Multiple sequence alignment - TraesCS7A01G373700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G373700 chr7A 100.000 3772 0 0 1 3772 546641561 546645332 0.000000e+00 6966.0
1 TraesCS7A01G373700 chr7A 95.813 812 32 1 2963 3772 646090016 646090827 0.000000e+00 1310.0
2 TraesCS7A01G373700 chr7A 94.545 55 3 0 3718 3772 35695328 35695274 6.710000e-13 86.1
3 TraesCS7A01G373700 chr7D 92.825 1352 81 11 1429 2778 449450267 449448930 0.000000e+00 1945.0
4 TraesCS7A01G373700 chr7D 94.364 763 38 4 2959 3718 13126557 13125797 0.000000e+00 1166.0
5 TraesCS7A01G373700 chr7D 95.169 414 16 3 977 1388 449450677 449450266 0.000000e+00 651.0
6 TraesCS7A01G373700 chr7D 79.464 672 98 17 11 649 401070434 401069770 1.240000e-119 440.0
7 TraesCS7A01G373700 chr7D 94.444 54 3 0 3719 3772 30383709 30383656 2.410000e-12 84.2
8 TraesCS7A01G373700 chr7B 91.843 1373 93 8 1430 2783 467253939 467252567 0.000000e+00 1897.0
9 TraesCS7A01G373700 chr7B 90.724 539 32 10 890 1426 467254574 467254052 0.000000e+00 702.0
10 TraesCS7A01G373700 chr7B 85.366 123 18 0 525 647 488607864 488607742 1.100000e-25 128.0
11 TraesCS7A01G373700 chr5A 96.064 813 32 0 2960 3772 662404268 662405080 0.000000e+00 1325.0
12 TraesCS7A01G373700 chr5A 78.267 681 116 10 1 651 68615762 68615084 3.510000e-110 409.0
13 TraesCS7A01G373700 chr5A 77.098 572 95 21 33 573 23730222 23729656 7.920000e-77 298.0
14 TraesCS7A01G373700 chr1D 95.466 816 31 2 2963 3772 299813274 299812459 0.000000e+00 1297.0
15 TraesCS7A01G373700 chr1A 95.443 812 35 2 2963 3772 12427190 12428001 0.000000e+00 1293.0
16 TraesCS7A01G373700 chr6A 95.432 810 35 2 2963 3772 97585184 97584377 0.000000e+00 1290.0
17 TraesCS7A01G373700 chr6A 95.309 810 38 0 2963 3772 21626342 21625533 0.000000e+00 1286.0
18 TraesCS7A01G373700 chr4B 94.226 814 45 1 2959 3770 451065400 451064587 0.000000e+00 1242.0
19 TraesCS7A01G373700 chr4B 84.711 242 35 2 1 240 168915830 168915589 1.350000e-59 241.0
20 TraesCS7A01G373700 chr6D 93.971 763 37 5 2959 3718 350206582 350207338 0.000000e+00 1146.0
21 TraesCS7A01G373700 chr6D 76.289 582 104 25 22 573 129936731 129937308 2.870000e-71 279.0
22 TraesCS7A01G373700 chr3B 78.399 662 128 5 3 649 540096094 540096755 2.100000e-112 416.0
23 TraesCS7A01G373700 chr1B 80.038 531 86 14 1 514 181150066 181149539 3.560000e-100 375.0
24 TraesCS7A01G373700 chr1B 78.056 319 62 7 290 605 9419260 9418947 1.070000e-45 195.0
25 TraesCS7A01G373700 chr1B 84.553 123 17 2 525 646 174362368 174362247 1.840000e-23 121.0
26 TraesCS7A01G373700 chr6B 77.744 665 97 22 1 617 692644728 692645389 9.960000e-96 361.0
27 TraesCS7A01G373700 chr6B 78.771 537 89 15 43 564 413951063 413950537 1.680000e-88 337.0
28 TraesCS7A01G373700 chr2D 76.143 700 111 26 1 649 360270104 360270798 2.190000e-82 316.0
29 TraesCS7A01G373700 chr5B 75.712 667 121 18 23 651 489976847 489977510 2.850000e-76 296.0
30 TraesCS7A01G373700 chr5B 72.953 684 131 36 1 649 146907601 146908265 4.970000e-44 189.0
31 TraesCS7A01G373700 chr5B 76.190 315 63 7 265 570 439278894 439278583 5.040000e-34 156.0
32 TraesCS7A01G373700 chr3D 76.825 548 96 22 57 574 162759562 162760108 2.870000e-71 279.0
33 TraesCS7A01G373700 chr4D 84.706 255 38 1 1 254 107729534 107729788 1.740000e-63 254.0
34 TraesCS7A01G373700 chr4D 86.719 128 14 3 525 651 302064699 302064574 5.080000e-29 139.0
35 TraesCS7A01G373700 chr3A 82.967 182 31 0 468 649 642114702 642114521 8.380000e-37 165.0
36 TraesCS7A01G373700 chr3A 89.796 49 5 0 274 322 59437598 59437550 3.150000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G373700 chr7A 546641561 546645332 3771 False 6966.0 6966 100.0000 1 3772 1 chr7A.!!$F1 3771
1 TraesCS7A01G373700 chr7A 646090016 646090827 811 False 1310.0 1310 95.8130 2963 3772 1 chr7A.!!$F2 809
2 TraesCS7A01G373700 chr7D 449448930 449450677 1747 True 1298.0 1945 93.9970 977 2778 2 chr7D.!!$R4 1801
3 TraesCS7A01G373700 chr7D 13125797 13126557 760 True 1166.0 1166 94.3640 2959 3718 1 chr7D.!!$R1 759
4 TraesCS7A01G373700 chr7D 401069770 401070434 664 True 440.0 440 79.4640 11 649 1 chr7D.!!$R3 638
5 TraesCS7A01G373700 chr7B 467252567 467254574 2007 True 1299.5 1897 91.2835 890 2783 2 chr7B.!!$R2 1893
6 TraesCS7A01G373700 chr5A 662404268 662405080 812 False 1325.0 1325 96.0640 2960 3772 1 chr5A.!!$F1 812
7 TraesCS7A01G373700 chr5A 68615084 68615762 678 True 409.0 409 78.2670 1 651 1 chr5A.!!$R2 650
8 TraesCS7A01G373700 chr5A 23729656 23730222 566 True 298.0 298 77.0980 33 573 1 chr5A.!!$R1 540
9 TraesCS7A01G373700 chr1D 299812459 299813274 815 True 1297.0 1297 95.4660 2963 3772 1 chr1D.!!$R1 809
10 TraesCS7A01G373700 chr1A 12427190 12428001 811 False 1293.0 1293 95.4430 2963 3772 1 chr1A.!!$F1 809
11 TraesCS7A01G373700 chr6A 97584377 97585184 807 True 1290.0 1290 95.4320 2963 3772 1 chr6A.!!$R2 809
12 TraesCS7A01G373700 chr6A 21625533 21626342 809 True 1286.0 1286 95.3090 2963 3772 1 chr6A.!!$R1 809
13 TraesCS7A01G373700 chr4B 451064587 451065400 813 True 1242.0 1242 94.2260 2959 3770 1 chr4B.!!$R2 811
14 TraesCS7A01G373700 chr6D 350206582 350207338 756 False 1146.0 1146 93.9710 2959 3718 1 chr6D.!!$F2 759
15 TraesCS7A01G373700 chr6D 129936731 129937308 577 False 279.0 279 76.2890 22 573 1 chr6D.!!$F1 551
16 TraesCS7A01G373700 chr3B 540096094 540096755 661 False 416.0 416 78.3990 3 649 1 chr3B.!!$F1 646
17 TraesCS7A01G373700 chr1B 181149539 181150066 527 True 375.0 375 80.0380 1 514 1 chr1B.!!$R3 513
18 TraesCS7A01G373700 chr6B 692644728 692645389 661 False 361.0 361 77.7440 1 617 1 chr6B.!!$F1 616
19 TraesCS7A01G373700 chr6B 413950537 413951063 526 True 337.0 337 78.7710 43 564 1 chr6B.!!$R1 521
20 TraesCS7A01G373700 chr2D 360270104 360270798 694 False 316.0 316 76.1430 1 649 1 chr2D.!!$F1 648
21 TraesCS7A01G373700 chr5B 489976847 489977510 663 False 296.0 296 75.7120 23 651 1 chr5B.!!$F2 628
22 TraesCS7A01G373700 chr3D 162759562 162760108 546 False 279.0 279 76.8250 57 574 1 chr3D.!!$F1 517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
734 816 0.044092 TTGGTGGGCTAGGGAGATGA 59.956 55.0 0.00 0.00 0.0 2.92 F
1939 2147 0.100146 ATAGGTTCTTCGACGCGGTC 59.900 55.0 12.47 4.73 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2654 2874 0.320771 GAAGCTCCCAGTCGAAGCAA 60.321 55.0 8.64 0.00 38.51 3.91 R
3735 3967 0.038166 CTACAACCCATGGTGCTGGT 59.962 55.0 11.73 4.13 35.34 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
184 211 2.829914 ATGCAATGCACCGGCGAT 60.830 55.556 11.23 0.00 43.04 4.58
240 298 1.002624 GGCAACGTCCTCCATTGGA 60.003 57.895 5.05 5.05 0.00 3.53
243 301 1.882352 GCAACGTCCTCCATTGGAACT 60.882 52.381 6.88 0.00 37.93 3.01
256 314 0.824595 TGGAACTTCGTCGTCCTCCA 60.825 55.000 1.81 3.37 0.00 3.86
329 398 1.544825 CCCGTCCCAGAGAGCTTTGA 61.545 60.000 0.00 0.00 0.00 2.69
338 407 1.203237 AGAGAGCTTTGACAGGGGAGA 60.203 52.381 0.00 0.00 0.00 3.71
348 417 1.846439 GACAGGGGAGAAATCCATGGA 59.154 52.381 18.88 18.88 40.05 3.41
355 428 2.511637 GGAGAAATCCATGGAGGGAGTT 59.488 50.000 21.33 6.13 46.99 3.01
384 464 0.970937 GGGATCAGAGGTGGACGACA 60.971 60.000 0.00 0.00 0.00 4.35
402 482 2.295602 AACGGTTATGGTCGGGGCT 61.296 57.895 0.00 0.00 0.00 5.19
416 496 3.070590 GTCGGGGCTGTGGTTTATATAGT 59.929 47.826 0.00 0.00 0.00 2.12
421 501 6.519382 CGGGGCTGTGGTTTATATAGTAATGA 60.519 42.308 0.00 0.00 0.00 2.57
447 527 3.975591 AGAGGGACGGACGGGTGA 61.976 66.667 0.00 0.00 0.00 4.02
605 687 3.118454 CCGCTTCAATGTCGGCGT 61.118 61.111 6.85 0.00 45.11 5.68
606 688 2.096406 CGCTTCAATGTCGGCGTG 59.904 61.111 6.85 0.00 42.23 5.34
617 699 2.431942 CGGCGTGAGTAAGCGGTT 60.432 61.111 4.76 4.76 31.63 4.44
620 702 3.023591 GCGTGAGTAAGCGGTTGCC 62.024 63.158 10.73 3.67 44.31 4.52
630 712 2.342279 CGGTTGCCTCCGTTCTGA 59.658 61.111 8.25 0.00 44.77 3.27
