCATTATGATCTCTTCTCTT 57.448 34.615 18.27 11.73 40.10 2.85
1398 1790 9.653516 AAGAGTCCATTATGATCTCTTCTCTTA 57.346 33.333 18.27 0.00 40.10 2.10
1399 1791 9.827198 AGAGTCCATTATGATCTCTTCTCTTAT 57.173 33.333 11.15 0.00 32.52 1.73
1403 1795 9.920133 TCCATTATGATCTCTTCTCTTATTTCG 57.080 33.333 0.00 0.00 0.00 3.46
1404 1796 9.920133 CCATTATGATCTCTTCTCTTATTTCGA 57.080 33.333 0.00 0.00 0.00 3.71
1409 1801 7.631822 TGATCTCTTCTCTTATTTCGACTACG 58.368 38.462 0.00 0.00 41.26 3.51
1441 2330 8.893563 TCTCTTCTCTTCTCTCCTATCTTTTT 57.106 34.615 0.00 0.00 0.00 1.94
1443 2332 8.073467 TCTTCTCTTCTCTCCTATCTTTTTCC 57.927 38.462 0.00 0.00 0.00 3.13
1444 2333 7.898636 TCTTCTCTTCTCTCCTATCTTTTTCCT 59.101 37.037 0.00 0.00 0.00 3.36
1445 2334 9.196139 CTTCTCTTCTCTCCTATCTTTTTCCTA 57.804 37.037 0.00 0.00 0.00 2.94
1446 2335 8.528044 TCTCTTCTCTCCTATCTTTTTCCTAC 57.472 38.462 0.00 0.00 0.00 3.18
1448 2337 8.903059 TCTTCTCTCCTATCTTTTTCCTACTT 57.097 34.615 0.00 0.00 0.00 2.24
1449 2338 8.973182 TCTTCTCTCCTATCTTTTTCCTACTTC 58.027 37.037 0.00 0.00 0.00 3.01
1450 2339 8.666129 TTCTCTCCTATCTTTTTCCTACTTCA 57.334 34.615 0.00 0.00 0.00 3.02
1451 2340 8.666129 TCTCTCCTATCTTTTTCCTACTTCAA 57.334 34.615 0.00 0.00 0.00 2.69
1452 2341 9.101325 TCTCTCCTATCTTTTTCCTACTTCAAA 57.899 33.333 0.00 0.00 0.00 2.69
1453 2342 9.726438 CTCTCCTATCTTTTTCCTACTTCAAAA 57.274 33.333 0.00 0.00 0.00 2.44
1600 2923 1.134848 ACCCACAAACACACACAATGC 60.135 47.619 0.00 0.00 0.00 3.56
1602 2925 1.198767 CACAAACACACACAATGCGG 58.801 50.000 0.00 0.00 0.00 5.69
1603 2926 0.527385 ACAAACACACACAATGCGGC 60.527 50.000 0.00 0.00 0.00 6.53
1604 2927 0.248990 CAAACACACACAATGCGGCT 60.249 50.000 0.00 0.00 0.00 5.52
1605 2928 1.001924 CAAACACACACAATGCGGCTA 60.002 47.619 0.00 0.00 0.00 3.93
1606 2929 0.874390 AACACACACAATGCGGCTAG 59.126 50.000 0.00 0.00 0.00 3.42
1607 2930 0.955428 ACACACACAATGCGGCTAGG 60.955 55.000 0.00 0.00 0.00 3.02
1608 2931 1.377202 ACACACAATGCGGCTAGGG 60.377 57.895 0.00 0.00 0.00 3.53
1609 2932 2.438434 ACACAATGCGGCTAGGGC 60.438 61.111 0.00 0.00 37.82 5.19
1618 2941 2.437895 GGCTAGGGCGAACCAACC 60.438 66.667 0.00 0.00 43.89 3.77
1619 2942 2.669240 GCTAGGGCGAACCAACCT 59.331 61.111 0.00 0.00 43.89 3.50
1620 2943 1.745489 GCTAGGGCGAACCAACCTG 60.745 63.158 0.00 0.00 43.89 4.00
1621 2944 1.677552 CTAGGGCGAACCAACCTGT 59.322 57.895 0.00 0.00 43.89 4.00
1622 2945 0.673644 CTAGGGCGAACCAACCTGTG 60.674 60.000 0.00 0.00 43.89 3.66
1635 2958 3.825908 AACCTGTGGTTGGATGGTTAT 57.174 42.857 0.71 0.00 45.07 1.89
1636 2959 4.938575 AACCTGTGGTTGGATGGTTATA 57.061 40.909 0.71 0.00 45.07 0.98
1637 2960 5.466127 AACCTGTGGTTGGATGGTTATAT 57.534 39.130 0.71 0.00 45.07 0.86
1638 2961 4.792068 ACCTGTGGTTGGATGGTTATATG 58.208 43.478 0.00 0.00 27.29 1.78
1639 2962 4.144297 CCTGTGGTTGGATGGTTATATGG 58.856 47.826 0.00 0.00 0.00 2.74
1640 2963 4.141274 CCTGTGGTTGGATGGTTATATGGA 60.141 45.833 0.00 0.00 0.00 3.41
1641 2964 4.787551 TGTGGTTGGATGGTTATATGGAC 58.212 43.478 0.00 0.00 0.00 4.02
1642 2965 4.228438 TGTGGTTGGATGGTTATATGGACA 59.772 41.667 0.00 0.00 0.00 4.02
1643 2966 4.821805 GTGGTTGGATGGTTATATGGACAG 59.178 45.833 0.00 0.00 0.00 3.51
1644 2967 4.476846 TGGTTGGATGGTTATATGGACAGT 59.523 41.667 0.00 0.00 0.00 3.55
1645 2968 4.821805 GGTTGGATGGTTATATGGACAGTG 59.178 45.833 0.00 0.00 0.00 3.66
1646 2969 4.705110 TGGATGGTTATATGGACAGTGG 57.295 45.455 0.00 0.00 0.00 4.00
1647 2970 4.044308 TGGATGGTTATATGGACAGTGGT 58.956 43.478 0.00 0.00 0.00 4.16
1648 2971 5.220521 TGGATGGTTATATGGACAGTGGTA 58.779 41.667 0.00 0.00 0.00 3.25
1649 2972 5.849475 TGGATGGTTATATGGACAGTGGTAT 59.151 40.000 0.00 0.00 0.00 2.73
1650 2973 6.013725 TGGATGGTTATATGGACAGTGGTATC 60.014 42.308 0.00 0.00 0.00 2.24
1651 2974 6.213600 GGATGGTTATATGGACAGTGGTATCT 59.786 42.308 0.00 0.00 0.00 1.98
1652 2975 6.665992 TGGTTATATGGACAGTGGTATCTC 57.334 41.667 0.00 0.00 0.00 2.75
1653 2976 5.542635 TGGTTATATGGACAGTGGTATCTCC 59.457 44.000 0.00 0.00 0.00 3.71
1654 2977 5.542635 GGTTATATGGACAGTGGTATCTCCA 59.457 44.000 2.18 2.18 45.01 3.86
1661 2984 4.066614 TGGTATCTCCAGCCCACC 57.933 61.111 0.00 0.00 41.93 4.61
1662 2985 1.082019 TGGTATCTCCAGCCCACCA 59.918 57.895 0.00 0.00 41.93 4.17
1663 2986 0.982852 TGGTATCTCCAGCCCACCAG 60.983 60.000 0.00 0.00 41.93 4.00
1664 2987 1.700042 GGTATCTCCAGCCCACCAGG 61.700 65.000 0.00 0.00 35.73 4.45
1676 2999 1.538047 CCACCAGGGTTCAACTCATG 58.462 55.000 0.00 0.00 0.00 3.07
1677 3000 1.538047 CACCAGGGTTCAACTCATGG 58.462 55.000 7.82 7.82 0.00 3.66
1678 3001 1.149101 ACCAGGGTTCAACTCATGGT 58.851 50.000 8.91 8.91 36.24 3.55
1679 3002 1.202927 ACCAGGGTTCAACTCATGGTG 60.203 52.381 12.73 0.00 39.51 4.17
1680 3003 0.883833 CAGGGTTCAACTCATGGTGC 59.116 55.000 0.00 0.00 0.00 5.01
1681 3004 0.773644 AGGGTTCAACTCATGGTGCT 59.226 50.000 0.00 0.00 0.00 4.40
1682 3005 1.168714 GGGTTCAACTCATGGTGCTC 58.831 55.000 0.00 0.00 0.00 4.26
1683 3006 0.798776 GGTTCAACTCATGGTGCTCG 59.201 55.000 0.00 0.00 0.00 5.03
1684 3007 0.166814 GTTCAACTCATGGTGCTCGC 59.833 55.000 0.00 0.00 0.00 5.03
1685 3008 0.250252 TTCAACTCATGGTGCTCGCA 60.250 50.000 0.00 0.00 0.00 5.10
1686 3009 0.036105 TCAACTCATGGTGCTCGCAT 60.036 50.000 0.00 0.00 0.00 4.73
1687 3010 0.806868 CAACTCATGGTGCTCGCATT 59.193 50.000 0.00 0.00 0.00 3.56
1688 3011 1.200716 CAACTCATGGTGCTCGCATTT 59.799 47.619 0.00 0.00 0.00 2.32
1689 3012 2.401583 ACTCATGGTGCTCGCATTTA 57.598 45.000 0.00 0.00 0.00 1.40
1690 3013 2.923121 ACTCATGGTGCTCGCATTTAT 58.077 42.857 0.00 0.00 0.00 1.40
1691 3014 2.874701 ACTCATGGTGCTCGCATTTATC 59.125 45.455 0.00 0.00 0.00 1.75
1692 3015 2.221169 TCATGGTGCTCGCATTTATCC 58.779 47.619 0.00 0.00 0.00 2.59
1693 3016 2.158769 TCATGGTGCTCGCATTTATCCT 60.159 45.455 0.00 0.00 0.00 3.24
1694 3017 1.667236 TGGTGCTCGCATTTATCCTG 58.333 50.000 0.00 0.00 0.00 3.86
1695 3018 1.209261 TGGTGCTCGCATTTATCCTGA 59.791 47.619 0.00 0.00 0.00 3.86
1696 3019 2.288666 GGTGCTCGCATTTATCCTGAA 58.711 47.619 0.00 0.00 0.00 3.02
1697 3020 2.880890 GGTGCTCGCATTTATCCTGAAT 59.119 45.455 0.00 0.00 0.00 2.57
1698 3021 3.316308 GGTGCTCGCATTTATCCTGAATT 59.684 43.478 0.00 0.00 0.00 2.17
1699 3022 4.202050 GGTGCTCGCATTTATCCTGAATTT 60.202 41.667 0.00 0.00 0.00 1.82
1700 3023 5.008613 GGTGCTCGCATTTATCCTGAATTTA 59.991 40.000 0.00 0.00 0.00 1.40
1701 3024 6.294176 GGTGCTCGCATTTATCCTGAATTTAT 60.294 38.462 0.00 0.00 0.00 1.40
1702 3025 7.141363 GTGCTCGCATTTATCCTGAATTTATT 58.859 34.615 0.00 0.00 0.00 1.40
1703 3026 7.649306 GTGCTCGCATTTATCCTGAATTTATTT 59.351 33.333 0.00 0.00 0.00 1.40
1704 3027 8.196771 TGCTCGCATTTATCCTGAATTTATTTT 58.803 29.630 0.00 0.00 0.00 1.82
1705 3028 9.677567 GCTCGCATTTATCCTGAATTTATTTTA 57.322 29.630 0.00 0.00 0.00 1.52
1716 3039 9.581099 TCCTGAATTTATTTTAGAATTTTCGGC 57.419 29.630 0.00 0.00 0.00 5.54
1717 3040 8.531530 CCTGAATTTATTTTAGAATTTTCGGCG 58.468 33.333 0.00 0.00 0.00 6.46
1718 3041 9.284594 CTGAATTTATTTTAGAATTTTCGGCGA 57.715 29.630 4.99 4.99 0.00 5.54
1719 3042 9.796120 TGAATTTATTTTAGAATTTTCGGCGAT 57.204 25.926 11.76 0.00 0.00 4.58
1722 3045 8.756376 TTTATTTTAGAATTTTCGGCGATACG 57.244 30.769 11.76 0.00 0.00 3.06
1732 3055 2.995482 GCGATACGCGTTCAGTGG 59.005 61.111 20.78 4.13 44.55 4.00
1733 3056 2.514013 GCGATACGCGTTCAGTGGG 61.514 63.158 20.78 1.14 44.55 4.61
1734 3057 1.138036 CGATACGCGTTCAGTGGGA 59.862 57.895 20.78 0.00 34.64 4.37
1735 3058 0.866061 CGATACGCGTTCAGTGGGAG 60.866 60.000 20.78 0.00 34.64 4.30
1736 3059 0.527817 GATACGCGTTCAGTGGGAGG 60.528 60.000 20.78 0.00 33.90 4.30
1737 3060 0.968901 ATACGCGTTCAGTGGGAGGA 60.969 55.000 20.78 0.00 33.90 3.71
1738 3061 1.592400 TACGCGTTCAGTGGGAGGAG 61.592 60.000 20.78 0.00 33.90 3.69
1739 3062 2.636412 CGCGTTCAGTGGGAGGAGA 61.636 63.158 0.00 0.00 0.00 3.71
