Multiple sequence alignment - TraesCS7A01G373100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G373100 chr7A 100.000 3601 0 0 557 4157 546264329 546260729 0.000000e+00 6650.0
1 TraesCS7A01G373100 chr7A 100.000 154 0 0 1 154 546264885 546264732 6.800000e-73 285.0
2 TraesCS7A01G373100 chr7D 86.911 3377 235 110 663 3968 450247487 450244247 0.000000e+00 3596.0
3 TraesCS7A01G373100 chr7B 86.409 3311 225 122 687 3924 468408062 468404904 0.000000e+00 3413.0
4 TraesCS7A01G373100 chr6A 83.887 602 73 18 1421 2005 196870705 196870111 1.690000e-153 553.0
5 TraesCS7A01G373100 chr6A 89.744 234 24 0 1076 1309 196871384 196871151 2.430000e-77 300.0
6 TraesCS7A01G373100 chr6D 83.361 601 76 17 1421 2005 149303915 149304507 6.120000e-148 534.0
7 TraesCS7A01G373100 chr6D 89.516 248 26 0 1059 1306 149303221 149303468 8.680000e-82 315.0
8 TraesCS7A01G373100 chr6D 78.641 412 70 14 2123 2525 149304505 149304907 1.480000e-64 257.0
9 TraesCS7A01G373100 chr6B 82.805 599 82 19 1421 2005 262274358 262274949 2.220000e-142 516.0
10 TraesCS7A01G373100 chr6B 86.170 282 32 7 1027 1306 262273636 262273912 8.740000e-77 298.0
11 TraesCS7A01G373100 chr6B 77.725 422 68 18 2123 2525 262274947 262275361 6.950000e-58 235.0
12 TraesCS7A01G373100 chr3B 85.472 413 54 4 2699 3108 136800920 136800511 3.840000e-115 425.0
13 TraesCS7A01G373100 chr3B 83.761 234 35 2 1077 1307 136803444 136803211 7.000000e-53 219.0
14 TraesCS7A01G373100 chr3B 81.579 190 33 2 2341 2529 136801221 136801033 5.560000e-34 156.0
15 TraesCS7A01G373100 chr3B 90.141 71 7 0 4042 4112 765923819 765923749 4.420000e-15 93.5
16 TraesCS7A01G373100 chr3B 88.732 71 8 0 4042 4112 335132330 335132260 2.060000e-13 87.9
17 TraesCS7A01G373100 chr3A 85.158 411 59 2 2699 3108 103618901 103618492 1.790000e-113 420.0
18 TraesCS7A01G373100 chr3A 83.761 234 35 2 1077 1307 103621794 103621561 7.000000e-53 219.0
19 TraesCS7A01G373100 chr3A 81.579 190 33 2 2341 2529 103619202 103619014 5.560000e-34 156.0
20 TraesCS7A01G373100 chr3D 84.988 413 56 4 2699 3108 86936535 86936126 8.310000e-112 414.0
21 TraesCS7A01G373100 chr3D 83.761 234 35 2 1077 1307 86939060 86938827 7.000000e-53 219.0
22 TraesCS7A01G373100 chr3D 81.579 190 33 2 2341 2529 86936836 86936648 5.560000e-34 156.0
23 TraesCS7A01G373100 chr2D 78.972 428 78 11 2688 3112 83933151 83932733 8.800000e-72 281.0
24 TraesCS7A01G373100 chr2A 78.738 428 79 11 2688 3112 84942039 84941621 4.090000e-70 276.0
25 TraesCS7A01G373100 chr2B 78.505 428 80 11 2688 3112 136155710 136155292 1.900000e-68 270.0
26 TraesCS7A01G373100 chr1D 100.000 28 0 0 4019 4046 237769530 237769503 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G373100 chr7A 546260729 546264885 4156 True 3467.500000 6650 100.000000 1 4157 2 chr7A.!!$R1 4156
1 TraesCS7A01G373100 chr7D 450244247 450247487 3240 True 3596.000000 3596 86.911000 663 3968 1 chr7D.!!$R1 3305
2 TraesCS7A01G373100 chr7B 468404904 468408062 3158 True 3413.000000 3413 86.409000 687 3924 1 chr7B.!!$R1 3237
3 TraesCS7A01G373100 chr6A 196870111 196871384 1273 True 426.500000 553 86.815500 1076 2005 2 chr6A.!!$R1 929
4 TraesCS7A01G373100 chr6D 149303221 149304907 1686 False 368.666667 534 83.839333 1059 2525 3 chr6D.!!$F1 1466
5 TraesCS7A01G373100 chr6B 262273636 262275361 1725 False 349.666667 516 82.233333 1027 2525 3 chr6B.!!$F1 1498
6 TraesCS7A01G373100 chr3B 136800511 136803444 2933 True 266.666667 425 83.604000 1077 3108 3 chr3B.!!$R3 2031
7 TraesCS7A01G373100 chr3A 103618492 103621794 3302 True 265.000000 420 83.499333 1077 3108 3 chr3A.!!$R1 2031
8 TraesCS7A01G373100 chr3D 86936126 86939060 2934 True 263.000000 414 83.442667 1077 3108 3 chr3D.!!$R1 2031

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 768 0.040425 CGGACAAACCCAAAGCGAAG 60.040 55.0 0.00 0.00 34.64 3.79 F
1667 3223 0.246757 GTACGAGTGAAACGCATGCG 60.247 55.0 36.79 36.79 45.86 4.73 F
2575 4245 0.382515 CCGAAAGCACCACCGAAAAA 59.617 50.0 0.00 0.00 0.00 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2093 3709 0.109781 ATTGAATTGACGGCGCACAC 60.110 50.0 10.83 0.00 0.00 3.82 R
2630 4301 0.314979 GTTTTTGTTTTGCCGCTGCG 60.315 50.0 16.34 16.34 41.78 5.18 R
4052 5766 0.100682 CGGAGCGGAGAGATTTCGAA 59.899 55.0 0.00 0.00 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.581476 TGCACTTTTAACTAGATTGTAGTTGC 58.419 34.615 14.65 10.18 38.16 4.17
26 27 7.444183 TGCACTTTTAACTAGATTGTAGTTGCT 59.556 33.333 14.65 0.00 38.16 3.91
27 28 8.932791 GCACTTTTAACTAGATTGTAGTTGCTA 58.067 33.333 14.65 0.38 38.16 3.49
61 62 9.472361 AATCAATTGTGAAAAATCTCAGTCAAG 57.528 29.630 5.13 0.00 37.30 3.02
62 63 7.999679 TCAATTGTGAAAAATCTCAGTCAAGT 58.000 30.769 5.13 0.00 0.00 3.16
63 64 9.119418 TCAATTGTGAAAAATCTCAGTCAAGTA 57.881 29.630 5.13 0.00 0.00 2.24
64 65 9.173939 CAATTGTGAAAAATCTCAGTCAAGTAC 57.826 33.333 0.00 0.00 0.00 2.73
65 66 8.682936 ATTGTGAAAAATCTCAGTCAAGTACT 57.317 30.769 0.00 0.00 39.81 2.73
66 67 7.715265 TGTGAAAAATCTCAGTCAAGTACTC 57.285 36.000 0.00 0.00 35.76 2.59
67 68 6.706270 TGTGAAAAATCTCAGTCAAGTACTCC 59.294 38.462 0.00 0.00 35.76 3.85
68 69 6.706270 GTGAAAAATCTCAGTCAAGTACTCCA 59.294 38.462 0.00 0.00 35.76 3.86
69 70 7.226720 GTGAAAAATCTCAGTCAAGTACTCCAA 59.773 37.037 0.00 0.00 35.76 3.53
70 71 7.939039 TGAAAAATCTCAGTCAAGTACTCCAAT 59.061 33.333 0.00 0.00 35.76 3.16
71 72 8.697507 AAAAATCTCAGTCAAGTACTCCAATT 57.302 30.769 0.00 0.00 35.76 2.32
72 73 9.793259 AAAAATCTCAGTCAAGTACTCCAATTA 57.207 29.630 0.00 0.00 35.76 1.40
73 74 9.442047 AAAATCTCAGTCAAGTACTCCAATTAG 57.558 33.333 0.00 0.00 35.76 1.73
74 75 7.726033 ATCTCAGTCAAGTACTCCAATTAGT 57.274 36.000 0.00 0.00 35.76 2.24
75 76 8.824756 ATCTCAGTCAAGTACTCCAATTAGTA 57.175 34.615 0.00 0.00 35.76 1.82
76 77 8.645814 TCTCAGTCAAGTACTCCAATTAGTAA 57.354 34.615 0.00 0.00 35.76 2.24
77 78 9.256228 TCTCAGTCAAGTACTCCAATTAGTAAT 57.744 33.333 0.00 0.00 35.76 1.89
125 126 4.877378 AAACACAACCCTAGACGATACA 57.123 40.909 0.00 0.00 0.00 2.29
126 127 4.877378 AACACAACCCTAGACGATACAA 57.123 40.909 0.00 0.00 0.00 2.41
127 128 4.877378 ACACAACCCTAGACGATACAAA 57.123 40.909 0.00 0.00 0.00 2.83
128 129 5.217978 ACACAACCCTAGACGATACAAAA 57.782 39.130 0.00 0.00 0.00 2.44
129 130 5.613329 ACACAACCCTAGACGATACAAAAA 58.387 37.500 0.00 0.00 0.00 1.94
590 591 8.436046 CAAAAATCCTTTTGTCTCCAAATTCA 57.564 30.769 2.81 0.00 44.28 2.57
591 592 9.059260 CAAAAATCCTTTTGTCTCCAAATTCAT 57.941 29.630 2.81 0.00 44.28 2.57
592 593 8.837788 AAAATCCTTTTGTCTCCAAATTCATC 57.162 30.769 0.00 0.00 40.14 2.92
593 594 7.787623 AATCCTTTTGTCTCCAAATTCATCT 57.212 32.000 0.00 0.00 40.14 2.90
594 595 7.787623 ATCCTTTTGTCTCCAAATTCATCTT 57.212 32.000 0.00 0.00 40.14 2.40
595 596 7.601705 TCCTTTTGTCTCCAAATTCATCTTT 57.398 32.000 0.00 0.00 40.14 2.52
596 597 8.021898 TCCTTTTGTCTCCAAATTCATCTTTT 57.978 30.769 0.00 0.00 40.14 2.27
597 598 7.927629 TCCTTTTGTCTCCAAATTCATCTTTTG 59.072 33.333 0.00 0.00 40.14 2.44
604 605 3.866910 CCAAATTCATCTTTTGGCGATGG 59.133 43.478 2.53 0.00 44.69 3.51
605 606 4.497300 CAAATTCATCTTTTGGCGATGGT 58.503 39.130 0.00 0.00 38.95 3.55
606 607 4.376340 AATTCATCTTTTGGCGATGGTC 57.624 40.909 0.00 0.00 38.95 4.02
607 608 2.787473 TCATCTTTTGGCGATGGTCT 57.213 45.000 0.00 0.00 38.95 3.85
608 609 2.632377 TCATCTTTTGGCGATGGTCTC 58.368 47.619 0.00 0.00 38.95 3.36
609 610 2.237143 TCATCTTTTGGCGATGGTCTCT 59.763 45.455 0.00 0.00 38.95 3.10
610 611 2.859165 TCTTTTGGCGATGGTCTCTT 57.141 45.000 0.00 0.00 0.00 2.85
611 612 3.973206 TCTTTTGGCGATGGTCTCTTA 57.027 42.857 0.00 0.00 0.00 2.10
612 613 4.280436 TCTTTTGGCGATGGTCTCTTAA 57.720 40.909 0.00 0.00 0.00 1.85
613 614 4.843728 TCTTTTGGCGATGGTCTCTTAAT 58.156 39.130 0.00 0.00 0.00 1.40
614 615 5.253330 TCTTTTGGCGATGGTCTCTTAATT 58.747 37.500 0.00 0.00 0.00 1.40
615 616 5.710099 TCTTTTGGCGATGGTCTCTTAATTT 59.290 36.000 0.00 0.00 0.00 1.82
616 617 5.560966 TTTGGCGATGGTCTCTTAATTTC 57.439 39.130 0.00 0.00 0.00 2.17
617 618 4.214986 TGGCGATGGTCTCTTAATTTCA 57.785 40.909 0.00 0.00 0.00 2.69
618 619 4.584874 TGGCGATGGTCTCTTAATTTCAA 58.415 39.130 0.00 0.00 0.00 2.69
619 620 5.007034 TGGCGATGGTCTCTTAATTTCAAA 58.993 37.500 0.00 0.00 0.00 2.69
620 621 5.106317 TGGCGATGGTCTCTTAATTTCAAAC 60.106 40.000 0.00 0.00 0.00 2.93
621 622 5.332707 GCGATGGTCTCTTAATTTCAAACC 58.667 41.667 0.00 0.00 0.00 3.27
622 623 5.560148 CGATGGTCTCTTAATTTCAAACCG 58.440 41.667 0.00 0.00 0.00 4.44
623 624 5.447279 CGATGGTCTCTTAATTTCAAACCGG 60.447 44.000 0.00 0.00 0.00 5.28
624 625 4.975631 TGGTCTCTTAATTTCAAACCGGA 58.024 39.130 9.46 0.00 0.00 5.14
