Multiple sequence alignment - TraesCS7A01G372900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G372900 chr7A 100.000 3016 0 0 1 3016 546045025 546048040 0.000000e+00 5570.0
1 TraesCS7A01G372900 chr7A 91.694 927 46 15 891 1804 546344100 546343192 0.000000e+00 1256.0
2 TraesCS7A01G372900 chr7A 94.901 353 18 0 1 353 38755439 38755087 1.220000e-153 553.0
3 TraesCS7A01G372900 chr7D 89.125 1554 123 28 356 1875 451041964 451040423 0.000000e+00 1892.0
4 TraesCS7A01G372900 chr7D 92.191 922 48 15 902 1816 449547833 449548737 0.000000e+00 1282.0
5 TraesCS7A01G372900 chr7D 88.053 226 18 5 2248 2471 14554627 14554845 2.980000e-65 259.0
6 TraesCS7A01G372900 chr7D 77.885 208 40 6 490 693 22921664 22921459 1.140000e-24 124.0
7 TraesCS7A01G372900 chr7D 85.000 80 10 1 803 880 449547709 449547788 2.490000e-11 80.5
8 TraesCS7A01G372900 chr7B 92.328 1134 63 14 752 1867 468828363 468827236 0.000000e+00 1591.0
9 TraesCS7A01G372900 chr7B 91.648 910 54 8 922 1819 472784808 472783909 0.000000e+00 1240.0
10 TraesCS7A01G372900 chr7B 92.906 733 38 7 1090 1816 468051030 468051754 0.000000e+00 1053.0
11 TraesCS7A01G372900 chr7B 83.603 433 55 12 2575 2996 586654754 586655181 2.820000e-105 392.0
12 TraesCS7A01G372900 chr7B 87.129 202 12 5 886 1074 468050695 468050895 1.820000e-52 217.0
13 TraesCS7A01G372900 chr7B 88.732 71 6 1 812 880 472784996 472784926 5.360000e-13 86.1
14 TraesCS7A01G372900 chr7B 100.000 31 0 0 1059 1089 468050920 468050950 1.170000e-04 58.4
15 TraesCS7A01G372900 chr5D 79.324 740 104 27 2248 2941 367695242 367694506 9.790000e-130 473.0
16 TraesCS7A01G372900 chr5D 83.790 438 64 5 2574 3008 540828925 540828492 2.800000e-110 409.0
17 TraesCS7A01G372900 chr4D 85.275 455 57 9 2566 3016 134665321 134664873 7.620000e-126 460.0
18 TraesCS7A01G372900 chr6D 84.071 452 60 9 2574 3016 397261821 397261373 2.780000e-115 425.0
19 TraesCS7A01G372900 chr6D 84.507 284 28 8 2246 2519 324812977 324813254 1.780000e-67 267.0
20 TraesCS7A01G372900 chr6D 86.555 119 16 0 1597 1715 69307085 69306967 6.780000e-27 132.0
21 TraesCS7A01G372900 chr3B 81.767 532 76 16 2489 3007 607819206 607818683 2.780000e-115 425.0
22 TraesCS7A01G372900 chr3B 83.151 457 64 10 2567 3016 741576157 741575707 3.620000e-109 405.0
23 TraesCS7A01G372900 chr3B 85.434 357 50 2 1 356 741369396 741369041 1.320000e-98 370.0
24 TraesCS7A01G372900 chr2D 83.478 460 62 11 2567 3016 432764993 432765448 1.670000e-112 416.0
25 TraesCS7A01G372900 chr2D 83.333 456 66 9 2568 3016 556234102 556233650 2.160000e-111 412.0
26 TraesCS7A01G372900 chr3A 83.036 448 67 7 2574 3016 22849053 22849496 6.060000e-107 398.0
27 TraesCS7A01G372900 chr3A 75.802 748 121 21 2250 2942 690215488 690214746 1.040000e-84 324.0
28 TraesCS7A01G372900 chr3A 86.325 234 25 6 2250 2481 158163964 158164192 6.460000e-62 248.0