1740 3063 1.079750 GCGTTCAGTGGGAGGAGAC 60.080 63.158 0.00 0.00 0.00 3.36
1741 3064 1.213013 CGTTCAGTGGGAGGAGACG 59.787 63.158 0.00 0.00 0.00 4.18
1742 3065 1.524863 CGTTCAGTGGGAGGAGACGT 61.525 60.000 0.00 0.00 0.00 4.34
1743 3066 0.680061 GTTCAGTGGGAGGAGACGTT 59.320 55.000 0.00 0.00 0.00 3.99
1744 3067 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
1752 3075 4.808649 GGAGACGTTCCCATCGAC 57.191 61.111 0.00 0.00 40.37 4.20
1753 3076 2.190756 GGAGACGTTCCCATCGACT 58.809 57.895 0.00 0.00 40.37 4.18
1754 3077 1.386533 GGAGACGTTCCCATCGACTA 58.613 55.000 0.00 0.00 40.37 2.59
1755 3078 1.065251 GGAGACGTTCCCATCGACTAC 59.935 57.143 0.00 0.00 40.37 2.73
1756 3079 0.731417 AGACGTTCCCATCGACTACG 59.269 55.000 0.00 0.00 41.26 3.51
1766 3089 2.327244 CGACTACGAGGCGCCTAC 59.673 66.667 32.97 21.51 41.27 3.18
1767 3090 2.327244 GACTACGAGGCGCCTACG 59.673 66.667 32.97 32.67 44.07 3.51
1768 3091 3.178569 GACTACGAGGCGCCTACGG 62.179 68.421 34.97 27.37 40.57 4.02
1769 3092 3.207669 CTACGAGGCGCCTACGGT 61.208 66.667 34.97 30.33 40.57 4.83
1770 3093 3.465296 CTACGAGGCGCCTACGGTG 62.465 68.421 34.97 26.78 40.57 4.94
1771 3094 3.974835 TACGAGGCGCCTACGGTGA 62.975 63.158 34.97 23.77 40.57 4.02
1772 3095 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
1775 3098 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
1776 3099 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
1777 3100 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
1778 3101 1.800315 CGCCTACGGTGACTTCGTG 60.800 63.158 0.00 0.00 41.24 4.35
1779 3102 1.582968 GCCTACGGTGACTTCGTGA 59.417 57.895 0.00 0.00 41.24 4.35
1780 3103 0.038892 GCCTACGGTGACTTCGTGAA 60.039 55.000 0.00 0.00 41.24 3.18
1781 3104 1.603678 GCCTACGGTGACTTCGTGAAA 60.604 52.381 0.00 0.00 41.24 2.69
1782 3105 2.929592 GCCTACGGTGACTTCGTGAAAT 60.930 50.000 0.00 0.00 41.24 2.17
1783 3106 2.921754 CCTACGGTGACTTCGTGAAATC 59.078 50.000 0.00 0.00 41.24 2.17
1784 3107 2.814280 ACGGTGACTTCGTGAAATCT 57.186 45.000 0.00 0.00 39.55 2.40
1785 3108 2.673833 ACGGTGACTTCGTGAAATCTC 58.326 47.619 0.00 0.00 39.55 2.75
1786 3109 2.035449 ACGGTGACTTCGTGAAATCTCA 59.965 45.455 0.00 0.00 39.55 3.27
1787 3110 3.057019 CGGTGACTTCGTGAAATCTCAA 58.943 45.455 0.00 0.00 31.88 3.02
1788 3111 3.121944 CGGTGACTTCGTGAAATCTCAAG 59.878 47.826 0.00 0.00 31.88 3.02
1789 3112 4.307432 GGTGACTTCGTGAAATCTCAAGA 58.693 43.478 0.00 0.00 38.16 3.02
1790 3113 4.932200 GGTGACTTCGTGAAATCTCAAGAT 59.068 41.667 0.00 0.00 39.40 2.40
1791 3114 5.163913 GGTGACTTCGTGAAATCTCAAGATG 60.164 44.000 0.00 0.00 39.40 2.90
1792 3115 5.635280 GTGACTTCGTGAAATCTCAAGATGA 59.365 40.000 5.14 0.00 39.40 2.92
1793 3116 6.312426 GTGACTTCGTGAAATCTCAAGATGAT 59.688 38.462 5.14 0.00 39.40 2.45
1794 3117 7.489435 GTGACTTCGTGAAATCTCAAGATGATA 59.511 37.037 5.14 0.00 39.40 2.15
1795 3118 8.200120 TGACTTCGTGAAATCTCAAGATGATAT 58.800 33.333 5.14 0.00 39.40 1.63
1796 3119 8.362860 ACTTCGTGAAATCTCAAGATGATATG 57.637 34.615 5.14 0.00 39.40 1.78
1797 3120 7.984050 ACTTCGTGAAATCTCAAGATGATATGT 59.016 33.333 5.14 0.00 39.40 2.29
1798 3121 8.722480 TTCGTGAAATCTCAAGATGATATGTT 57.278 30.769 0.00 0.00 39.40 2.71
1799 3122 8.134905 TCGTGAAATCTCAAGATGATATGTTG 57.865 34.615 0.00 0.00 35.47 3.33
1800 3123 7.225341 TCGTGAAATCTCAAGATGATATGTTGG 59.775 37.037 0.00 0.00 35.47 3.77
1801 3124 7.137426 GTGAAATCTCAAGATGATATGTTGGC 58.863 38.462 0.00 0.00 34.59 4.52
1802 3125 7.013083 GTGAAATCTCAAGATGATATGTTGGCT 59.987 37.037 0.00 0.00 34.59 4.75
1803 3126 7.228108 TGAAATCTCAAGATGATATGTTGGCTC 59.772 37.037 0.00 0.00 34.59 4.70
1804 3127 5.619132 TCTCAAGATGATATGTTGGCTCA 57.381 39.130 0.00 0.00 34.59 4.26
1805 3128 5.608449 TCTCAAGATGATATGTTGGCTCAG 58.392 41.667 0.00 0.00 34.59 3.35
1806 3129 5.129980 TCTCAAGATGATATGTTGGCTCAGT 59.870 40.000 0.00 0.00 34.59 3.41
1807 3130 5.748402 TCAAGATGATATGTTGGCTCAGTT 58.252 37.500 0.00 0.00 34.59 3.16
1808 3131 6.182627 TCAAGATGATATGTTGGCTCAGTTT 58.817 36.000 0.00 0.00 34.59 2.66
1809 3132 6.317140 TCAAGATGATATGTTGGCTCAGTTTC 59.683 38.462 0.00 0.00 34.59 2.78
1810 3133 5.999044 AGATGATATGTTGGCTCAGTTTCT 58.001 37.500 0.00 0.00 0.00 2.52
1811 3134 6.054295 AGATGATATGTTGGCTCAGTTTCTC 58.946 40.000 0.00 0.00 0.00 2.87
1812 3135 4.183865 TGATATGTTGGCTCAGTTTCTCG 58.816 43.478 0.00 0.00 0.00 4.04
1813 3136 1.813513 ATGTTGGCTCAGTTTCTCGG 58.186 50.000 0.00 0.00 0.00 4.63
1814 3137 0.756294 TGTTGGCTCAGTTTCTCGGA 59.244 50.000 0.00 0.00 0.00 4.55
1815 3138 1.270305 TGTTGGCTCAGTTTCTCGGAG 60.270 52.381 0.00 0.00 40.44 4.63
1816 3139 0.321671 TTGGCTCAGTTTCTCGGAGG 59.678 55.000 4.96 0.00 38.48 4.30
1817 3140 0.832135 TGGCTCAGTTTCTCGGAGGT 60.832 55.000 4.96 0.00 38.48 3.85
1818 3141 0.390472 GGCTCAGTTTCTCGGAGGTG 60.390 60.000 4.96 0.00 38.48 4.00
1819 3142 1.016653 GCTCAGTTTCTCGGAGGTGC 61.017 60.000 4.96 0.00 38.48 5.01
1820 3143 0.605589 CTCAGTTTCTCGGAGGTGCT 59.394 55.000 4.96 0.00 35.32 4.40
1821 3144 0.603569 TCAGTTTCTCGGAGGTGCTC 59.396 55.000 4.96 0.00 0.00 4.26
1822 3145 0.318441 CAGTTTCTCGGAGGTGCTCA 59.682 55.000 4.96 0.00 31.08 4.26
1823 3146 1.066573 CAGTTTCTCGGAGGTGCTCAT 60.067 52.381 4.96 0.00 31.08 2.90
1824 3147 2.166459 CAGTTTCTCGGAGGTGCTCATA 59.834 50.000 4.96 0.00 31.08 2.15
1825 3148 2.832129 AGTTTCTCGGAGGTGCTCATAA 59.168 45.455 4.96 0.00 31.08 1.90
1826 3149 3.118956 AGTTTCTCGGAGGTGCTCATAAG 60.119 47.826 4.96 0.00 31.08 1.73
1827 3150 1.403814 TCTCGGAGGTGCTCATAAGG 58.596 55.000 4.96 0.00 31.08 2.69
1828 3151 0.390860 CTCGGAGGTGCTCATAAGGG 59.609 60.000 0.00 0.00 31.08 3.95
1829 3152 0.325296 TCGGAGGTGCTCATAAGGGT 60.325 55.000 0.00 0.00 31.08 4.34
1830 3153 1.063492 TCGGAGGTGCTCATAAGGGTA 60.063 52.381 0.00 0.00 31.08 3.69
1831 3154 1.341531 CGGAGGTGCTCATAAGGGTAG 59.658 57.143 0.00 0.00 31.08 3.18
1832 3155 1.694696 GGAGGTGCTCATAAGGGTAGG 59.305 57.143 0.00 0.00 31.08 3.18
1833 3156 2.679082 GAGGTGCTCATAAGGGTAGGA 58.321 52.381 0.00 0.00 0.00 2.94
1834 3157 3.243724 GAGGTGCTCATAAGGGTAGGAT 58.756 50.000 0.00 0.00 0.00 3.24
1835 3158 2.975489 AGGTGCTCATAAGGGTAGGATG 59.025 50.000 0.00 0.00 0.00 3.51
1836 3159 2.706190 GGTGCTCATAAGGGTAGGATGT 59.294 50.000 0.00 0.00 0.00 3.06
1837 3160 3.495100 GGTGCTCATAAGGGTAGGATGTG 60.495 52.174 0.00 0.00 0.00 3.21
1838 3161 2.104792 TGCTCATAAGGGTAGGATGTGC 59.895 50.000 0.00 0.00 39.41 4.57
1839 3162 2.868044 GCTCATAAGGGTAGGATGTGCG 60.868 54.545 0.00 0.00 32.41 5.34
1840 3163 2.365617 CTCATAAGGGTAGGATGTGCGT 59.634 50.000 0.00 0.00 0.00 5.24
1841 3164 3.568443 TCATAAGGGTAGGATGTGCGTA 58.432 45.455 0.00 0.00 0.00 4.42
1842 3165 4.157246 TCATAAGGGTAGGATGTGCGTAT 58.843 43.478 0.00 0.00 0.00 3.06
1843 3166 2.910688 AAGGGTAGGATGTGCGTATG 57.089 50.000 0.00 0.00 0.00 2.39
1844 3167 1.789523 AGGGTAGGATGTGCGTATGT 58.210 50.000 0.00 0.00 0.00 2.29
1845 3168 1.412710 AGGGTAGGATGTGCGTATGTG 59.587 52.381 0.00 0.00 0.00 3.21
1846 3169 1.217882 GGTAGGATGTGCGTATGTGC 58.782 55.000 0.00 0.00 0.00 4.57
1847 3170 0.852777 GTAGGATGTGCGTATGTGCG 59.147 55.000 0.00 0.00 37.81 5.34
1848 3171 0.458260 TAGGATGTGCGTATGTGCGT 59.542 50.000 0.00 0.00 37.81 5.24
1849 3172 0.391130 AGGATGTGCGTATGTGCGTT 60.391 50.000 0.00 0.00 37.81 4.84
1850 3173 0.026285 GGATGTGCGTATGTGCGTTC 59.974 55.000 0.00 0.00 37.81 3.95
1851 3174 0.718904 GATGTGCGTATGTGCGTTCA 59.281 50.000 0.00 0.00 37.81 3.18
1852 3175 1.327460 GATGTGCGTATGTGCGTTCAT 59.673 47.619 0.00 0.87 37.81 2.57
1853 3176 1.997669 TGTGCGTATGTGCGTTCATA 58.002 45.000 0.00 0.00 37.81 2.15
1854 3177 2.545731 TGTGCGTATGTGCGTTCATAT 58.454 42.857 5.34 0.00 37.81 1.78
1855 3178 2.283884 TGTGCGTATGTGCGTTCATATG 59.716 45.455 13.12 13.12 39.15 1.78