625 626 4.758165 TGGTCTCTTAATTTCAAACCGGAC 59.242 41.667 9.46 0.00 0.00 4.79
626 627 5.001874 GGTCTCTTAATTTCAAACCGGACT 58.998 41.667 9.46 0.00 0.00 3.85
627 628 5.472478 GGTCTCTTAATTTCAAACCGGACTT 59.528 40.000 9.46 0.00 0.00 3.01
628 629 6.371389 GTCTCTTAATTTCAAACCGGACTTG 58.629 40.000 9.46 11.77 0.00 3.16
629 630 6.204108 GTCTCTTAATTTCAAACCGGACTTGA 59.796 38.462 9.46 14.16 0.00 3.02
630 631 6.204108 TCTCTTAATTTCAAACCGGACTTGAC 59.796 38.462 19.05 0.00 32.61 3.18
631 632 5.823570 TCTTAATTTCAAACCGGACTTGACA 59.176 36.000 19.05 14.83 32.61 3.58
632 633 6.488683 TCTTAATTTCAAACCGGACTTGACAT 59.511 34.615 19.05 16.09 32.61 3.06
633 634 5.529581 AATTTCAAACCGGACTTGACATT 57.470 34.783 20.19 20.19 32.61 2.71
634 635 4.993029 TTTCAAACCGGACTTGACATTT 57.007 36.364 19.05 0.49 32.61 2.32
635 636 4.561735 TTCAAACCGGACTTGACATTTC 57.438 40.909 19.05 0.00 32.61 2.17
636 637 3.546724 TCAAACCGGACTTGACATTTCA 58.453 40.909 9.46 0.00 0.00 2.69
637 638 3.314080 TCAAACCGGACTTGACATTTCAC 59.686 43.478 9.46 0.00 0.00 3.18
638 639 1.892209 ACCGGACTTGACATTTCACC 58.108 50.000 9.46 0.00 0.00 4.02
639 640 1.420138 ACCGGACTTGACATTTCACCT 59.580 47.619 9.46 0.00 0.00 4.00
640 641 2.158667 ACCGGACTTGACATTTCACCTT 60.159 45.455 9.46 0.00 0.00 3.50
641 642 2.484264 CCGGACTTGACATTTCACCTTC 59.516 50.000 0.00 0.00 0.00 3.46
642 643 3.138304 CGGACTTGACATTTCACCTTCA 58.862 45.455 0.00 0.00 0.00 3.02
643 644 3.753272 CGGACTTGACATTTCACCTTCAT 59.247 43.478 0.00 0.00 0.00 2.57
644 645 4.935205 CGGACTTGACATTTCACCTTCATA 59.065 41.667 0.00 0.00 0.00 2.15
645 646 5.411361 CGGACTTGACATTTCACCTTCATAA 59.589 40.000 0.00 0.00 0.00 1.90
646 647 6.094048 CGGACTTGACATTTCACCTTCATAAT 59.906 38.462 0.00 0.00 0.00 1.28
647 648 7.362056 CGGACTTGACATTTCACCTTCATAATT 60.362 37.037 0.00 0.00 0.00 1.40
648 649 8.306761 GGACTTGACATTTCACCTTCATAATTT 58.693 33.333 0.00 0.00 0.00 1.82
649 650 9.346725 GACTTGACATTTCACCTTCATAATTTC 57.653 33.333 0.00 0.00 0.00 2.17
650 651 9.082313 ACTTGACATTTCACCTTCATAATTTCT 57.918 29.630 0.00 0.00 0.00 2.52
681 682 4.701956 ATAGAAAACTGGAAATGCCACG 57.298 40.909 0.00 0.00 43.33 4.94
686 687 1.237285 ACTGGAAATGCCACGTCAGC 61.237 55.000 0.04 0.04 43.33 4.26
687 688 1.228094 TGGAAATGCCACGTCAGCA 60.228 52.632 11.88 11.88 43.33 4.41
688 689 1.236616 TGGAAATGCCACGTCAGCAG 61.237 55.000 14.50 0.00 44.90 4.24
689 690 1.154150 GAAATGCCACGTCAGCAGC 60.154 57.895 14.50 4.36 44.90 5.25
694 704 4.007644 CCACGTCAGCAGCCCAGA 62.008 66.667 0.00 0.00 0.00 3.86
738 748 2.998670 GCTTAAACCTACCTCGTTGACC 59.001 50.000 0.00 0.00 0.00 4.02
755 765 2.642700 CCGGACAAACCCAAAGCG 59.357 61.111 0.00 0.00 34.64 4.68
756 766 1.894756 CCGGACAAACCCAAAGCGA 60.895 57.895 0.00 0.00 34.64 4.93
757 767 1.448922 CCGGACAAACCCAAAGCGAA 61.449 55.000 0.00 0.00 34.64 4.70
758 768 0.040425 CGGACAAACCCAAAGCGAAG 60.040 55.000 0.00 0.00 34.64 3.79
759 769 3.905227 CGGACAAACCCAAAGCGAAGC 62.905 57.143 0.00 0.00 46.39 3.86
789 799 1.079956 CAGAGCAGAACAGAGCGCT 60.080 57.895 11.27 11.27 41.63 5.92
833 848 0.459759 GCCGCTCCCCTATATAACGC 60.460 60.000 0.00 0.00 0.00 4.84
877 892 1.457455 CCTCCTCCTCCTGCTCCTC 60.457 68.421 0.00 0.00 0.00 3.71
894 909 4.260170 CTCCTCTCTCATTTCCAAACCAG 58.740 47.826 0.00 0.00 0.00 4.00
902 927 1.118838 TTTCCAAACCAGCCCAACAG 58.881 50.000 0.00 0.00 0.00 3.16
905 930 1.463553 CCAAACCAGCCCAACAGACC 61.464 60.000 0.00 0.00 0.00 3.85
906 931 1.152546 AAACCAGCCCAACAGACCC 60.153 57.895 0.00 0.00 0.00 4.46
907 932 1.943730 AAACCAGCCCAACAGACCCA 61.944 55.000 0.00 0.00 0.00 4.51
908 933 2.282462 CCAGCCCAACAGACCCAC 60.282 66.667 0.00 0.00 0.00 4.61
909 934 2.669569 CAGCCCAACAGACCCACG 60.670 66.667 0.00 0.00 0.00 4.94
910 935 2.847234 AGCCCAACAGACCCACGA 60.847 61.111 0.00 0.00 0.00 4.35
918 943 3.432588 AGACCCACGACTCGAGCG 61.433 66.667 21.95 21.95 0.00 5.03
928 953 4.778415 CTCGAGCGACCCACCGTG 62.778 72.222 0.00 0.00 0.00 4.94
966 997 1.823976 GAGGAATCGGACCCCTGTC 59.176 63.158 4.91 0.00 40.98 3.51
967 998 0.688087 GAGGAATCGGACCCCTGTCT 60.688 60.000 4.91 0.00 41.47 3.41
972 1007 3.760035 CGGACCCCTGTCTGTCGG 61.760 72.222 0.00 0.00 42.02 4.79
991 1026 2.743928 GGCGCCCTTCTGTGTCAG 60.744 66.667 18.11 0.00 0.00 3.51
1386 2920 1.074405 CCATCGATGGGTGGAATGGAT 59.926 52.381 32.99 0.00 44.31 3.41
1406 2951 4.530553 GGATTTTTAATGGTGGTTGGGTCT 59.469 41.667 0.00 0.00 0.00 3.85
1654 3210 1.324718 CGACAACCTCAACGTACGAG 58.675 55.000 24.41 14.00 0.00 4.18
1665 3221 1.057636 ACGTACGAGTGAAACGCATG 58.942 50.000 24.41 0.00 45.86 4.06
1667 3223 0.246757 GTACGAGTGAAACGCATGCG 60.247 55.000 36.79 36.79 45.86 4.73
1669 3225 2.555782 GAGTGAAACGCATGCGCA 59.444 55.556 38.15 25.49 45.86 6.09
1702 3262 2.029073 CGGCTTGGTCGTCAGTGT 59.971 61.111 0.00 0.00 0.00 3.55
1703 3263 2.310233 CGGCTTGGTCGTCAGTGTG 61.310 63.158 0.00 0.00 0.00 3.82
1704 3264 2.607892 GGCTTGGTCGTCAGTGTGC 61.608 63.158 0.00 0.00 0.00 4.57
1705 3265 1.887242 GCTTGGTCGTCAGTGTGCA 60.887 57.895 0.00 0.00 0.00 4.57
1763 3366 3.215245 TTTTTGCAGCGGCTGGTT 58.785 50.000 29.44 0.00 41.91 3.67
2054 3669 1.214062 CCAGTCACCGCTCAGAGAC 59.786 63.158 0.00 0.00 0.00 3.36
2063 3679 1.202394 CCGCTCAGAGACTCTCCATTG 60.202 57.143 0.69 0.00 0.00 2.82
2091 3707 3.515104 TCCATGCTTCTGTACTCATGTCA 59.485 43.478 0.00 0.00 35.72 3.58
2093 3709 4.272748 CCATGCTTCTGTACTCATGTCATG 59.727 45.833 6.47 6.47 35.72 3.07
2094 3710 4.541973 TGCTTCTGTACTCATGTCATGT 57.458 40.909 12.54 0.00 0.00 3.21
2096 3712 4.248859 GCTTCTGTACTCATGTCATGTGT 58.751 43.478 20.87 20.87 39.90 3.72
2098 3714 3.588955 TCTGTACTCATGTCATGTGTGC 58.411 45.455 24.21 23.02 39.00 4.57
2099 3715 2.336667 TGTACTCATGTCATGTGTGCG 58.663 47.619 24.21 8.36 40.60 5.34
2100 3716 1.061131 GTACTCATGTCATGTGTGCGC 59.939 52.381 24.21 0.00 37.53 6.09
2183 3799 4.095400 AGGGAGATCAGGCGGGGT 62.095 66.667 0.00 0.00 0.00 4.95
2257 3891 1.809567 GCCAAGGACAAGGGCAACAG 61.810 60.000 0.00 0.00 46.92 3.16
2258 3892 1.662044 CAAGGACAAGGGCAACAGC 59.338 57.895 0.00 0.00 39.74 4.40
2259 3893 1.898574 AAGGACAAGGGCAACAGCG 60.899 57.895 0.00 0.00 39.74 5.18
2556 4226 1.301479 ACTGTTCCGAGGCCGAAAC 60.301 57.895 0.00 1.17 38.22 2.78
2557 4227 2.031465 TGTTCCGAGGCCGAAACC 59.969 61.111 0.00 0.00 38.22 3.27
2558 4228 3.116531 GTTCCGAGGCCGAAACCG 61.117 66.667 0.00 0.00 38.22 4.44
2559 4229 3.304721 TTCCGAGGCCGAAACCGA 61.305 61.111 0.00 0.00 38.22 4.69
2560 4230 2.870119 TTCCGAGGCCGAAACCGAA 61.870 57.895 0.00 0.00 38.22 4.30
2562 4232 2.388232 CCGAGGCCGAAACCGAAAG 61.388 63.158 0.00 0.00 38.22 2.62
2564 4234 1.964373 GAGGCCGAAACCGAAAGCA 60.964 57.895 0.00 0.00 33.69 3.91
2565 4235 2.183858 GAGGCCGAAACCGAAAGCAC 62.184 60.000 0.00 0.00 33.69 4.40
2567 4237 2.548295 GCCGAAACCGAAAGCACCA 61.548 57.895 0.00 0.00 0.00 4.17
2568 4238 1.281656 CCGAAACCGAAAGCACCAC 59.718 57.895 0.00 0.00 0.00 4.16
2569 4239 1.281656 CGAAACCGAAAGCACCACC 59.718 57.895 0.00 0.00 0.00 4.61
2570 4240 1.281656 GAAACCGAAAGCACCACCG 59.718 57.895 0.00 0.00 0.00 4.94
2571 4241 1.153127 AAACCGAAAGCACCACCGA 60.153 52.632 0.00 0.00 0.00 4.69
2572 4242 0.748729 AAACCGAAAGCACCACCGAA 60.749 50.000 0.00 0.00 0.00 4.30
2575 4245 0.382515 CCGAAAGCACCACCGAAAAA 59.617 50.000 0.00 0.00 0.00 1.94
2578 4248 2.727777 GAAAGCACCACCGAAAAAGAC 58.272 47.619 0.00 0.00 0.00 3.01
2586 4256 3.250040 ACCACCGAAAAAGACGATCTTTG 59.750 43.478 11.88 4.73 45.19 2.77
2593 4263 5.113529 CGAAAAAGACGATCTTTGAAAACCG 59.886 40.000 11.88 0.00 45.19 4.44
2594 4264 5.494632 AAAAGACGATCTTTGAAAACCGT 57.505 34.783 11.88 0.00 45.19 4.83
2598 4268 1.127951 CGATCTTTGAAAACCGTCCGG 59.872 52.381 3.76 3.76 42.03 5.14
2599 4269 2.419667 GATCTTTGAAAACCGTCCGGA 58.580 47.619 13.54 0.00 38.96 5.14
2644 4315 4.921847 GCACGCAGCGGCAAAACA 62.922 61.111 21.15 0.00 41.24 2.83
2645 4316 2.278466 CACGCAGCGGCAAAACAA 60.278 55.556 21.15 0.00 41.24 2.83
2647 4318 1.153745 ACGCAGCGGCAAAACAAAA 60.154 47.368 21.15 0.00 41.24 2.44
2648 4319 0.737715 ACGCAGCGGCAAAACAAAAA 60.738 45.000 21.15 0.00 41.24 1.94
2649 4320 0.314979 CGCAGCGGCAAAACAAAAAC 60.315 50.000 7.00 0.00 41.24 2.43
2674 4345 5.836821 AAAAGACTCACCTTGTTTCTTCC 57.163 39.130 0.00 0.00 0.00 3.46
2688 4359 3.894547 CTTCCCCCGTGTCCCGTTG 62.895 68.421 0.00 0.00 33.66 4.10
2730 4401 3.701604 GACGCTGAGGCTGTACCCG 62.702 68.421 0.00 0.00 40.58 5.28
2839 4510 3.385749 ATGGCGATCCACCACGACC 62.386 63.158 4.29 0.00 46.92 4.79
2842 4513 4.508128 CGATCCACCACGACCCCG 62.508 72.222 0.00 0.00 42.50 5.73
3000 4671 2.435059 GAGGCCAAGCTCACCGTC 60.435 66.667 5.01 0.00 0.00 4.79
3025 4696 2.989253 TGCTCCAGCGGTTCGAGA 60.989 61.111 11.65 0.00 45.83 4.04