652 734 2.572812 GCATGAATGCGGGCACAA 59.427 55.556 0.00 0.00 44.67 3.33
653 735 1.079956 GCATGAATGCGGGCACAAA 60.080 52.632 0.00 0.00 44.67 2.83
654 736 0.460635 GCATGAATGCGGGCACAAAT 60.461 50.000 0.00 0.00 44.67 2.32
655 737 1.282817 CATGAATGCGGGCACAAATG 58.717 50.000 0.00 0.00 0.00 2.32
656 738 1.135053 CATGAATGCGGGCACAAATGA 60.135 47.619 0.00 0.00 0.00 2.57
657 739 1.184431 TGAATGCGGGCACAAATGAT 58.816 45.000 0.00 0.00 0.00 2.45
658 740 1.134753 TGAATGCGGGCACAAATGATC 59.865 47.619 0.00 0.00 0.00 2.92
659 741 1.406539 GAATGCGGGCACAAATGATCT 59.593 47.619 0.00 0.00 0.00 2.75
660 742 2.346766 ATGCGGGCACAAATGATCTA 57.653 45.000 0.00 0.00 0.00 1.98
661 743 1.667236 TGCGGGCACAAATGATCTAG 58.333 50.000 0.00 0.00 0.00 2.43
662 744 1.209261 TGCGGGCACAAATGATCTAGA 59.791 47.619 0.00 0.00 0.00 2.43
663 745 1.869767 GCGGGCACAAATGATCTAGAG 59.130 52.381 0.00 0.00 0.00 2.43
664 746 2.743183 GCGGGCACAAATGATCTAGAGT 60.743 50.000 0.00 0.00 0.00 3.24
665 747 3.492656 GCGGGCACAAATGATCTAGAGTA 60.493 47.826 0.00 0.00 0.00 2.59
666 748 4.800914 GCGGGCACAAATGATCTAGAGTAT 60.801 45.833 0.00 0.00 0.00 2.12
667 749 4.926238 CGGGCACAAATGATCTAGAGTATC 59.074 45.833 0.00 0.00 0.00 2.24
668 750 4.926238 GGGCACAAATGATCTAGAGTATCG 59.074 45.833 0.00 0.00 42.67 2.92
669 751 4.387256 GGCACAAATGATCTAGAGTATCGC 59.613 45.833 0.00 0.00 42.67 4.58
670 752 5.226396 GCACAAATGATCTAGAGTATCGCT 58.774 41.667 0.00 0.00 42.67 4.93
671 753 5.118357 GCACAAATGATCTAGAGTATCGCTG 59.882 44.000 0.00 0.00 42.67 5.18
672 754 6.442112 CACAAATGATCTAGAGTATCGCTGA 58.558 40.000 0.00 0.00 42.67 4.26
673 755 6.362016 CACAAATGATCTAGAGTATCGCTGAC 59.638 42.308 0.00 0.00 42.67 3.51
674 756 6.264292 ACAAATGATCTAGAGTATCGCTGACT 59.736 38.462 0.00 0.00 42.67 3.41
675 757 7.445707 ACAAATGATCTAGAGTATCGCTGACTA 59.554 37.037 0.00 0.00 42.67 2.59
676 758 8.458052 CAAATGATCTAGAGTATCGCTGACTAT 58.542 37.037 0.00 0.00 42.67 2.12
677 759 8.574251 AATGATCTAGAGTATCGCTGACTATT 57.426 34.615 0.00 0.00 42.67 1.73
678 760 7.987750 TGATCTAGAGTATCGCTGACTATTT 57.012 36.000 0.00 0.00 42.67 1.40
679 761 8.035165 TGATCTAGAGTATCGCTGACTATTTC 57.965 38.462 0.00 0.00 42.67 2.17
680 762 6.469139 TCTAGAGTATCGCTGACTATTTCG 57.531 41.667 0.00 0.00 42.67 3.46
681 763 4.491234 AGAGTATCGCTGACTATTTCGG 57.509 45.455 0.00 0.00 42.67 4.30
682 764 4.135306 AGAGTATCGCTGACTATTTCGGA 58.865 43.478 0.00 0.00 42.67 4.55
683 765 4.023878 AGAGTATCGCTGACTATTTCGGAC 60.024 45.833 0.00 0.00 42.67 4.79
684 766 2.121116 ATCGCTGACTATTTCGGACG 57.879 50.000 0.00 0.00 33.78 4.79
685 767 1.089112 TCGCTGACTATTTCGGACGA 58.911 50.000 0.00 0.00 37.03 4.20
686 768 1.469703 TCGCTGACTATTTCGGACGAA 59.530 47.619 2.62 2.62 36.69 3.85
687 769 2.095110 TCGCTGACTATTTCGGACGAAA 60.095 45.455 20.30 20.30 46.37 3.46
688 770 2.664568 CGCTGACTATTTCGGACGAAAA 59.335 45.455 21.60 11.37 45.60 2.29
689 771 3.241678 CGCTGACTATTTCGGACGAAAAG 60.242 47.826 21.60 19.77 45.60 2.27
690 772 3.483738 GCTGACTATTTCGGACGAAAAGC 60.484 47.826 21.60 19.99 45.60 3.51
691 773 3.655486 TGACTATTTCGGACGAAAAGCA 58.345 40.909 21.60 14.37 45.60 3.91
692 774 4.250464 TGACTATTTCGGACGAAAAGCAT 58.750 39.130 21.60 9.55 45.60 3.79
693 775 4.092821 TGACTATTTCGGACGAAAAGCATG 59.907 41.667 21.60 12.82 45.60 4.06
694 776 4.250464 ACTATTTCGGACGAAAAGCATGA 58.750 39.130 21.60 0.00 45.60 3.07
695 777 3.747099 ATTTCGGACGAAAAGCATGAG 57.253 42.857 21.60 0.00 45.60 2.90
696 778 2.163818 TTCGGACGAAAAGCATGAGT 57.836 45.000 4.47 0.00 0.00 3.41
697 779 1.428448 TCGGACGAAAAGCATGAGTG 58.572 50.000 0.00 0.00 0.00 3.51
698 780 5.433350 TTTCGGACGAAAAGCATGAGTGC 62.433 47.826 16.49 0.00 43.67 4.40
707 789 3.143675 GCATGAGTGCGAGGAAAGA 57.856 52.632 0.00 0.00 42.28 2.52
708 790 1.442769 GCATGAGTGCGAGGAAAGAA 58.557 50.000 0.00 0.00 42.28 2.52
709 791 1.396301 GCATGAGTGCGAGGAAAGAAG 59.604 52.381 0.00 0.00 42.28 2.85
710 792 2.005451 CATGAGTGCGAGGAAAGAAGG 58.995 52.381 0.00 0.00 0.00 3.46
711 793 0.321671 TGAGTGCGAGGAAAGAAGGG 59.678 55.000 0.00 0.00 0.00 3.95
712 794 0.391793 GAGTGCGAGGAAAGAAGGGG 60.392 60.000 0.00 0.00 0.00 4.79
713 795 1.128188 AGTGCGAGGAAAGAAGGGGT 61.128 55.000 0.00 0.00 0.00 4.95
714 796 0.250770 GTGCGAGGAAAGAAGGGGTT 60.251 55.000 0.00 0.00 0.00 4.11
715 797 0.476771 TGCGAGGAAAGAAGGGGTTT 59.523 50.000 0.00 0.00 0.00 3.27
716 798 1.133606 TGCGAGGAAAGAAGGGGTTTT 60.134 47.619 0.00 0.00 0.00 2.43
717 799 1.269723 GCGAGGAAAGAAGGGGTTTTG 59.730 52.381 0.00 0.00 0.00 2.44
718 800 1.886542 CGAGGAAAGAAGGGGTTTTGG 59.113 52.381 0.00 0.00 0.00 3.28
719 801 2.751816 CGAGGAAAGAAGGGGTTTTGGT 60.752 50.000 0.00 0.00 0.00 3.67
720 802 2.628178 GAGGAAAGAAGGGGTTTTGGTG 59.372 50.000 0.00 0.00 0.00 4.17
721 803 1.691976 GGAAAGAAGGGGTTTTGGTGG 59.308 52.381 0.00 0.00 0.00 4.61
722 804 1.691976 GAAAGAAGGGGTTTTGGTGGG 59.308 52.381 0.00 0.00 0.00 4.61
723 805 0.762842 AAGAAGGGGTTTTGGTGGGC 60.763 55.000 0.00 0.00 0.00 5.36
724 806 1.152333 GAAGGGGTTTTGGTGGGCT 60.152 57.895 0.00 0.00 0.00 5.19
725 807 0.113580 GAAGGGGTTTTGGTGGGCTA 59.886 55.000 0.00 0.00 0.00 3.93
726 808 0.114364 AAGGGGTTTTGGTGGGCTAG 59.886 55.000 0.00 0.00 0.00 3.42
727 809 1.304962 GGGGTTTTGGTGGGCTAGG 60.305 63.158 0.00 0.00 0.00 3.02
728 810 1.304962 GGGTTTTGGTGGGCTAGGG 60.305 63.158 0.00 0.00 0.00 3.53
729 811 1.771646 GGTTTTGGTGGGCTAGGGA 59.228 57.895 0.00 0.00 0.00 4.20
730 812 0.323451 GGTTTTGGTGGGCTAGGGAG 60.323 60.000 0.00 0.00 0.00 4.30
731 813 0.696501 GTTTTGGTGGGCTAGGGAGA 59.303 55.000 0.00 0.00 0.00 3.71
732 814 1.285078 GTTTTGGTGGGCTAGGGAGAT 59.715 52.381 0.00 0.00 0.00 2.75
733 815 0.918983 TTTGGTGGGCTAGGGAGATG 59.081 55.000 0.00 0.00 0.00 2.90
734 816 0.044092 TTGGTGGGCTAGGGAGATGA 59.956 55.000 0.00 0.00 0.00 2.92
735 817 0.399091 TGGTGGGCTAGGGAGATGAG 60.399 60.000 0.00 0.00 0.00 2.90
736 818 0.105453 GGTGGGCTAGGGAGATGAGA 60.105 60.000 0.00 0.00 0.00 3.27
737 819 1.692762 GGTGGGCTAGGGAGATGAGAA 60.693 57.143 0.00 0.00 0.00 2.87
738 820 1.691434 GTGGGCTAGGGAGATGAGAAG 59.309 57.143 0.00 0.00 0.00 2.85
739 821 0.684535 GGGCTAGGGAGATGAGAAGC 59.315 60.000 0.00 0.00 0.00 3.86
740 822 1.418334 GGCTAGGGAGATGAGAAGCA 58.582 55.000 0.00 0.00 0.00 3.91
741 823 1.977129 GGCTAGGGAGATGAGAAGCAT 59.023 52.381 0.00 0.00 40.77 3.79
742 824 2.289569 GGCTAGGGAGATGAGAAGCATG 60.290 54.545 0.00 0.00 37.34 4.06
743 825 2.871236 GCTAGGGAGATGAGAAGCATGC 60.871 54.545 10.51 10.51 37.34 4.06
744 826 1.210538 AGGGAGATGAGAAGCATGCA 58.789 50.000 21.98 0.00 37.34 3.96
745 827 1.775459 AGGGAGATGAGAAGCATGCAT 59.225 47.619 21.98 8.13 37.34 3.96
746 828 1.880675 GGGAGATGAGAAGCATGCATG 59.119 52.381 22.70 22.70 37.34 4.06
747 829 2.573369 GGAGATGAGAAGCATGCATGT 58.427 47.619 26.79 6.31 37.34 3.21
748 830 2.290916 GGAGATGAGAAGCATGCATGTG 59.709 50.000 26.79 5.68 37.34 3.21
749 831 3.203716 GAGATGAGAAGCATGCATGTGA 58.796 45.455 26.79 0.00 37.34 3.58
750 832 3.206964 AGATGAGAAGCATGCATGTGAG 58.793 45.455 26.79 2.78 37.34 3.51
751 833 2.484742 TGAGAAGCATGCATGTGAGT 57.515 45.000 26.79 10.62 0.00 3.41
752 834 2.081462 TGAGAAGCATGCATGTGAGTG 58.919 47.619 26.79 3.24 0.00 3.51
753 835 2.289819 TGAGAAGCATGCATGTGAGTGA 60.290 45.455 26.79 6.06 0.00 3.41
754 836 2.943690 GAGAAGCATGCATGTGAGTGAT 59.056 45.455 26.79 7.90 0.00 3.06
755 837 2.943690 AGAAGCATGCATGTGAGTGATC 59.056 45.455 26.79 14.16 0.00 2.92
756 838 1.676746 AGCATGCATGTGAGTGATCC 58.323 50.000 26.79 7.72 0.00 3.36
757 839 1.064979 AGCATGCATGTGAGTGATCCA 60.065 47.619 26.79 0.00 0.00 3.41
758 840 1.333931 GCATGCATGTGAGTGATCCAG 59.666 52.381 26.79 0.00 0.00 3.86
759 841 2.914059 CATGCATGTGAGTGATCCAGA 58.086 47.619 18.91 0.00 0.00 3.86
760 842 2.685850 TGCATGTGAGTGATCCAGAG 57.314 50.000 0.00 0.00 0.00 3.35
761 843 1.904537 TGCATGTGAGTGATCCAGAGT 59.095 47.619 0.00 0.00 0.00 3.24