1856 3179 1.864082 TGCGTATGTGCGTTCATATGG 59.136 47.619 16.64 9.24 37.61 2.74
1857 3180 2.131972 GCGTATGTGCGTTCATATGGA 58.868 47.619 16.64 0.00 37.61 3.41
1858 3181 2.736721 GCGTATGTGCGTTCATATGGAT 59.263 45.455 16.64 0.00 37.61 3.41
1859 3182 3.423515 GCGTATGTGCGTTCATATGGATG 60.424 47.826 16.64 0.00 37.61 3.51
1860 3183 3.987220 CGTATGTGCGTTCATATGGATGA 59.013 43.478 7.45 0.00 40.45 2.92
1861 3184 4.090498 CGTATGTGCGTTCATATGGATGAG 59.910 45.833 7.45 0.00 43.03 2.90
1862 3185 3.541996 TGTGCGTTCATATGGATGAGT 57.458 42.857 7.45 0.00 43.03 3.41
1863 3186 3.197265 TGTGCGTTCATATGGATGAGTG 58.803 45.455 7.45 0.00 43.03 3.51
1864 3187 3.198068 GTGCGTTCATATGGATGAGTGT 58.802 45.455 7.45 0.00 43.03 3.55
1865 3188 4.142049 TGTGCGTTCATATGGATGAGTGTA 60.142 41.667 7.45 0.00 43.03 2.90
1866 3189 4.991056 GTGCGTTCATATGGATGAGTGTAT 59.009 41.667 7.45 0.00 43.03 2.29
1867 3190 4.990426 TGCGTTCATATGGATGAGTGTATG 59.010 41.667 7.45 0.00 43.03 2.39
1868 3191 4.143030 GCGTTCATATGGATGAGTGTATGC 60.143 45.833 7.45 0.00 43.03 3.14
1869 3192 4.090498 CGTTCATATGGATGAGTGTATGCG 59.910 45.833 2.13 0.00 43.03 4.73
1870 3193 4.871933 TCATATGGATGAGTGTATGCGT 57.128 40.909 2.13 0.00 37.15 5.24
1871 3194 4.559153 TCATATGGATGAGTGTATGCGTG 58.441 43.478 2.13 0.00 37.15 5.34
1872 3195 2.988010 ATGGATGAGTGTATGCGTGT 57.012 45.000 0.00 0.00 0.00 4.49
1873 3196 5.242838 TCATATGGATGAGTGTATGCGTGTA 59.757 40.000 2.13 0.00 37.15 2.90
1874 3197 4.607293 ATGGATGAGTGTATGCGTGTAT 57.393 40.909 0.00 0.00 0.00 2.29
1875 3198 5.722021 ATGGATGAGTGTATGCGTGTATA 57.278 39.130 0.00 0.00 0.00 1.47
1876 3199 5.722021 TGGATGAGTGTATGCGTGTATAT 57.278 39.130 0.00 0.00 0.00 0.86
1877 3200 6.827586 TGGATGAGTGTATGCGTGTATATA 57.172 37.500 0.00 0.00 0.00 0.86
1878 3201 7.404671 TGGATGAGTGTATGCGTGTATATAT 57.595 36.000 0.00 0.00 0.00 0.86
1879 3202 7.257722 TGGATGAGTGTATGCGTGTATATATG 58.742 38.462 0.00 0.00 0.00 1.78
1880 3203 7.122055 TGGATGAGTGTATGCGTGTATATATGA 59.878 37.037 0.00 0.00 0.00 2.15
1881 3204 7.645735 GGATGAGTGTATGCGTGTATATATGAG 59.354 40.741 0.00 0.00 0.00 2.90
1882 3205 6.322491 TGAGTGTATGCGTGTATATATGAGC 58.678 40.000 0.00 0.00 0.00 4.26
1883 3206 5.332707 AGTGTATGCGTGTATATATGAGCG 58.667 41.667 0.00 0.00 0.00 5.03
1884 3207 4.027621 GTGTATGCGTGTATATATGAGCGC 60.028 45.833 16.99 16.99 44.29 5.92
1885 3208 3.510388 ATGCGTGTATATATGAGCGCT 57.490 42.857 11.27 11.27 44.34 5.92
1886 3209 3.297830 TGCGTGTATATATGAGCGCTT 57.702 42.857 13.26 0.00 44.34 4.68
1887 3210 2.986479 TGCGTGTATATATGAGCGCTTG 59.014 45.455 13.26 0.00 44.34 4.01
1888 3211 2.222596 GCGTGTATATATGAGCGCTTGC 60.223 50.000 13.26 0.00 41.37 4.01
1889 3212 2.026860 CGTGTATATATGAGCGCTTGCG 59.973 50.000 13.26 10.90 45.69 4.85
1890 3213 2.987149 GTGTATATATGAGCGCTTGCGT 59.013 45.455 13.26 3.24 45.69 5.24
1891 3214 4.163552 GTGTATATATGAGCGCTTGCGTA 58.836 43.478 13.26 5.86 45.69 4.42
1892 3215 4.798907 GTGTATATATGAGCGCTTGCGTAT 59.201 41.667 13.26 13.43 45.69 3.06
1893 3216 4.798387 TGTATATATGAGCGCTTGCGTATG 59.202 41.667 13.26 0.00 45.69 2.39
1894 3217 2.154854 ATATGAGCGCTTGCGTATGT 57.845 45.000 13.26 5.01 45.69 2.29
1895 3218 2.785713 TATGAGCGCTTGCGTATGTA 57.214 45.000 13.26 3.16 45.69 2.29
1896 3219 1.209128 ATGAGCGCTTGCGTATGTAC 58.791 50.000 13.26 0.00 45.69 2.90
1897 3220 0.172578 TGAGCGCTTGCGTATGTACT 59.827 50.000 13.26 3.73 45.69 2.73
1898 3221 0.572590 GAGCGCTTGCGTATGTACTG 59.427 55.000 13.26 0.00 45.69 2.74
1899 3222 0.172578 AGCGCTTGCGTATGTACTGA 59.827 50.000 16.38 0.00 45.69 3.41
1900 3223 1.202417 AGCGCTTGCGTATGTACTGAT 60.202 47.619 16.38 0.00 45.69 2.90
1901 3224 1.071239 GCGCTTGCGTATGTACTGATG 60.071 52.381 16.38 0.00 0.00 3.07
1902 3225 2.193447 CGCTTGCGTATGTACTGATGT 58.807 47.619 6.86 0.00 0.00 3.06
1903 3226 2.603110 CGCTTGCGTATGTACTGATGTT 59.397 45.455 6.86 0.00 0.00 2.71
1904 3227 3.301835 CGCTTGCGTATGTACTGATGTTC 60.302 47.826 6.86 0.00 0.00 3.18
1905 3228 3.616821 GCTTGCGTATGTACTGATGTTCA 59.383 43.478 0.00 0.00 0.00 3.18
1906 3229 4.092821 GCTTGCGTATGTACTGATGTTCAA 59.907 41.667 0.00 0.00 0.00 2.69
1907 3230 5.390461 GCTTGCGTATGTACTGATGTTCAAA 60.390 40.000 0.00 0.00 0.00 2.69
1908 3231 6.546972 TTGCGTATGTACTGATGTTCAAAA 57.453 33.333 0.00 0.00 0.00 2.44
1909 3232 6.546972 TGCGTATGTACTGATGTTCAAAAA 57.453 33.333 0.00 0.00 0.00 1.94
1943 3266 4.470304 GGCTAGGGTTTCTTCTCCTTCTTA 59.530 45.833 0.00 0.00 32.46 2.10
1955 3278 1.559682 TCCTTCTTAAGCCGCCATCTT 59.440 47.619 0.00 0.00 0.00 2.40
2009 3332 7.184106 TCTTCGTTTGATGTGTACTTGTTTTC 58.816 34.615 0.00 0.00 0.00 2.29
2039 3362 1.005394 GTTCGTGTGTCCCATCGGT 60.005 57.895 0.00 0.00 0.00 4.69
2140 3464 3.164268 ACACATATGGCAGGCTTTGAAA 58.836 40.909 7.80 0.00 0.00 2.69
2148 3472 1.529244 AGGCTTTGAAAGTGCGGCT 60.529 52.632 6.81 0.00 0.00 5.52
2149 3473 1.372128 GGCTTTGAAAGTGCGGCTG 60.372 57.895 6.81 0.00 0.00 4.85
2150 3474 1.372128 GCTTTGAAAGTGCGGCTGG 60.372 57.895 6.81 0.00 0.00 4.85
2151 3475 2.032981 CTTTGAAAGTGCGGCTGGT 58.967 52.632 0.00 0.00 0.00 4.00
2152 3476 1.234821 CTTTGAAAGTGCGGCTGGTA 58.765 50.000 0.00 0.00 0.00 3.25
2153 3477 0.948678 TTTGAAAGTGCGGCTGGTAC 59.051 50.000 0.00 0.00 0.00 3.34
2154 3478 0.107831 TTGAAAGTGCGGCTGGTACT 59.892 50.000 0.00 0.00 44.05 2.73
2157 3481 3.148084 AGTGCGGCTGGTACTTGT 58.852 55.556 0.00 0.00 38.56 3.16
2158 3482 2.358039 AGTGCGGCTGGTACTTGTA 58.642 52.632 0.00 0.00 38.56 2.41
2159 3483 0.682852 AGTGCGGCTGGTACTTGTAA 59.317 50.000 0.00 0.00 38.56 2.41
2160 3484 1.071071 AGTGCGGCTGGTACTTGTAAA 59.929 47.619 0.00 0.00 38.56 2.01
2161 3485 1.196127 GTGCGGCTGGTACTTGTAAAC 59.804 52.381 0.00 0.00 0.00 2.01
2162 3486 1.071071 TGCGGCTGGTACTTGTAAACT 59.929 47.619 0.00 0.00 0.00 2.66
2163 3487 2.299582 TGCGGCTGGTACTTGTAAACTA 59.700 45.455 0.00 0.00 0.00 2.24
2164 3488 3.055675 TGCGGCTGGTACTTGTAAACTAT 60.056 43.478 0.00 0.00 0.00 2.12
2165 3489 3.308866 GCGGCTGGTACTTGTAAACTATG 59.691 47.826 0.00 0.00 0.00 2.23
2166 3490 4.501071 CGGCTGGTACTTGTAAACTATGT 58.499 43.478 0.00 0.00 0.00 2.29
2167 3491 4.933400 CGGCTGGTACTTGTAAACTATGTT 59.067 41.667 0.00 0.00 0.00 2.71
2168 3492 5.163893 CGGCTGGTACTTGTAAACTATGTTG 60.164 44.000 0.00 0.00 0.00 3.33
2169 3493 5.123344 GGCTGGTACTTGTAAACTATGTTGG 59.877 44.000 0.00 0.00 0.00 3.77
2170 3494 5.123344 GCTGGTACTTGTAAACTATGTTGGG 59.877 44.000 0.00 0.00 0.00 4.12
2171 3495 6.436738 TGGTACTTGTAAACTATGTTGGGA 57.563 37.500 0.00 0.00 0.00 4.37
2172 3496 7.023171 TGGTACTTGTAAACTATGTTGGGAT 57.977 36.000 0.00 0.00 0.00 3.85
2173 3497 7.463431 TGGTACTTGTAAACTATGTTGGGATT 58.537 34.615 0.00 0.00 0.00 3.01
2174 3498 7.945664 TGGTACTTGTAAACTATGTTGGGATTT 59.054 33.333 0.00 0.00 0.00 2.17
2175 3499 8.799367 GGTACTTGTAAACTATGTTGGGATTTT 58.201 33.333 0.00 0.00 0.00 1.82
2178 3502 8.364894 ACTTGTAAACTATGTTGGGATTTTTCC 58.635 33.333 0.00 0.00 0.00 3.13
2187 3511 2.801077 GGGATTTTTCCCGAAGAGGA 57.199 50.000 0.00 0.00 45.00 3.71
2188 3512 2.644676 GGGATTTTTCCCGAAGAGGAG 58.355 52.381 0.00 0.00 45.00 3.69
2189 3513 2.644676 GGATTTTTCCCGAAGAGGAGG 58.355 52.381 0.00 0.00 45.00 4.30
2193 3517 2.690452 TCCCGAAGAGGAGGGGAG 59.310 66.667 0.19 0.00 44.99 4.30
2194 3518 1.934341 TCCCGAAGAGGAGGGGAGA 60.934 63.158 0.19 0.00 44.99 3.71
2195 3519 1.234529 CCCGAAGAGGAGGGGAGAT 59.765 63.158 0.00 0.00 44.10 2.75
2196 3520 1.118356 CCCGAAGAGGAGGGGAGATG 61.118 65.000 0.00 0.00 44.10 2.90
2197 3521 1.745264 CGAAGAGGAGGGGAGATGC 59.255 63.158 0.00 0.00 0.00 3.91
2198 3522 1.745264 GAAGAGGAGGGGAGATGCG 59.255 63.158 0.00 0.00 0.00 4.73
2199 3523 1.753368 GAAGAGGAGGGGAGATGCGG 61.753 65.000 0.00 0.00 0.00 5.69
2200 3524 2.444895 GAGGAGGGGAGATGCGGT 60.445 66.667 0.00 0.00 0.00 5.68
2201 3525 1.152525 GAGGAGGGGAGATGCGGTA 60.153 63.158 0.00 0.00 0.00 4.02