3111 4782 4.891727 CCCGTGATCTTCCGCCCG 62.892 72.222 0.00 0.00 0.00 6.13
3112 4783 4.143333 CCGTGATCTTCCGCCCGT 62.143 66.667 0.00 0.00 0.00 5.28
3156 4830 0.110599 CGTCGATCCACGCTAGCTAG 60.111 60.000 16.84 16.84 42.26 3.42
3157 4831 0.386226 GTCGATCCACGCTAGCTAGC 60.386 60.000 31.88 31.88 45.62 3.42
3158 4832 0.535328 TCGATCCACGCTAGCTAGCT 60.535 55.000 36.02 23.12 46.85 3.32
3159 4833 1.157585 CGATCCACGCTAGCTAGCTA 58.842 55.000 36.02 22.85 46.85 3.32
3160 4834 1.129624 CGATCCACGCTAGCTAGCTAG 59.870 57.143 37.09 37.09 46.85 3.42
3193 4867 2.755929 GGCCAACGAACTCTGCTAG 58.244 57.895 0.00 0.00 0.00 3.42
3194 4868 1.362406 GGCCAACGAACTCTGCTAGC 61.362 60.000 8.10 8.10 0.00 3.42
3195 4869 1.362406 GCCAACGAACTCTGCTAGCC 61.362 60.000 13.29 0.00 0.00 3.93
3196 4870 0.247736 CCAACGAACTCTGCTAGCCT 59.752 55.000 13.29 0.00 0.00 4.58
3198 4872 0.533032 AACGAACTCTGCTAGCCTCC 59.467 55.000 13.29 0.00 0.00 4.30
3199 4873 0.612174 ACGAACTCTGCTAGCCTCCA 60.612 55.000 13.29 0.00 0.00 3.86
3200 4874 0.102120 CGAACTCTGCTAGCCTCCAG 59.898 60.000 13.29 2.50 0.00 3.86
3204 4884 1.075674 TCTGCTAGCCTCCAGGGAG 60.076 63.158 13.29 8.41 41.63 4.30
3226 4906 6.126863 AGTAGGAATTGACAGAAATGACCA 57.873 37.500 0.00 0.00 0.00 4.02
3236 4916 2.240612 GAAATGACCACGCCGTGCTC 62.241 60.000 12.68 8.82 31.34 4.26
3237 4917 2.731691 AAATGACCACGCCGTGCTCT 62.732 55.000 12.68 0.00 31.34 4.09
3238 4918 3.649277 ATGACCACGCCGTGCTCTC 62.649 63.158 12.68 6.30 31.34 3.20
3239 4919 4.057428 GACCACGCCGTGCTCTCT 62.057 66.667 12.68 0.00 31.34 3.10
3240 4920 3.973267 GACCACGCCGTGCTCTCTC 62.973 68.421 12.68 0.00 31.34 3.20
3251 4931 3.487711 CCGTGCTCTCTCTGTGTACATAC 60.488 52.174 0.00 0.00 0.00 2.39
3252 4932 3.127030 CGTGCTCTCTCTGTGTACATACA 59.873 47.826 0.00 0.00 0.00 2.29
3253 4933 4.201960 CGTGCTCTCTCTGTGTACATACAT 60.202 45.833 0.00 0.00 38.63 2.29
3254 4934 5.007724 CGTGCTCTCTCTGTGTACATACATA 59.992 44.000 0.00 0.00 38.63 2.29
3255 4935 6.293680 CGTGCTCTCTCTGTGTACATACATAT 60.294 42.308 0.00 0.00 38.63 1.78
3256 4936 6.860539 GTGCTCTCTCTGTGTACATACATATG 59.139 42.308 0.00 0.00 38.63 1.78
3257 4937 5.861251 GCTCTCTCTGTGTACATACATATGC 59.139 44.000 1.58 0.00 38.63 3.14
3258 4938 6.332735 TCTCTCTGTGTACATACATATGCC 57.667 41.667 1.58 0.00 38.63 4.40
3272 4952 0.878523 TATGCCGCCTAATGACACGC 60.879 55.000 0.00 0.00 0.00 5.34
3273 4953 3.925238 GCCGCCTAATGACACGCG 61.925 66.667 3.53 3.53 44.08 6.01
3276 4956 2.817834 GCCTAATGACACGCGGCA 60.818 61.111 12.47 5.99 40.41 5.69
3296 4976 1.978712 GCTAACGGAAAGCTTCGCCC 61.979 60.000 0.00 0.61 37.01 6.13
3297 4977 1.693083 CTAACGGAAAGCTTCGCCCG 61.693 60.000 24.28 24.28 46.65 6.13
3342 5022 1.522569 GATGGCCCTCGCTAACTGT 59.477 57.895 0.00 0.00 34.44 3.55
3352 5032 4.751098 CCCTCGCTAACTGTCTAGTAGTAG 59.249 50.000 0.00 0.00 35.69 2.57
3355 5035 6.420604 CCTCGCTAACTGTCTAGTAGTAGTAC 59.579 46.154 4.51 0.00 35.69 2.73
3356 5036 5.974158 TCGCTAACTGTCTAGTAGTAGTACG 59.026 44.000 4.51 12.05 35.69 3.67
3357 5037 5.746245 CGCTAACTGTCTAGTAGTAGTACGT 59.254 44.000 4.51 0.00 35.69 3.57
3358 5038 6.913132 CGCTAACTGTCTAGTAGTAGTACGTA 59.087 42.308 4.51 0.00 35.69 3.57
3359 5039 7.112844 CGCTAACTGTCTAGTAGTAGTACGTAG 59.887 44.444 0.00 5.34 35.69 3.51
3360 5040 7.918562 GCTAACTGTCTAGTAGTAGTACGTAGT 59.081 40.741 8.23 8.23 39.96 2.73
3392 5072 1.142314 GAGCAGAGCAGAGCAGGAG 59.858 63.158 0.00 0.00 0.00 3.69
3412 5092 1.135402 GCTTTAGGGTTTGATGGCACG 60.135 52.381 0.00 0.00 0.00 5.34
3466 5146 0.168128 CGGTCGCTTCCATTTGTTCC 59.832 55.000 0.00 0.00 0.00 3.62
3474 5154 2.899303 TCCATTTGTTCCCTTCTCCC 57.101 50.000 0.00 0.00 0.00 4.30
3486 5166 0.103208 CTTCTCCCTCCACGGATTCG 59.897 60.000 0.00 0.00 43.02 3.34
3533 5216 5.238583 ACTCCTACATTACAGCTGTGTTTC 58.761 41.667 29.57 0.00 38.19 2.78
3549 5232 4.394920 TGTGTTTCATTCCGGCTATTCTTC 59.605 41.667 0.00 0.00 0.00 2.87
3551 5234 5.066505 GTGTTTCATTCCGGCTATTCTTCAT 59.933 40.000 0.00 0.00 0.00 2.57
3552 5235 5.296780 TGTTTCATTCCGGCTATTCTTCATC 59.703 40.000 0.00 0.00 0.00 2.92
3554 5237 5.296151 TCATTCCGGCTATTCTTCATCTT 57.704 39.130 0.00 0.00 0.00 2.40
3556 5239 6.826668 TCATTCCGGCTATTCTTCATCTTTA 58.173 36.000 0.00 0.00 0.00 1.85
3557 5240 6.931281 TCATTCCGGCTATTCTTCATCTTTAG 59.069 38.462 0.00 0.00 0.00 1.85
3559 5242 6.971726 TCCGGCTATTCTTCATCTTTAGTA 57.028 37.500 0.00 0.00 0.00 1.82
3560 5243 6.982852 TCCGGCTATTCTTCATCTTTAGTAG 58.017 40.000 0.00 0.00 0.00 2.57
3561 5244 6.776116 TCCGGCTATTCTTCATCTTTAGTAGA 59.224 38.462 0.00 0.00 37.28 2.59
3562 5245 7.040340 TCCGGCTATTCTTCATCTTTAGTAGAG 60.040 40.741 0.00 0.00 36.02 2.43
3563 5246 6.584563 CGGCTATTCTTCATCTTTAGTAGAGC 59.415 42.308 0.00 0.00 36.02 4.09
3564 5247 7.437748 GGCTATTCTTCATCTTTAGTAGAGCA 58.562 38.462 0.00 0.00 36.02 4.26
3565 5248 7.598493 GGCTATTCTTCATCTTTAGTAGAGCAG 59.402 40.741 0.00 0.00 36.02 4.24
3566 5249 7.598493 GCTATTCTTCATCTTTAGTAGAGCAGG 59.402 40.741 0.00 0.00 36.02 4.85
3567 5250 7.667575 ATTCTTCATCTTTAGTAGAGCAGGA 57.332 36.000 0.00 0.00 36.02 3.86
3568 5251 6.707440 TCTTCATCTTTAGTAGAGCAGGAG 57.293 41.667 0.00 0.00 36.02 3.69
3570 5253 6.320164 TCTTCATCTTTAGTAGAGCAGGAGAC 59.680 42.308 0.00 0.00 36.02 3.36
3571 5254 4.576873 TCATCTTTAGTAGAGCAGGAGACG 59.423 45.833 0.00 0.00 36.02 4.18
3572 5255 3.280295 TCTTTAGTAGAGCAGGAGACGG 58.720 50.000 0.00 0.00 0.00 4.79
3584 5271 3.201290 CAGGAGACGGAAAAGGATGATG 58.799 50.000 0.00 0.00 0.00 3.07
3659 5346 1.652329 CGTGGACGTACGCGGTATC 60.652 63.158 25.77 4.60 43.45 2.24
3662 5349 2.332869 GACGTACGCGGTATCCCC 59.667 66.667 16.72 0.00 43.45 4.81
3663 5350 2.124151 ACGTACGCGGTATCCCCT 60.124 61.111 16.72 0.00 43.45 4.79
3665 5352 1.895707 CGTACGCGGTATCCCCTCT 60.896 63.158 12.47 0.00 0.00 3.69
3666 5353 1.849976 CGTACGCGGTATCCCCTCTC 61.850 65.000 12.47 0.00 0.00 3.20
3668 5355 0.250640 TACGCGGTATCCCCTCTCTC 60.251 60.000 12.47 0.00 0.00 3.20
3670 5357 1.238625 CGCGGTATCCCCTCTCTCTC 61.239 65.000 0.00 0.00 0.00 3.20
3671 5358 0.111639 GCGGTATCCCCTCTCTCTCT 59.888 60.000 0.00 0.00 0.00 3.10
3672 5359 1.884928 GCGGTATCCCCTCTCTCTCTC 60.885 61.905 0.00 0.00 0.00 3.20
3693 5395 1.266989 CCTCTCCTTTTTCGGTTGTGC 59.733 52.381 0.00 0.00 0.00 4.57
3713 5415 1.605500 CGTGTTGACAATTCATGGCG 58.394 50.000 0.00 0.00 41.43 5.69
3724 5426 0.181114 TTCATGGCGGAATCTCTGGG 59.819 55.000 0.00 0.00 0.00 4.45
3728 5430 2.190578 GCGGAATCTCTGGGGGTG 59.809 66.667 0.00 0.00 0.00 4.61
3731 5433 1.609783 GGAATCTCTGGGGGTGGTG 59.390 63.158 0.00 0.00 0.00 4.17
3734 5436 1.500783 AATCTCTGGGGGTGGTGGTG 61.501 60.000 0.00 0.00 0.00 4.17
3735 5437 3.650950 CTCTGGGGGTGGTGGTGG 61.651 72.222 0.00 0.00 0.00 4.61
3736 5438 4.525028 TCTGGGGGTGGTGGTGGT 62.525 66.667 0.00 0.00 0.00 4.16
3738 5440 2.855014 TGGGGGTGGTGGTGGTAC 60.855 66.667 0.00 0.00 0.00 3.34
3739 5441 2.855014 GGGGGTGGTGGTGGTACA 60.855 66.667 0.00 0.00 0.00 2.90
3740 5442 2.235761 GGGGGTGGTGGTGGTACAT 61.236 63.158 0.00 0.00 44.52 2.29
3779 5489 3.200593 GGCTGTGCTGAGGATGCG 61.201 66.667 0.00 0.00 0.00 4.73
3786 5496 2.513204 CTGAGGATGCGGTGCAGG 60.513 66.667 0.00 0.00 43.65 4.85
3790 5500 3.499737 GGATGCGGTGCAGGTTCG 61.500 66.667 0.00 0.00 43.65 3.95
3791 5501 2.742372 GATGCGGTGCAGGTTCGT 60.742 61.111 0.00 0.00 43.65 3.85
3792 5502 2.281484 ATGCGGTGCAGGTTCGTT 60.281 55.556 0.00 0.00 43.65 3.85
3793 5503 1.004320 ATGCGGTGCAGGTTCGTTA 60.004 52.632 0.00 0.00 43.65 3.18
3794 5504 1.019278 ATGCGGTGCAGGTTCGTTAG 61.019 55.000 0.00 0.00 43.65 2.34
3795 5505 1.666872 GCGGTGCAGGTTCGTTAGT 60.667 57.895 0.00 0.00 0.00 2.24
3796 5506 1.226030 GCGGTGCAGGTTCGTTAGTT 61.226 55.000 0.00 0.00 0.00 2.24
3797 5507 1.936203 GCGGTGCAGGTTCGTTAGTTA 60.936 52.381 0.00 0.00 0.00 2.24
3798 5508 1.990563 CGGTGCAGGTTCGTTAGTTAG 59.009 52.381 0.00 0.00 0.00 2.34
3799 5509 2.352030 CGGTGCAGGTTCGTTAGTTAGA 60.352 50.000 0.00 0.00 0.00 2.10
3800 5510 3.251571 GGTGCAGGTTCGTTAGTTAGAG 58.748 50.000 0.00 0.00 0.00 2.43
3801 5511 3.305881 GGTGCAGGTTCGTTAGTTAGAGT 60.306 47.826 0.00 0.00 0.00 3.24
3802 5512 3.919197 GTGCAGGTTCGTTAGTTAGAGTC 59.081 47.826 0.00 0.00 0.00 3.36
3803 5513 3.825014 TGCAGGTTCGTTAGTTAGAGTCT 59.175 43.478 0.00 0.00 0.00 3.24
3804 5514 5.005740 TGCAGGTTCGTTAGTTAGAGTCTA 58.994 41.667 0.00 0.00 0.00 2.59
3835 5545 1.524393 CTGTGCTGCCAGTGTGTCA 60.524 57.895 0.00 0.00 0.00 3.58
3844 5554 1.300931 CAGTGTGTCACCCACTCCG 60.301 63.158 0.00 0.00 44.81 4.63
3867 5577 0.989602 TGTCCTCCTCCTCGTGTCTA 59.010 55.000 0.00 0.00 0.00 2.59
3871 5581 1.292061 CTCCTCCTCGTGTCTACTCG 58.708 60.000 0.00 0.00 0.00 4.18
3879 5589 2.998670 CTCGTGTCTACTCGTGGTCTTA 59.001 50.000 4.71 0.00 34.81 2.10