762 844 2.093816 TGCATGTGAGTGATCCAGAGTC 60.094 50.000 0.00 0.00 0.00 3.36
763 845 2.741228 GCATGTGAGTGATCCAGAGTCC 60.741 54.545 0.00 0.00 0.00 3.85
764 846 2.612285 TGTGAGTGATCCAGAGTCCT 57.388 50.000 0.00 0.00 0.00 3.85
765 847 3.739401 TGTGAGTGATCCAGAGTCCTA 57.261 47.619 0.00 0.00 0.00 2.94
766 848 3.357203 TGTGAGTGATCCAGAGTCCTAC 58.643 50.000 0.00 0.00 0.00 3.18
767 849 3.245264 TGTGAGTGATCCAGAGTCCTACA 60.245 47.826 0.00 0.00 0.00 2.74
768 850 3.764434 GTGAGTGATCCAGAGTCCTACAA 59.236 47.826 0.00 0.00 0.00 2.41
769 851 4.220821 GTGAGTGATCCAGAGTCCTACAAA 59.779 45.833 0.00 0.00 0.00 2.83
770 852 4.464244 TGAGTGATCCAGAGTCCTACAAAG 59.536 45.833 0.00 0.00 0.00 2.77
771 853 4.421131 AGTGATCCAGAGTCCTACAAAGT 58.579 43.478 0.00 0.00 0.00 2.66
772 854 4.464597 AGTGATCCAGAGTCCTACAAAGTC 59.535 45.833 0.00 0.00 0.00 3.01
773 855 4.464597 GTGATCCAGAGTCCTACAAAGTCT 59.535 45.833 0.00 0.00 0.00 3.24
774 856 4.707448 TGATCCAGAGTCCTACAAAGTCTC 59.293 45.833 0.00 0.00 0.00 3.36
775 857 4.390129 TCCAGAGTCCTACAAAGTCTCT 57.610 45.455 0.00 0.00 34.55 3.10
776 858 4.082845 TCCAGAGTCCTACAAAGTCTCTG 58.917 47.826 11.89 11.89 42.78 3.35
777 859 3.367910 CCAGAGTCCTACAAAGTCTCTGC 60.368 52.174 13.00 0.00 42.35 4.26
778 860 3.256879 CAGAGTCCTACAAAGTCTCTGCA 59.743 47.826 7.40 0.00 40.07 4.41
779 861 4.081752 CAGAGTCCTACAAAGTCTCTGCAT 60.082 45.833 7.40 0.00 40.07 3.96
780 862 4.530161 AGAGTCCTACAAAGTCTCTGCATT 59.470 41.667 0.00 0.00 33.66 3.56
781 863 5.012561 AGAGTCCTACAAAGTCTCTGCATTT 59.987 40.000 0.00 0.00 33.66 2.32
782 864 6.211584 AGAGTCCTACAAAGTCTCTGCATTTA 59.788 38.462 0.00 0.00 33.66 1.40
783 865 6.951971 AGTCCTACAAAGTCTCTGCATTTAT 58.048 36.000 0.00 0.00 0.00 1.40
784 866 7.044798 AGTCCTACAAAGTCTCTGCATTTATC 58.955 38.462 0.00 0.00 0.00 1.75
785 867 7.044798 GTCCTACAAAGTCTCTGCATTTATCT 58.955 38.462 0.00 0.00 0.00 1.98
786 868 7.223777 GTCCTACAAAGTCTCTGCATTTATCTC 59.776 40.741 0.00 0.00 0.00 2.75
787 869 7.124901 TCCTACAAAGTCTCTGCATTTATCTCT 59.875 37.037 0.00 0.00 0.00 3.10
788 870 6.981762 ACAAAGTCTCTGCATTTATCTCTG 57.018 37.500 0.00 0.00 0.00 3.35
789 871 6.705302 ACAAAGTCTCTGCATTTATCTCTGA 58.295 36.000 0.00 0.00 0.00 3.27
790 872 7.337167 ACAAAGTCTCTGCATTTATCTCTGAT 58.663 34.615 0.00 0.00 0.00 2.90
791 873 7.828223 ACAAAGTCTCTGCATTTATCTCTGATT 59.172 33.333 0.00 0.00 0.00 2.57
792 874 8.675504 CAAAGTCTCTGCATTTATCTCTGATTT 58.324 33.333 0.00 0.00 0.00 2.17
793 875 7.789273 AGTCTCTGCATTTATCTCTGATTTG 57.211 36.000 0.00 0.00 0.00 2.32
794 876 7.337167 AGTCTCTGCATTTATCTCTGATTTGT 58.663 34.615 0.00 0.00 0.00 2.83
795 877 7.280428 AGTCTCTGCATTTATCTCTGATTTGTG 59.720 37.037 0.00 0.00 0.00 3.33
796 878 7.279536 GTCTCTGCATTTATCTCTGATTTGTGA 59.720 37.037 0.00 0.00 0.00 3.58
797 879 7.494952 TCTCTGCATTTATCTCTGATTTGTGAG 59.505 37.037 0.00 0.00 0.00 3.51
798 880 7.333323 TCTGCATTTATCTCTGATTTGTGAGA 58.667 34.615 0.00 0.00 42.56 3.27
799 881 7.494952 TCTGCATTTATCTCTGATTTGTGAGAG 59.505 37.037 0.00 0.00 41.80 3.20
800 882 7.333323 TGCATTTATCTCTGATTTGTGAGAGA 58.667 34.615 0.00 0.00 46.75 3.10
801 883 7.825761 TGCATTTATCTCTGATTTGTGAGAGAA 59.174 33.333 0.00 0.00 46.03 2.87
802 884 8.671921 GCATTTATCTCTGATTTGTGAGAGAAA 58.328 33.333 12.86 12.86 46.99 2.52
808 890 9.902684 ATCTCTGATTTGTGAGAGAAAATACAT 57.097 29.630 0.00 0.00 46.03 2.29
809 891 9.376075 TCTCTGATTTGTGAGAGAAAATACATC 57.624 33.333 0.00 0.00 41.41 3.06
810 892 8.498054 TCTGATTTGTGAGAGAAAATACATCC 57.502 34.615 0.00 0.00 0.00 3.51
811 893 7.278646 TCTGATTTGTGAGAGAAAATACATCCG 59.721 37.037 0.00 0.00 0.00 4.18
812 894 7.102993 TGATTTGTGAGAGAAAATACATCCGA 58.897 34.615 0.00 0.00 0.00 4.55
813 895 7.606073 TGATTTGTGAGAGAAAATACATCCGAA 59.394 33.333 0.00 0.00 0.00 4.30
814 896 7.921786 TTTGTGAGAGAAAATACATCCGAAT 57.078 32.000 0.00 0.00 0.00 3.34
815 897 7.921786 TTGTGAGAGAAAATACATCCGAATT 57.078 32.000 0.00 0.00 0.00 2.17
816 898 9.443323 TTTGTGAGAGAAAATACATCCGAATTA 57.557 29.630 0.00 0.00 0.00 1.40
817 899 8.420374 TGTGAGAGAAAATACATCCGAATTAC 57.580 34.615 0.00 0.00 0.00 1.89
818 900 7.222031 TGTGAGAGAAAATACATCCGAATTACG 59.778 37.037 0.00 0.00 42.18 3.18
819 901 6.200286 TGAGAGAAAATACATCCGAATTACGC 59.800 38.462 0.00 0.00 41.07 4.42
820 902 5.465724 AGAGAAAATACATCCGAATTACGCC 59.534 40.000 0.00 0.00 41.07 5.68
821 903 5.120399 AGAAAATACATCCGAATTACGCCA 58.880 37.500 0.00 0.00 41.07 5.69
822 904 4.806342 AAATACATCCGAATTACGCCAC 57.194 40.909 0.00 0.00 41.07 5.01
823 905 1.842720 TACATCCGAATTACGCCACG 58.157 50.000 0.00 0.00 41.07 4.94
824 906 0.108520 ACATCCGAATTACGCCACGT 60.109 50.000 0.00 0.00 44.35 4.49
825 907 1.134753 ACATCCGAATTACGCCACGTA 59.865 47.619 0.00 0.00 41.54 3.57
826 908 2.223876 ACATCCGAATTACGCCACGTAT 60.224 45.455 0.12 0.00 41.97 3.06
827 909 2.124011 TCCGAATTACGCCACGTATC 57.876 50.000 0.12 0.00 41.97 2.24
828 910 0.774098 CCGAATTACGCCACGTATCG 59.226 55.000 13.33 13.33 41.97 2.92
829 911 1.597690 CCGAATTACGCCACGTATCGA 60.598 52.381 19.05 0.00 43.09 3.59
830 912 2.313234 CGAATTACGCCACGTATCGAT 58.687 47.619 14.54 2.16 43.09 3.59
831 913 3.481839 CGAATTACGCCACGTATCGATA 58.518 45.455 14.54 0.00 43.09 2.92
832 914 3.296426 CGAATTACGCCACGTATCGATAC 59.704 47.826 23.03 23.03 43.09 2.24
833 915 3.902261 ATTACGCCACGTATCGATACA 57.098 42.857 29.69 12.27 41.97 2.29
834 916 2.955607 TACGCCACGTATCGATACAG 57.044 50.000 29.69 23.94 41.54 2.74
835 917 1.302366 ACGCCACGTATCGATACAGA 58.698 50.000 29.69 0.00 38.73 3.41
836 918 1.672363 ACGCCACGTATCGATACAGAA 59.328 47.619 29.69 0.00 38.73 3.02
837 919 2.292569 ACGCCACGTATCGATACAGAAT 59.707 45.455 29.69 12.99 38.73 2.40
838 920 2.909244 CGCCACGTATCGATACAGAATC 59.091 50.000 29.69 15.66 32.87 2.52
850 932 1.571919 ACAGAATCGCGTTGGATAGC 58.428 50.000 5.77 0.00 0.00 2.97
851 933 1.137086 ACAGAATCGCGTTGGATAGCT 59.863 47.619 5.77 0.00 0.00 3.32
852 934 2.205074 CAGAATCGCGTTGGATAGCTT 58.795 47.619 5.77 0.00 0.00 3.74
853 935 2.219674 CAGAATCGCGTTGGATAGCTTC 59.780 50.000 5.77 0.00 0.00 3.86
854 936 1.527311 GAATCGCGTTGGATAGCTTCC 59.473 52.381 5.77 0.00 45.69 3.46
870 952 4.849329 CCGCTGCGGTCCGTAGAC 62.849 72.222 30.64 20.17 41.80 2.59
871 953 3.812019 CGCTGCGGTCCGTAGACT 61.812 66.667 30.64 0.00 41.80 3.24
876 958 4.631773 CGGTCCGTAGACTGGAGA 57.368 61.111 2.08 0.00 44.44 3.71
877 959 3.097461 CGGTCCGTAGACTGGAGAT 57.903 57.895 2.08 0.00 44.44 2.75
878 960 0.945813 CGGTCCGTAGACTGGAGATC 59.054 60.000 2.08 0.00 44.44 2.75
879 961 1.320507 GGTCCGTAGACTGGAGATCC 58.679 60.000 0.00 0.00 43.05 3.36
880 962 0.945813 GTCCGTAGACTGGAGATCCG 59.054 60.000 0.00 0.00 40.10 4.18
881 963 0.818445 TCCGTAGACTGGAGATCCGC 60.818 60.000 0.00 0.00 39.43 5.54
882 964 1.101635 CCGTAGACTGGAGATCCGCA 61.102 60.000 0.00 0.00 39.43 5.69
883 965 0.309302 CGTAGACTGGAGATCCGCAG 59.691 60.000 0.00 0.00 39.43 5.18
884 966 1.681538 GTAGACTGGAGATCCGCAGA 58.318 55.000 0.00 0.00 39.43 4.26
885 967 2.235016 GTAGACTGGAGATCCGCAGAT 58.765 52.381 0.00 0.00 39.43 2.90
886 968 1.786937 AGACTGGAGATCCGCAGATT 58.213 50.000 0.00 0.00 39.43 2.40
887 969 1.686052 AGACTGGAGATCCGCAGATTC 59.314 52.381 0.00 0.00 39.43 2.52
888 970 1.410517 GACTGGAGATCCGCAGATTCA 59.589 52.381 0.00 0.00 39.43 2.57
903 985 4.711721 CAGATTCAAAGCGATCGTTCAAA 58.288 39.130 17.81 6.54 0.00 2.69
909 991 0.729116 AGCGATCGTTCAAAGCCATG 59.271 50.000 17.81 0.00 0.00 3.66
914 996 1.213537 CGTTCAAAGCCATGGCAGG 59.786 57.895 37.18 24.86 44.88 4.85
944 1026 2.836981 CCACTCTCCCTCATCTTGTCTT 59.163 50.000 0.00 0.00 0.00 3.01
955 1037 4.569943 TCATCTTGTCTTACTTGAGCACC 58.430 43.478 0.00 0.00 0.00 5.01
957 1039 2.069273 CTTGTCTTACTTGAGCACCGG 58.931 52.381 0.00 0.00 0.00 5.28
962 1044 3.605749 TACTTGAGCACCGGCAGCC 62.606 63.158 15.17 0.00 44.61 4.85
969 1051 2.903855 CACCGGCAGCCATCATCC 60.904 66.667 13.30 0.00 0.00 3.51