2202 3526 1.457831 AGGAGGGGAGATGCGGTAC 60.458 63.158 0.00 0.00 0.00 3.34
2203 3527 1.760875 GGAGGGGAGATGCGGTACA 60.761 63.158 0.00 0.00 0.00 2.90
2204 3528 1.742768 GAGGGGAGATGCGGTACAG 59.257 63.158 0.00 0.00 0.00 2.74
2205 3529 1.001760 AGGGGAGATGCGGTACAGT 59.998 57.895 0.00 0.00 0.00 3.55
2206 3530 0.260816 AGGGGAGATGCGGTACAGTA 59.739 55.000 0.00 0.00 0.00 2.74
2207 3531 0.674534 GGGGAGATGCGGTACAGTAG 59.325 60.000 0.00 0.00 0.00 2.57
2208 3532 1.688772 GGGAGATGCGGTACAGTAGA 58.311 55.000 0.00 0.00 0.00 2.59
2209 3533 1.609555 GGGAGATGCGGTACAGTAGAG 59.390 57.143 0.00 0.00 0.00 2.43
2210 3534 2.573369 GGAGATGCGGTACAGTAGAGA 58.427 52.381 0.00 0.00 0.00 3.10
2211 3535 3.150767 GGAGATGCGGTACAGTAGAGAT 58.849 50.000 0.00 0.00 0.00 2.75
2212 3536 4.325119 GGAGATGCGGTACAGTAGAGATA 58.675 47.826 0.00 0.00 0.00 1.98
2213 3537 4.760715 GGAGATGCGGTACAGTAGAGATAA 59.239 45.833 0.00 0.00 0.00 1.75
2214 3538 5.106475 GGAGATGCGGTACAGTAGAGATAAG 60.106 48.000 0.00 0.00 0.00 1.73
2215 3539 5.378332 AGATGCGGTACAGTAGAGATAAGT 58.622 41.667 0.00 0.00 0.00 2.24
2216 3540 6.531923 AGATGCGGTACAGTAGAGATAAGTA 58.468 40.000 0.00 0.00 0.00 2.24
2217 3541 7.169591 AGATGCGGTACAGTAGAGATAAGTAT 58.830 38.462 0.00 0.00 0.00 2.12
2218 3542 7.666388 AGATGCGGTACAGTAGAGATAAGTATT 59.334 37.037 0.00 0.00 0.00 1.89
2219 3543 7.578310 TGCGGTACAGTAGAGATAAGTATTT 57.422 36.000 0.00 0.00 0.00 1.40
2220 3544 8.004087 TGCGGTACAGTAGAGATAAGTATTTT 57.996 34.615 0.00 0.00 0.00 1.82
2221 3545 8.133627 TGCGGTACAGTAGAGATAAGTATTTTC 58.866 37.037 0.00 0.00 0.00 2.29
2222 3546 7.594386 GCGGTACAGTAGAGATAAGTATTTTCC 59.406 40.741 0.00 0.00 0.00 3.13
2223 3547 8.848182 CGGTACAGTAGAGATAAGTATTTTCCT 58.152 37.037 0.00 0.00 0.00 3.36
2227 3551 8.417884 ACAGTAGAGATAAGTATTTTCCTCAGC 58.582 37.037 0.00 0.00 0.00 4.26
2228 3552 7.593273 CAGTAGAGATAAGTATTTTCCTCAGCG 59.407 40.741 0.00 0.00 0.00 5.18
2229 3553 6.716934 AGAGATAAGTATTTTCCTCAGCGA 57.283 37.500 0.00 0.00 0.00 4.93
2230 3554 6.744112 AGAGATAAGTATTTTCCTCAGCGAG 58.256 40.000 0.00 0.00 0.00 5.03
2231 3555 6.547880 AGAGATAAGTATTTTCCTCAGCGAGA 59.452 38.462 7.07 0.00 0.00 4.04
2232 3556 7.068839 AGAGATAAGTATTTTCCTCAGCGAGAA 59.931 37.037 7.07 0.00 0.00 2.87
2233 3557 6.981559 AGATAAGTATTTTCCTCAGCGAGAAC 59.018 38.462 7.07 0.00 0.00 3.01
2234 3558 3.863041 AGTATTTTCCTCAGCGAGAACC 58.137 45.455 7.07 0.00 0.00 3.62
2235 3559 2.859165 ATTTTCCTCAGCGAGAACCA 57.141 45.000 7.07 0.00 0.00 3.67
2236 3560 2.631160 TTTTCCTCAGCGAGAACCAA 57.369 45.000 7.07 0.00 0.00 3.67
2237 3561 2.169832 TTTCCTCAGCGAGAACCAAG 57.830 50.000 7.07 0.00 0.00 3.61
2238 3562 0.321671 TTCCTCAGCGAGAACCAAGG 59.678 55.000 7.07 0.00 0.00 3.61
2239 3563 0.832135 TCCTCAGCGAGAACCAAGGT 60.832 55.000 7.07 0.00 0.00 3.50
2240 3564 0.035458 CCTCAGCGAGAACCAAGGTT 59.965 55.000 3.73 3.73 41.54 3.50
2241 3565 1.275291 CCTCAGCGAGAACCAAGGTTA 59.725 52.381 4.14 0.00 38.60 2.85
2242 3566 2.093447 CCTCAGCGAGAACCAAGGTTAT 60.093 50.000 4.14 0.85 38.60 1.89
2243 3567 3.190874 CTCAGCGAGAACCAAGGTTATC 58.809 50.000 14.91 14.91 41.35 1.75
2244 3568 2.565391 TCAGCGAGAACCAAGGTTATCA 59.435 45.455 22.18 4.32 43.93 2.15
2245 3569 3.007506 TCAGCGAGAACCAAGGTTATCAA 59.992 43.478 22.18 5.88 43.93 2.57
2246 3570 3.372206 CAGCGAGAACCAAGGTTATCAAG 59.628 47.826 22.18 10.91 43.93 3.02
2247 3571 3.260884 AGCGAGAACCAAGGTTATCAAGA 59.739 43.478 22.18 0.00 43.93 3.02
2248 3572 3.371285 GCGAGAACCAAGGTTATCAAGAC 59.629 47.826 22.18 8.24 43.93 3.01
2249 3573 4.566004 CGAGAACCAAGGTTATCAAGACA 58.434 43.478 22.18 0.00 43.93 3.41
2250 3574 4.994852 CGAGAACCAAGGTTATCAAGACAA 59.005 41.667 22.18 0.00 43.93 3.18
2251 3575 5.643777 CGAGAACCAAGGTTATCAAGACAAT 59.356 40.000 22.18 0.00 43.93 2.71
2252 3576 6.816640 CGAGAACCAAGGTTATCAAGACAATA 59.183 38.462 22.18 0.00 43.93 1.90
2253 3577 7.010552 CGAGAACCAAGGTTATCAAGACAATAG 59.989 40.741 22.18 3.54 43.93 1.73
2254 3578 7.112779 AGAACCAAGGTTATCAAGACAATAGG 58.887 38.462 4.14 0.00 38.60 2.57
2255 3579 6.636454 ACCAAGGTTATCAAGACAATAGGA 57.364 37.500 0.00 0.00 0.00 2.94
2256 3580 6.653989 ACCAAGGTTATCAAGACAATAGGAG 58.346 40.000 0.00 0.00 0.00 3.69
2257 3581 6.443849 ACCAAGGTTATCAAGACAATAGGAGA 59.556 38.462 0.00 0.00 0.00 3.71
2258 3582 7.037586 ACCAAGGTTATCAAGACAATAGGAGAA 60.038 37.037 0.00 0.00 0.00 2.87
2259 3583 7.281100 CCAAGGTTATCAAGACAATAGGAGAAC 59.719 40.741 0.00 0.00 32.35 3.01
2260 3584 6.890293 AGGTTATCAAGACAATAGGAGAACC 58.110 40.000 8.54 8.54 46.65 3.62
2261 3585 6.650120 GGTTATCAAGACAATAGGAGAACCA 58.350 40.000 11.02 0.00 45.95 3.67
2262 3586 7.110155 GGTTATCAAGACAATAGGAGAACCAA 58.890 38.462 11.02 0.00 45.95 3.67
2263 3587 7.281100 GGTTATCAAGACAATAGGAGAACCAAG 59.719 40.741 11.02 0.00 45.95 3.61
2264 3588 4.579869 TCAAGACAATAGGAGAACCAAGC 58.420 43.478 0.00 0.00 38.94 4.01
2265 3589 4.041567 TCAAGACAATAGGAGAACCAAGCA 59.958 41.667 0.00 0.00 38.94 3.91
2266 3590 4.640771 AGACAATAGGAGAACCAAGCAA 57.359 40.909 0.00 0.00 38.94 3.91
2267 3591 4.985538 AGACAATAGGAGAACCAAGCAAA 58.014 39.130 0.00 0.00 38.94 3.68
2268 3592 5.574188 AGACAATAGGAGAACCAAGCAAAT 58.426 37.500 0.00 0.00 38.94 2.32
2269 3593 6.012745 AGACAATAGGAGAACCAAGCAAATT 58.987 36.000 0.00 0.00 38.94 1.82
2270 3594 6.151817 AGACAATAGGAGAACCAAGCAAATTC 59.848 38.462 0.00 0.00 38.94 2.17
2271 3595 5.774690 ACAATAGGAGAACCAAGCAAATTCA 59.225 36.000 0.00 0.00 38.94 2.57
2272 3596 5.904362 ATAGGAGAACCAAGCAAATTCAC 57.096 39.130 0.00 0.00 38.94 3.18
2273 3597 3.837355 AGGAGAACCAAGCAAATTCACT 58.163 40.909 0.00 0.00 38.94 3.41
2274 3598 4.218312 AGGAGAACCAAGCAAATTCACTT 58.782 39.130 0.00 0.00 38.94 3.16
2275 3599 4.279420 AGGAGAACCAAGCAAATTCACTTC 59.721 41.667 0.00 0.00 38.94 3.01
2276 3600 4.037923 GGAGAACCAAGCAAATTCACTTCA 59.962 41.667 0.00 0.00 35.97 3.02
2277 3601 5.451798 GGAGAACCAAGCAAATTCACTTCAA 60.452 40.000 0.00 0.00 35.97 2.69
2278 3602 5.351458 AGAACCAAGCAAATTCACTTCAAC 58.649 37.500 0.00 0.00 0.00 3.18
2279 3603 4.734398 ACCAAGCAAATTCACTTCAACA 57.266 36.364 0.00 0.00 0.00 3.33
2280 3604 5.083533 ACCAAGCAAATTCACTTCAACAA 57.916 34.783 0.00 0.00 0.00 2.83
2281 3605 4.869861 ACCAAGCAAATTCACTTCAACAAC 59.130 37.500 0.00 0.00 0.00 3.32
2282 3606 4.869297 CCAAGCAAATTCACTTCAACAACA 59.131 37.500 0.00 0.00 0.00 3.33
2283 3607 5.220453 CCAAGCAAATTCACTTCAACAACAC 60.220 40.000 0.00 0.00 0.00 3.32
2284 3608 4.432712 AGCAAATTCACTTCAACAACACC 58.567 39.130 0.00 0.00 0.00 4.16
2285 3609 4.160252 AGCAAATTCACTTCAACAACACCT 59.840 37.500 0.00 0.00 0.00 4.00
2286 3610 5.359576 AGCAAATTCACTTCAACAACACCTA 59.640 36.000 0.00 0.00 0.00 3.08
2287 3611 6.040842 AGCAAATTCACTTCAACAACACCTAT 59.959 34.615 0.00 0.00 0.00 2.57
2288 3612 7.230510 AGCAAATTCACTTCAACAACACCTATA 59.769 33.333 0.00 0.00 0.00 1.31
2289 3613 7.326063 GCAAATTCACTTCAACAACACCTATAC 59.674 37.037 0.00 0.00 0.00 1.47
2290 3614 8.349245 CAAATTCACTTCAACAACACCTATACA 58.651 33.333 0.00 0.00 0.00 2.29
2291 3615 6.854496 TTCACTTCAACAACACCTATACAC 57.146 37.500 0.00 0.00 0.00 2.90
2292 3616 5.919755 TCACTTCAACAACACCTATACACA 58.080 37.500 0.00 0.00 0.00 3.72
2293 3617 5.756347 TCACTTCAACAACACCTATACACAC 59.244 40.000 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.608752 GGCCTTGTTTCATTCTGTGCAG 60.609 50.000 0.00 0.00 0.00 4.41
200 202 2.620115 ACCTGATTCACAACTGCACTTG 59.380 45.455 4.73 4.73 0.00 3.16
254 256 8.908786 AGAAAATGACTTGTGAATAGTTCTCA 57.091 30.769 0.00 0.00 0.00 3.27
291 293 8.798975 TCCATCCTTGTTATAGAATAGAACCT 57.201 34.615 0.00 0.00 41.84 3.50
292 294 9.847224 TTTCCATCCTTGTTATAGAATAGAACC 57.153 33.333 0.00 0.00 41.84 3.62
296 298 9.853177 ACCTTTTCCATCCTTGTTATAGAATAG 57.147 33.333 0.00 0.00 0.00 1.73
306 309 5.205056 TGTGTTAACCTTTTCCATCCTTGT 58.795 37.500 2.48 0.00 0.00 3.16