3882 5592 4.456911 TCGTGTCTACTCGTGGTCTTATTT 59.543 41.667 4.71 0.00 34.81 1.40
3885 5595 6.183359 CGTGTCTACTCGTGGTCTTATTTTTC 60.183 42.308 0.00 0.00 0.00 2.29
3905 5617 7.784633 TTTTCTTGGCATTAGGTTTTCTTTG 57.215 32.000 0.00 0.00 0.00 2.77
3909 5621 4.630111 TGGCATTAGGTTTTCTTTGCTTG 58.370 39.130 0.00 0.00 35.23 4.01
3911 5623 4.686091 GGCATTAGGTTTTCTTTGCTTGAC 59.314 41.667 0.00 0.00 35.23 3.18
3912 5624 5.288804 GCATTAGGTTTTCTTTGCTTGACA 58.711 37.500 0.00 0.00 33.37 3.58
3919 5631 6.073276 AGGTTTTCTTTGCTTGACACAAAAAC 60.073 34.615 0.00 0.00 36.63 2.43
3925 5637 7.128976 TCTTTGCTTGACACAAAAACAAAAAC 58.871 30.769 0.00 0.00 36.63 2.43
3926 5638 5.011451 TGCTTGACACAAAAACAAAAACG 57.989 34.783 0.00 0.00 0.00 3.60
3927 5639 4.084328 TGCTTGACACAAAAACAAAAACGG 60.084 37.500 0.00 0.00 0.00 4.44
3928 5640 4.390501 CTTGACACAAAAACAAAAACGGC 58.609 39.130 0.00 0.00 0.00 5.68
3929 5641 3.390135 TGACACAAAAACAAAAACGGCA 58.610 36.364 0.00 0.00 0.00 5.69
3930 5642 3.430218 TGACACAAAAACAAAAACGGCAG 59.570 39.130 0.00 0.00 0.00 4.85
3931 5643 3.394719 ACACAAAAACAAAAACGGCAGT 58.605 36.364 0.00 0.00 0.00 4.40
3941 5655 0.666374 AAACGGCAGTTTCTTTCCCG 59.334 50.000 9.29 0.00 46.73 5.14
3956 5670 4.641094 TCTTTCCCGAGTTGTTTGCTTTAA 59.359 37.500 0.00 0.00 0.00 1.52
3959 5673 2.030274 CCCGAGTTGTTTGCTTTAAGGG 60.030 50.000 0.00 0.00 0.00 3.95
3960 5674 2.607038 CCGAGTTGTTTGCTTTAAGGGC 60.607 50.000 0.00 0.00 0.00 5.19
3961 5675 2.034053 CGAGTTGTTTGCTTTAAGGGCA 59.966 45.455 0.00 1.81 37.97 5.36
3962 5676 3.642705 GAGTTGTTTGCTTTAAGGGCAG 58.357 45.455 5.57 0.00 40.90 4.85
3963 5677 2.135139 GTTGTTTGCTTTAAGGGCAGC 58.865 47.619 5.57 0.00 40.90 5.25
3964 5678 0.313672 TGTTTGCTTTAAGGGCAGCG 59.686 50.000 5.57 0.00 40.90 5.18
3979 5693 3.426568 GCGCCAGCTCTCAACCAC 61.427 66.667 0.00 0.00 41.01 4.16
3980 5694 2.031012 CGCCAGCTCTCAACCACA 59.969 61.111 0.00 0.00 0.00 4.17
3981 5695 1.376424 CGCCAGCTCTCAACCACAT 60.376 57.895 0.00 0.00 0.00 3.21
3982 5696 0.957395 CGCCAGCTCTCAACCACATT 60.957 55.000 0.00 0.00 0.00 2.71
3983 5697 1.251251 GCCAGCTCTCAACCACATTT 58.749 50.000 0.00 0.00 0.00 2.32
3984 5698 1.615392 GCCAGCTCTCAACCACATTTT 59.385 47.619 0.00 0.00 0.00 1.82
3985 5699 2.352127 GCCAGCTCTCAACCACATTTTC 60.352 50.000 0.00 0.00 0.00 2.29
3986 5700 3.152341 CCAGCTCTCAACCACATTTTCT 58.848 45.455 0.00 0.00 0.00 2.52
3987 5701 3.190118 CCAGCTCTCAACCACATTTTCTC 59.810 47.826 0.00 0.00 0.00 2.87
3988 5702 3.070018 AGCTCTCAACCACATTTTCTCG 58.930 45.455 0.00 0.00 0.00 4.04
3989 5703 2.160417 GCTCTCAACCACATTTTCTCGG 59.840 50.000 0.00 0.00 0.00 4.63
3990 5704 2.151202 TCTCAACCACATTTTCTCGGC 58.849 47.619 0.00 0.00 0.00 5.54
3991 5705 1.200020 CTCAACCACATTTTCTCGGCC 59.800 52.381 0.00 0.00 0.00 6.13
3992 5706 0.958091 CAACCACATTTTCTCGGCCA 59.042 50.000 2.24 0.00 0.00 5.36
3993 5707 1.068333 CAACCACATTTTCTCGGCCAG 60.068 52.381 2.24 0.00 0.00 4.85
3994 5708 0.400213 ACCACATTTTCTCGGCCAGA 59.600 50.000 2.24 1.64 0.00 3.86
3995 5709 0.804989 CCACATTTTCTCGGCCAGAC 59.195 55.000 2.24 0.00 0.00 3.51
3996 5710 1.522668 CACATTTTCTCGGCCAGACA 58.477 50.000 2.24 0.00 0.00 3.41
3997 5711 1.466167 CACATTTTCTCGGCCAGACAG 59.534 52.381 2.24 0.00 0.00 3.51
3998 5712 1.347707 ACATTTTCTCGGCCAGACAGA 59.652 47.619 2.24 0.00 0.00 3.41
3999 5713 2.005451 CATTTTCTCGGCCAGACAGAG 58.995 52.381 2.24 0.00 41.50 3.35
4000 5714 0.320771 TTTTCTCGGCCAGACAGAGC 60.321 55.000 2.24 0.00 40.11 4.09
4001 5715 1.471829 TTTCTCGGCCAGACAGAGCA 61.472 55.000 2.24 0.00 40.11 4.26
4002 5716 2.125753 CTCGGCCAGACAGAGCAC 60.126 66.667 2.24 0.00 33.71 4.40
4003 5717 3.655810 CTCGGCCAGACAGAGCACC 62.656 68.421 2.24 0.00 33.71 5.01
4004 5718 3.699894 CGGCCAGACAGAGCACCT 61.700 66.667 2.24 0.00 0.00 4.00
4005 5719 2.753029 GGCCAGACAGAGCACCTT 59.247 61.111 0.00 0.00 0.00 3.50
4006 5720 1.073897 GGCCAGACAGAGCACCTTT 59.926 57.895 0.00 0.00 0.00 3.11
4007 5721 0.324943 GGCCAGACAGAGCACCTTTA 59.675 55.000 0.00 0.00 0.00 1.85
4008 5722 1.065126 GGCCAGACAGAGCACCTTTAT 60.065 52.381 0.00 0.00 0.00 1.40
4009 5723 2.284190 GCCAGACAGAGCACCTTTATC 58.716 52.381 0.00 0.00 0.00 1.75
4010 5724 2.355108 GCCAGACAGAGCACCTTTATCA 60.355 50.000 0.00 0.00 0.00 2.15
4011 5725 3.869912 GCCAGACAGAGCACCTTTATCAA 60.870 47.826 0.00 0.00 0.00 2.57
4012 5726 3.937706 CCAGACAGAGCACCTTTATCAAG 59.062 47.826 0.00 0.00 0.00 3.02
4025 5739 6.884280 CCTTTATCAAGGGTCCATGTATTC 57.116 41.667 0.00 0.00 45.63 1.75
4026 5740 5.770162 CCTTTATCAAGGGTCCATGTATTCC 59.230 44.000 0.00 0.00 45.63 3.01
4027 5741 6.410853 CCTTTATCAAGGGTCCATGTATTCCT 60.411 42.308 0.00 0.00 45.63 3.36
4028 5742 6.590656 TTATCAAGGGTCCATGTATTCCTT 57.409 37.500 0.00 0.00 38.25 3.36
4029 5743 4.503714 TCAAGGGTCCATGTATTCCTTC 57.496 45.455 0.00 0.00 35.84 3.46
4030 5744 3.202151 TCAAGGGTCCATGTATTCCTTCC 59.798 47.826 0.00 0.00 35.84 3.46
4031 5745 1.768870 AGGGTCCATGTATTCCTTCCG 59.231 52.381 0.00 0.00 0.00 4.30
4032 5746 1.489230 GGGTCCATGTATTCCTTCCGT 59.511 52.381 0.00 0.00 0.00 4.69
4033 5747 2.092592 GGGTCCATGTATTCCTTCCGTT 60.093 50.000 0.00 0.00 0.00 4.44
4034 5748 3.617284 GGTCCATGTATTCCTTCCGTTT 58.383 45.455 0.00 0.00 0.00 3.60
4035 5749 3.626217 GGTCCATGTATTCCTTCCGTTTC 59.374 47.826 0.00 0.00 0.00 2.78
4036 5750 4.514401 GTCCATGTATTCCTTCCGTTTCT 58.486 43.478 0.00 0.00 0.00 2.52
4037 5751 5.395990 GGTCCATGTATTCCTTCCGTTTCTA 60.396 44.000 0.00 0.00 0.00 2.10
4038 5752 6.110707 GTCCATGTATTCCTTCCGTTTCTAA 58.889 40.000 0.00 0.00 0.00 2.10
4039 5753 6.596497 GTCCATGTATTCCTTCCGTTTCTAAA 59.404 38.462 0.00 0.00 0.00 1.85
4040 5754 7.282450 GTCCATGTATTCCTTCCGTTTCTAAAT 59.718 37.037 0.00 0.00 0.00 1.40
4041 5755 8.487848 TCCATGTATTCCTTCCGTTTCTAAATA 58.512 33.333 0.00 0.00 0.00 1.40
4042 5756 9.284968 CCATGTATTCCTTCCGTTTCTAAATAT 57.715 33.333 0.00 0.00 0.00 1.28
4048 5762 9.780186 ATTCCTTCCGTTTCTAAATATAAGAGG 57.220 33.333 0.00 0.00 0.00 3.69
4049 5763 7.215085 TCCTTCCGTTTCTAAATATAAGAGGC 58.785 38.462 0.00 0.00 0.00 4.70
4050 5764 6.427242 CCTTCCGTTTCTAAATATAAGAGGCC 59.573 42.308 0.00 0.00 0.00 5.19
4051 5765 5.535333 TCCGTTTCTAAATATAAGAGGCCG 58.465 41.667 0.00 0.00 0.00 6.13
4052 5766 5.069516 TCCGTTTCTAAATATAAGAGGCCGT 59.930 40.000 0.00 0.00 0.00 5.68
4053 5767 5.756833 CCGTTTCTAAATATAAGAGGCCGTT 59.243 40.000 0.00 0.00 0.00 4.44
4054 5768 6.073927 CCGTTTCTAAATATAAGAGGCCGTTC 60.074 42.308 0.00 0.00 0.00 3.95
4055 5769 6.345565 CGTTTCTAAATATAAGAGGCCGTTCG 60.346 42.308 0.00 0.00 0.00 3.95
4056 5770 6.395426 TTCTAAATATAAGAGGCCGTTCGA 57.605 37.500 0.00 0.00 0.00 3.71
4057 5771 6.395426 TCTAAATATAAGAGGCCGTTCGAA 57.605 37.500 0.00 0.00 0.00 3.71
4058 5772 6.808829 TCTAAATATAAGAGGCCGTTCGAAA 58.191 36.000 0.00 0.00 0.00 3.46
4059 5773 7.439381 TCTAAATATAAGAGGCCGTTCGAAAT 58.561 34.615 0.00 0.00 0.00 2.17
4060 5774 6.541111 AAATATAAGAGGCCGTTCGAAATC 57.459 37.500 0.00 0.00 0.00 2.17
4061 5775 3.821421 ATAAGAGGCCGTTCGAAATCT 57.179 42.857 0.00 0.00 0.00 2.40
4062 5776 2.011540 AAGAGGCCGTTCGAAATCTC 57.988 50.000 0.00 4.91 0.00 2.75
4063 5777 1.187087 AGAGGCCGTTCGAAATCTCT 58.813 50.000 0.00 7.17 0.00 3.10
4064 5778 1.135333 AGAGGCCGTTCGAAATCTCTC 59.865 52.381 0.00 5.63 0.00 3.20
4065 5779 0.175989 AGGCCGTTCGAAATCTCTCC 59.824 55.000 0.00 0.00 0.00 3.71
4066 5780 1.146358 GGCCGTTCGAAATCTCTCCG 61.146 60.000 0.00 0.00 0.00 4.63
4067 5781 1.753468 GCCGTTCGAAATCTCTCCGC 61.753 60.000 0.00 0.00 0.00 5.54
4068 5782 0.179134 CCGTTCGAAATCTCTCCGCT 60.179 55.000 0.00 0.00 0.00 5.52
4069 5783 1.192793 CGTTCGAAATCTCTCCGCTC 58.807 55.000 0.00 0.00 0.00 5.03
4070 5784 1.562017 GTTCGAAATCTCTCCGCTCC 58.438 55.000 0.00 0.00 0.00 4.70
4071 5785 0.100682 TTCGAAATCTCTCCGCTCCG 59.899 55.000 0.00 0.00 0.00 4.63
4072 5786 1.030488 TCGAAATCTCTCCGCTCCGT 61.030 55.000 0.00 0.00 0.00 4.69
4073 5787 0.661552 CGAAATCTCTCCGCTCCGTA 59.338 55.000 0.00 0.00 0.00 4.02
4074 5788 1.065102 CGAAATCTCTCCGCTCCGTAA 59.935 52.381 0.00 0.00 0.00 3.18
4075 5789 2.461903 GAAATCTCTCCGCTCCGTAAC 58.538 52.381 0.00 0.00 0.00 2.50
4076 5790 1.765230 AATCTCTCCGCTCCGTAACT 58.235 50.000 0.00 0.00 0.00 2.24
4077 5791 1.310904 ATCTCTCCGCTCCGTAACTC 58.689 55.000 0.00 0.00 0.00 3.01
4078 5792 0.747283 TCTCTCCGCTCCGTAACTCC 60.747 60.000 0.00 0.00 0.00 3.85
4079 5793 2.049475 CTCTCCGCTCCGTAACTCCG 62.049 65.000 0.00 0.00 0.00 4.63
4080 5794 3.753070 CTCCGCTCCGTAACTCCGC 62.753 68.421 0.00 0.00 0.00 5.54
4081 5795 4.867599 CCGCTCCGTAACTCCGCC 62.868 72.222 0.00 0.00 0.00 6.13
4083 5797 4.125695 GCTCCGTAACTCCGCCGT 62.126 66.667 0.00 0.00 0.00 5.68