973 1055 4.575973 GGCAGCCATCATCCGCCT 62.576 66.667 6.55 0.00 39.73 5.52
975 1057 2.281345 CAGCCATCATCCGCCTCC 60.281 66.667 0.00 0.00 0.00 4.30
1008 1092 4.722700 ACCGTCACCATGGCTGCC 62.723 66.667 13.04 12.87 30.57 4.85
1018 1102 0.179051 CATGGCTGCCTCTTCTCCTC 60.179 60.000 21.03 0.00 0.00 3.71
1019 1103 1.344191 ATGGCTGCCTCTTCTCCTCC 61.344 60.000 21.03 0.00 0.00 4.30
1020 1104 2.741055 GGCTGCCTCTTCTCCTCCC 61.741 68.421 12.43 0.00 0.00 4.30
1021 1105 1.992277 GCTGCCTCTTCTCCTCCCA 60.992 63.158 0.00 0.00 0.00 4.37
1022 1106 1.557269 GCTGCCTCTTCTCCTCCCAA 61.557 60.000 0.00 0.00 0.00 4.12
1023 1107 0.540923 CTGCCTCTTCTCCTCCCAAG 59.459 60.000 0.00 0.00 0.00 3.61
1024 1108 0.178891 TGCCTCTTCTCCTCCCAAGT 60.179 55.000 0.00 0.00 0.00 3.16
1038 1122 0.405585 CCAAGTCCCAACCCATCACT 59.594 55.000 0.00 0.00 0.00 3.41
1066 1157 0.309922 TCTTCCGCCGCTCGTATTAG 59.690 55.000 0.00 0.00 36.19 1.73
1105 1196 4.090090 TCTCCTCTACTTGTTCTTCAGGG 58.910 47.826 0.00 0.00 0.00 4.45
1385 1476 5.061064 GCAAGTGTGTAGTTCGAATCTGTAG 59.939 44.000 0.00 0.00 0.00 2.74
1396 1487 7.306953 AGTTCGAATCTGTAGTTCTGTACTTC 58.693 38.462 0.00 0.00 38.33 3.01
1409 1500 7.343357 AGTTCTGTACTTCTCTAGCTCTACAT 58.657 38.462 0.00 0.00 31.29 2.29
1420 1511 3.883830 AGCTCTACATCCACTCACAAG 57.116 47.619 0.00 0.00 0.00 3.16
1426 1517 2.329267 ACATCCACTCACAAGTCCTCA 58.671 47.619 0.00 0.00 31.71 3.86
1427 1518 2.705658 ACATCCACTCACAAGTCCTCAA 59.294 45.455 0.00 0.00 31.71 3.02
1469 1674 5.723672 ATCGGATATGAACGTACTTGGAT 57.276 39.130 0.00 0.00 0.00 3.41
1470 1675 4.866921 TCGGATATGAACGTACTTGGATG 58.133 43.478 0.00 0.00 0.00 3.51
1471 1676 4.340097 TCGGATATGAACGTACTTGGATGT 59.660 41.667 0.00 0.00 0.00 3.06
1472 1677 5.047847 CGGATATGAACGTACTTGGATGTT 58.952 41.667 0.00 0.00 0.00 2.71
1474 1679 5.277345 GGATATGAACGTACTTGGATGTTGC 60.277 44.000 0.00 0.00 0.00 4.17
1642 1850 4.021925 GCAGAGGTGGACCGCCTT 62.022 66.667 27.44 14.42 45.19 4.35
1848 2056 4.885157 GGACTTCTTCCCGTCGTC 57.115 61.111 0.00 0.00 38.70 4.20
1939 2147 0.100146 ATAGGTTCTTCGACGCGGTC 59.900 55.000 12.47 4.73 0.00 4.79
1954 2162 1.078759 CGGTCATCGACAAGCACCTC 61.079 60.000 0.00 0.00 42.43 3.85
1999 2207 1.153549 GCAGGAGGACATGGTCGAC 60.154 63.158 7.13 7.13 32.65 4.20
2033 2241 0.475906 GTGGAGGGATCAAGATGGGG 59.524 60.000 0.00 0.00 0.00 4.96
2077 2285 3.220110 CATCAAGGGAATCCTGATGGTG 58.780 50.000 18.56 9.87 44.07 4.17
2078 2286 1.064463 TCAAGGGAATCCTGATGGTGC 60.064 52.381 0.00 0.00 44.07 5.01
2128 2347 6.821665 TCAGTTACTGCTAATATTGGACAACC 59.178 38.462 7.61 0.00 0.00 3.77
2146 2366 4.393062 ACAACCGATGTCACAGAATTCATC 59.607 41.667 8.44 0.51 37.96 2.92
2183 2403 1.597027 GGATACATTCGCCGGTGGG 60.597 63.158 16.49 7.91 0.00 4.61
2195 2415 2.100631 CGGTGGGATCGACACTTGC 61.101 63.158 15.87 2.78 38.83 4.01
2201 2421 1.417592 GATCGACACTTGCGCTGTG 59.582 57.895 24.72 24.72 40.87 3.66
2204 2424 2.546321 GACACTTGCGCTGTGACG 59.454 61.111 30.14 12.57 38.65 4.35
2270 2490 2.678934 AAGGCGCAGTCGGAGGTA 60.679 61.111 10.83 0.00 36.95 3.08
2312 2532 4.705337 ATCCAGAGTGTACGAAGAAGAC 57.295 45.455 0.00 0.00 0.00 3.01
2318 2538 0.242825 TGTACGAAGAAGACGCCCAG 59.757 55.000 0.00 0.00 0.00 4.45
2369 2589 1.376037 GAACTTCAGGCTCCACCCG 60.376 63.158 0.00 0.00 40.58 5.28
2387 2607 4.247380 CCGGGGCCTCTGCTGATC 62.247 72.222 0.00 0.00 37.74 2.92
2396 2616 1.413445 CCTCTGCTGATCCCAAGAGAG 59.587 57.143 14.16 7.10 31.92 3.20
2456 2676 4.515404 GGCACCAGGATACACGTC 57.485 61.111 0.00 0.00 41.41 4.34
2525 2745 1.740664 GTTCTTCCCCGAGCGGTTC 60.741 63.158 8.25 0.00 0.00 3.62
2552 2772 1.315257 CGCAGGTTGATTTCAGGGGG 61.315 60.000 0.00 0.00 0.00 5.40
2645 2865 3.050275 GAGGTCGTGCTGGCCAAC 61.050 66.667 7.01 1.82 0.00 3.77
2654 2874 0.112218 TGCTGGCCAACCTGTTGTAT 59.888 50.000 7.01 0.00 38.85 2.29
2697 2917 2.504244 GCGTGAAGGAGGACGACG 60.504 66.667 0.00 0.00 37.81 5.12
2730 2950 1.484038 AACAGGGCAGCTTGTTTTCA 58.516 45.000 9.24 0.00 34.00 2.69
2741 2961 3.118542 GCTTGTTTTCAGCAAGAAGGTG 58.881 45.455 8.95 0.00 44.29 4.00
2756 2976 0.250640 AGGTGGCTCTTGAGCTTGTG 60.251 55.000 20.12 0.00 34.73 3.33
2759 2979 1.601759 GGCTCTTGAGCTTGTGCCA 60.602 57.895 20.12 0.00 41.06 4.92
2780 3000 5.739358 GCCAGTTAAGCGGTAGTGATATCTT 60.739 44.000 3.98 0.00 0.00 2.40
2783 3003 7.280205 CCAGTTAAGCGGTAGTGATATCTTTTT 59.720 37.037 3.98 0.00 0.00 1.94
2837 3057 8.790718 AGTGATATCTCATATGTTTCAAATGCC 58.209 33.333 3.98 0.00 32.98 4.40
2838 3058 8.570488 GTGATATCTCATATGTTTCAAATGCCA 58.430 33.333 3.98 0.00 32.98 4.92
2839 3059 8.570488 TGATATCTCATATGTTTCAAATGCCAC 58.430 33.333 3.98 0.00 0.00 5.01
2840 3060 5.581126 TCTCATATGTTTCAAATGCCACC 57.419 39.130 1.90 0.00 0.00 4.61
2841 3061 5.263599 TCTCATATGTTTCAAATGCCACCT 58.736 37.500 1.90 0.00 0.00 4.00
2842 3062 6.422333 TCTCATATGTTTCAAATGCCACCTA 58.578 36.000 1.90 0.00 0.00 3.08
2843 3063 6.543465 TCTCATATGTTTCAAATGCCACCTAG 59.457 38.462 1.90 0.00 0.00 3.02
2844 3064 6.186957 TCATATGTTTCAAATGCCACCTAGT 58.813 36.000 1.90 0.00 0.00 2.57
2845 3065 4.789012 ATGTTTCAAATGCCACCTAGTG 57.211 40.909 0.00 0.00 0.00 2.74
2846 3066 2.295909 TGTTTCAAATGCCACCTAGTGC 59.704 45.455 0.00 0.00 31.34 4.40
2847 3067 2.558359 GTTTCAAATGCCACCTAGTGCT 59.442 45.455 0.00 0.00 31.34 4.40
2848 3068 2.584835 TCAAATGCCACCTAGTGCTT 57.415 45.000 0.00 0.00 31.34 3.91
2849 3069 2.436417 TCAAATGCCACCTAGTGCTTC 58.564 47.619 0.00 0.00 31.34 3.86
2850 3070 1.474077 CAAATGCCACCTAGTGCTTCC 59.526 52.381 0.00 0.00 31.34 3.46
2851 3071 0.995024 AATGCCACCTAGTGCTTCCT 59.005 50.000 0.00 0.00 31.34 3.36
2852 3072 0.543749 ATGCCACCTAGTGCTTCCTC 59.456 55.000 0.00 0.00 31.34 3.71
2853 3073 0.835971 TGCCACCTAGTGCTTCCTCA 60.836 55.000 0.00 0.00 31.34 3.86
2854 3074 0.324943 GCCACCTAGTGCTTCCTCAA 59.675 55.000 0.00 0.00 31.34 3.02
2855 3075 1.065126 GCCACCTAGTGCTTCCTCAAT 60.065 52.381 0.00 0.00 31.34 2.57
2856 3076 2.170607 GCCACCTAGTGCTTCCTCAATA 59.829 50.000 0.00 0.00 31.34 1.90
2857 3077 3.370527 GCCACCTAGTGCTTCCTCAATAA 60.371 47.826 0.00 0.00 31.34 1.40
2858 3078 4.843728 CCACCTAGTGCTTCCTCAATAAA 58.156 43.478 0.00 0.00 31.34 1.40
2859 3079 4.636206 CCACCTAGTGCTTCCTCAATAAAC 59.364 45.833 0.00 0.00 31.34 2.01
2860 3080 5.491982 CACCTAGTGCTTCCTCAATAAACT 58.508 41.667 0.00 0.00 0.00 2.66
2861 3081 6.351881 CCACCTAGTGCTTCCTCAATAAACTA 60.352 42.308 0.00 0.00 31.34 2.24
2862 3082 7.103641 CACCTAGTGCTTCCTCAATAAACTAA 58.896 38.462 0.00 0.00 0.00 2.24
2863 3083 7.606456 CACCTAGTGCTTCCTCAATAAACTAAA 59.394 37.037 0.00 0.00 0.00 1.85
2864 3084 7.606839 ACCTAGTGCTTCCTCAATAAACTAAAC 59.393 37.037 0.00 0.00 0.00 2.01
2865 3085 7.606456 CCTAGTGCTTCCTCAATAAACTAAACA 59.394 37.037 0.00 0.00 0.00 2.83
2866 3086 7.440523 AGTGCTTCCTCAATAAACTAAACAG 57.559 36.000 0.00 0.00 0.00 3.16
2867 3087 6.998673 AGTGCTTCCTCAATAAACTAAACAGT 59.001 34.615 0.00 0.00 0.00 3.55
2868 3088 8.154856 AGTGCTTCCTCAATAAACTAAACAGTA 58.845 33.333 0.00 0.00 0.00 2.74
2869 3089 8.443937 GTGCTTCCTCAATAAACTAAACAGTAG 58.556 37.037 0.00 0.00 0.00 2.57
2870 3090 8.154856 TGCTTCCTCAATAAACTAAACAGTAGT 58.845 33.333 0.00 0.00 0.00 2.73
2871 3091 9.000486 GCTTCCTCAATAAACTAAACAGTAGTT 58.000 33.333 0.00 0.00 39.24 2.24
2900 3120 9.753674 AATCTCAAATATAAGAACAACCTTCCA 57.246 29.630 0.00 0.00 0.00 3.53
2901 3121 8.792830 TCTCAAATATAAGAACAACCTTCCAG 57.207 34.615 0.00 0.00 0.00 3.86
2902 3122 8.383175 TCTCAAATATAAGAACAACCTTCCAGT 58.617 33.333 0.00 0.00 0.00 4.00
2903 3123 8.934023 TCAAATATAAGAACAACCTTCCAGTT 57.066 30.769 0.00 0.00 0.00 3.16
2909 3129 3.382083 AACAACCTTCCAGTTGGTCTT 57.618 42.857 9.05 0.00 44.30 3.01
2910 3130 3.023832 AACAACCTTCCAGTTGGTCTTG 58.976 45.455 9.05 0.00 44.30 3.02
2911 3131 1.338020 CAACCTTCCAGTTGGTCTTGC 59.662 52.381 0.00 0.00 42.79 4.01