325 328 3.384467 AGTTTTTGCTGCTACCAATGTGT 59.616 39.130 0.00 0.00 0.00 3.72
344 347 8.789762 AGGTGACGCTATTTATTTTGTTTAGTT 58.210 29.630 0.00 0.00 0.00 2.24
362 365 1.519408 ACCACAAATACAGGTGACGC 58.481 50.000 0.00 0.00 37.18 5.19
392 395 9.643693 GATCCAATGTGTCTTCATATTGTTTTT 57.356 29.630 13.49 0.73 45.33 1.94
429 433 5.943416 TCTCTCCTTTTCTTTGTTTGTGTCA 59.057 36.000 0.00 0.00 0.00 3.58
548 817 2.512692 TTGGTATCATGTGCAAGCCT 57.487 45.000 0.00 0.00 0.00 4.58
552 821 5.981088 AATCACTTTGGTATCATGTGCAA 57.019 34.783 0.00 0.00 32.02 4.08
561 830 6.603201 CCTTGGTGTCATAATCACTTTGGTAT 59.397 38.462 0.00 0.00 36.25 2.73
582 851 6.712547 AGAAAGGACTTGTGAATAGTTCCTTG 59.287 38.462 1.53 0.00 35.37 3.61
749 1050 6.491062 TGCCACCTAATTAGTACTAATCGCTA 59.509 38.462 24.80 14.49 34.90 4.26
900 1261 2.570135 GGGAAATCTGATCTGTGCTCC 58.430 52.381 0.00 1.74 0.00 4.70
957 1319 0.529378 TTCCTTACCCGCTTCGTCTC 59.471 55.000 0.00 0.00 0.00 3.36
961 1323 2.000447 CTCTTTTCCTTACCCGCTTCG 59.000 52.381 0.00 0.00 0.00 3.79
973 1335 1.198408 CGGTAAAACCCGCTCTTTTCC 59.802 52.381 0.00 0.00 41.78 3.13
1080 1442 2.579684 AAGAGATGGCGGCGAACCTC 62.580 60.000 12.98 10.86 0.00 3.85
1286 1667 4.440250 CCAGATCCTTCGATTTCTACGTGT 60.440 45.833 0.00 0.00 0.00 4.49
1354 1746 9.807921 TGGACTCTTTCTTTTATCCTGTTAATT 57.192 29.630 0.00 0.00 0.00 1.40
1355 1747 9.981460 ATGGACTCTTTCTTTTATCCTGTTAAT 57.019 29.630 0.00 0.00 0.00 1.40
1356 1748 9.807921 AATGGACTCTTTCTTTTATCCTGTTAA 57.192 29.630 0.00 0.00 0.00 2.01
1358 1750 9.981460 ATAATGGACTCTTTCTTTTATCCTGTT 57.019 29.630 0.00 0.00 0.00 3.16
1359 1751 9.401058 CATAATGGACTCTTTCTTTTATCCTGT 57.599 33.333 0.00 0.00 0.00 4.00
1360 1752 9.618890 TCATAATGGACTCTTTCTTTTATCCTG 57.381 33.333 0.00 0.00 0.00 3.86
1366 1758 9.972106 AAGAGATCATAATGGACTCTTTCTTTT 57.028 29.630 0.00 0.00 42.68 2.27
1367 1759 9.612066 GAAGAGATCATAATGGACTCTTTCTTT 57.388 33.333 15.32 0.00 44.41 2.52
1368 1760 8.991275 AGAAGAGATCATAATGGACTCTTTCTT 58.009 33.333 15.32 0.00 44.41 2.52
1369 1761 8.551682 AGAAGAGATCATAATGGACTCTTTCT 57.448 34.615 15.32 12.09 44.41 2.52
1370 1762 8.641541 AGAGAAGAGATCATAATGGACTCTTTC 58.358 37.037 15.32 14.03 44.41 2.62
1401 1793 4.008330 AGAAGAGATGGTTTCGTAGTCGA 58.992 43.478 0.00 0.00 44.66 4.20
1402 1794 4.095185 AGAGAAGAGATGGTTTCGTAGTCG 59.905 45.833 0.00 0.00 38.55 4.18
1403 1795 5.570234 AGAGAAGAGATGGTTTCGTAGTC 57.430 43.478 0.00 0.00 0.00 2.59
1404 1796 5.712917 AGAAGAGAAGAGATGGTTTCGTAGT 59.287 40.000 0.00 0.00 0.00 2.73
1405 1797 6.094881 AGAGAAGAGAAGAGATGGTTTCGTAG 59.905 42.308 0.00 0.00 0.00 3.51
1406 1798 5.946972 AGAGAAGAGAAGAGATGGTTTCGTA 59.053 40.000 0.00 0.00 0.00 3.43
1407 1799 4.770010 AGAGAAGAGAAGAGATGGTTTCGT 59.230 41.667 0.00 0.00 0.00 3.85
1409 1801 5.422012 AGGAGAGAAGAGAAGAGATGGTTTC 59.578 44.000 0.00 0.00 0.00 2.78
1414 2303 8.469309 AAAGATAGGAGAGAAGAGAAGAGATG 57.531 38.462 0.00 0.00 0.00 2.90
1521 2844 9.583765 GTGATAGAGTAGGATTAGTTTTCGTTT 57.416 33.333 0.00 0.00 0.00 3.60
1524 2847 7.942990 AGGTGATAGAGTAGGATTAGTTTTCG 58.057 38.462 0.00 0.00 0.00 3.46
1532 2855 9.084533 GACTGATTTAGGTGATAGAGTAGGATT 57.915 37.037 0.00 0.00 0.00 3.01
1533 2856 7.672239 GGACTGATTTAGGTGATAGAGTAGGAT 59.328 40.741 0.00 0.00 0.00 3.24
1534 2857 7.005296 GGACTGATTTAGGTGATAGAGTAGGA 58.995 42.308 0.00 0.00 0.00 2.94
1535 2858 6.209788 GGGACTGATTTAGGTGATAGAGTAGG 59.790 46.154 0.00 0.00 0.00 3.18
1536 2859 7.007723 AGGGACTGATTTAGGTGATAGAGTAG 58.992 42.308 0.00 0.00 37.18 2.57
1537 2860 6.923670 AGGGACTGATTTAGGTGATAGAGTA 58.076 40.000 0.00 0.00 37.18 2.59
1538 2861 5.782925 AGGGACTGATTTAGGTGATAGAGT 58.217 41.667 0.00 0.00 37.18 3.24
1539 2862 5.245075 GGAGGGACTGATTTAGGTGATAGAG 59.755 48.000 0.00 0.00 41.55 2.43
1540 2863 5.148502 GGAGGGACTGATTTAGGTGATAGA 58.851 45.833 0.00 0.00 41.55 1.98
1541 2864 4.284746 GGGAGGGACTGATTTAGGTGATAG 59.715 50.000 0.00 0.00 41.55 2.08
1542 2865 4.232091 GGGAGGGACTGATTTAGGTGATA 58.768 47.826 0.00 0.00 41.55 2.15
1554 2877 1.597461 GAGGAAACGGGAGGGACTG 59.403 63.158 0.00 0.00 41.55 3.51
1557 2880 3.387947 GCGAGGAAACGGGAGGGA 61.388 66.667 0.00 0.00 0.00 4.20
1600 2923 2.818274 GTTGGTTCGCCCTAGCCG 60.818 66.667 0.00 0.00 36.08 5.52
1602 2925 1.745489 CAGGTTGGTTCGCCCTAGC 60.745 63.158 0.00 0.00 36.81 3.42
1603 2926 0.673644 CACAGGTTGGTTCGCCCTAG 60.674 60.000 0.00 0.00 36.08 3.02
1604 2927 1.373435 CACAGGTTGGTTCGCCCTA 59.627 57.895 0.00 0.00 36.08 3.53
1605 2928 2.113139 CACAGGTTGGTTCGCCCT 59.887 61.111 0.00 0.00 36.08 5.19
1606 2929 2.983592 CCACAGGTTGGTTCGCCC 60.984 66.667 0.00 0.00 41.10 6.13
1616 2939 4.386312 CCATATAACCATCCAACCACAGGT 60.386 45.833 0.00 0.00 37.65 4.00
1617 2940 4.141274 TCCATATAACCATCCAACCACAGG 60.141 45.833 0.00 0.00 0.00 4.00
1618 2941 4.821805 GTCCATATAACCATCCAACCACAG 59.178 45.833 0.00 0.00 0.00 3.66
1619 2942 4.228438 TGTCCATATAACCATCCAACCACA 59.772 41.667 0.00 0.00 0.00 4.17
1620 2943 4.787551 TGTCCATATAACCATCCAACCAC 58.212 43.478 0.00 0.00 0.00 4.16
1621 2944 4.476846 ACTGTCCATATAACCATCCAACCA 59.523 41.667 0.00 0.00 0.00 3.67
1622 2945 4.821805 CACTGTCCATATAACCATCCAACC 59.178 45.833 0.00 0.00 0.00 3.77
1623 2946 4.821805 CCACTGTCCATATAACCATCCAAC 59.178 45.833 0.00 0.00 0.00 3.77
1624 2947 4.476846 ACCACTGTCCATATAACCATCCAA 59.523 41.667 0.00 0.00 0.00 3.53
1625 2948 4.044308 ACCACTGTCCATATAACCATCCA 58.956 43.478 0.00 0.00 0.00 3.41
1626 2949 4.706842 ACCACTGTCCATATAACCATCC 57.293 45.455 0.00 0.00 0.00 3.51
1627 2950 7.246171 AGATACCACTGTCCATATAACCATC 57.754 40.000 0.00 0.00 0.00 3.51
1628 2951 6.213600 GGAGATACCACTGTCCATATAACCAT 59.786 42.308 0.00 0.00 38.79 3.55
1629 2952 5.542635 GGAGATACCACTGTCCATATAACCA 59.457 44.000 0.00 0.00 38.79 3.67
1630 2953 5.542635 TGGAGATACCACTGTCCATATAACC 59.457 44.000 0.00 0.00 44.64 2.85
1631 2954 6.665992 TGGAGATACCACTGTCCATATAAC 57.334 41.667 0.00 0.00 44.64 1.89
1632 2955 5.246203 GCTGGAGATACCACTGTCCATATAA 59.754 44.000 0.00 0.00 44.64 0.98
1633 2956 4.772624 GCTGGAGATACCACTGTCCATATA 59.227 45.833 0.00 0.00 44.64 0.86
1634 2957 3.580458 GCTGGAGATACCACTGTCCATAT 59.420 47.826 0.00 0.00 44.64 1.78
1635 2958 2.965831 GCTGGAGATACCACTGTCCATA 59.034 50.000 0.00 0.00 44.64 2.74
1636 2959 1.765314 GCTGGAGATACCACTGTCCAT 59.235 52.381 0.00 0.00 44.64 3.41
1637 2960 1.195115 GCTGGAGATACCACTGTCCA 58.805 55.000 0.00 0.00 44.64 4.02
1638 2961 0.466124 GGCTGGAGATACCACTGTCC 59.534 60.000 0.00 0.00 44.64 4.02
1639 2962 0.466124 GGGCTGGAGATACCACTGTC 59.534 60.000 0.00 0.00 44.64 3.51
1640 2963 0.252696 TGGGCTGGAGATACCACTGT 60.253 55.000 0.00 0.00 44.64 3.55
1641 2964 2.607811 TGGGCTGGAGATACCACTG 58.392 57.895 0.00 0.00 44.64 3.66
1645 2968 1.700042 CCTGGTGGGCTGGAGATACC 61.700 65.000 0.00 0.00 39.54 2.73
1646 2969 1.832912 CCTGGTGGGCTGGAGATAC 59.167 63.158 0.00 0.00 0.00 2.24
1647 2970 4.399764 CCTGGTGGGCTGGAGATA 57.600 61.111 0.00 0.00 0.00 1.98
1657 2980 1.538047 CATGAGTTGAACCCTGGTGG 58.462 55.000 0.00 0.00 41.37 4.61
1658 2981 1.202927 ACCATGAGTTGAACCCTGGTG 60.203 52.381 11.70 0.00 35.73 4.17
1659 2982 1.149101 ACCATGAGTTGAACCCTGGT 58.851 50.000 7.88 7.88 32.28 4.00
1660 2983 1.538047 CACCATGAGTTGAACCCTGG 58.462 55.000 0.00 6.81 0.00 4.45
1661 2984 0.883833 GCACCATGAGTTGAACCCTG 59.116 55.000 0.00 0.00 0.00 4.45
1662 2985 0.773644 AGCACCATGAGTTGAACCCT 59.226 50.000 0.00 0.00 0.00 4.34
1663 2986 1.168714 GAGCACCATGAGTTGAACCC 58.831 55.000 0.00 0.00 0.00 4.11
1664 2987 0.798776 CGAGCACCATGAGTTGAACC 59.201 55.000 0.00 0.00 0.00 3.62
1665 2988 0.166814 GCGAGCACCATGAGTTGAAC 59.833 55.000 0.00 0.00 0.00 3.18
1666 2989 0.250252 TGCGAGCACCATGAGTTGAA 60.250 50.000 0.00 0.00 0.00 2.69
1667 2990 0.036105 ATGCGAGCACCATGAGTTGA 60.036 50.000 0.00 0.00 0.00 3.18