4084 5798 2.202570 CTCCGTAACTCCGCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
4085 5799 3.695022 CTCCGTAACTCCGCCGTGG 62.695 68.421 0.00 0.00 40.09 4.94
4107 5821 2.343758 GAGCGGCACTCAGTGGAA 59.656 61.111 7.00 0.00 45.49 3.53
4108 5822 1.078848 GAGCGGCACTCAGTGGAAT 60.079 57.895 7.00 0.00 45.49 3.01
4109 5823 0.674895 GAGCGGCACTCAGTGGAATT 60.675 55.000 7.00 0.00 45.49 2.17
4110 5824 0.250901 AGCGGCACTCAGTGGAATTT 60.251 50.000 7.00 0.00 33.64 1.82
4111 5825 0.598065 GCGGCACTCAGTGGAATTTT 59.402 50.000 7.00 0.00 33.64 1.82
4112 5826 1.000274 GCGGCACTCAGTGGAATTTTT 60.000 47.619 7.00 0.00 33.64 1.94
4113 5827 2.922335 GCGGCACTCAGTGGAATTTTTC 60.922 50.000 7.00 0.00 33.64 2.29
4128 5842 7.682593 GGAATTTTTCCTTTTTGCATGTTTG 57.317 32.000 0.00 0.00 46.57 2.93
4129 5843 7.479150 GGAATTTTTCCTTTTTGCATGTTTGA 58.521 30.769 0.00 0.00 46.57 2.69
4130 5844 7.972832 GGAATTTTTCCTTTTTGCATGTTTGAA 59.027 29.630 0.00 0.00 46.57 2.69
4131 5845 9.518906 GAATTTTTCCTTTTTGCATGTTTGAAT 57.481 25.926 0.00 0.00 0.00 2.57
4132 5846 9.518906 AATTTTTCCTTTTTGCATGTTTGAATC 57.481 25.926 0.00 0.00 0.00 2.52
4133 5847 7.862512 TTTTCCTTTTTGCATGTTTGAATCT 57.137 28.000 0.00 0.00 0.00 2.40
4134 5848 7.862512 TTTCCTTTTTGCATGTTTGAATCTT 57.137 28.000 0.00 0.00 0.00 2.40
4135 5849 7.481275 TTCCTTTTTGCATGTTTGAATCTTC 57.519 32.000 0.00 0.00 0.00 2.87
4136 5850 6.819284 TCCTTTTTGCATGTTTGAATCTTCT 58.181 32.000 0.00 0.00 0.00 2.85
4137 5851 6.925165 TCCTTTTTGCATGTTTGAATCTTCTC 59.075 34.615 0.00 0.00 0.00 2.87
4138 5852 6.146673 CCTTTTTGCATGTTTGAATCTTCTCC 59.853 38.462 0.00 0.00 0.00 3.71
4139 5853 5.787953 TTTGCATGTTTGAATCTTCTCCA 57.212 34.783 0.00 0.00 0.00 3.86
4140 5854 4.771590 TGCATGTTTGAATCTTCTCCAC 57.228 40.909 0.00 0.00 0.00 4.02
4141 5855 3.189080 TGCATGTTTGAATCTTCTCCACG 59.811 43.478 0.00 0.00 0.00 4.94
4142 5856 3.436704 GCATGTTTGAATCTTCTCCACGA 59.563 43.478 0.00 0.00 0.00 4.35
4143 5857 4.670221 GCATGTTTGAATCTTCTCCACGAC 60.670 45.833 0.00 0.00 0.00 4.34
4144 5858 3.399330 TGTTTGAATCTTCTCCACGACC 58.601 45.455 0.00 0.00 0.00 4.79
4145 5859 3.071023 TGTTTGAATCTTCTCCACGACCT 59.929 43.478 0.00 0.00 0.00 3.85
4146 5860 4.065789 GTTTGAATCTTCTCCACGACCTT 58.934 43.478 0.00 0.00 0.00 3.50
4147 5861 3.594603 TGAATCTTCTCCACGACCTTC 57.405 47.619 0.00 0.00 0.00 3.46
4148 5862 2.897326 TGAATCTTCTCCACGACCTTCA 59.103 45.455 0.00 0.00 0.00 3.02
4149 5863 3.323691 TGAATCTTCTCCACGACCTTCAA 59.676 43.478 0.00 0.00 0.00 2.69
4150 5864 2.814280 TCTTCTCCACGACCTTCAAC 57.186 50.000 0.00 0.00 0.00 3.18
4151 5865 1.343465 TCTTCTCCACGACCTTCAACC 59.657 52.381 0.00 0.00 0.00 3.77
4152 5866 1.070134 CTTCTCCACGACCTTCAACCA 59.930 52.381 0.00 0.00 0.00 3.67
4153 5867 0.391597 TCTCCACGACCTTCAACCAC 59.608 55.000 0.00 0.00 0.00 4.16
4154 5868 0.944311 CTCCACGACCTTCAACCACG 60.944 60.000 0.00 0.00 0.00 4.94
4155 5869 1.068417 CCACGACCTTCAACCACGA 59.932 57.895 0.00 0.00 0.00 4.35
4156 5870 0.531090 CCACGACCTTCAACCACGAA 60.531 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.444183 AGCAACTACAATCTAGTTAAAAGTGCA 59.556 33.333 0.00 0.00 36.14 4.57
1 2 7.807680 AGCAACTACAATCTAGTTAAAAGTGC 58.192 34.615 0.00 0.00 36.14 4.40
35 36 9.472361 CTTGACTGAGATTTTTCACAATTGATT 57.528 29.630 13.59 0.00 0.00 2.57
36 37 8.636213 ACTTGACTGAGATTTTTCACAATTGAT 58.364 29.630 13.59 0.00 0.00 2.57
37 38 7.999679 ACTTGACTGAGATTTTTCACAATTGA 58.000 30.769 13.59 0.00 0.00 2.57
38 39 9.173939 GTACTTGACTGAGATTTTTCACAATTG 57.826 33.333 3.24 3.24 0.00 2.32
39 40 9.125026 AGTACTTGACTGAGATTTTTCACAATT 57.875 29.630 0.00 0.00 36.87 2.32
40 41 8.682936 AGTACTTGACTGAGATTTTTCACAAT 57.317 30.769 0.00 0.00 36.87 2.71
41 42 7.226720 GGAGTACTTGACTGAGATTTTTCACAA 59.773 37.037 0.00 0.00 39.06 3.33
42 43 6.706270 GGAGTACTTGACTGAGATTTTTCACA 59.294 38.462 0.00 0.00 39.06 3.58
43 44 6.706270 TGGAGTACTTGACTGAGATTTTTCAC 59.294 38.462 0.00 0.00 39.06 3.18
44 45 6.826668 TGGAGTACTTGACTGAGATTTTTCA 58.173 36.000 0.00 0.00 39.06 2.69
45 46 7.730364 TTGGAGTACTTGACTGAGATTTTTC 57.270 36.000 0.00 0.00 39.06 2.29
46 47 8.697507 AATTGGAGTACTTGACTGAGATTTTT 57.302 30.769 0.00 0.00 39.06 1.94
47 48 9.442047 CTAATTGGAGTACTTGACTGAGATTTT 57.558 33.333 0.00 0.00 39.06 1.82
48 49 8.598041 ACTAATTGGAGTACTTGACTGAGATTT 58.402 33.333 0.00 0.00 39.06 2.17
49 50 8.140112 ACTAATTGGAGTACTTGACTGAGATT 57.860 34.615 0.00 0.00 39.06 2.40
50 51 7.726033 ACTAATTGGAGTACTTGACTGAGAT 57.274 36.000 0.00 0.00 39.06 2.75
51 52 8.645814 TTACTAATTGGAGTACTTGACTGAGA 57.354 34.615 0.00 0.00 39.06 3.27
102 103 5.613329 TGTATCGTCTAGGGTTGTGTTTTT 58.387 37.500 0.00 0.00 0.00 1.94
103 104 5.217978 TGTATCGTCTAGGGTTGTGTTTT 57.782 39.130 0.00 0.00 0.00 2.43
104 105 4.877378 TGTATCGTCTAGGGTTGTGTTT 57.123 40.909 0.00 0.00 0.00 2.83
105 106 4.877378 TTGTATCGTCTAGGGTTGTGTT 57.123 40.909 0.00 0.00 0.00 3.32
106 107 4.877378 TTTGTATCGTCTAGGGTTGTGT 57.123 40.909 0.00 0.00 0.00 3.72
583 584 4.497300 ACCATCGCCAAAAGATGAATTTG 58.503 39.130 7.67 0.00 46.09 2.32
584 585 4.463891 AGACCATCGCCAAAAGATGAATTT 59.536 37.500 7.67 0.00 46.09 1.82
585 586 4.019174 AGACCATCGCCAAAAGATGAATT 58.981 39.130 7.67 0.00 46.09 2.17
586 587 3.624777 AGACCATCGCCAAAAGATGAAT 58.375 40.909 7.67 0.00 46.09 2.57
587 588 3.009723 GAGACCATCGCCAAAAGATGAA 58.990 45.455 7.67 0.00 46.09 2.57
588 589 2.237143 AGAGACCATCGCCAAAAGATGA 59.763 45.455 7.67 0.00 46.09 2.92
589 590 2.636830 AGAGACCATCGCCAAAAGATG 58.363 47.619 0.00 0.00 43.65 2.90
590 591 3.356529 AAGAGACCATCGCCAAAAGAT 57.643 42.857 0.00 0.00 0.00 2.40
591 592 2.859165 AAGAGACCATCGCCAAAAGA 57.141 45.000 0.00 0.00 0.00 2.52
592 593 5.567138 AATTAAGAGACCATCGCCAAAAG 57.433 39.130 0.00 0.00 0.00 2.27
593 594 5.475220 TGAAATTAAGAGACCATCGCCAAAA 59.525 36.000 0.00 0.00 0.00 2.44
594 595 5.007034 TGAAATTAAGAGACCATCGCCAAA 58.993 37.500 0.00 0.00 0.00 3.28
595 596 4.584874 TGAAATTAAGAGACCATCGCCAA 58.415 39.130 0.00 0.00 0.00 4.52
596 597 4.214986 TGAAATTAAGAGACCATCGCCA 57.785 40.909 0.00 0.00 0.00 5.69
597 598 5.332707 GTTTGAAATTAAGAGACCATCGCC 58.667 41.667 0.00 0.00 0.00 5.54
598 599 5.332707 GGTTTGAAATTAAGAGACCATCGC 58.667 41.667 0.00 0.00 0.00 4.58
599 600 5.447279 CCGGTTTGAAATTAAGAGACCATCG 60.447 44.000 0.00 0.00 0.00 3.84
600 601 5.646360 TCCGGTTTGAAATTAAGAGACCATC 59.354 40.000 0.00 0.00 0.00 3.51
601 602 5.414765 GTCCGGTTTGAAATTAAGAGACCAT 59.585 40.000 0.00 0.00 0.00 3.55
602 603 4.758165 GTCCGGTTTGAAATTAAGAGACCA 59.242 41.667 0.00 0.00 0.00 4.02
603 604 5.001874 AGTCCGGTTTGAAATTAAGAGACC 58.998 41.667 0.00 0.00 0.00 3.85
604 605 6.204108 TCAAGTCCGGTTTGAAATTAAGAGAC 59.796 38.462 17.69 0.00 31.98 3.36
605 606 6.204108 GTCAAGTCCGGTTTGAAATTAAGAGA 59.796 38.462 20.38 0.00 36.41 3.10
606 607 6.017440 TGTCAAGTCCGGTTTGAAATTAAGAG 60.017 38.462 20.38 0.00 36.41 2.85
607 608 5.823570 TGTCAAGTCCGGTTTGAAATTAAGA 59.176 36.000 20.38 0.49 36.41 2.10
608 609 6.067263 TGTCAAGTCCGGTTTGAAATTAAG 57.933 37.500 20.38 0.00 36.41 1.85
609 610 6.642707 ATGTCAAGTCCGGTTTGAAATTAA 57.357 33.333 20.38 8.91 36.41 1.40
610 611 6.642707 AATGTCAAGTCCGGTTTGAAATTA 57.357 33.333 25.20 14.40 39.52 1.40
611 612 5.529581 AATGTCAAGTCCGGTTTGAAATT 57.470 34.783 22.88 22.88 37.55 1.82
612 613 5.068460 TGAAATGTCAAGTCCGGTTTGAAAT 59.932 36.000 20.38 18.35 36.41 2.17
613 614 4.399618 TGAAATGTCAAGTCCGGTTTGAAA 59.600 37.500 20.38 17.20 36.41 2.69
614 615 3.948473 TGAAATGTCAAGTCCGGTTTGAA 59.052 39.130 20.38 13.46 36.41 2.69
615 616 3.314080 GTGAAATGTCAAGTCCGGTTTGA 59.686 43.478 16.56 16.56 34.87 2.69
616 617 3.550030 GGTGAAATGTCAAGTCCGGTTTG 60.550 47.826 0.00 8.25 34.87 2.93
617 618 2.621526 GGTGAAATGTCAAGTCCGGTTT 59.378 45.455 0.00 0.00 34.87 3.27
618 619 2.158667 AGGTGAAATGTCAAGTCCGGTT 60.159 45.455 0.00 0.00 34.87 4.44
619 620 1.420138 AGGTGAAATGTCAAGTCCGGT 59.580 47.619 0.00 0.00 34.87 5.28
620 621 2.185004 AGGTGAAATGTCAAGTCCGG 57.815 50.000 0.00 0.00 34.87 5.14
621 622 3.138304 TGAAGGTGAAATGTCAAGTCCG 58.862 45.455 0.00 0.00 34.87 4.79
622 623 6.817765 TTATGAAGGTGAAATGTCAAGTCC 57.182 37.500 0.00 0.00 34.87 3.85
623 624 9.346725 GAAATTATGAAGGTGAAATGTCAAGTC 57.653 33.333 0.00 0.00 34.87 3.01
624 625 9.082313 AGAAATTATGAAGGTGAAATGTCAAGT 57.918 29.630 0.00 0.00 34.87 3.16
651 652 9.045223 GCATTTCCAGTTTTCTATTTTTCTGTT 57.955 29.630 0.00 0.00 0.00 3.16
652 653 7.657354 GGCATTTCCAGTTTTCTATTTTTCTGT 59.343 33.333 0.00 0.00 34.01 3.41
653 654 7.656948 TGGCATTTCCAGTTTTCTATTTTTCTG 59.343 33.333 0.00 0.00 40.72 3.02
654 655 7.734942 TGGCATTTCCAGTTTTCTATTTTTCT 58.265 30.769 0.00 0.00 40.72 2.52
655 656 7.961325 TGGCATTTCCAGTTTTCTATTTTTC 57.039 32.000 0.00 0.00 40.72 2.29