2912 3132 0.535102 ACCTTCCAGTTGGTCTTGCG 60.535 55.000 0.00 0.00 36.34 4.85
2913 3133 0.535102 CCTTCCAGTTGGTCTTGCGT 60.535 55.000 0.00 0.00 36.34 5.24
2914 3134 0.588252 CTTCCAGTTGGTCTTGCGTG 59.412 55.000 0.00 0.00 36.34 5.34
2915 3135 0.179234 TTCCAGTTGGTCTTGCGTGA 59.821 50.000 0.00 0.00 36.34 4.35
2916 3136 0.249868 TCCAGTTGGTCTTGCGTGAG 60.250 55.000 0.00 0.00 36.34 3.51
2917 3137 0.532862 CCAGTTGGTCTTGCGTGAGT 60.533 55.000 0.00 0.00 0.00 3.41
2918 3138 1.270094 CCAGTTGGTCTTGCGTGAGTA 60.270 52.381 0.00 0.00 0.00 2.59
2919 3139 2.479837 CAGTTGGTCTTGCGTGAGTAA 58.520 47.619 0.00 0.00 0.00 2.24
2920 3140 2.221055 CAGTTGGTCTTGCGTGAGTAAC 59.779 50.000 0.00 0.00 0.00 2.50
2921 3141 2.159014 AGTTGGTCTTGCGTGAGTAACA 60.159 45.455 0.00 0.00 0.00 2.41
2922 3142 2.605837 TGGTCTTGCGTGAGTAACAA 57.394 45.000 0.00 0.00 0.00 2.83
2923 3143 2.907634 TGGTCTTGCGTGAGTAACAAA 58.092 42.857 0.00 0.00 0.00 2.83
2924 3144 3.271729 TGGTCTTGCGTGAGTAACAAAA 58.728 40.909 0.00 0.00 0.00 2.44
2925 3145 3.880490 TGGTCTTGCGTGAGTAACAAAAT 59.120 39.130 0.00 0.00 0.00 1.82
2926 3146 5.057819 TGGTCTTGCGTGAGTAACAAAATA 58.942 37.500 0.00 0.00 0.00 1.40
2927 3147 5.703592 TGGTCTTGCGTGAGTAACAAAATAT 59.296 36.000 0.00 0.00 0.00 1.28
2928 3148 6.021596 GGTCTTGCGTGAGTAACAAAATATG 58.978 40.000 0.00 0.00 0.00 1.78
2929 3149 5.508224 GTCTTGCGTGAGTAACAAAATATGC 59.492 40.000 0.00 0.00 0.00 3.14
2930 3150 5.180304 TCTTGCGTGAGTAACAAAATATGCA 59.820 36.000 0.00 0.00 0.00 3.96
2931 3151 5.559427 TGCGTGAGTAACAAAATATGCAT 57.441 34.783 3.79 3.79 0.00 3.96
2932 3152 5.568482 TGCGTGAGTAACAAAATATGCATC 58.432 37.500 0.19 0.00 0.00 3.91
2933 3153 5.353956 TGCGTGAGTAACAAAATATGCATCT 59.646 36.000 0.19 0.00 0.00 2.90
2934 3154 6.536941 TGCGTGAGTAACAAAATATGCATCTA 59.463 34.615 0.19 0.00 0.00 1.98
2935 3155 6.846283 GCGTGAGTAACAAAATATGCATCTAC 59.154 38.462 0.19 0.00 0.00 2.59
2936 3156 7.254455 GCGTGAGTAACAAAATATGCATCTACT 60.254 37.037 0.19 0.25 0.00 2.57
2937 3157 9.244799 CGTGAGTAACAAAATATGCATCTACTA 57.755 33.333 0.19 0.00 0.00 1.82
2952 3172 8.982091 TGCATCTACTAACTCATAGTCTAACT 57.018 34.615 0.00 0.00 43.87 2.24
3048 3272 0.179048 CACATCCGGCCTCTGCATAA 60.179 55.000 0.00 0.00 40.13 1.90
3103 3329 5.277825 CACACAAAACACACCGACAAATAT 58.722 37.500 0.00 0.00 0.00 1.28
3107 3333 4.921470 AAACACACCGACAAATATCGAG 57.079 40.909 0.00 0.00 45.13 4.04
3216 3444 3.386402 TGACCATATCTGCACCGACAATA 59.614 43.478 0.00 0.00 0.00 1.90
3374 3602 4.114058 CATTCCGAACAATGCCTTCAAT 57.886 40.909 0.00 0.00 0.00 2.57
3375 3603 3.574284 TTCCGAACAATGCCTTCAATG 57.426 42.857 0.00 0.00 0.00 2.82
3506 3734 2.162208 GTCATTCATGTGTTGTCGCCAT 59.838 45.455 0.00 0.00 0.00 4.40
3512 3740 1.225855 TGTGTTGTCGCCATCACTTC 58.774 50.000 8.88 0.00 40.44 3.01
3515 3743 0.716108 GTTGTCGCCATCACTTCTCG 59.284 55.000 0.00 0.00 0.00 4.04
3700 3932 2.503061 CCGCTGTCCCAGATCCAG 59.497 66.667 0.00 0.00 32.44 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
149 176 1.402896 ATCATGACCATCGGCGAGGT 61.403 55.000 24.33 24.33 41.83 3.85
220 278 2.746277 AATGGAGGACGTTGCCGC 60.746 61.111 0.00 0.00 37.70 6.53
243 301 1.006571 GCAACTGGAGGACGACGAA 60.007 57.895 0.00 0.00 0.00 3.85
329 398 1.849039 CTCCATGGATTTCTCCCCTGT 59.151 52.381 16.63 0.00 41.29 4.00
338 407 2.885554 GCACAACTCCCTCCATGGATTT 60.886 50.000 16.63 0.95 38.35 2.17
348 417 1.674057 CCTCTTCGCACAACTCCCT 59.326 57.895 0.00 0.00 0.00 4.20
355 428 0.820226 CTCTGATCCCTCTTCGCACA 59.180 55.000 0.00 0.00 0.00 4.57
384 464 2.269883 GCCCCGACCATAACCGTT 59.730 61.111 0.00 0.00 0.00 4.44
402 482 7.211573 CACCCGTCATTACTATATAAACCACA 58.788 38.462 0.00 0.00 0.00 4.17
416 496 1.622607 CCCTCTGCCACCCGTCATTA 61.623 60.000 0.00 0.00 0.00 1.90
453 533 1.668151 GTTGCCGAGGCGTCTTCTT 60.668 57.895 9.78 0.00 45.51 2.52
456 536 3.936203 TGGTTGCCGAGGCGTCTT 61.936 61.111 9.78 0.00 45.51 3.01
605 687 1.295423 GGAGGCAACCGCTTACTCA 59.705 57.895 0.00 0.00 38.60 3.41
606 688 1.810030 CGGAGGCAACCGCTTACTC 60.810 63.158 9.86 0.00 46.20 2.59
617 699 2.599281 TCGGTCAGAACGGAGGCA 60.599 61.111 8.31 0.00 31.74 4.75
651 733 6.892658 AGTCAGCGATACTCTAGATCATTT 57.107 37.500 0.00 0.00 0.00 2.32
652 734 8.574251 AATAGTCAGCGATACTCTAGATCATT 57.426 34.615 0.00 0.00 0.00 2.57
653 735 8.574251 AAATAGTCAGCGATACTCTAGATCAT 57.426 34.615 0.00 0.00 0.00 2.45
654 736 7.148557 CGAAATAGTCAGCGATACTCTAGATCA 60.149 40.741 0.00 0.00 0.00 2.92
655 737 7.177407 CGAAATAGTCAGCGATACTCTAGATC 58.823 42.308 0.00 0.00 0.00 2.75
656 738 6.092944 CCGAAATAGTCAGCGATACTCTAGAT 59.907 42.308 0.00 0.00 0.00 1.98
657 739 5.408909 CCGAAATAGTCAGCGATACTCTAGA 59.591 44.000 0.00 0.00 0.00 2.43
658 740 5.408909 TCCGAAATAGTCAGCGATACTCTAG 59.591 44.000 0.00 0.00 0.00 2.43
659 741 5.178996 GTCCGAAATAGTCAGCGATACTCTA 59.821 44.000 0.00 0.00 0.00 2.43
660 742 4.023878 GTCCGAAATAGTCAGCGATACTCT 60.024 45.833 0.00 0.00 0.00 3.24
661 743 4.220572 GTCCGAAATAGTCAGCGATACTC 58.779 47.826 0.00 0.00 0.00 2.59
662 744 3.303857 CGTCCGAAATAGTCAGCGATACT 60.304 47.826 0.00 0.00 0.00 2.12
663 745 2.971915 CGTCCGAAATAGTCAGCGATAC 59.028 50.000 0.00 0.00 0.00 2.24
664 746 2.874086 TCGTCCGAAATAGTCAGCGATA 59.126 45.455 0.00 0.00 0.00 2.92
665 747 1.674441 TCGTCCGAAATAGTCAGCGAT 59.326 47.619 0.00 0.00 0.00 4.58
666 748 1.089112 TCGTCCGAAATAGTCAGCGA 58.911 50.000 0.00 0.00 0.00 4.93
667 749 1.904144 TTCGTCCGAAATAGTCAGCG 58.096 50.000 0.00 0.00 0.00 5.18
668 750 3.483738 GCTTTTCGTCCGAAATAGTCAGC 60.484 47.826 14.80 15.28 42.71 4.26
669 751 3.678072 TGCTTTTCGTCCGAAATAGTCAG 59.322 43.478 14.80 10.17 42.71 3.51
670 752 3.655486 TGCTTTTCGTCCGAAATAGTCA 58.345 40.909 14.80 12.87 42.71 3.41
671 753 4.328983 TCATGCTTTTCGTCCGAAATAGTC 59.671 41.667 14.80 11.16 42.71 2.59
672 754 4.250464 TCATGCTTTTCGTCCGAAATAGT 58.750 39.130 14.80 1.08 42.71 2.12
673 755 4.330074 ACTCATGCTTTTCGTCCGAAATAG 59.670 41.667 14.80 14.56 42.71 1.73
674 756 4.092821 CACTCATGCTTTTCGTCCGAAATA 59.907 41.667 14.80 6.30 42.71 1.40
675 757 3.074412 ACTCATGCTTTTCGTCCGAAAT 58.926 40.909 14.80 0.00 42.71 2.17
676 758 2.223144 CACTCATGCTTTTCGTCCGAAA 59.777 45.455 10.55 10.55 41.69 3.46
677 759 1.798223 CACTCATGCTTTTCGTCCGAA 59.202 47.619 0.00 0.00 0.00 4.30
678 760 1.428448 CACTCATGCTTTTCGTCCGA 58.572 50.000 0.00 0.00 0.00 4.55
679 761 3.955429 CACTCATGCTTTTCGTCCG 57.045 52.632 0.00 0.00 0.00 4.79
690 772 2.005451 CCTTCTTTCCTCGCACTCATG 58.995 52.381 0.00 0.00 0.00 3.07
691 773 1.065854 CCCTTCTTTCCTCGCACTCAT 60.066 52.381 0.00 0.00 0.00 2.90
692 774 0.321671 CCCTTCTTTCCTCGCACTCA 59.678 55.000 0.00 0.00 0.00 3.41
693 775 0.391793 CCCCTTCTTTCCTCGCACTC 60.392 60.000 0.00 0.00 0.00 3.51
694 776 1.128188 ACCCCTTCTTTCCTCGCACT 61.128 55.000 0.00 0.00 0.00 4.40
695 777 0.250770 AACCCCTTCTTTCCTCGCAC 60.251 55.000 0.00 0.00 0.00 5.34
696 778 0.476771 AAACCCCTTCTTTCCTCGCA 59.523 50.000 0.00 0.00 0.00 5.10
697 779 1.269723 CAAAACCCCTTCTTTCCTCGC 59.730 52.381 0.00 0.00 0.00 5.03
698 780 1.886542 CCAAAACCCCTTCTTTCCTCG 59.113 52.381 0.00 0.00 0.00 4.63
699 781 2.628178 CACCAAAACCCCTTCTTTCCTC 59.372 50.000 0.00 0.00 0.00 3.71
700 782 2.677914 CACCAAAACCCCTTCTTTCCT 58.322 47.619 0.00 0.00 0.00 3.36
701 783 1.691976 CCACCAAAACCCCTTCTTTCC 59.308 52.381 0.00 0.00 0.00 3.13
702 784 1.691976 CCCACCAAAACCCCTTCTTTC 59.308 52.381 0.00 0.00 0.00 2.62
703 785 1.801242 CCCACCAAAACCCCTTCTTT 58.199 50.000 0.00 0.00 0.00 2.52
704 786 0.762842 GCCCACCAAAACCCCTTCTT 60.763 55.000 0.00 0.00 0.00 2.52
705 787 1.152333 GCCCACCAAAACCCCTTCT 60.152 57.895 0.00 0.00 0.00 2.85
706 788 0.113580 TAGCCCACCAAAACCCCTTC 59.886 55.000 0.00 0.00 0.00 3.46
707 789 0.114364 CTAGCCCACCAAAACCCCTT 59.886 55.000 0.00 0.00 0.00 3.95
708 790 1.774300 CTAGCCCACCAAAACCCCT 59.226 57.895 0.00 0.00 0.00 4.79
709 791 1.304962 CCTAGCCCACCAAAACCCC 60.305 63.158 0.00 0.00 0.00 4.95