29 TraesCS7A01G372900 chrUn 80.513 390 51 17 2250 2625 35731283 35731661 2.960000e-70 276.0
30 TraesCS7A01G372900 chrUn 80.513 390 51 17 2250 2625 242151028 242150650 2.960000e-70 276.0
31 TraesCS7A01G372900 chr5A 83.165 297 46 4 59 353 46251000 46251294 4.960000e-68 268.0
32 TraesCS7A01G372900 chr3D 86.498 237 24 7 2250 2481 596658081 596657848 1.390000e-63 254.0
33 TraesCS7A01G372900 chr1D 82.253 293 38 13 2250 2534 217293843 217293557 1.080000e-59 241.0
34 TraesCS7A01G372900 chr1D 82.836 134 18 5 2488 2616 231010043 231010176 6.830000e-22 115.0
35 TraesCS7A01G372900 chr6A 88.235 119 14 0 1597 1715 87540098 87539980 3.130000e-30 143.0
36 TraesCS7A01G372900 chr6B 87.179 117 15 0 1597 1713 144418611 144418495 1.890000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G372900 chr7A 546045025 546048040 3015 False 5570.00 5570 100.0000 1 3016 1 chr7A.!!$F1 3015
1 TraesCS7A01G372900 chr7A 546343192 546344100 908 True 1256.00 1256 91.6940 891 1804 1 chr7A.!!$R2 913
2 TraesCS7A01G372900 chr7D 451040423 451041964 1541 True 1892.00 1892 89.1250 356 1875 1 chr7D.!!$R2 1519
3 TraesCS7A01G372900 chr7D 449547709 449548737 1028 False 681.25 1282 88.5955 803 1816 2 chr7D.!!$F2 1013
4 TraesCS7A01G372900 chr7B 468827236 468828363 1127 True 1591.00 1591 92.3280 752 1867 1 chr7B.!!$R1 1115
5 TraesCS7A01G372900 chr7B 472783909 472784996 1087 True 663.05 1240 90.1900 812 1819 2 chr7B.!!$R2 1007
6 TraesCS7A01G372900 chr7B 468050695 468051754 1059 False 442.80 1053 93.3450 886 1816 3 chr7B.!!$F2 930
7 TraesCS7A01G372900 chr5D 367694506 367695242 736 True 473.00 473 79.3240 2248 2941 1 chr5D.!!$R1 693
8 TraesCS7A01G372900 chr3B 607818683 607819206 523 True 425.00 425 81.7670 2489 3007 1 chr3B.!!$R1 518
9 TraesCS7A01G372900 chr3A 690214746 690215488 742 True 324.00 324 75.8020 2250 2942 1 chr3A.!!$R1 692


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
267 268 0.029567 CGATACCTGTCAGACGAGCC 59.970 60.0 0.0 0.0 0.00 4.70 F
1907 2161 0.039165 GGCTGCGTGCTTAGCTTTTT 60.039 50.0 5.6 0.0 42.39 1.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1951 2205 0.033601 AAAGCAACAGGACCACCACA 60.034 50.000 0.0 0.0 38.94 4.17 R
2858 3172 1.153958 GCAAAACTGGGCATCTCGC 60.154 57.895 0.0 0.0 41.28 5.03 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.428282 GGTTCGGCCGTCGCATTT 61.428 61.111 27.15 0.00 39.05 2.32
22 23 2.101835 GGTTCGGCCGTCGCATTTA 61.102 57.895 27.15 0.00 39.05 1.40
23 24 1.059838 GTTCGGCCGTCGCATTTAC 59.940 57.895 27.15 7.72 39.05 2.01
24 25 1.079681 TTCGGCCGTCGCATTTACT 60.080 52.632 27.15 0.00 39.05 2.24
25 26 1.079875 TTCGGCCGTCGCATTTACTC 61.080 55.000 27.15 0.00 39.05 2.59
26 27 2.522638 CGGCCGTCGCATTTACTCC 61.523 63.158 19.50 0.00 36.38 3.85
27 28 2.522638 GGCCGTCGCATTTACTCCG 61.523 63.158 0.00 0.00 36.38 4.63
28 29 2.522638 GCCGTCGCATTTACTCCGG 61.523 63.158 0.00 0.00 38.45 5.14