669 670 1.228094 TGCTGACGTGGCATTTCCA 60.228 52.632 8.47 0.00 44.18 3.53
681 682 1.001641 ACCATTCTGGGCTGCTGAC 60.002 57.895 0.00 0.00 43.37 3.51
689 690 1.378514 CCCGGTTGACCATTCTGGG 60.379 63.158 0.00 0.00 43.37 4.45
694 704 2.349755 CGTCCCCGGTTGACCATT 59.650 61.111 13.90 0.00 35.14 3.16
706 716 1.592400 GGTTTAAGCCCAAGCGTCCC 61.592 60.000 0.00 0.00 46.67 4.46
738 748 1.448922 TTCGCTTTGGGTTTGTCCGG 61.449 55.000 0.00 0.00 37.00 5.14
755 765 2.348966 GCTCTGTTTCTGTTCACGCTTC 60.349 50.000 0.00 0.00 0.00 3.86
756 766 1.599542 GCTCTGTTTCTGTTCACGCTT 59.400 47.619 0.00 0.00 0.00 4.68
757 767 1.221414 GCTCTGTTTCTGTTCACGCT 58.779 50.000 0.00 0.00 0.00 5.07
758 768 0.937304 TGCTCTGTTTCTGTTCACGC 59.063 50.000 0.00 0.00 0.00 5.34
759 769 2.473816 TCTGCTCTGTTTCTGTTCACG 58.526 47.619 0.00 0.00 0.00 4.35
760 770 3.623060 TGTTCTGCTCTGTTTCTGTTCAC 59.377 43.478 0.00 0.00 0.00 3.18
856 871 1.618030 GAGCAGGAGGAGGAGGAGA 59.382 63.158 0.00 0.00 0.00 3.71
877 892 1.821136 GGGCTGGTTTGGAAATGAGAG 59.179 52.381 0.00 0.00 0.00 3.20
894 909 2.668550 GTCGTGGGTCTGTTGGGC 60.669 66.667 0.00 0.00 0.00 5.36
902 927 3.429141 TCGCTCGAGTCGTGGGTC 61.429 66.667 24.77 6.19 35.46 4.46
905 930 4.477975 GGGTCGCTCGAGTCGTGG 62.478 72.222 22.33 8.06 0.00 4.94
906 931 3.733960 TGGGTCGCTCGAGTCGTG 61.734 66.667 22.33 11.54 0.00 4.35
907 932 3.735029 GTGGGTCGCTCGAGTCGT 61.735 66.667 22.33 0.00 0.00 4.34
908 933 4.477975 GGTGGGTCGCTCGAGTCG 62.478 72.222 15.13 17.39 0.00 4.18
909 934 4.477975 CGGTGGGTCGCTCGAGTC 62.478 72.222 15.13 5.54 0.00 3.36
918 943 4.699522 GGGTCAGCACGGTGGGTC 62.700 72.222 10.60 0.00 0.00 4.46
976 1011 0.671781 CTTCCTGACACAGAAGGGCG 60.672 60.000 0.00 0.00 34.08 6.13
987 1022 2.825836 CCCATGCCGCTTCCTGAC 60.826 66.667 0.00 0.00 0.00 3.51
1017 1067 2.049433 CTCCACGTCGACCACCAC 60.049 66.667 10.58 0.00 0.00 4.16
1371 2793 6.126796 ACCATTAAAAATCCATTCCACCCATC 60.127 38.462 0.00 0.00 0.00 3.51
1378 2912 5.879777 CCAACCACCATTAAAAATCCATTCC 59.120 40.000 0.00 0.00 0.00 3.01
1386 2920 5.189934 ACAAAGACCCAACCACCATTAAAAA 59.810 36.000 0.00 0.00 0.00 1.94
1665 3221 3.880846 CGGGCCAAAGAGATGCGC 61.881 66.667 4.39 0.00 34.91 6.09
1667 3223 3.521796 GGCGGGCCAAAGAGATGC 61.522 66.667 4.39 0.00 35.81 3.91
1669 3225 4.489771 CGGGCGGGCCAAAGAGAT 62.490 66.667 21.43 0.00 37.98 2.75
1703 3263 2.246739 TGTCACTCGCTGCACTTGC 61.247 57.895 0.00 0.00 42.50 4.01
1704 3264 1.566563 GTGTCACTCGCTGCACTTG 59.433 57.895 0.00 0.00 0.00 3.16
1705 3265 1.951130 CGTGTCACTCGCTGCACTT 60.951 57.895 0.00 0.00 0.00 3.16
2054 3669 2.915349 CATGGAGGTGTCAATGGAGAG 58.085 52.381 0.00 0.00 31.05 3.20
2063 3679 2.234908 AGTACAGAAGCATGGAGGTGTC 59.765 50.000 0.00 0.00 0.00 3.67
2091 3707 1.233950 TGAATTGACGGCGCACACAT 61.234 50.000 10.83 0.00 0.00 3.21
2093 3709 0.109781 ATTGAATTGACGGCGCACAC 60.110 50.000 10.83 0.00 0.00 3.82
2094 3710 0.167908 GATTGAATTGACGGCGCACA 59.832 50.000 10.83 4.81 0.00 4.57
2096 3712 1.016653 TCGATTGAATTGACGGCGCA 61.017 50.000 10.83 2.81 0.00 6.09
2098 3714 2.737467 AATCGATTGAATTGACGGCG 57.263 45.000 10.50 4.80 0.00 6.46
2099 3715 2.531508 GCAAATCGATTGAATTGACGGC 59.468 45.455 12.25 0.00 41.85 5.68
2100 3716 3.757184 TGCAAATCGATTGAATTGACGG 58.243 40.909 12.25 0.00 41.85 4.79
2183 3799 2.725312 GCCGATGAGCTGGACCAGA 61.725 63.158 26.25 4.58 32.44 3.86
2326 3978 0.618680 CTCCACCATCTCCTCCACCA 60.619 60.000 0.00 0.00 0.00 4.17
2548 4218 2.254350 GTGCTTTCGGTTTCGGCC 59.746 61.111 0.00 0.00 36.95 6.13
2549 4219 2.254350 GGTGCTTTCGGTTTCGGC 59.746 61.111 0.00 0.00 36.95 5.54
2556 4226 0.382515 TTTTTCGGTGGTGCTTTCGG 59.617 50.000 0.00 0.00 0.00 4.30
2557 4227 1.332375 TCTTTTTCGGTGGTGCTTTCG 59.668 47.619 0.00 0.00 0.00 3.46
2558 4228 2.727777 GTCTTTTTCGGTGGTGCTTTC 58.272 47.619 0.00 0.00 0.00 2.62
2559 4229 1.064952 CGTCTTTTTCGGTGGTGCTTT 59.935 47.619 0.00 0.00 0.00 3.51
2560 4230 0.661020 CGTCTTTTTCGGTGGTGCTT 59.339 50.000 0.00 0.00 0.00 3.91
2562 4232 0.872388 ATCGTCTTTTTCGGTGGTGC 59.128 50.000 0.00 0.00 0.00 5.01
2564 4234 2.833631 AGATCGTCTTTTTCGGTGGT 57.166 45.000 0.00 0.00 0.00 4.16
2565 4235 3.496884 TCAAAGATCGTCTTTTTCGGTGG 59.503 43.478 9.38 0.38 43.62 4.61
2567 4237 5.744666 TTTCAAAGATCGTCTTTTTCGGT 57.255 34.783 9.38 0.00 43.62 4.69
2568 4238 5.398416 GGTTTTCAAAGATCGTCTTTTTCGG 59.602 40.000 9.38 1.71 43.62 4.30
2569 4239 5.113529 CGGTTTTCAAAGATCGTCTTTTTCG 59.886 40.000 9.38 1.98 43.62 3.46
2570 4240 5.969435 ACGGTTTTCAAAGATCGTCTTTTTC 59.031 36.000 9.38 2.00 43.62 2.29
2571 4241 5.886992 ACGGTTTTCAAAGATCGTCTTTTT 58.113 33.333 9.38 0.00 43.62 1.94
2572 4242 5.494632 ACGGTTTTCAAAGATCGTCTTTT 57.505 34.783 9.38 0.00 43.62 2.27
2575 4245 3.064931 GGACGGTTTTCAAAGATCGTCT 58.935 45.455 15.76 0.00 44.08 4.18
2578 4248 1.127951 CCGGACGGTTTTCAAAGATCG 59.872 52.381 0.00 0.00 0.00 3.69
2586 4256 2.745100 GCCCTCCGGACGGTTTTC 60.745 66.667 19.20 0.81 36.47 2.29
2630 4301 0.314979 GTTTTTGTTTTGCCGCTGCG 60.315 50.000 16.34 16.34 41.78 5.18
2631 4302 0.723981 TGTTTTTGTTTTGCCGCTGC 59.276 45.000 0.00 0.00 38.26 5.25
2632 4303 3.461946 TTTGTTTTTGTTTTGCCGCTG 57.538 38.095 0.00 0.00 0.00 5.18
2688 4359 1.150081 CAGGATCATCCCCACCTGC 59.850 63.158 0.00 0.00 42.30 4.85
2692 4363 0.830648 TCGTTCAGGATCATCCCCAC 59.169 55.000 0.00 0.00 37.19 4.61
3157 4831 4.306967 GGCCGGCCAGCTAGCTAG 62.307 72.222 40.73 16.84 35.81 3.42
3171 4845 4.699522 AGAGTTCGTTGGCCGGCC 62.700 66.667 39.40 39.40 37.11 6.13
3172 4846 3.423154 CAGAGTTCGTTGGCCGGC 61.423 66.667 21.18 21.18 37.11 6.13
3175 4849 1.362406 GCTAGCAGAGTTCGTTGGCC 61.362 60.000 10.63 0.00 0.00 5.36
3189 4863 0.830023 CCTACTCCCTGGAGGCTAGC 60.830 65.000 17.21 6.04 45.88 3.42
3190 4864 0.854218 TCCTACTCCCTGGAGGCTAG 59.146 60.000 17.21 10.21 45.88 3.42
3191 4865 1.315903 TTCCTACTCCCTGGAGGCTA 58.684 55.000 17.21 1.29 45.88 3.93
3192 4866 0.644937 ATTCCTACTCCCTGGAGGCT 59.355 55.000 17.21 0.00 45.88 4.58
3193 4867 1.141858 CAATTCCTACTCCCTGGAGGC 59.858 57.143 17.21 0.00 45.88 4.70
3194 4868 2.436173 GTCAATTCCTACTCCCTGGAGG 59.564 54.545 17.21 2.59 45.88 4.30
3195 4869 3.107601 TGTCAATTCCTACTCCCTGGAG 58.892 50.000 11.68 11.68 46.91 3.86
3196 4870 3.107601 CTGTCAATTCCTACTCCCTGGA 58.892 50.000 0.00 0.00 0.00 3.86
3198 4872 4.826274 TTCTGTCAATTCCTACTCCCTG 57.174 45.455 0.00 0.00 0.00 4.45
3199 4873 5.488919 TCATTTCTGTCAATTCCTACTCCCT 59.511 40.000 0.00 0.00 0.00 4.20
3200 4874 5.586643 GTCATTTCTGTCAATTCCTACTCCC 59.413 44.000 0.00 0.00 0.00 4.30
3204 4884 5.163854 CGTGGTCATTTCTGTCAATTCCTAC 60.164 44.000 0.00 0.00 0.00 3.18
3226 4906 2.986413 ACAGAGAGAGCACGGCGT 60.986 61.111 6.77 6.77 0.00 5.68
3236 4916 5.157067 CGGCATATGTATGTACACAGAGAG 58.843 45.833 0.00 0.00 39.30 3.20
3237 4917 4.558697 GCGGCATATGTATGTACACAGAGA 60.559 45.833 0.00 0.00 39.30 3.10
3238 4918 3.675225 GCGGCATATGTATGTACACAGAG 59.325 47.826 0.00 0.00 39.30 3.35
3239 4919 3.554129 GGCGGCATATGTATGTACACAGA 60.554 47.826 3.07 0.00 39.30 3.41
3240 4920 2.736721 GGCGGCATATGTATGTACACAG 59.263 50.000 3.07 0.00 39.30 3.66
3251 4931 1.460743 CGTGTCATTAGGCGGCATATG 59.539 52.381 13.08 14.00 0.00 1.78
3252 4932 1.795768 CGTGTCATTAGGCGGCATAT 58.204 50.000 13.08 0.07 0.00 1.78
3253 4933 0.878523 GCGTGTCATTAGGCGGCATA 60.879 55.000 13.08 0.00 0.00 3.14
3254 4934 2.180204 GCGTGTCATTAGGCGGCAT 61.180 57.895 13.08 0.00 0.00 4.40
3255 4935 2.817834 GCGTGTCATTAGGCGGCA 60.818 61.111 13.08 0.00 0.00 5.69
3272 4952 1.741770 AGCTTTCCGTTAGCTGCCG 60.742 57.895 0.00 0.00 46.71 5.69
3273 4953 4.303257 AGCTTTCCGTTAGCTGCC 57.697 55.556 0.00 0.00 46.71 4.85
3309 4989 4.221422 ATCCGTCCGTCCATGGCG 62.221 66.667 18.11 18.11 0.00 5.69
3310 4990 2.588877 CATCCGTCCGTCCATGGC 60.589 66.667 6.96 0.96 0.00 4.40
3311 4991 2.108976 CCATCCGTCCGTCCATGG 59.891 66.667 4.97 4.97 0.00 3.66
3312 4992 2.588877 GCCATCCGTCCGTCCATG 60.589 66.667 0.00 0.00 0.00 3.66
3313 4993 3.861797 GGCCATCCGTCCGTCCAT 61.862 66.667 0.00 0.00 0.00 3.41
3316 4996 4.222847 GAGGGCCATCCGTCCGTC 62.223 72.222 5.99 0.00 40.47 4.79
3320 5000 2.792947 TTAGCGAGGGCCATCCGTC 61.793 63.158 12.67 1.12 42.35 4.79
3321 5001 2.762459 TTAGCGAGGGCCATCCGT 60.762 61.111 12.67 1.15 41.24 4.69
3322 5002 2.280186 GTTAGCGAGGGCCATCCG 60.280 66.667 12.67 9.07 41.24 4.18
3356 5036 5.697178 TCTGCTCTGATGATCTACGTACTAC 59.303 44.000 0.00 0.00 0.00 2.73
3357 5037 5.855045 TCTGCTCTGATGATCTACGTACTA 58.145 41.667 0.00 0.00 0.00 1.82
3358 5038 4.709250 TCTGCTCTGATGATCTACGTACT 58.291 43.478 0.00 0.00 0.00 2.73
3359 5039 4.612712 GCTCTGCTCTGATGATCTACGTAC 60.613 50.000 0.00 0.00 0.00 3.67