710 792 1.304962 CCCTAGCCCACCAAAACCC 60.305 63.158 0.00 0.00 0.00 4.11
711 793 0.323451 CTCCCTAGCCCACCAAAACC 60.323 60.000 0.00 0.00 0.00 3.27
712 794 0.696501 TCTCCCTAGCCCACCAAAAC 59.303 55.000 0.00 0.00 0.00 2.43
713 795 1.284785 CATCTCCCTAGCCCACCAAAA 59.715 52.381 0.00 0.00 0.00 2.44
714 796 0.918983 CATCTCCCTAGCCCACCAAA 59.081 55.000 0.00 0.00 0.00 3.28
715 797 0.044092 TCATCTCCCTAGCCCACCAA 59.956 55.000 0.00 0.00 0.00 3.67
716 798 0.399091 CTCATCTCCCTAGCCCACCA 60.399 60.000 0.00 0.00 0.00 4.17
717 799 0.105453 TCTCATCTCCCTAGCCCACC 60.105 60.000 0.00 0.00 0.00 4.61
718 800 1.691434 CTTCTCATCTCCCTAGCCCAC 59.309 57.143 0.00 0.00 0.00 4.61
719 801 2.036929 GCTTCTCATCTCCCTAGCCCA 61.037 57.143 0.00 0.00 0.00 5.36
720 802 0.684535 GCTTCTCATCTCCCTAGCCC 59.315 60.000 0.00 0.00 0.00 5.19
721 803 1.418334 TGCTTCTCATCTCCCTAGCC 58.582 55.000 0.00 0.00 0.00 3.93
722 804 2.871236 GCATGCTTCTCATCTCCCTAGC 60.871 54.545 11.37 0.00 31.79 3.42
723 805 2.367894 TGCATGCTTCTCATCTCCCTAG 59.632 50.000 20.33 0.00 31.79 3.02
724 806 2.401568 TGCATGCTTCTCATCTCCCTA 58.598 47.619 20.33 0.00 31.79 3.53
725 807 1.210538 TGCATGCTTCTCATCTCCCT 58.789 50.000 20.33 0.00 31.79 4.20
726 808 1.880675 CATGCATGCTTCTCATCTCCC 59.119 52.381 20.33 0.00 31.79 4.30
727 809 2.290916 CACATGCATGCTTCTCATCTCC 59.709 50.000 26.53 0.00 31.79 3.71
728 810 3.203716 TCACATGCATGCTTCTCATCTC 58.796 45.455 26.53 0.00 31.79 2.75
729 811 3.206964 CTCACATGCATGCTTCTCATCT 58.793 45.455 26.53 0.28 31.79 2.90
730 812 2.943690 ACTCACATGCATGCTTCTCATC 59.056 45.455 26.53 0.00 31.79 2.92
731 813 2.683362 CACTCACATGCATGCTTCTCAT 59.317 45.455 26.53 1.90 35.31 2.90
732 814 2.081462 CACTCACATGCATGCTTCTCA 58.919 47.619 26.53 0.00 0.00 3.27
733 815 2.353323 TCACTCACATGCATGCTTCTC 58.647 47.619 26.53 0.00 0.00 2.87
734 816 2.484742 TCACTCACATGCATGCTTCT 57.515 45.000 26.53 3.94 0.00 2.85
735 817 2.033049 GGATCACTCACATGCATGCTTC 59.967 50.000 26.53 11.89 0.00 3.86
736 818 2.022195 GGATCACTCACATGCATGCTT 58.978 47.619 26.53 10.16 0.00 3.91
737 819 1.064979 TGGATCACTCACATGCATGCT 60.065 47.619 26.53 11.04 0.00 3.79
738 820 1.333931 CTGGATCACTCACATGCATGC 59.666 52.381 26.53 11.82 0.00 4.06
739 821 2.872858 CTCTGGATCACTCACATGCATG 59.127 50.000 25.09 25.09 0.00 4.06
740 822 2.504585 ACTCTGGATCACTCACATGCAT 59.495 45.455 0.00 0.00 0.00 3.96
741 823 1.904537 ACTCTGGATCACTCACATGCA 59.095 47.619 0.00 0.00 0.00 3.96
742 824 2.548875 GACTCTGGATCACTCACATGC 58.451 52.381 0.00 0.00 0.00 4.06
743 825 2.765135 AGGACTCTGGATCACTCACATG 59.235 50.000 0.00 0.00 0.00 3.21
744 826 3.113191 AGGACTCTGGATCACTCACAT 57.887 47.619 0.00 0.00 0.00 3.21
745 827 2.612285 AGGACTCTGGATCACTCACA 57.388 50.000 0.00 0.00 0.00 3.58
746 828 3.357203 TGTAGGACTCTGGATCACTCAC 58.643 50.000 0.00 0.00 0.00 3.51
747 829 3.739401 TGTAGGACTCTGGATCACTCA 57.261 47.619 0.00 0.00 0.00 3.41
748 830 4.464597 ACTTTGTAGGACTCTGGATCACTC 59.535 45.833 0.00 0.00 0.00 3.51
749 831 4.421131 ACTTTGTAGGACTCTGGATCACT 58.579 43.478 0.00 0.00 0.00 3.41
750 832 4.464597 AGACTTTGTAGGACTCTGGATCAC 59.535 45.833 0.00 0.00 0.00 3.06
751 833 4.678256 AGACTTTGTAGGACTCTGGATCA 58.322 43.478 0.00 0.00 0.00 2.92
752 834 4.953579 AGAGACTTTGTAGGACTCTGGATC 59.046 45.833 0.00 0.00 37.64 3.36
753 835 4.709397 CAGAGACTTTGTAGGACTCTGGAT 59.291 45.833 0.00 0.00 44.17 3.41
754 836 4.082845 CAGAGACTTTGTAGGACTCTGGA 58.917 47.826 0.00 0.00 44.17 3.86
755 837 3.367910 GCAGAGACTTTGTAGGACTCTGG 60.368 52.174 19.24 6.25 45.80 3.86
756 838 3.256879 TGCAGAGACTTTGTAGGACTCTG 59.743 47.826 15.26 15.26 46.92 3.35
757 839 3.501349 TGCAGAGACTTTGTAGGACTCT 58.499 45.455 0.00 0.00 38.69 3.24
758 840 3.944055 TGCAGAGACTTTGTAGGACTC 57.056 47.619 0.00 0.00 32.74 3.36
759 841 4.899352 AATGCAGAGACTTTGTAGGACT 57.101 40.909 0.00 0.00 0.00 3.85
760 842 7.044798 AGATAAATGCAGAGACTTTGTAGGAC 58.955 38.462 0.00 0.00 0.00 3.85
761 843 7.124901 AGAGATAAATGCAGAGACTTTGTAGGA 59.875 37.037 0.00 0.00 0.00 2.94
762 844 7.224362 CAGAGATAAATGCAGAGACTTTGTAGG 59.776 40.741 0.00 0.00 0.00 3.18
763 845 7.978414 TCAGAGATAAATGCAGAGACTTTGTAG 59.022 37.037 0.00 0.00 0.00 2.74
764 846 7.840931 TCAGAGATAAATGCAGAGACTTTGTA 58.159 34.615 0.00 0.00 0.00 2.41
765 847 6.705302 TCAGAGATAAATGCAGAGACTTTGT 58.295 36.000 0.00 0.00 0.00 2.83
766 848 7.789273 ATCAGAGATAAATGCAGAGACTTTG 57.211 36.000 0.00 0.00 0.00 2.77
767 849 8.675504 CAAATCAGAGATAAATGCAGAGACTTT 58.324 33.333 0.00 0.00 0.00 2.66
768 850 7.828223 ACAAATCAGAGATAAATGCAGAGACTT 59.172 33.333 0.00 0.00 0.00 3.01
769 851 7.280428 CACAAATCAGAGATAAATGCAGAGACT 59.720 37.037 0.00 0.00 0.00 3.24
770 852 7.279536 TCACAAATCAGAGATAAATGCAGAGAC 59.720 37.037 0.00 0.00 0.00 3.36
771 853 7.333323 TCACAAATCAGAGATAAATGCAGAGA 58.667 34.615 0.00 0.00 0.00 3.10
772 854 7.494952 TCTCACAAATCAGAGATAAATGCAGAG 59.505 37.037 0.00 0.00 36.05 3.35
773 855 7.333323 TCTCACAAATCAGAGATAAATGCAGA 58.667 34.615 0.00 0.00 36.05 4.26
774 856 7.494952 TCTCTCACAAATCAGAGATAAATGCAG 59.505 37.037 0.00 0.00 40.24 4.41
775 857 7.333323 TCTCTCACAAATCAGAGATAAATGCA 58.667 34.615 0.00 0.00 40.24 3.96
776 858 7.783090 TCTCTCACAAATCAGAGATAAATGC 57.217 36.000 0.00 0.00 40.24 3.56
782 864 9.902684 ATGTATTTTCTCTCACAAATCAGAGAT 57.097 29.630 0.00 0.00 43.74 2.75
783 865 9.376075 GATGTATTTTCTCTCACAAATCAGAGA 57.624 33.333 0.00 0.00 42.83 3.10
784 866 8.610896 GGATGTATTTTCTCTCACAAATCAGAG 58.389 37.037 0.00 0.00 38.01 3.35
785 867 7.278646 CGGATGTATTTTCTCTCACAAATCAGA 59.721 37.037 0.00 0.00 0.00 3.27
786 868 7.278646 TCGGATGTATTTTCTCTCACAAATCAG 59.721 37.037 0.00 0.00 0.00 2.90
787 869 7.102993 TCGGATGTATTTTCTCTCACAAATCA 58.897 34.615 0.00 0.00 0.00 2.57
788 870 7.539712 TCGGATGTATTTTCTCTCACAAATC 57.460 36.000 0.00 0.00 0.00 2.17
789 871 7.921786 TTCGGATGTATTTTCTCTCACAAAT 57.078 32.000 0.00 0.00 0.00 2.32
790 872 7.921786 ATTCGGATGTATTTTCTCTCACAAA 57.078 32.000 0.00 0.00 0.00 2.83
791 873 7.921786 AATTCGGATGTATTTTCTCTCACAA 57.078 32.000 0.00 0.00 0.00 3.33
792 874 7.222031 CGTAATTCGGATGTATTTTCTCTCACA 59.778 37.037 0.00 0.00 35.71 3.58
793 875 7.556433 CGTAATTCGGATGTATTTTCTCTCAC 58.444 38.462 0.00 0.00 35.71 3.51
794 876 6.200286 GCGTAATTCGGATGTATTTTCTCTCA 59.800 38.462 0.00 0.00 40.26 3.27
795 877 6.346678 GGCGTAATTCGGATGTATTTTCTCTC 60.347 42.308 0.00 0.00 40.26 3.20
796 878 5.465724 GGCGTAATTCGGATGTATTTTCTCT 59.534 40.000 0.00 0.00 40.26 3.10
797 879 5.235616 TGGCGTAATTCGGATGTATTTTCTC 59.764 40.000 0.00 0.00 40.26 2.87
798 880 5.007332 GTGGCGTAATTCGGATGTATTTTCT 59.993 40.000 0.00 0.00 40.26 2.52
799 881 5.202640 GTGGCGTAATTCGGATGTATTTTC 58.797 41.667 0.00 0.00 40.26 2.29
800 882 4.260456 CGTGGCGTAATTCGGATGTATTTT 60.260 41.667 0.00 0.00 40.26 1.82
801 883 3.246699 CGTGGCGTAATTCGGATGTATTT 59.753 43.478 0.00 0.00 40.26 1.40
802 884 2.798283 CGTGGCGTAATTCGGATGTATT 59.202 45.455 0.00 0.00 40.26 1.89
803 885 2.223876 ACGTGGCGTAATTCGGATGTAT 60.224 45.455 0.00 0.00 38.73 2.29
804 886 1.134753 ACGTGGCGTAATTCGGATGTA 59.865 47.619 0.00 0.00 38.73 2.29
805 887 0.108520 ACGTGGCGTAATTCGGATGT 60.109 50.000 0.00 0.00 38.73 3.06
806 888 1.842720 TACGTGGCGTAATTCGGATG 58.157 50.000 0.00 0.00 39.44 3.51
807 889 2.669364 GATACGTGGCGTAATTCGGAT 58.331 47.619 0.00 0.00 45.39 4.18
808 890 1.597690 CGATACGTGGCGTAATTCGGA 60.598 52.381 13.46 0.00 45.39 4.55
809 891 0.774098 CGATACGTGGCGTAATTCGG 59.226 55.000 13.46 1.03 45.39 4.30
810 892 1.745566 TCGATACGTGGCGTAATTCG 58.254 50.000 14.52 14.52 45.39 3.34
811 893 4.221342 TGTATCGATACGTGGCGTAATTC 58.779 43.478 26.12 3.01 45.39 2.17
812 894 4.023792 TCTGTATCGATACGTGGCGTAATT 60.024 41.667 26.12 0.00 45.39 1.40
813 895 3.499537 TCTGTATCGATACGTGGCGTAAT 59.500 43.478 26.12 0.00 45.39 1.89