1668 2991 0.806868 AATGCGAGCACCATGAGTTG 59.193 50.000 0.00 0.00 0.00 3.16
1669 2992 1.538047 AAATGCGAGCACCATGAGTT 58.462 45.000 0.00 0.00 0.00 3.01
1670 2993 2.401583 TAAATGCGAGCACCATGAGT 57.598 45.000 0.00 0.00 0.00 3.41
1671 2994 2.225019 GGATAAATGCGAGCACCATGAG 59.775 50.000 0.00 0.00 0.00 2.90
1672 2995 2.158769 AGGATAAATGCGAGCACCATGA 60.159 45.455 0.00 0.00 0.00 3.07
1673 2996 2.031420 CAGGATAAATGCGAGCACCATG 60.031 50.000 0.00 0.00 0.00 3.66
1674 2997 2.158769 TCAGGATAAATGCGAGCACCAT 60.159 45.455 0.00 0.00 0.00 3.55
1675 2998 1.209261 TCAGGATAAATGCGAGCACCA 59.791 47.619 0.00 0.00 0.00 4.17
1676 2999 1.953559 TCAGGATAAATGCGAGCACC 58.046 50.000 0.00 0.00 0.00 5.01
1677 3000 4.558538 AATTCAGGATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
1678 3001 6.882610 ATAAATTCAGGATAAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
1679 3002 8.579682 AAAATAAATTCAGGATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
1690 3013 9.581099 GCCGAAAATTCTAAAATAAATTCAGGA 57.419 29.630 0.00 0.00 0.00 3.86
1691 3014 8.531530 CGCCGAAAATTCTAAAATAAATTCAGG 58.468 33.333 0.00 0.00 0.00 3.86
1692 3015 9.284594 TCGCCGAAAATTCTAAAATAAATTCAG 57.715 29.630 0.00 0.00 0.00 3.02
1693 3016 9.796120 ATCGCCGAAAATTCTAAAATAAATTCA 57.204 25.926 0.00 0.00 0.00 2.57
1696 3019 9.377383 CGTATCGCCGAAAATTCTAAAATAAAT 57.623 29.630 0.00 0.00 0.00 1.40
1697 3020 8.756376 CGTATCGCCGAAAATTCTAAAATAAA 57.244 30.769 0.00 0.00 0.00 1.40
1716 3039 0.866061 CTCCCACTGAACGCGTATCG 60.866 60.000 14.46 6.07 45.38 2.92
1717 3040 0.527817 CCTCCCACTGAACGCGTATC 60.528 60.000 14.46 13.20 0.00 2.24
1718 3041 0.968901 TCCTCCCACTGAACGCGTAT 60.969 55.000 14.46 2.21 0.00 3.06
1719 3042 1.592400 CTCCTCCCACTGAACGCGTA 61.592 60.000 14.46 0.00 0.00 4.42
1720 3043 2.915659 TCCTCCCACTGAACGCGT 60.916 61.111 5.58 5.58 0.00 6.01
1721 3044 2.125912 CTCCTCCCACTGAACGCG 60.126 66.667 3.53 3.53 0.00 6.01
1722 3045 1.079750 GTCTCCTCCCACTGAACGC 60.080 63.158 0.00 0.00 0.00 4.84
1723 3046 1.213013 CGTCTCCTCCCACTGAACG 59.787 63.158 0.00 0.00 0.00 3.95
1724 3047 0.680061 AACGTCTCCTCCCACTGAAC 59.320 55.000 0.00 0.00 0.00 3.18
1725 3048 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
1726 3049 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
1727 3050 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
1728 3051 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
1732 3055 1.035932 TCGATGGGAACGTCTCCTCC 61.036 60.000 13.94 6.16 44.68 4.30
1733 3056 0.100861 GTCGATGGGAACGTCTCCTC 59.899 60.000 13.94 6.42 44.68 3.71
1734 3057 0.323542 AGTCGATGGGAACGTCTCCT 60.324 55.000 13.94 0.00 44.68 3.69
1735 3058 1.065251 GTAGTCGATGGGAACGTCTCC 59.935 57.143 7.90 7.90 44.51 3.71
1736 3059 1.267932 CGTAGTCGATGGGAACGTCTC 60.268 57.143 0.00 0.00 44.51 3.36
1737 3060 0.731417 CGTAGTCGATGGGAACGTCT 59.269 55.000 0.00 0.00 44.51 4.18
1738 3061 0.729116 TCGTAGTCGATGGGAACGTC 59.271 55.000 0.00 0.00 41.35 4.34
1739 3062 0.731417 CTCGTAGTCGATGGGAACGT 59.269 55.000 0.00 0.00 45.21 3.99
1740 3063 0.029035 CCTCGTAGTCGATGGGAACG 59.971 60.000 0.00 0.00 45.21 3.95
1741 3064 0.248949 GCCTCGTAGTCGATGGGAAC 60.249 60.000 0.00 0.00 45.21 3.62
1742 3065 1.721664 CGCCTCGTAGTCGATGGGAA 61.722 60.000 0.00 0.00 45.21 3.97
1743 3066 2.184830 CGCCTCGTAGTCGATGGGA 61.185 63.158 0.00 0.00 45.21 4.37
1744 3067 2.331805 CGCCTCGTAGTCGATGGG 59.668 66.667 0.00 0.00 45.21 4.00
1745 3068 2.353607 GCGCCTCGTAGTCGATGG 60.354 66.667 0.00 0.00 45.21 3.51
1746 3069 1.504647 TAGGCGCCTCGTAGTCGATG 61.505 60.000 36.73 0.00 45.21 3.84
1747 3070 1.227764 TAGGCGCCTCGTAGTCGAT 60.228 57.895 36.73 7.63 45.21 3.59
1748 3071 2.176273 GTAGGCGCCTCGTAGTCGA 61.176 63.158 36.73 10.36 44.12 4.20
1749 3072 2.327244 GTAGGCGCCTCGTAGTCG 59.673 66.667 36.73 0.00 38.55 4.18
1750 3073 2.327244 CGTAGGCGCCTCGTAGTC 59.673 66.667 36.73 15.88 0.00 2.59
1751 3074 3.207669 CCGTAGGCGCCTCGTAGT 61.208 66.667 36.73 11.27 46.14 2.73
1763 3086 3.834610 AGATTTCACGAAGTCACCGTAG 58.165 45.455 5.27 0.00 41.61 3.51
1764 3087 3.253921 TGAGATTTCACGAAGTCACCGTA 59.746 43.478 5.27 0.00 41.61 4.02
1765 3088 2.035449 TGAGATTTCACGAAGTCACCGT 59.965 45.455 5.27 0.00 41.61 4.83
1766 3089 2.672714 TGAGATTTCACGAAGTCACCG 58.327 47.619 5.27 0.00 41.61 4.94
1767 3090 4.307432 TCTTGAGATTTCACGAAGTCACC 58.693 43.478 5.27 0.00 41.61 4.02
1768 3091 5.635280 TCATCTTGAGATTTCACGAAGTCAC 59.365 40.000 5.27 0.00 35.52 3.67
1769 3092 5.783111 TCATCTTGAGATTTCACGAAGTCA 58.217 37.500 5.27 0.00 35.52 3.41
1770 3093 6.900568 ATCATCTTGAGATTTCACGAAGTC 57.099 37.500 0.00 0.00 35.52 3.01
1771 3094 7.984050 ACATATCATCTTGAGATTTCACGAAGT 59.016 33.333 0.00 0.00 35.52 3.01
1772 3095 8.362860 ACATATCATCTTGAGATTTCACGAAG 57.637 34.615 0.00 0.00 35.52 3.79
1773 3096 8.606602 CAACATATCATCTTGAGATTTCACGAA 58.393 33.333 0.00 0.00 35.52 3.85
1774 3097 7.225341 CCAACATATCATCTTGAGATTTCACGA 59.775 37.037 0.00 0.00 36.22 4.35
1775 3098 7.350467 CCAACATATCATCTTGAGATTTCACG 58.650 38.462 0.00 0.00 31.71 4.35
1776 3099 7.013083 AGCCAACATATCATCTTGAGATTTCAC 59.987 37.037 0.00 0.00 31.71 3.18
1777 3100 7.058525 AGCCAACATATCATCTTGAGATTTCA 58.941 34.615 0.00 0.00 31.21 2.69
1778 3101 7.228108 TGAGCCAACATATCATCTTGAGATTTC 59.772 37.037 0.00 0.00 31.21 2.17
1779 3102 7.058525 TGAGCCAACATATCATCTTGAGATTT 58.941 34.615 0.00 0.00 31.21 2.17
1780 3103 6.598503 TGAGCCAACATATCATCTTGAGATT 58.401 36.000 0.00 0.00 31.21 2.40
1781 3104 6.183361 ACTGAGCCAACATATCATCTTGAGAT 60.183 38.462 0.00 0.00 34.56 2.75
1782 3105 5.129980 ACTGAGCCAACATATCATCTTGAGA 59.870 40.000 0.00 0.00 0.00 3.27
1783 3106 5.366460 ACTGAGCCAACATATCATCTTGAG 58.634 41.667 0.00 0.00 0.00 3.02
1784 3107 5.363562 ACTGAGCCAACATATCATCTTGA 57.636 39.130 0.00 0.00 0.00 3.02
1785 3108 6.318144 AGAAACTGAGCCAACATATCATCTTG 59.682 38.462 0.00 0.00 0.00 3.02
1786 3109 6.421485 AGAAACTGAGCCAACATATCATCTT 58.579 36.000 0.00 0.00 0.00 2.40
1787 3110 5.999044 AGAAACTGAGCCAACATATCATCT 58.001 37.500 0.00 0.00 0.00 2.90
1788 3111 5.050499 CGAGAAACTGAGCCAACATATCATC 60.050 44.000 0.00 0.00 0.00 2.92
1789 3112 4.813161 CGAGAAACTGAGCCAACATATCAT 59.187 41.667 0.00 0.00 0.00 2.45
1790 3113 4.183865 CGAGAAACTGAGCCAACATATCA 58.816 43.478 0.00 0.00 0.00 2.15
1791 3114 3.557595 CCGAGAAACTGAGCCAACATATC 59.442 47.826 0.00 0.00 0.00 1.63
1792 3115 3.197766 TCCGAGAAACTGAGCCAACATAT 59.802 43.478 0.00 0.00 0.00 1.78
1793 3116 2.565391 TCCGAGAAACTGAGCCAACATA 59.435 45.455 0.00 0.00 0.00 2.29
1794 3117 1.347707 TCCGAGAAACTGAGCCAACAT 59.652 47.619 0.00 0.00 0.00 2.71
1795 3118 0.756294 TCCGAGAAACTGAGCCAACA 59.244 50.000 0.00 0.00 0.00 3.33
1796 3119 1.433534 CTCCGAGAAACTGAGCCAAC 58.566 55.000 0.00 0.00 0.00 3.77
1797 3120 0.321671 CCTCCGAGAAACTGAGCCAA 59.678 55.000 0.00 0.00 0.00 4.52
1798 3121 0.832135 ACCTCCGAGAAACTGAGCCA 60.832 55.000 0.00 0.00 0.00 4.75
1799 3122 0.390472 CACCTCCGAGAAACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
1800 3123 1.016653 GCACCTCCGAGAAACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
1801 3124 0.605589 AGCACCTCCGAGAAACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
1802 3125 0.603569 GAGCACCTCCGAGAAACTGA 59.396 55.000 0.00 0.00 0.00 3.41
1803 3126 0.318441 TGAGCACCTCCGAGAAACTG 59.682 55.000 0.00 0.00 0.00 3.16
1804 3127 1.270907 ATGAGCACCTCCGAGAAACT 58.729 50.000 0.00 0.00 0.00 2.66
1805 3128 2.961526 TATGAGCACCTCCGAGAAAC 57.038 50.000 0.00 0.00 0.00 2.78
1806 3129 2.168521 CCTTATGAGCACCTCCGAGAAA 59.831 50.000 0.00 0.00 0.00 2.52
1807 3130 1.757118 CCTTATGAGCACCTCCGAGAA 59.243 52.381 0.00 0.00 0.00 2.87
1808 3131 1.403814 CCTTATGAGCACCTCCGAGA 58.596 55.000 0.00 0.00 0.00 4.04