3360 5040 3.500299 GCTCTGCTCTGATGATCTACGTA 59.500 47.826 0.00 0.00 0.00 3.57
3361 5041 2.293122 GCTCTGCTCTGATGATCTACGT 59.707 50.000 0.00 0.00 0.00 3.57
3362 5042 2.292845 TGCTCTGCTCTGATGATCTACG 59.707 50.000 0.00 0.00 0.00 3.51
3392 5072 1.135402 CGTGCCATCAAACCCTAAAGC 60.135 52.381 0.00 0.00 0.00 3.51
3400 5080 1.586154 CCTGTCCCGTGCCATCAAAC 61.586 60.000 0.00 0.00 0.00 2.93
3412 5092 3.787001 CCGGCCTTCTCCTGTCCC 61.787 72.222 0.00 0.00 0.00 4.46
3466 5146 0.466124 GAATCCGTGGAGGGAGAAGG 59.534 60.000 0.00 0.00 40.02 3.46
3474 5154 4.891727 CGGCCCGAATCCGTGGAG 62.892 72.222 0.00 0.00 41.85 3.86
3486 5166 2.973600 TACACACAAACGCGGCCC 60.974 61.111 12.47 0.00 0.00 5.80
3533 5216 6.708054 ACTAAAGATGAAGAATAGCCGGAATG 59.292 38.462 5.05 0.00 0.00 2.67
3549 5232 4.261405 CCGTCTCCTGCTCTACTAAAGATG 60.261 50.000 0.00 0.00 32.41 2.90
3551 5234 3.054582 TCCGTCTCCTGCTCTACTAAAGA 60.055 47.826 0.00 0.00 0.00 2.52
3552 5235 3.280295 TCCGTCTCCTGCTCTACTAAAG 58.720 50.000 0.00 0.00 0.00 1.85
3554 5237 3.361281 TTCCGTCTCCTGCTCTACTAA 57.639 47.619 0.00 0.00 0.00 2.24
3556 5239 2.217510 TTTCCGTCTCCTGCTCTACT 57.782 50.000 0.00 0.00 0.00 2.57
3557 5240 2.417515 CCTTTTCCGTCTCCTGCTCTAC 60.418 54.545 0.00 0.00 0.00 2.59
3559 5242 0.610687 CCTTTTCCGTCTCCTGCTCT 59.389 55.000 0.00 0.00 0.00 4.09
3560 5243 0.608640 TCCTTTTCCGTCTCCTGCTC 59.391 55.000 0.00 0.00 0.00 4.26
3561 5244 1.065854 CATCCTTTTCCGTCTCCTGCT 60.066 52.381 0.00 0.00 0.00 4.24
3562 5245 1.066143 TCATCCTTTTCCGTCTCCTGC 60.066 52.381 0.00 0.00 0.00 4.85
3563 5246 3.118629 TCATCATCCTTTTCCGTCTCCTG 60.119 47.826 0.00 0.00 0.00 3.86
3564 5247 3.107601 TCATCATCCTTTTCCGTCTCCT 58.892 45.455 0.00 0.00 0.00 3.69
3565 5248 3.543680 TCATCATCCTTTTCCGTCTCC 57.456 47.619 0.00 0.00 0.00 3.71
3566 5249 5.665381 GATTCATCATCCTTTTCCGTCTC 57.335 43.478 0.00 0.00 0.00 3.36
3584 5271 3.122369 CCCCCATTGCTCTGGATTC 57.878 57.895 6.69 0.00 38.69 2.52
3603 5290 0.463833 CCCATACAGCCTTTCCCGTC 60.464 60.000 0.00 0.00 0.00 4.79
3606 5293 0.853530 ATCCCCATACAGCCTTTCCC 59.146 55.000 0.00 0.00 0.00 3.97
3612 5299 0.555769 TTTCCCATCCCCATACAGCC 59.444 55.000 0.00 0.00 0.00 4.85
3659 5346 0.478507 GAGAGGGAGAGAGAGAGGGG 59.521 65.000 0.00 0.00 0.00 4.79
3662 5349 3.669939 AAAGGAGAGGGAGAGAGAGAG 57.330 52.381 0.00 0.00 0.00 3.20
3663 5350 4.349365 GAAAAAGGAGAGGGAGAGAGAGA 58.651 47.826 0.00 0.00 0.00 3.10
3665 5352 3.093057 CGAAAAAGGAGAGGGAGAGAGA 58.907 50.000 0.00 0.00 0.00 3.10
3666 5353 2.167487 CCGAAAAAGGAGAGGGAGAGAG 59.833 54.545 0.00 0.00 0.00 3.20
3668 5355 1.903183 ACCGAAAAAGGAGAGGGAGAG 59.097 52.381 0.00 0.00 34.73 3.20
3670 5357 2.224548 ACAACCGAAAAAGGAGAGGGAG 60.225 50.000 0.00 0.00 34.73 4.30
3671 5358 1.772453 ACAACCGAAAAAGGAGAGGGA 59.228 47.619 0.00 0.00 34.73 4.20
3672 5359 1.880027 CACAACCGAAAAAGGAGAGGG 59.120 52.381 0.00 0.00 34.73 4.30
3693 5395 1.728825 CGCCATGAATTGTCAACACGG 60.729 52.381 0.00 0.00 37.30 4.94
3713 5415 1.609783 CACCACCCCCAGAGATTCC 59.390 63.158 0.00 0.00 0.00 3.01
3724 5426 1.001393 CCATGTACCACCACCACCC 60.001 63.158 0.00 0.00 0.00 4.61
3728 5430 0.912487 TCCTCCCATGTACCACCACC 60.912 60.000 0.00 0.00 0.00 4.61
3731 5433 2.224209 CGTATTCCTCCCATGTACCACC 60.224 54.545 0.00 0.00 0.00 4.61
3734 5436 1.692519 AGCGTATTCCTCCCATGTACC 59.307 52.381 0.00 0.00 0.00 3.34
3735 5437 3.470645 AAGCGTATTCCTCCCATGTAC 57.529 47.619 0.00 0.00 0.00 2.90
3736 5438 3.199071 ACAAAGCGTATTCCTCCCATGTA 59.801 43.478 0.00 0.00 0.00 2.29
3738 5440 2.355756 CACAAAGCGTATTCCTCCCATG 59.644 50.000 0.00 0.00 0.00 3.66
3739 5441 2.643551 CACAAAGCGTATTCCTCCCAT 58.356 47.619 0.00 0.00 0.00 4.00
3740 5442 1.948611 GCACAAAGCGTATTCCTCCCA 60.949 52.381 0.00 0.00 0.00 4.37
3772 5479 2.045926 GAACCTGCACCGCATCCT 60.046 61.111 0.00 0.00 38.13 3.24
3773 5480 3.499737 CGAACCTGCACCGCATCC 61.500 66.667 0.00 0.00 38.13 3.51
3779 5489 3.251571 CTCTAACTAACGAACCTGCACC 58.748 50.000 0.00 0.00 0.00 5.01
3799 5509 4.740934 GCACAGTGGACTTGAGTTTAGACT 60.741 45.833 1.84 0.00 39.32 3.24
3800 5510 3.495001 GCACAGTGGACTTGAGTTTAGAC 59.505 47.826 1.84 0.00 0.00 2.59
3801 5511 3.388024 AGCACAGTGGACTTGAGTTTAGA 59.612 43.478 1.84 0.00 0.00 2.10
3802 5512 3.496130 CAGCACAGTGGACTTGAGTTTAG 59.504 47.826 1.84 0.00 0.00 1.85
3803 5513 3.466836 CAGCACAGTGGACTTGAGTTTA 58.533 45.455 1.84 0.00 0.00 2.01
3804 5514 2.292267 CAGCACAGTGGACTTGAGTTT 58.708 47.619 1.84 0.00 0.00 2.66
3809 5519 1.512996 CTGGCAGCACAGTGGACTTG 61.513 60.000 0.00 0.00 33.81 3.16
3844 5554 3.151022 CGAGGAGGAGGACAGGGC 61.151 72.222 0.00 0.00 0.00 5.19
3867 5577 4.215613 GCCAAGAAAAATAAGACCACGAGT 59.784 41.667 0.00 0.00 0.00 4.18
3871 5581 7.035612 CCTAATGCCAAGAAAAATAAGACCAC 58.964 38.462 0.00 0.00 0.00 4.16
3879 5589 8.839343 CAAAGAAAACCTAATGCCAAGAAAAAT 58.161 29.630 0.00 0.00 0.00 1.82
3882 5592 5.757808 GCAAAGAAAACCTAATGCCAAGAAA 59.242 36.000 0.00 0.00 33.93 2.52
3885 5595 4.886579 AGCAAAGAAAACCTAATGCCAAG 58.113 39.130 0.00 0.00 38.12 3.61
3905 5617 4.390501 CCGTTTTTGTTTTTGTGTCAAGC 58.609 39.130 0.00 0.00 0.00 4.01
3909 5621 3.430556 ACTGCCGTTTTTGTTTTTGTGTC 59.569 39.130 0.00 0.00 0.00 3.67
3911 5623 4.397064 AACTGCCGTTTTTGTTTTTGTG 57.603 36.364 0.00 0.00 0.00 3.33
3912 5624 4.752604 AGAAACTGCCGTTTTTGTTTTTGT 59.247 33.333 7.71 0.00 43.09 2.83
3919 5631 2.863740 GGGAAAGAAACTGCCGTTTTTG 59.136 45.455 7.71 0.00 43.09 2.44
3926 5638 1.266989 CAACTCGGGAAAGAAACTGCC 59.733 52.381 0.00 0.00 0.00 4.85
3927 5639 1.947456 ACAACTCGGGAAAGAAACTGC 59.053 47.619 0.00 0.00 0.00 4.40
3928 5640 4.351192 CAAACAACTCGGGAAAGAAACTG 58.649 43.478 0.00 0.00 0.00 3.16
3929 5641 3.181490 GCAAACAACTCGGGAAAGAAACT 60.181 43.478 0.00 0.00 0.00 2.66
3930 5642 3.113322 GCAAACAACTCGGGAAAGAAAC 58.887 45.455 0.00 0.00 0.00 2.78
3931 5643 3.020984 AGCAAACAACTCGGGAAAGAAA 58.979 40.909 0.00 0.00 0.00 2.52
3934 5648 3.436700 AAAGCAAACAACTCGGGAAAG 57.563 42.857 0.00 0.00 0.00 2.62
3935 5649 4.202070 CCTTAAAGCAAACAACTCGGGAAA 60.202 41.667 0.00 0.00 0.00 3.13
3938 5652 2.030274 CCCTTAAAGCAAACAACTCGGG 60.030 50.000 0.00 0.00 0.00 5.14
3941 5655 3.642705 CTGCCCTTAAAGCAAACAACTC 58.357 45.455 1.87 0.00 40.35 3.01
3962 5676 3.426568 GTGGTTGAGAGCTGGCGC 61.427 66.667 0.00 0.00 0.00 6.53
3963 5677 0.957395 AATGTGGTTGAGAGCTGGCG 60.957 55.000 0.00 0.00 0.00 5.69
3964 5678 1.251251 AAATGTGGTTGAGAGCTGGC 58.749 50.000 0.00 0.00 0.00 4.85
3966 5680 3.120408 CGAGAAAATGTGGTTGAGAGCTG 60.120 47.826 0.00 0.00 0.00 4.24
3967 5681 3.070018 CGAGAAAATGTGGTTGAGAGCT 58.930 45.455 0.00 0.00 0.00 4.09
3968 5682 2.160417 CCGAGAAAATGTGGTTGAGAGC 59.840 50.000 0.00 0.00 0.00 4.09
3969 5683 2.160417 GCCGAGAAAATGTGGTTGAGAG 59.840 50.000 0.00 0.00 0.00 3.20
3970 5684 2.151202 GCCGAGAAAATGTGGTTGAGA 58.849 47.619 0.00 0.00 0.00 3.27
3971 5685 1.200020 GGCCGAGAAAATGTGGTTGAG 59.800 52.381 0.00 0.00 0.00 3.02
3972 5686 1.243902 GGCCGAGAAAATGTGGTTGA 58.756 50.000 0.00 0.00 0.00 3.18
3973 5687 0.958091 TGGCCGAGAAAATGTGGTTG 59.042 50.000 0.00 0.00 0.00 3.77
3974 5688 1.202879 TCTGGCCGAGAAAATGTGGTT 60.203 47.619 0.00 0.00 0.00 3.67
3975 5689 0.400213 TCTGGCCGAGAAAATGTGGT 59.600 50.000 0.00 0.00 0.00 4.16
3976 5690 0.804989 GTCTGGCCGAGAAAATGTGG 59.195 55.000 0.00 0.00 30.26 4.17
3977 5691 1.466167 CTGTCTGGCCGAGAAAATGTG 59.534 52.381 0.00 0.00 30.26 3.21
3978 5692 1.347707 TCTGTCTGGCCGAGAAAATGT 59.652 47.619 0.00 0.00 30.26 2.71
3979 5693 2.005451 CTCTGTCTGGCCGAGAAAATG 58.995 52.381 0.00 0.00 30.26 2.32
3980 5694 1.677217 GCTCTGTCTGGCCGAGAAAAT 60.677 52.381 8.61 0.00 30.26 1.82
3981 5695 0.320771 GCTCTGTCTGGCCGAGAAAA 60.321 55.000 8.61 0.21 30.26 2.29
3982 5696 1.293498 GCTCTGTCTGGCCGAGAAA 59.707 57.895 8.61 2.35 30.26 2.52
3983 5697 1.908299 TGCTCTGTCTGGCCGAGAA 60.908 57.895 8.61 0.00 30.26 2.87
3984 5698 2.283173 TGCTCTGTCTGGCCGAGA 60.283 61.111 8.61 4.93 0.00 4.04
3985 5699 2.125753 GTGCTCTGTCTGGCCGAG 60.126 66.667 0.00 0.00 0.00 4.63
3986 5700 3.695606 GGTGCTCTGTCTGGCCGA 61.696 66.667 0.00 0.00 0.00 5.54
3987 5701 2.738213 AAAGGTGCTCTGTCTGGCCG 62.738 60.000 0.00 0.00 0.00 6.13
3988 5702 0.324943 TAAAGGTGCTCTGTCTGGCC 59.675 55.000 0.00 0.00 0.00 5.36
3989 5703 2.284190 GATAAAGGTGCTCTGTCTGGC 58.716 52.381 0.00 0.00 0.00 4.85
3990 5704 3.616956 TGATAAAGGTGCTCTGTCTGG 57.383 47.619 0.00 0.00 0.00 3.86
3991 5705 3.937706 CCTTGATAAAGGTGCTCTGTCTG 59.062 47.826 0.00 0.00 35.22 3.51
3992 5706 3.054802 CCCTTGATAAAGGTGCTCTGTCT 60.055 47.826 8.14 0.00 38.28 3.41
3993 5707 3.274288 CCCTTGATAAAGGTGCTCTGTC 58.726 50.000 8.14 0.00 38.28 3.51
3994 5708 2.644798 ACCCTTGATAAAGGTGCTCTGT 59.355 45.455 8.14 0.00 38.28 3.41