814 896 2.871633 TCTGTATCGATACGTGGCGTAA 59.128 45.455 26.12 8.96 45.39 3.18
815 897 2.482864 TCTGTATCGATACGTGGCGTA 58.517 47.619 26.12 9.60 46.28 4.42
816 898 1.302366 TCTGTATCGATACGTGGCGT 58.698 50.000 26.12 0.00 44.35 5.68
817 899 2.394545 TTCTGTATCGATACGTGGCG 57.605 50.000 26.12 14.02 36.06 5.69
828 910 3.365220 GCTATCCAACGCGATTCTGTATC 59.635 47.826 15.93 0.00 0.00 2.24
829 911 3.005897 AGCTATCCAACGCGATTCTGTAT 59.994 43.478 15.93 0.00 0.00 2.29
830 912 2.361119 AGCTATCCAACGCGATTCTGTA 59.639 45.455 15.93 0.00 0.00 2.74
831 913 1.137086 AGCTATCCAACGCGATTCTGT 59.863 47.619 15.93 0.00 0.00 3.41
832 914 1.858091 AGCTATCCAACGCGATTCTG 58.142 50.000 15.93 4.05 0.00 3.02
833 915 2.474816 GAAGCTATCCAACGCGATTCT 58.525 47.619 15.93 0.00 0.00 2.40
834 916 2.932167 GAAGCTATCCAACGCGATTC 57.068 50.000 15.93 0.00 0.00 2.52
854 936 3.812019 AGTCTACGGACCGCAGCG 61.812 66.667 15.39 8.18 43.05 5.18
855 937 2.202623 CAGTCTACGGACCGCAGC 60.203 66.667 15.39 7.11 43.05 5.25
856 938 1.994507 CTCCAGTCTACGGACCGCAG 61.995 65.000 15.39 11.42 43.05 5.18
857 939 2.034532 TCCAGTCTACGGACCGCA 59.965 61.111 15.39 0.00 43.05 5.69
858 940 1.102222 ATCTCCAGTCTACGGACCGC 61.102 60.000 15.39 0.00 43.05 5.68
859 941 0.945813 GATCTCCAGTCTACGGACCG 59.054 60.000 13.61 13.61 43.05 4.79
860 942 1.320507 GGATCTCCAGTCTACGGACC 58.679 60.000 0.00 0.00 43.05 4.46
861 943 0.945813 CGGATCTCCAGTCTACGGAC 59.054 60.000 0.00 0.00 42.41 4.79
862 944 0.818445 GCGGATCTCCAGTCTACGGA 60.818 60.000 0.00 0.00 35.14 4.69
863 945 1.101635 TGCGGATCTCCAGTCTACGG 61.102 60.000 0.00 0.00 35.14 4.02
864 946 0.309302 CTGCGGATCTCCAGTCTACG 59.691 60.000 0.00 0.00 35.14 3.51
865 947 1.681538 TCTGCGGATCTCCAGTCTAC 58.318 55.000 11.22 0.00 35.14 2.59
866 948 2.666272 ATCTGCGGATCTCCAGTCTA 57.334 50.000 0.90 0.00 35.14 2.59
867 949 1.686052 GAATCTGCGGATCTCCAGTCT 59.314 52.381 8.88 0.00 35.14 3.24
868 950 1.410517 TGAATCTGCGGATCTCCAGTC 59.589 52.381 8.88 1.98 35.14 3.51
869 951 1.489481 TGAATCTGCGGATCTCCAGT 58.511 50.000 8.88 0.00 35.14 4.00
870 952 2.609427 TTGAATCTGCGGATCTCCAG 57.391 50.000 8.88 6.77 35.14 3.86
871 953 2.910199 CTTTGAATCTGCGGATCTCCA 58.090 47.619 8.88 4.89 35.14 3.86
872 954 1.601430 GCTTTGAATCTGCGGATCTCC 59.399 52.381 8.88 2.19 0.00 3.71
873 955 1.260033 CGCTTTGAATCTGCGGATCTC 59.740 52.381 8.88 9.27 45.07 2.75
874 956 1.293924 CGCTTTGAATCTGCGGATCT 58.706 50.000 8.88 0.00 45.07 2.75
875 957 3.814049 CGCTTTGAATCTGCGGATC 57.186 52.632 8.88 3.38 45.07 3.36
880 962 2.094258 TGAACGATCGCTTTGAATCTGC 59.906 45.455 16.60 0.00 0.00 4.26
881 963 3.997319 TGAACGATCGCTTTGAATCTG 57.003 42.857 16.60 0.00 0.00 2.90
882 964 4.670221 GCTTTGAACGATCGCTTTGAATCT 60.670 41.667 16.60 0.00 0.00 2.40
883 965 3.539954 GCTTTGAACGATCGCTTTGAATC 59.460 43.478 16.60 3.22 0.00 2.52
884 966 3.492313 GCTTTGAACGATCGCTTTGAAT 58.508 40.909 16.60 0.00 0.00 2.57
885 967 2.350388 GGCTTTGAACGATCGCTTTGAA 60.350 45.455 16.60 0.12 0.00 2.69
886 968 1.196808 GGCTTTGAACGATCGCTTTGA 59.803 47.619 16.60 0.00 0.00 2.69
887 969 1.069296 TGGCTTTGAACGATCGCTTTG 60.069 47.619 16.60 2.08 0.00 2.77
888 970 1.234821 TGGCTTTGAACGATCGCTTT 58.765 45.000 16.60 2.22 0.00 3.51
929 1011 4.081420 GCTCAAGTAAGACAAGATGAGGGA 60.081 45.833 0.00 0.00 35.87 4.20
944 1026 2.047274 GCTGCCGGTGCTCAAGTA 60.047 61.111 1.90 0.00 38.71 2.24
957 1039 2.976903 GAGGCGGATGATGGCTGC 60.977 66.667 0.00 0.00 42.99 5.25
962 1044 2.038952 TCTTAATGGGAGGCGGATGATG 59.961 50.000 0.00 0.00 0.00 3.07
969 1051 1.209504 TGGAGTTCTTAATGGGAGGCG 59.790 52.381 0.00 0.00 0.00 5.52
973 1055 2.500098 CGGTCTGGAGTTCTTAATGGGA 59.500 50.000 0.00 0.00 0.00 4.37
975 1057 3.056107 TGACGGTCTGGAGTTCTTAATGG 60.056 47.826 9.88 0.00 0.00 3.16
1008 1092 1.199615 GGGACTTGGGAGGAGAAGAG 58.800 60.000 0.00 0.00 0.00 2.85
1018 1102 0.611896 GTGATGGGTTGGGACTTGGG 60.612 60.000 0.00 0.00 0.00 4.12
1019 1103 0.405585 AGTGATGGGTTGGGACTTGG 59.594 55.000 0.00 0.00 0.00 3.61
1020 1104 3.282021 CATAGTGATGGGTTGGGACTTG 58.718 50.000 0.00 0.00 0.00 3.16
1021 1105 3.652057 CATAGTGATGGGTTGGGACTT 57.348 47.619 0.00 0.00 0.00 3.01
1038 1122 3.168528 GGCGGAAGAGGCCCCATA 61.169 66.667 0.00 0.00 44.97 2.74
1066 1157 2.429250 GGAGAGGTAGGAGAAAGAGTGC 59.571 54.545 0.00 0.00 0.00 4.40
1105 1196 2.973180 GATCGTCCCTTGCTACCGCC 62.973 65.000 0.00 0.00 34.43 6.13
1120 1211 0.803768 CTTGCTCCCTGTGTCGATCG 60.804 60.000 9.36 9.36 0.00 3.69
1155 1246 2.668550 ACGGGAAGCTGTTTCGGC 60.669 61.111 0.00 0.00 36.62 5.54
1347 1438 1.001181 CACTTGCCTGGTGAATTTGGG 59.999 52.381 0.00 0.00 36.89 4.12
1385 1476 6.988622 TGTAGAGCTAGAGAAGTACAGAAC 57.011 41.667 0.00 0.00 0.00 3.01
1396 1487 4.203226 TGTGAGTGGATGTAGAGCTAGAG 58.797 47.826 0.00 0.00 0.00 2.43
1409 1500 4.437682 AAATTGAGGACTTGTGAGTGGA 57.562 40.909 0.00 0.00 35.88 4.02
1445 1650 6.005583 TCCAAGTACGTTCATATCCGATAC 57.994 41.667 0.00 0.00 0.00 2.24
1447 1652 5.010719 ACATCCAAGTACGTTCATATCCGAT 59.989 40.000 0.00 0.00 0.00 4.18
1448 1653 4.340097 ACATCCAAGTACGTTCATATCCGA 59.660 41.667 0.00 0.00 0.00 4.55
1449 1654 4.617959 ACATCCAAGTACGTTCATATCCG 58.382 43.478 0.00 0.00 0.00 4.18
1450 1655 5.277345 GCAACATCCAAGTACGTTCATATCC 60.277 44.000 0.00 0.00 0.00 2.59
1451 1656 5.523916 AGCAACATCCAAGTACGTTCATATC 59.476 40.000 0.00 0.00 0.00 1.63
1469 1674 0.673333 CCTGCGTGGTGATAGCAACA 60.673 55.000 0.00 0.00 40.01 3.33
1470 1675 2.089854 CCTGCGTGGTGATAGCAAC 58.910 57.895 0.00 0.00 40.63 4.17
1471 1676 4.615901 CCTGCGTGGTGATAGCAA 57.384 55.556 0.00 0.00 40.63 3.91
1492 1700 2.977772 AGTTGTAGCTCAGCATCCTC 57.022 50.000 0.00 0.00 0.00 3.71
1561 1769 1.153667 CTCCAGCACGAGGAGCTTC 60.154 63.158 0.00 0.00 45.51 3.86
1573 1781 4.756458 ACGCTCAGCAGCTCCAGC 62.756 66.667 11.64 11.64 44.40 4.85
1627 1835 2.526873 ACAAGGCGGTCCACCTCT 60.527 61.111 0.00 0.00 36.14 3.69
1633 1841 2.579738 GAGGAGACAAGGCGGTCC 59.420 66.667 8.43 0.00 38.59 4.46
1678 1886 3.691744 CTGCTCGCTGAGGTCGACC 62.692 68.421 27.67 27.67 32.08 4.79
1694 1902 2.946597 CGAGAGCGCGTACAGCTG 60.947 66.667 13.48 13.48 46.13 4.24
1819 2027 2.708386 AGAAGTCCTCGAACGTGAAG 57.292 50.000 0.00 0.00 0.00 3.02
1939 2147 1.416813 GCTCGAGGTGCTTGTCGATG 61.417 60.000 15.58 2.80 43.86 3.84
1999 2207 2.743752 CCACATCTTCACCAGCGCG 61.744 63.158 0.00 0.00 0.00 6.86
2077 2285 1.562575 ATTGTGGTCGAACGAACCGC 61.563 55.000 9.71 13.70 34.83 5.68
2078 2286 0.437295 GATTGTGGTCGAACGAACCG 59.563 55.000 9.71 0.00 0.00 4.44
2128 2347 5.729974 ACATGATGAATTCTGTGACATCG 57.270 39.130 7.05 4.03 41.04 3.84
2183 2403 1.008875 TCACAGCGCAAGTGTCGATC 61.009 55.000 25.56 0.00 38.16 3.69
2195 2415 1.869574 CCAGATCGTCGTCACAGCG 60.870 63.158 0.00 0.00 0.00 5.18
2201 2421 1.932604 GCCATGATCCAGATCGTCGTC 60.933 57.143 0.00 0.00 40.63 4.20
2204 2424 0.668706 CCGCCATGATCCAGATCGTC 60.669 60.000 0.00 0.00 40.63 4.20
2283 2503 3.000727 CGTACACTCTGGATTTGTTCCC 58.999 50.000 0.00 0.00 44.77 3.97
2294 2514 2.243407 GCGTCTTCTTCGTACACTCTG 58.757 52.381 0.00 0.00 0.00 3.35
2301 2521 1.601419 CCCTGGGCGTCTTCTTCGTA 61.601 60.000 0.00 0.00 0.00 3.43
2318 2538 1.276622 TCTTGAGGTACTTGAGGCCC 58.723 55.000 0.00 0.00 41.55 5.80
2376 2596 1.413445 CTCTCTTGGGATCAGCAGAGG 59.587 57.143 12.10 3.08 34.61 3.69
2387 2607 0.907486 TCTGCATGGTCTCTCTTGGG 59.093 55.000 0.00 0.00 0.00 4.12
2456 2676 2.751436 CCCATGGCCCAGACGTTG 60.751 66.667 6.09 0.00 0.00 4.10
2462 2682 2.367377 TCTCTCCCCATGGCCCAG 60.367 66.667 6.09 1.03 0.00 4.45
2486 2706 1.674057 CTCCGGCCTGTCCCATATC 59.326 63.158 0.00 0.00 0.00 1.63
2525 2745 3.989698 ATCAACCTGCGCGTCCTCG 62.990 63.158 8.43 0.00 40.37 4.63
2537 2757 1.607801 GCAGCCCCCTGAAATCAACC 61.608 60.000 0.00 0.00 41.77 3.77
2645 2865 2.416547 CCAGTCGAAGCAATACAACAGG 59.583 50.000 0.00 0.00 0.00 4.00
2654 2874 0.320771 GAAGCTCCCAGTCGAAGCAA 60.321 55.000 8.64 0.00 38.51 3.91