1809 3132 0.390860 CCCTTATGAGCACCTCCGAG 59.609 60.000 0.00 0.00 0.00 4.63
1810 3133 0.325296 ACCCTTATGAGCACCTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
1811 3134 1.341531 CTACCCTTATGAGCACCTCCG 59.658 57.143 0.00 0.00 0.00 4.63
1812 3135 1.694696 CCTACCCTTATGAGCACCTCC 59.305 57.143 0.00 0.00 0.00 4.30
1813 3136 2.679082 TCCTACCCTTATGAGCACCTC 58.321 52.381 0.00 0.00 0.00 3.85
1814 3137 2.868964 TCCTACCCTTATGAGCACCT 57.131 50.000 0.00 0.00 0.00 4.00
1815 3138 2.706190 ACATCCTACCCTTATGAGCACC 59.294 50.000 0.00 0.00 0.00 5.01
1816 3139 3.733337 CACATCCTACCCTTATGAGCAC 58.267 50.000 0.00 0.00 0.00 4.40
1817 3140 2.104792 GCACATCCTACCCTTATGAGCA 59.895 50.000 0.00 0.00 37.23 4.26
1818 3141 2.772287 GCACATCCTACCCTTATGAGC 58.228 52.381 0.00 0.00 31.75 4.26
1819 3142 2.365617 ACGCACATCCTACCCTTATGAG 59.634 50.000 0.00 0.00 0.00 2.90
1820 3143 2.394632 ACGCACATCCTACCCTTATGA 58.605 47.619 0.00 0.00 0.00 2.15
1821 3144 2.910688 ACGCACATCCTACCCTTATG 57.089 50.000 0.00 0.00 0.00 1.90
1822 3145 3.901844 ACATACGCACATCCTACCCTTAT 59.098 43.478 0.00 0.00 0.00 1.73
1823 3146 3.069016 CACATACGCACATCCTACCCTTA 59.931 47.826 0.00 0.00 0.00 2.69
1824 3147 2.116238 ACATACGCACATCCTACCCTT 58.884 47.619 0.00 0.00 0.00 3.95
1825 3148 1.412710 CACATACGCACATCCTACCCT 59.587 52.381 0.00 0.00 0.00 4.34
1826 3149 1.865865 CACATACGCACATCCTACCC 58.134 55.000 0.00 0.00 0.00 3.69
1827 3150 1.217882 GCACATACGCACATCCTACC 58.782 55.000 0.00 0.00 0.00 3.18
1828 3151 0.852777 CGCACATACGCACATCCTAC 59.147 55.000 0.00 0.00 0.00 3.18
1829 3152 0.458260 ACGCACATACGCACATCCTA 59.542 50.000 0.00 0.00 36.19 2.94
1830 3153 0.391130 AACGCACATACGCACATCCT 60.391 50.000 0.00 0.00 36.19 3.24
1831 3154 0.026285 GAACGCACATACGCACATCC 59.974 55.000 0.00 0.00 36.19 3.51
1832 3155 0.718904 TGAACGCACATACGCACATC 59.281 50.000 0.00 0.00 36.19 3.06
1833 3156 1.368641 ATGAACGCACATACGCACAT 58.631 45.000 0.00 0.00 36.19 3.21
1834 3157 1.997669 TATGAACGCACATACGCACA 58.002 45.000 0.00 0.00 36.19 4.57
1835 3158 2.348498 CCATATGAACGCACATACGCAC 60.348 50.000 3.65 0.00 35.91 5.34
1836 3159 1.864082 CCATATGAACGCACATACGCA 59.136 47.619 3.65 0.00 35.91 5.24
1837 3160 2.131972 TCCATATGAACGCACATACGC 58.868 47.619 3.65 0.00 35.91 4.42
1838 3161 3.987220 TCATCCATATGAACGCACATACG 59.013 43.478 3.65 0.00 39.20 3.06
1839 3162 4.991056 ACTCATCCATATGAACGCACATAC 59.009 41.667 3.65 0.00 41.57 2.39
1840 3163 4.990426 CACTCATCCATATGAACGCACATA 59.010 41.667 3.65 4.96 41.57 2.29
1841 3164 3.811497 CACTCATCCATATGAACGCACAT 59.189 43.478 3.65 0.94 41.57 3.21
1842 3165 3.197265 CACTCATCCATATGAACGCACA 58.803 45.455 3.65 0.00 41.57 4.57
1843 3166 3.198068 ACACTCATCCATATGAACGCAC 58.802 45.455 3.65 0.00 41.57 5.34
1844 3167 3.541996 ACACTCATCCATATGAACGCA 57.458 42.857 3.65 0.00 41.57 5.24
1845 3168 4.143030 GCATACACTCATCCATATGAACGC 60.143 45.833 3.65 0.00 41.57 4.84
1846 3169 4.090498 CGCATACACTCATCCATATGAACG 59.910 45.833 3.65 0.00 41.57 3.95
1847 3170 4.991056 ACGCATACACTCATCCATATGAAC 59.009 41.667 3.65 0.00 41.57 3.18
1848 3171 4.990426 CACGCATACACTCATCCATATGAA 59.010 41.667 3.65 0.00 41.57 2.57
1849 3172 4.039124 ACACGCATACACTCATCCATATGA 59.961 41.667 3.65 0.00 39.87 2.15
1850 3173 4.309933 ACACGCATACACTCATCCATATG 58.690 43.478 0.00 0.00 0.00 1.78
1851 3174 4.607293 ACACGCATACACTCATCCATAT 57.393 40.909 0.00 0.00 0.00 1.78
1852 3175 5.722021 ATACACGCATACACTCATCCATA 57.278 39.130 0.00 0.00 0.00 2.74
1853 3176 2.988010 ACACGCATACACTCATCCAT 57.012 45.000 0.00 0.00 0.00 3.41
1854 3177 5.722021 ATATACACGCATACACTCATCCA 57.278 39.130 0.00 0.00 0.00 3.41
1855 3178 7.480810 TCATATATACACGCATACACTCATCC 58.519 38.462 0.00 0.00 0.00 3.51
1856 3179 7.166638 GCTCATATATACACGCATACACTCATC 59.833 40.741 0.00 0.00 0.00 2.92
1857 3180 6.975197 GCTCATATATACACGCATACACTCAT 59.025 38.462 0.00 0.00 0.00 2.90
1858 3181 6.322491 GCTCATATATACACGCATACACTCA 58.678 40.000 0.00 0.00 0.00 3.41
1859 3182 5.452623 CGCTCATATATACACGCATACACTC 59.547 44.000 0.00 0.00 0.00 3.51
1860 3183 5.332707 CGCTCATATATACACGCATACACT 58.667 41.667 0.00 0.00 0.00 3.55
1861 3184 4.027621 GCGCTCATATATACACGCATACAC 60.028 45.833 16.19 0.00 45.25 2.90
1862 3185 4.102649 GCGCTCATATATACACGCATACA 58.897 43.478 16.19 0.00 45.25 2.29
1863 3186 4.677683 GCGCTCATATATACACGCATAC 57.322 45.455 16.19 0.00 45.25 2.39
1867 3190 2.222596 GCAAGCGCTCATATATACACGC 60.223 50.000 12.06 14.25 46.20 5.34
1868 3191 2.026860 CGCAAGCGCTCATATATACACG 59.973 50.000 12.06 0.00 35.30 4.49
1869 3192 2.987149 ACGCAAGCGCTCATATATACAC 59.013 45.455 12.06 0.00 44.19 2.90
1870 3193 3.297830 ACGCAAGCGCTCATATATACA 57.702 42.857 12.06 0.00 44.19 2.29
1871 3194 4.798907 ACATACGCAAGCGCTCATATATAC 59.201 41.667 12.06 0.00 44.19 1.47
1872 3195 4.993905 ACATACGCAAGCGCTCATATATA 58.006 39.130 12.06 0.00 44.19 0.86
1873 3196 3.849911 ACATACGCAAGCGCTCATATAT 58.150 40.909 12.06 4.29 44.19 0.86
1874 3197 3.297830 ACATACGCAAGCGCTCATATA 57.702 42.857 12.06 1.64 44.19 0.86
1875 3198 2.154854 ACATACGCAAGCGCTCATAT 57.845 45.000 12.06 3.50 44.19 1.78
1876 3199 2.034179 AGTACATACGCAAGCGCTCATA 59.966 45.455 12.06 0.81 44.19 2.15
1877 3200 1.202417 AGTACATACGCAAGCGCTCAT 60.202 47.619 12.06 0.00 44.19 2.90
1878 3201 0.172578 AGTACATACGCAAGCGCTCA 59.827 50.000 12.06 0.15 44.19 4.26
1879 3202 0.572590 CAGTACATACGCAAGCGCTC 59.427 55.000 12.06 0.00 44.19 5.03
1880 3203 0.172578 TCAGTACATACGCAAGCGCT 59.827 50.000 15.09 2.64 44.19 5.92
1881 3204 1.071239 CATCAGTACATACGCAAGCGC 60.071 52.381 15.09 0.00 44.19 5.92
1882 3205 2.193447 ACATCAGTACATACGCAAGCG 58.807 47.619 13.50 13.50 46.03 4.68
1883 3206 3.616821 TGAACATCAGTACATACGCAAGC 59.383 43.478 0.00 0.00 45.62 4.01
1885 3208 6.546972 TTTTGAACATCAGTACATACGCAA 57.453 33.333 0.00 0.00 0.00 4.85
1886 3209 6.546972 TTTTTGAACATCAGTACATACGCA 57.453 33.333 0.00 0.00 0.00 5.24
1906 3229 6.724893 AACCCTAGCCGCATTATTATTTTT 57.275 33.333 0.00 0.00 0.00 1.94
1907 3230 6.549736 AGAAACCCTAGCCGCATTATTATTTT 59.450 34.615 0.00 0.00 0.00 1.82
1908 3231 6.068670 AGAAACCCTAGCCGCATTATTATTT 58.931 36.000 0.00 0.00 0.00 1.40
1909 3232 5.631119 AGAAACCCTAGCCGCATTATTATT 58.369 37.500 0.00 0.00 0.00 1.40
1910 3233 5.242795 AGAAACCCTAGCCGCATTATTAT 57.757 39.130 0.00 0.00 0.00 1.28
1911 3234 4.699925 AGAAACCCTAGCCGCATTATTA 57.300 40.909 0.00 0.00 0.00 0.98
1912 3235 3.577805 AGAAACCCTAGCCGCATTATT 57.422 42.857 0.00 0.00 0.00 1.40
1913 3236 3.136626 AGAAGAAACCCTAGCCGCATTAT 59.863 43.478 0.00 0.00 0.00 1.28
1914 3237 2.504175 AGAAGAAACCCTAGCCGCATTA 59.496 45.455 0.00 0.00 0.00 1.90
1955 3278 4.680237 CTCCGTCACCTTGCGCCA 62.680 66.667 4.18 0.00 0.00 5.69
2009 3332 4.322804 GGACACACGAACTAAATCTACACG 59.677 45.833 0.00 0.00 0.00 4.49
2039 3362 0.744281 TCGCTATCGCCTCAACATCA 59.256 50.000 0.00 0.00 35.26 3.07
2099 3422 1.313772 TGGAACGAACACCAACATGG 58.686 50.000 0.00 0.00 45.02 3.66
2123 3446 2.167075 GCACTTTCAAAGCCTGCCATAT 59.833 45.455 0.00 0.00 0.00 1.78
2125 3448 0.319405 GCACTTTCAAAGCCTGCCAT 59.681 50.000 0.00 0.00 0.00 4.40
2140 3464 0.682852 TTACAAGTACCAGCCGCACT 59.317 50.000 0.00 0.00 0.00 4.40
2148 3472 6.436738 TCCCAACATAGTTTACAAGTACCA 57.563 37.500 0.00 0.00 0.00 3.25
2149 3473 7.933215 AATCCCAACATAGTTTACAAGTACC 57.067 36.000 0.00 0.00 0.00 3.34
2152 3476 8.364894 GGAAAAATCCCAACATAGTTTACAAGT 58.635 33.333 0.00 0.00 0.00 3.16
2153 3477 8.757164 GGAAAAATCCCAACATAGTTTACAAG 57.243 34.615 0.00 0.00 0.00 3.16
2168 3492 2.644676 CTCCTCTTCGGGAAAAATCCC 58.355 52.381 3.70 3.70 46.43 3.85
2169 3493 2.644676 CCTCCTCTTCGGGAAAAATCC 58.355 52.381 0.00 0.00 34.66 3.01
2170 3494 2.644676 CCCTCCTCTTCGGGAAAAATC 58.355 52.381 0.00 0.00 43.44 2.17
2171 3495 1.285078 CCCCTCCTCTTCGGGAAAAAT 59.715 52.381 0.00 0.00 43.44 1.82