29 30 1.153706 CCGTCGCATTTACTCCGGT 60.154 57.895 0.00 0.00 0.00 5.28
30 31 1.143969 CCGTCGCATTTACTCCGGTC 61.144 60.000 0.00 0.00 0.00 4.79
31 32 1.143969 CGTCGCATTTACTCCGGTCC 61.144 60.000 0.00 0.00 0.00 4.46
32 33 0.808847 GTCGCATTTACTCCGGTCCC 60.809 60.000 0.00 0.00 0.00 4.46
33 34 1.523032 CGCATTTACTCCGGTCCCC 60.523 63.158 0.00 0.00 0.00 4.81
50 51 2.257371 CGAACGCGGAGGACAGAA 59.743 61.111 12.47 0.00 0.00 3.02
51 52 2.087009 CGAACGCGGAGGACAGAAC 61.087 63.158 12.47 0.00 0.00 3.01
52 53 2.049433 AACGCGGAGGACAGAACG 60.049 61.111 12.47 0.00 0.00 3.95
55 56 4.373116 GCGGAGGACAGAACGCCA 62.373 66.667 0.00 0.00 45.70 5.69
56 57 2.579201 CGGAGGACAGAACGCCAT 59.421 61.111 0.00 0.00 0.00 4.40
57 58 1.813859 CGGAGGACAGAACGCCATA 59.186 57.895 0.00 0.00 0.00 2.74
58 59 0.527817 CGGAGGACAGAACGCCATAC 60.528 60.000 0.00 0.00 0.00 2.39
71 72 2.954868 CATACGTGGAGCGACGGC 60.955 66.667 9.68 0.00 43.84 5.68
82 83 4.838486 CGACGGCTCAGCGTCTCC 62.838 72.222 16.23 0.00 32.91 3.71
83 84 4.838486 GACGGCTCAGCGTCTCCG 62.838 72.222 12.60 8.54 46.61 4.63
94 95 4.477975 GTCTCCGCCGACGACCTG 62.478 72.222 0.00 0.00 43.93 4.00
95 96 4.710167 TCTCCGCCGACGACCTGA 62.710 66.667 0.00 0.00 43.93 3.86
96 97 4.180946 CTCCGCCGACGACCTGAG 62.181 72.222 0.00 0.00 43.93 3.35
99 100 4.838486 CGCCGACGACCTGAGCTC 62.838 72.222 6.82 6.82 43.93 4.09
100 101 4.500116 GCCGACGACCTGAGCTCC 62.500 72.222 12.15 0.00 0.00 4.70
101 102 2.752238 CCGACGACCTGAGCTCCT 60.752 66.667 12.15 0.00 0.00 3.69
102 103 2.344203 CCGACGACCTGAGCTCCTT 61.344 63.158 12.15 0.00 0.00 3.36
103 104 1.030488 CCGACGACCTGAGCTCCTTA 61.030 60.000 12.15 0.00 0.00 2.69
104 105 1.025812 CGACGACCTGAGCTCCTTAT 58.974 55.000 12.15 0.00 0.00 1.73
105 106 1.002251 CGACGACCTGAGCTCCTTATC 60.002 57.143 12.15 2.85 0.00 1.75
106 107 2.303175 GACGACCTGAGCTCCTTATCT 58.697 52.381 12.15 0.00 0.00 1.98
107 108 2.028130 ACGACCTGAGCTCCTTATCTG 58.972 52.381 12.15 0.00 0.00 2.90
108 109 2.302260 CGACCTGAGCTCCTTATCTGA 58.698 52.381 12.15 0.00 0.00 3.27
109 110 2.890311 CGACCTGAGCTCCTTATCTGAT 59.110 50.000 12.15 0.00 0.00 2.90
110 111 3.057596 CGACCTGAGCTCCTTATCTGATC 60.058 52.174 12.15 0.00 0.00 2.92
111 112 3.238597 ACCTGAGCTCCTTATCTGATCC 58.761 50.000 12.15 0.00 0.00 3.36
112 113 3.116784 ACCTGAGCTCCTTATCTGATCCT 60.117 47.826 12.15 0.00 0.00 3.24
113 114 4.107149 ACCTGAGCTCCTTATCTGATCCTA 59.893 45.833 12.15 0.00 0.00 2.94
114 115 4.706476 CCTGAGCTCCTTATCTGATCCTAG 59.294 50.000 12.15 0.00 0.00 3.02
115 116 4.671831 TGAGCTCCTTATCTGATCCTAGG 58.328 47.826 12.15 0.82 0.00 3.02
116 117 3.440127 AGCTCCTTATCTGATCCTAGGC 58.560 50.000 2.96 0.00 0.00 3.93
117 118 2.499693 GCTCCTTATCTGATCCTAGGCC 59.500 54.545 2.96 0.00 0.00 5.19
118 119 3.103742 CTCCTTATCTGATCCTAGGCCC 58.896 54.545 2.96 0.00 0.00 5.80
119 120 2.454772 TCCTTATCTGATCCTAGGCCCA 59.545 50.000 2.96 3.25 0.00 5.36