3995 5709 3.274288 GACCCTTGATAAAGGTGCTCTG 58.726 50.000 8.14 0.00 38.28 3.35
3996 5710 2.239907 GGACCCTTGATAAAGGTGCTCT 59.760 50.000 8.14 0.00 38.82 4.09
3997 5711 2.026262 TGGACCCTTGATAAAGGTGCTC 60.026 50.000 8.14 0.00 42.09 4.26
3998 5712 1.992557 TGGACCCTTGATAAAGGTGCT 59.007 47.619 8.14 0.00 42.09 4.40
3999 5713 2.507407 TGGACCCTTGATAAAGGTGC 57.493 50.000 8.14 2.57 41.95 5.01
4000 5714 3.968265 ACATGGACCCTTGATAAAGGTG 58.032 45.455 8.14 1.74 38.28 4.00
4001 5715 5.994416 ATACATGGACCCTTGATAAAGGT 57.006 39.130 8.14 0.00 38.28 3.50
4002 5716 5.770162 GGAATACATGGACCCTTGATAAAGG 59.230 44.000 1.11 1.11 39.68 3.11
4003 5717 6.605119 AGGAATACATGGACCCTTGATAAAG 58.395 40.000 8.68 0.00 0.00 1.85
4004 5718 6.590656 AGGAATACATGGACCCTTGATAAA 57.409 37.500 8.68 0.00 0.00 1.40
4005 5719 6.410388 GGAAGGAATACATGGACCCTTGATAA 60.410 42.308 16.05 0.00 37.36 1.75
4006 5720 5.073144 GGAAGGAATACATGGACCCTTGATA 59.927 44.000 16.05 0.00 37.36 2.15
4007 5721 4.141158 GGAAGGAATACATGGACCCTTGAT 60.141 45.833 16.05 0.00 37.36 2.57
4008 5722 3.202151 GGAAGGAATACATGGACCCTTGA 59.798 47.826 16.05 0.00 37.36 3.02
4009 5723 3.555966 GGAAGGAATACATGGACCCTTG 58.444 50.000 16.05 0.93 37.36 3.61
4010 5724 2.172717 CGGAAGGAATACATGGACCCTT 59.827 50.000 12.09 12.09 39.70 3.95
4011 5725 1.768870 CGGAAGGAATACATGGACCCT 59.231 52.381 0.00 0.00 0.00 4.34
4012 5726 1.489230 ACGGAAGGAATACATGGACCC 59.511 52.381 0.00 0.00 0.00 4.46
4013 5727 3.277142 AACGGAAGGAATACATGGACC 57.723 47.619 0.00 0.00 0.00 4.46
4014 5728 4.514401 AGAAACGGAAGGAATACATGGAC 58.486 43.478 0.00 0.00 0.00 4.02
4015 5729 4.837093 AGAAACGGAAGGAATACATGGA 57.163 40.909 0.00 0.00 0.00 3.41
4016 5730 6.995511 TTTAGAAACGGAAGGAATACATGG 57.004 37.500 0.00 0.00 0.00 3.66
4022 5736 9.780186 CCTCTTATATTTAGAAACGGAAGGAAT 57.220 33.333 0.00 0.00 0.00 3.01
4023 5737 7.713942 GCCTCTTATATTTAGAAACGGAAGGAA 59.286 37.037 0.00 0.00 0.00 3.36
4024 5738 7.215085 GCCTCTTATATTTAGAAACGGAAGGA 58.785 38.462 0.00 0.00 0.00 3.36
4025 5739 6.427242 GGCCTCTTATATTTAGAAACGGAAGG 59.573 42.308 0.00 0.00 0.00 3.46
4026 5740 6.145696 CGGCCTCTTATATTTAGAAACGGAAG 59.854 42.308 0.00 0.00 0.00 3.46
4027 5741 5.987347 CGGCCTCTTATATTTAGAAACGGAA 59.013 40.000 0.00 0.00 0.00 4.30
4028 5742 5.069516 ACGGCCTCTTATATTTAGAAACGGA 59.930 40.000 0.00 0.00 0.00 4.69
4029 5743 5.295152 ACGGCCTCTTATATTTAGAAACGG 58.705 41.667 0.00 0.00 0.00 4.44
4030 5744 6.345565 CGAACGGCCTCTTATATTTAGAAACG 60.346 42.308 0.00 0.00 0.00 3.60
4031 5745 6.698766 TCGAACGGCCTCTTATATTTAGAAAC 59.301 38.462 0.00 0.00 0.00 2.78
4032 5746 6.808829 TCGAACGGCCTCTTATATTTAGAAA 58.191 36.000 0.00 0.00 0.00 2.52
4033 5747 6.395426 TCGAACGGCCTCTTATATTTAGAA 57.605 37.500 0.00 0.00 0.00 2.10
4034 5748 6.395426 TTCGAACGGCCTCTTATATTTAGA 57.605 37.500 0.00 0.00 0.00 2.10
4035 5749 7.599245 AGATTTCGAACGGCCTCTTATATTTAG 59.401 37.037 0.00 0.00 0.00 1.85
4036 5750 7.439381 AGATTTCGAACGGCCTCTTATATTTA 58.561 34.615 0.00 0.00 0.00 1.40
4037 5751 6.289064 AGATTTCGAACGGCCTCTTATATTT 58.711 36.000 0.00 0.00 0.00 1.40
4038 5752 5.855045 AGATTTCGAACGGCCTCTTATATT 58.145 37.500 0.00 0.00 0.00 1.28
4039 5753 5.244178 AGAGATTTCGAACGGCCTCTTATAT 59.756 40.000 0.00 0.00 0.00 0.86
4040 5754 4.583489 AGAGATTTCGAACGGCCTCTTATA 59.417 41.667 0.00 0.00 0.00 0.98
4041 5755 3.385111 AGAGATTTCGAACGGCCTCTTAT 59.615 43.478 0.00 0.00 0.00 1.73
4042 5756 2.758979 AGAGATTTCGAACGGCCTCTTA 59.241 45.455 0.00 0.00 0.00 2.10
4043 5757 1.550976 AGAGATTTCGAACGGCCTCTT 59.449 47.619 0.00 0.00 0.00 2.85
4044 5758 1.135333 GAGAGATTTCGAACGGCCTCT 59.865 52.381 14.01 14.01 34.11 3.69
4045 5759 1.562017 GAGAGATTTCGAACGGCCTC 58.438 55.000 0.00 2.38 0.00 4.70
4046 5760 0.175989 GGAGAGATTTCGAACGGCCT 59.824 55.000 0.00 0.00 0.00 5.19
4047 5761 1.146358 CGGAGAGATTTCGAACGGCC 61.146 60.000 0.00 0.00 0.00 6.13
4048 5762 1.753468 GCGGAGAGATTTCGAACGGC 61.753 60.000 0.00 0.00 0.00 5.68
4049 5763 0.179134 AGCGGAGAGATTTCGAACGG 60.179 55.000 0.00 0.00 0.00 4.44
4050 5764 1.192793 GAGCGGAGAGATTTCGAACG 58.807 55.000 0.00 0.00 0.00 3.95
4051 5765 1.562017 GGAGCGGAGAGATTTCGAAC 58.438 55.000 0.00 0.00 0.00 3.95
4052 5766 0.100682 CGGAGCGGAGAGATTTCGAA 59.899 55.000 0.00 0.00 0.00 3.71
4053 5767 1.030488 ACGGAGCGGAGAGATTTCGA 61.030 55.000 0.00 0.00 0.00 3.71
4054 5768 0.661552 TACGGAGCGGAGAGATTTCG 59.338 55.000 0.00 0.00 0.00 3.46
4055 5769 2.099427 AGTTACGGAGCGGAGAGATTTC 59.901 50.000 0.00 0.00 0.00 2.17
4056 5770 2.099427 GAGTTACGGAGCGGAGAGATTT 59.901 50.000 0.00 0.00 0.00 2.17
4057 5771 1.677052 GAGTTACGGAGCGGAGAGATT 59.323 52.381 0.00 0.00 0.00 2.40
4058 5772 1.310904 GAGTTACGGAGCGGAGAGAT 58.689 55.000 0.00 0.00 0.00 2.75
4059 5773 0.747283 GGAGTTACGGAGCGGAGAGA 60.747 60.000 0.00 0.00 0.00 3.10
4060 5774 1.728672 GGAGTTACGGAGCGGAGAG 59.271 63.158 0.00 0.00 0.00 3.20
4061 5775 2.110967 CGGAGTTACGGAGCGGAGA 61.111 63.158 0.00 0.00 0.00 3.71
4062 5776 2.408022 CGGAGTTACGGAGCGGAG 59.592 66.667 0.00 0.00 0.00 4.63
4063 5777 3.818787 GCGGAGTTACGGAGCGGA 61.819 66.667 0.00 0.00 0.00 5.54
4064 5778 4.867599 GGCGGAGTTACGGAGCGG 62.868 72.222 0.00 0.00 0.00 5.52
4066 5780 4.125695 ACGGCGGAGTTACGGAGC 62.126 66.667 13.24 0.00 0.00 4.70
4067 5781 2.202570 CACGGCGGAGTTACGGAG 60.203 66.667 13.24 0.00 0.00 4.63
4068 5782 3.751246 CCACGGCGGAGTTACGGA 61.751 66.667 13.24 0.00 36.56 4.69
4069 5783 3.751246 TCCACGGCGGAGTTACGG 61.751 66.667 13.24 0.00 39.64 4.02
4089 5803 2.527951 ATTCCACTGAGTGCCGCTCC 62.528 60.000 7.16 0.00 43.48 4.70
4090 5804 0.674895 AATTCCACTGAGTGCCGCTC 60.675 55.000 7.16 0.00 44.36 5.03
4091 5805 0.250901 AAATTCCACTGAGTGCCGCT 60.251 50.000 7.16 0.00 31.34 5.52
4092 5806 0.598065 AAAATTCCACTGAGTGCCGC 59.402 50.000 7.16 0.00 31.34 6.53
4093 5807 2.933769 GAAAAATTCCACTGAGTGCCG 58.066 47.619 7.16 0.00 31.34 5.69
4105 5819 8.908172 TTCAAACATGCAAAAAGGAAAAATTC 57.092 26.923 0.00 0.00 0.00 2.17
4106 5820 9.518906 GATTCAAACATGCAAAAAGGAAAAATT 57.481 25.926 0.00 0.00 0.00 1.82
4107 5821 8.905850 AGATTCAAACATGCAAAAAGGAAAAAT 58.094 25.926 0.00 0.00 0.00 1.82
4108 5822 8.278729 AGATTCAAACATGCAAAAAGGAAAAA 57.721 26.923 0.00 0.00 0.00 1.94
4109 5823 7.862512 AGATTCAAACATGCAAAAAGGAAAA 57.137 28.000 0.00 0.00 0.00 2.29
4110 5824 7.769970 AGAAGATTCAAACATGCAAAAAGGAAA 59.230 29.630 0.00 0.00 0.00 3.13
4111 5825 7.274447 AGAAGATTCAAACATGCAAAAAGGAA 58.726 30.769 0.00 0.00 0.00 3.36
4112 5826 6.819284 AGAAGATTCAAACATGCAAAAAGGA 58.181 32.000 0.00 0.00 0.00 3.36
4113 5827 6.146673 GGAGAAGATTCAAACATGCAAAAAGG 59.853 38.462 0.00 0.00 0.00 3.11
4114 5828 6.702723 TGGAGAAGATTCAAACATGCAAAAAG 59.297 34.615 0.00 0.00 0.00 2.27
4115 5829 6.479660 GTGGAGAAGATTCAAACATGCAAAAA 59.520 34.615 0.00 0.00 0.00 1.94
4116 5830 5.984926 GTGGAGAAGATTCAAACATGCAAAA 59.015 36.000 0.00 0.00 0.00 2.44
4117 5831 5.531634 GTGGAGAAGATTCAAACATGCAAA 58.468 37.500 0.00 0.00 0.00 3.68
4118 5832 4.320421 CGTGGAGAAGATTCAAACATGCAA 60.320 41.667 0.00 0.00 0.00 4.08
4119 5833 3.189080 CGTGGAGAAGATTCAAACATGCA 59.811 43.478 0.00 0.00 0.00 3.96
4120 5834 3.436704 TCGTGGAGAAGATTCAAACATGC 59.563 43.478 0.00 0.00 0.00 4.06
4121 5835 4.142816 GGTCGTGGAGAAGATTCAAACATG 60.143 45.833 0.00 0.00 0.00 3.21
4122 5836 4.003648 GGTCGTGGAGAAGATTCAAACAT 58.996 43.478 0.00 0.00 0.00 2.71
4123 5837 3.071023 AGGTCGTGGAGAAGATTCAAACA 59.929 43.478 0.00 0.00 0.00 2.83
4124 5838 3.665190 AGGTCGTGGAGAAGATTCAAAC 58.335 45.455 0.00 0.00 0.00 2.93
4125 5839 4.202315 TGAAGGTCGTGGAGAAGATTCAAA 60.202 41.667 0.00 0.00 29.49 2.69
4126 5840 3.323691 TGAAGGTCGTGGAGAAGATTCAA 59.676 43.478 0.00 0.00 29.49 2.69
4127 5841 2.897326 TGAAGGTCGTGGAGAAGATTCA 59.103 45.455 0.00 0.00 0.00 2.57
4128 5842 3.594603 TGAAGGTCGTGGAGAAGATTC 57.405 47.619 0.00 0.00 0.00 2.52
4129 5843 3.557264 GGTTGAAGGTCGTGGAGAAGATT 60.557 47.826 0.00 0.00 0.00 2.40
4130 5844 2.028020 GGTTGAAGGTCGTGGAGAAGAT 60.028 50.000 0.00 0.00 0.00 2.40
4131 5845 1.343465 GGTTGAAGGTCGTGGAGAAGA 59.657 52.381 0.00 0.00 0.00 2.87
4132 5846 1.070134 TGGTTGAAGGTCGTGGAGAAG 59.930 52.381 0.00 0.00 0.00 2.85
4133 5847 1.124780 TGGTTGAAGGTCGTGGAGAA 58.875 50.000 0.00 0.00 0.00 2.87
4134 5848 0.391597 GTGGTTGAAGGTCGTGGAGA 59.608 55.000 0.00 0.00 0.00 3.71
4135 5849 0.944311 CGTGGTTGAAGGTCGTGGAG 60.944 60.000 0.00 0.00 0.00 3.86
4136 5850 1.068417 CGTGGTTGAAGGTCGTGGA 59.932 57.895 0.00 0.00 0.00 4.02
4137 5851 0.531090 TTCGTGGTTGAAGGTCGTGG 60.531 55.000 0.00 0.00 0.00 4.94
4138 5852 2.980562 TTCGTGGTTGAAGGTCGTG 58.019 52.632 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.