2681 2901 1.154263 GACGTCGTCCTCCTTCACG 60.154 63.158 14.60 0.00 37.36 4.35
2682 2902 1.154263 CGACGTCGTCCTCCTTCAC 60.154 63.158 29.08 0.00 34.11 3.18
2697 2917 2.807108 GCCCTGTTTCCTCCATATCGAC 60.807 54.545 0.00 0.00 0.00 4.20
2730 2950 3.336122 CAAGAGCCACCTTCTTGCT 57.664 52.632 2.46 0.00 43.38 3.91
2756 2976 2.311124 ATCACTACCGCTTAACTGGC 57.689 50.000 0.00 0.00 0.00 4.85
2811 3031 8.790718 GGCATTTGAAACATATGAGATATCACT 58.209 33.333 10.38 0.00 0.00 3.41
2812 3032 8.570488 TGGCATTTGAAACATATGAGATATCAC 58.430 33.333 10.38 0.00 0.00 3.06
2813 3033 8.570488 GTGGCATTTGAAACATATGAGATATCA 58.430 33.333 10.38 0.00 0.00 2.15
2814 3034 8.025445 GGTGGCATTTGAAACATATGAGATATC 58.975 37.037 10.38 0.00 0.00 1.63
2815 3035 7.727186 AGGTGGCATTTGAAACATATGAGATAT 59.273 33.333 10.38 0.00 0.00 1.63
2816 3036 7.062322 AGGTGGCATTTGAAACATATGAGATA 58.938 34.615 10.38 0.00 0.00 1.98
2817 3037 5.895534 AGGTGGCATTTGAAACATATGAGAT 59.104 36.000 10.38 0.00 0.00 2.75
2818 3038 5.263599 AGGTGGCATTTGAAACATATGAGA 58.736 37.500 10.38 0.00 0.00 3.27
2819 3039 5.587388 AGGTGGCATTTGAAACATATGAG 57.413 39.130 10.38 0.00 0.00 2.90
2820 3040 6.095300 CACTAGGTGGCATTTGAAACATATGA 59.905 38.462 10.38 0.00 0.00 2.15
2821 3041 6.267817 CACTAGGTGGCATTTGAAACATATG 58.732 40.000 0.00 0.00 0.00 1.78
2822 3042 5.163519 GCACTAGGTGGCATTTGAAACATAT 60.164 40.000 0.00 0.00 33.64 1.78
2823 3043 4.157656 GCACTAGGTGGCATTTGAAACATA 59.842 41.667 0.00 0.00 33.64 2.29
2824 3044 3.056607 GCACTAGGTGGCATTTGAAACAT 60.057 43.478 0.00 0.00 33.64 2.71
2825 3045 2.295909 GCACTAGGTGGCATTTGAAACA 59.704 45.455 0.00 0.00 33.64 2.83
2826 3046 2.558359 AGCACTAGGTGGCATTTGAAAC 59.442 45.455 0.00 0.00 33.64 2.78
2827 3047 2.875296 AGCACTAGGTGGCATTTGAAA 58.125 42.857 0.00 0.00 33.64 2.69
2828 3048 2.584835 AGCACTAGGTGGCATTTGAA 57.415 45.000 0.00 0.00 33.64 2.69
2829 3049 2.436417 GAAGCACTAGGTGGCATTTGA 58.564 47.619 0.00 0.00 33.64 2.69
2830 3050 1.474077 GGAAGCACTAGGTGGCATTTG 59.526 52.381 0.00 0.00 33.64 2.32
2831 3051 1.355720 AGGAAGCACTAGGTGGCATTT 59.644 47.619 0.00 0.00 33.64 2.32
2832 3052 0.995024 AGGAAGCACTAGGTGGCATT 59.005 50.000 0.00 0.00 33.64 3.56
2833 3053 0.543749 GAGGAAGCACTAGGTGGCAT 59.456 55.000 0.00 0.00 33.64 4.40
2834 3054 0.835971 TGAGGAAGCACTAGGTGGCA 60.836 55.000 0.00 0.00 33.64 4.92
2835 3055 0.324943 TTGAGGAAGCACTAGGTGGC 59.675 55.000 0.00 0.00 33.64 5.01
2836 3056 4.487714 TTATTGAGGAAGCACTAGGTGG 57.512 45.455 0.00 0.00 33.64 4.61
2837 3057 5.491982 AGTTTATTGAGGAAGCACTAGGTG 58.508 41.667 0.00 0.00 36.51 4.00
2838 3058 5.763876 AGTTTATTGAGGAAGCACTAGGT 57.236 39.130 0.00 0.00 0.00 3.08
2839 3059 7.606456 TGTTTAGTTTATTGAGGAAGCACTAGG 59.394 37.037 0.00 0.00 0.00 3.02
2840 3060 8.547967 TGTTTAGTTTATTGAGGAAGCACTAG 57.452 34.615 0.00 0.00 0.00 2.57
2841 3061 8.154856 ACTGTTTAGTTTATTGAGGAAGCACTA 58.845 33.333 0.00 0.00 31.66 2.74
2842 3062 6.998673 ACTGTTTAGTTTATTGAGGAAGCACT 59.001 34.615 0.00 0.00 31.66 4.40
2843 3063 7.203255 ACTGTTTAGTTTATTGAGGAAGCAC 57.797 36.000 0.00 0.00 31.66 4.40
2844 3064 8.154856 ACTACTGTTTAGTTTATTGAGGAAGCA 58.845 33.333 0.00 0.00 38.36 3.91
2845 3065 8.549338 ACTACTGTTTAGTTTATTGAGGAAGC 57.451 34.615 0.00 0.00 38.36 3.86
2874 3094 9.753674 TGGAAGGTTGTTCTTATATTTGAGATT 57.246 29.630 0.00 0.00 0.00 2.40
2875 3095 9.401058 CTGGAAGGTTGTTCTTATATTTGAGAT 57.599 33.333 0.00 0.00 0.00 2.75
2876 3096 8.383175 ACTGGAAGGTTGTTCTTATATTTGAGA 58.617 33.333 0.00 0.00 39.30 3.27
2877 3097 8.567285 ACTGGAAGGTTGTTCTTATATTTGAG 57.433 34.615 0.00 0.00 39.30 3.02
2878 3098 8.792633 CAACTGGAAGGTTGTTCTTATATTTGA 58.207 33.333 0.00 0.00 40.92 2.69
2879 3099 8.028938 CCAACTGGAAGGTTGTTCTTATATTTG 58.971 37.037 6.60 0.00 43.36 2.32
2880 3100 7.728532 ACCAACTGGAAGGTTGTTCTTATATTT 59.271 33.333 1.86 0.00 43.36 1.40
2881 3101 7.238710 ACCAACTGGAAGGTTGTTCTTATATT 58.761 34.615 1.86 0.00 43.36 1.28
2882 3102 6.790319 ACCAACTGGAAGGTTGTTCTTATAT 58.210 36.000 1.86 0.00 43.36 0.86
2883 3103 6.043938 AGACCAACTGGAAGGTTGTTCTTATA 59.956 38.462 1.86 0.00 43.14 0.98
2884 3104 5.061721 ACCAACTGGAAGGTTGTTCTTAT 57.938 39.130 1.86 0.00 43.36 1.73
2885 3105 4.165372 AGACCAACTGGAAGGTTGTTCTTA 59.835 41.667 1.86 0.00 43.14 2.10
2886 3106 3.053619 AGACCAACTGGAAGGTTGTTCTT 60.054 43.478 1.86 0.00 43.14 2.52
2887 3107 2.509964 AGACCAACTGGAAGGTTGTTCT 59.490 45.455 1.86 2.44 41.71 3.01
2888 3108 2.932261 AGACCAACTGGAAGGTTGTTC 58.068 47.619 1.86 0.00 43.36 3.18
2889 3109 3.023832 CAAGACCAACTGGAAGGTTGTT 58.976 45.455 1.86 0.00 43.36 2.83
2890 3110 2.654863 CAAGACCAACTGGAAGGTTGT 58.345 47.619 1.86 0.00 43.36 3.32
2891 3111 1.338020 GCAAGACCAACTGGAAGGTTG 59.662 52.381 1.86 0.00 44.17 3.77
2892 3112 1.692411 GCAAGACCAACTGGAAGGTT 58.308 50.000 1.86 0.00 38.50 3.50
2893 3113 0.535102 CGCAAGACCAACTGGAAGGT 60.535 55.000 1.86 0.00 41.83 3.50
2894 3114 0.535102 ACGCAAGACCAACTGGAAGG 60.535 55.000 1.86 0.00 39.08 3.46
2895 3115 0.588252 CACGCAAGACCAACTGGAAG 59.412 55.000 1.86 0.00 43.62 3.46
2896 3116 0.179234 TCACGCAAGACCAACTGGAA 59.821 50.000 1.86 0.00 43.62 3.53
2897 3117 0.249868 CTCACGCAAGACCAACTGGA 60.250 55.000 1.86 0.00 43.62 3.86
2898 3118 0.532862 ACTCACGCAAGACCAACTGG 60.533 55.000 0.00 0.00 43.62 4.00
2899 3119 2.148916 TACTCACGCAAGACCAACTG 57.851 50.000 0.00 0.00 43.62 3.16
2900 3120 2.159014 TGTTACTCACGCAAGACCAACT 60.159 45.455 0.00 0.00 43.62 3.16
2901 3121 2.206750 TGTTACTCACGCAAGACCAAC 58.793 47.619 0.00 0.00 43.62 3.77
2902 3122 2.605837 TGTTACTCACGCAAGACCAA 57.394 45.000 0.00 0.00 43.62 3.67
2903 3123 2.605837 TTGTTACTCACGCAAGACCA 57.394 45.000 0.00 0.00 43.62 4.02
2904 3124 3.955771 TTTTGTTACTCACGCAAGACC 57.044 42.857 0.00 0.00 43.62 3.85
2905 3125 5.508224 GCATATTTTGTTACTCACGCAAGAC 59.492 40.000 0.00 0.00 43.62 3.01
2906 3126 5.180304 TGCATATTTTGTTACTCACGCAAGA 59.820 36.000 0.00 0.00 43.62 3.02
2908 3128 5.363979 TGCATATTTTGTTACTCACGCAA 57.636 34.783 0.00 0.00 0.00 4.85
2909 3129 5.353956 AGATGCATATTTTGTTACTCACGCA 59.646 36.000 0.00 0.00 0.00 5.24
2910 3130 5.810525 AGATGCATATTTTGTTACTCACGC 58.189 37.500 0.00 0.00 0.00 5.34
2911 3131 8.131455 AGTAGATGCATATTTTGTTACTCACG 57.869 34.615 0.00 0.00 0.00 4.35
2926 3146 9.581289 AGTTAGACTATGAGTTAGTAGATGCAT 57.419 33.333 0.00 0.00 41.35 3.96
2927 3147 8.982091 AGTTAGACTATGAGTTAGTAGATGCA 57.018 34.615 0.00 0.00 41.35 3.96
2953 3173 8.903820 CCATCCTTTATCGGAAAACTAATTCTT 58.096 33.333 0.00 0.00 36.49 2.52
2954 3174 8.272173 TCCATCCTTTATCGGAAAACTAATTCT 58.728 33.333 0.00 0.00 36.49 2.40
2955 3175 8.446599 TCCATCCTTTATCGGAAAACTAATTC 57.553 34.615 0.00 0.00 36.49 2.17
2956 3176 8.996651 ATCCATCCTTTATCGGAAAACTAATT 57.003 30.769 0.00 0.00 36.49 1.40
2957 3177 8.996651 AATCCATCCTTTATCGGAAAACTAAT 57.003 30.769 0.00 0.00 36.49 1.73
2958 3178 8.817092 AAATCCATCCTTTATCGGAAAACTAA 57.183 30.769 0.00 0.00 36.49 2.24
2959 3179 8.817092 AAAATCCATCCTTTATCGGAAAACTA 57.183 30.769 0.00 0.00 36.49 2.24
2960 3180 7.718334 AAAATCCATCCTTTATCGGAAAACT 57.282 32.000 0.00 0.00 36.49 2.66
3048 3272 3.315191 GTGTTGGTTGTGTGCATCTTAGT 59.685 43.478 0.00 0.00 0.00 2.24
3216 3444 1.447838 GTCCGCGTGGTGTCATGAT 60.448 57.895 16.01 0.00 36.30 2.45
3240 3468 0.380378 GGCGTTGCTGTTGAAGAACA 59.620 50.000 0.00 0.00 39.88 3.18
3506 3734 1.095600 CTGGGATCGTCGAGAAGTGA 58.904 55.000 0.00 0.00 0.00 3.41
3512 3740 1.532007 GTAGCTACTGGGATCGTCGAG 59.468 57.143 16.88 0.00 0.00 4.04
3515 3743 1.609555 CCTGTAGCTACTGGGATCGTC 59.390 57.143 31.98 3.20 40.41 4.20
3636 3864 7.627300 GCCTCCATCAAAAGTTTATGAGAGTTC 60.627 40.741 0.72 0.00 0.00 3.01
3700 3932 3.829601 CCTAGGACTATGTCATGGGAGAC 59.170 52.174 1.05 0.00 45.43 3.36
3735 3967 0.038166 CTACAACCCATGGTGCTGGT 59.962 55.000 11.73 4.13 35.34 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.