2172 3496 0.696501 CCCCTCCTCTTCGGGAAAAA 59.303 55.000 0.00 0.00 43.44 1.94
2173 3497 0.178885 TCCCCTCCTCTTCGGGAAAA 60.179 55.000 0.00 0.00 43.06 2.29
2174 3498 0.617820 CTCCCCTCCTCTTCGGGAAA 60.618 60.000 0.00 0.00 45.33 3.13
2175 3499 1.001760 CTCCCCTCCTCTTCGGGAA 59.998 63.158 0.00 0.00 45.33 3.97
2176 3500 1.297409 ATCTCCCCTCCTCTTCGGGA 61.297 60.000 0.00 0.00 43.44 5.14
2177 3501 1.118356 CATCTCCCCTCCTCTTCGGG 61.118 65.000 0.00 0.00 40.29 5.14
2178 3502 1.753368 GCATCTCCCCTCCTCTTCGG 61.753 65.000 0.00 0.00 0.00 4.30
2179 3503 1.745264 GCATCTCCCCTCCTCTTCG 59.255 63.158 0.00 0.00 0.00 3.79
2180 3504 1.745264 CGCATCTCCCCTCCTCTTC 59.255 63.158 0.00 0.00 0.00 2.87
2181 3505 1.764054 CCGCATCTCCCCTCCTCTT 60.764 63.158 0.00 0.00 0.00 2.85
2182 3506 1.656092 TACCGCATCTCCCCTCCTCT 61.656 60.000 0.00 0.00 0.00 3.69
2183 3507 1.152525 TACCGCATCTCCCCTCCTC 60.153 63.158 0.00 0.00 0.00 3.71
2184 3508 1.457831 GTACCGCATCTCCCCTCCT 60.458 63.158 0.00 0.00 0.00 3.69
2185 3509 1.749334 CTGTACCGCATCTCCCCTCC 61.749 65.000 0.00 0.00 0.00 4.30
2186 3510 1.043673 ACTGTACCGCATCTCCCCTC 61.044 60.000 0.00 0.00 0.00 4.30
2187 3511 0.260816 TACTGTACCGCATCTCCCCT 59.739 55.000 0.00 0.00 0.00 4.79
2188 3512 0.674534 CTACTGTACCGCATCTCCCC 59.325 60.000 0.00 0.00 0.00 4.81
2189 3513 1.609555 CTCTACTGTACCGCATCTCCC 59.390 57.143 0.00 0.00 0.00 4.30
2190 3514 2.573369 TCTCTACTGTACCGCATCTCC 58.427 52.381 0.00 0.00 0.00 3.71
2191 3515 5.470777 ACTTATCTCTACTGTACCGCATCTC 59.529 44.000 0.00 0.00 0.00 2.75
2192 3516 5.378332 ACTTATCTCTACTGTACCGCATCT 58.622 41.667 0.00 0.00 0.00 2.90
2193 3517 5.692613 ACTTATCTCTACTGTACCGCATC 57.307 43.478 0.00 0.00 0.00 3.91
2194 3518 7.762588 AATACTTATCTCTACTGTACCGCAT 57.237 36.000 0.00 0.00 0.00 4.73
2195 3519 7.578310 AAATACTTATCTCTACTGTACCGCA 57.422 36.000 0.00 0.00 0.00 5.69
2196 3520 7.594386 GGAAAATACTTATCTCTACTGTACCGC 59.406 40.741 0.00 0.00 0.00 5.68
2197 3521 8.848182 AGGAAAATACTTATCTCTACTGTACCG 58.152 37.037 0.00 0.00 0.00 4.02
2201 3525 8.417884 GCTGAGGAAAATACTTATCTCTACTGT 58.582 37.037 0.00 0.00 0.00 3.55
2202 3526 7.593273 CGCTGAGGAAAATACTTATCTCTACTG 59.407 40.741 0.00 0.00 0.00 2.74
2203 3527 7.502895 TCGCTGAGGAAAATACTTATCTCTACT 59.497 37.037 0.00 0.00 0.00 2.57
2204 3528 7.649973 TCGCTGAGGAAAATACTTATCTCTAC 58.350 38.462 0.00 0.00 0.00 2.59
2205 3529 7.720074 TCTCGCTGAGGAAAATACTTATCTCTA 59.280 37.037 5.87 0.00 0.00 2.43
2206 3530 6.547880 TCTCGCTGAGGAAAATACTTATCTCT 59.452 38.462 5.87 0.00 0.00 3.10
2207 3531 6.740110 TCTCGCTGAGGAAAATACTTATCTC 58.260 40.000 5.87 0.00 0.00 2.75
2208 3532 6.716934 TCTCGCTGAGGAAAATACTTATCT 57.283 37.500 5.87 0.00 0.00 1.98
2209 3533 6.201234 GGTTCTCGCTGAGGAAAATACTTATC 59.799 42.308 5.87 0.00 0.00 1.75
2210 3534 6.049790 GGTTCTCGCTGAGGAAAATACTTAT 58.950 40.000 5.87 0.00 0.00 1.73
2211 3535 5.046878 TGGTTCTCGCTGAGGAAAATACTTA 60.047 40.000 5.87 0.00 0.00 2.24
2212 3536 4.254492 GGTTCTCGCTGAGGAAAATACTT 58.746 43.478 5.87 0.00 0.00 2.24
2213 3537 3.260884 TGGTTCTCGCTGAGGAAAATACT 59.739 43.478 5.87 0.00 0.00 2.12
2214 3538 3.596214 TGGTTCTCGCTGAGGAAAATAC 58.404 45.455 5.87 0.00 0.00 1.89
2215 3539 3.973206 TGGTTCTCGCTGAGGAAAATA 57.027 42.857 5.87 0.00 0.00 1.40
2216 3540 2.859165 TGGTTCTCGCTGAGGAAAAT 57.141 45.000 5.87 0.00 0.00 1.82
2217 3541 2.494059 CTTGGTTCTCGCTGAGGAAAA 58.506 47.619 5.87 0.00 0.00 2.29
2218 3542 1.270839 CCTTGGTTCTCGCTGAGGAAA 60.271 52.381 5.87 0.00 0.00 3.13
2219 3543 0.321671 CCTTGGTTCTCGCTGAGGAA 59.678 55.000 5.87 0.00 0.00 3.36
2220 3544 0.832135 ACCTTGGTTCTCGCTGAGGA 60.832 55.000 5.87 0.00 0.00 3.71
2221 3545 0.035458 AACCTTGGTTCTCGCTGAGG 59.965 55.000 0.00 0.00 0.00 3.86
2222 3546 2.743636 TAACCTTGGTTCTCGCTGAG 57.256 50.000 8.46 0.00 0.00 3.35
2223 3547 2.565391 TGATAACCTTGGTTCTCGCTGA 59.435 45.455 8.46 0.00 0.00 4.26
2224 3548 2.972625 TGATAACCTTGGTTCTCGCTG 58.027 47.619 8.46 0.00 0.00 5.18
2225 3549 3.260884 TCTTGATAACCTTGGTTCTCGCT 59.739 43.478 8.46 0.00 0.00 4.93
2226 3550 3.371285 GTCTTGATAACCTTGGTTCTCGC 59.629 47.826 8.46 0.00 0.00 5.03
2227 3551 4.566004 TGTCTTGATAACCTTGGTTCTCG 58.434 43.478 8.46 0.00 0.00 4.04
2228 3552 7.281100 CCTATTGTCTTGATAACCTTGGTTCTC 59.719 40.741 8.46 9.34 0.00 2.87
2229 3553 7.037586 TCCTATTGTCTTGATAACCTTGGTTCT 60.038 37.037 8.46 0.00 0.00 3.01
2230 3554 7.110155 TCCTATTGTCTTGATAACCTTGGTTC 58.890 38.462 8.46 0.00 0.00 3.62
2231 3555 7.027874 TCCTATTGTCTTGATAACCTTGGTT 57.972 36.000 10.11 10.11 0.00 3.67
2232 3556 6.443849 TCTCCTATTGTCTTGATAACCTTGGT 59.556 38.462 0.00 0.00 0.00 3.67
2233 3557 6.889198 TCTCCTATTGTCTTGATAACCTTGG 58.111 40.000 0.00 0.00 0.00 3.61
2234 3558 7.281100 GGTTCTCCTATTGTCTTGATAACCTTG 59.719 40.741 0.00 0.00 33.54 3.61
2235 3559 7.037586 TGGTTCTCCTATTGTCTTGATAACCTT 60.038 37.037 0.00 0.00 35.89 3.50
2236 3560 6.443849 TGGTTCTCCTATTGTCTTGATAACCT 59.556 38.462 0.00 0.00 35.89 3.50
2237 3561 6.650120 TGGTTCTCCTATTGTCTTGATAACC 58.350 40.000 0.00 0.00 35.61 2.85
2238 3562 7.201652 GCTTGGTTCTCCTATTGTCTTGATAAC 60.202 40.741 0.00 0.00 34.23 1.89
2239 3563 6.823689 GCTTGGTTCTCCTATTGTCTTGATAA 59.176 38.462 0.00 0.00 34.23 1.75
2240 3564 6.070251 TGCTTGGTTCTCCTATTGTCTTGATA 60.070 38.462 0.00 0.00 34.23 2.15
2241 3565 5.189180 GCTTGGTTCTCCTATTGTCTTGAT 58.811 41.667 0.00 0.00 34.23 2.57
2242 3566 4.041567 TGCTTGGTTCTCCTATTGTCTTGA 59.958 41.667 0.00 0.00 34.23 3.02
2243 3567 4.326826 TGCTTGGTTCTCCTATTGTCTTG 58.673 43.478 0.00 0.00 34.23 3.02
2244 3568 4.640771 TGCTTGGTTCTCCTATTGTCTT 57.359 40.909 0.00 0.00 34.23 3.01
2245 3569 4.640771 TTGCTTGGTTCTCCTATTGTCT 57.359 40.909 0.00 0.00 34.23 3.41
2246 3570 5.904362 ATTTGCTTGGTTCTCCTATTGTC 57.096 39.130 0.00 0.00 34.23 3.18
2247 3571 5.774690 TGAATTTGCTTGGTTCTCCTATTGT 59.225 36.000 0.00 0.00 34.23 2.71
2248 3572 6.071728 AGTGAATTTGCTTGGTTCTCCTATTG 60.072 38.462 0.00 0.00 34.23 1.90
2249 3573 6.012745 AGTGAATTTGCTTGGTTCTCCTATT 58.987 36.000 0.00 0.00 34.23 1.73
2250 3574 5.574188 AGTGAATTTGCTTGGTTCTCCTAT 58.426 37.500 0.00 0.00 34.23 2.57
2251 3575 4.985538 AGTGAATTTGCTTGGTTCTCCTA 58.014 39.130 0.00 0.00 34.23 2.94
2252 3576 3.837355 AGTGAATTTGCTTGGTTCTCCT 58.163 40.909 0.00 0.00 34.23 3.69
2253 3577 4.037923 TGAAGTGAATTTGCTTGGTTCTCC 59.962 41.667 1.00 0.00 0.00 3.71
2254 3578 5.186996 TGAAGTGAATTTGCTTGGTTCTC 57.813 39.130 1.00 0.00 0.00 2.87
2255 3579 5.105392 TGTTGAAGTGAATTTGCTTGGTTCT 60.105 36.000 1.00 0.00 0.00 3.01
2256 3580 5.108517 TGTTGAAGTGAATTTGCTTGGTTC 58.891 37.500 1.00 0.00 0.00 3.62
2257 3581 5.083533 TGTTGAAGTGAATTTGCTTGGTT 57.916 34.783 1.00 0.00 0.00 3.67
2258 3582 4.734398 TGTTGAAGTGAATTTGCTTGGT 57.266 36.364 1.00 0.00 0.00 3.67
2259 3583 4.869297 TGTTGTTGAAGTGAATTTGCTTGG 59.131 37.500 1.00 0.00 0.00 3.61
2260 3584 5.220453 GGTGTTGTTGAAGTGAATTTGCTTG 60.220 40.000 1.00 0.00 0.00 4.01
2261 3585 4.869861 GGTGTTGTTGAAGTGAATTTGCTT 59.130 37.500 0.00 0.00 0.00 3.91
2262 3586 4.160252 AGGTGTTGTTGAAGTGAATTTGCT 59.840 37.500 0.00 0.00 0.00 3.91
2263 3587 4.432712 AGGTGTTGTTGAAGTGAATTTGC 58.567 39.130 0.00 0.00 0.00 3.68
2264 3588 8.349245 TGTATAGGTGTTGTTGAAGTGAATTTG 58.651 33.333 0.00 0.00 0.00 2.32
2265 3589 8.349983 GTGTATAGGTGTTGTTGAAGTGAATTT 58.650 33.333 0.00 0.00 0.00 1.82
2266 3590 7.500892 TGTGTATAGGTGTTGTTGAAGTGAATT 59.499 33.333 0.00 0.00 0.00 2.17
2267 3591 6.995686 TGTGTATAGGTGTTGTTGAAGTGAAT 59.004 34.615 0.00 0.00 0.00 2.57
2268 3592 6.259167 GTGTGTATAGGTGTTGTTGAAGTGAA 59.741 38.462 0.00 0.00 0.00 3.18
2269 3593 5.756347 GTGTGTATAGGTGTTGTTGAAGTGA 59.244 40.000 0.00 0.00 0.00 3.41
2270 3594 5.985781 GTGTGTATAGGTGTTGTTGAAGTG 58.014 41.667 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.