120 121 2.569404 CCTTATCTGATCCTAGGCCCAC 59.431 54.545 2.96 0.00 0.00 4.61
121 122 2.327325 TATCTGATCCTAGGCCCACC 57.673 55.000 2.96 0.00 0.00 4.61
122 123 0.474660 ATCTGATCCTAGGCCCACCC 60.475 60.000 2.96 0.00 36.11 4.61
123 124 1.384502 CTGATCCTAGGCCCACCCA 60.385 63.158 2.96 0.00 36.11 4.51
124 125 0.769776 CTGATCCTAGGCCCACCCAT 60.770 60.000 2.96 0.00 36.11 4.00
125 126 0.570727 TGATCCTAGGCCCACCCATA 59.429 55.000 2.96 0.00 36.11 2.74
126 127 1.154216 TGATCCTAGGCCCACCCATAT 59.846 52.381 2.96 0.00 36.11 1.78
127 128 1.561542 GATCCTAGGCCCACCCATATG 59.438 57.143 2.96 0.00 36.11 1.78
128 129 0.475632 TCCTAGGCCCACCCATATGG 60.476 60.000 15.41 15.41 39.71 2.74
139 140 1.953559 CCCATATGGTCAACGTCCTG 58.046 55.000 20.46 0.00 0.00 3.86
140 141 1.475034 CCCATATGGTCAACGTCCTGG 60.475 57.143 20.46 0.00 0.00 4.45
141 142 1.209504 CCATATGGTCAACGTCCTGGT 59.790 52.381 14.09 0.00 0.00 4.00
142 143 2.550978 CATATGGTCAACGTCCTGGTC 58.449 52.381 0.00 0.00 0.00 4.02
143 144 0.899720 TATGGTCAACGTCCTGGTCC 59.100 55.000 0.00 0.00 0.00 4.46
144 145 1.125093 ATGGTCAACGTCCTGGTCCA 61.125 55.000 0.00 0.00 0.00 4.02
145 146 1.125093 TGGTCAACGTCCTGGTCCAT 61.125 55.000 0.00 0.00 0.00 3.41
146 147 0.673644 GGTCAACGTCCTGGTCCATG 60.674 60.000 0.00 0.00 0.00 3.66
147 148 0.673644 GTCAACGTCCTGGTCCATGG 60.674 60.000 4.97 4.97 0.00 3.66
148 149 0.834261 TCAACGTCCTGGTCCATGGA 60.834 55.000 11.44 11.44 0.00 3.41
149 150 0.673644 CAACGTCCTGGTCCATGGAC 60.674 60.000 33.14 33.14 46.69 4.02
157 158 2.584608 GTCCATGGACCACCTCGG 59.415 66.667 31.37 0.00 39.08 4.63
158 159 3.399181 TCCATGGACCACCTCGGC 61.399 66.667 11.44 0.00 39.03 5.54
159 160 4.489771 CCATGGACCACCTCGGCC 62.490 72.222 5.56 0.00 39.03 6.13
160 161 4.489771 CATGGACCACCTCGGCCC 62.490 72.222 0.00 0.00 37.96 5.80
175 176 3.459063 CCCCGTCCTCCTTCCGTC 61.459 72.222 0.00 0.00 0.00 4.79
176 177 3.459063 CCCGTCCTCCTTCCGTCC 61.459 72.222 0.00 0.00 0.00 4.79
177 178 3.823330 CCGTCCTCCTTCCGTCCG 61.823 72.222 0.00 0.00 0.00 4.79
178 179 2.749044 CGTCCTCCTTCCGTCCGA 60.749 66.667 0.00 0.00 0.00 4.55
179 180 2.883621 GTCCTCCTTCCGTCCGAC 59.116 66.667 0.00 0.00 0.00 4.79
180 181 2.362120 TCCTCCTTCCGTCCGACC 60.362 66.667 0.00 0.00 0.00 4.79
181 182 3.459063 CCTCCTTCCGTCCGACCC 61.459 72.222 0.00 0.00 0.00 4.46
182 183 3.459063 CTCCTTCCGTCCGACCCC 61.459 72.222 0.00 0.00 0.00 4.95
185 186 4.125695 CTTCCGTCCGACCCCGTC 62.126 72.222 0.00 0.00 0.00 4.79
199 200 4.487412 CGTCGCTACGGACCCACC 62.487 72.222 2.28 0.00 45.50 4.61
200 201 3.376078 GTCGCTACGGACCCACCA 61.376 66.667 0.00 0.00 38.90 4.17
201 202 2.601067 TCGCTACGGACCCACCAA 60.601 61.111 0.00 0.00 38.90 3.67
202 203 2.433664 CGCTACGGACCCACCAAC 60.434 66.667 0.00 0.00 38.90 3.77
203 204 2.939261 CGCTACGGACCCACCAACT 61.939 63.158 0.00 0.00 38.90 3.16
204 205 1.079336 GCTACGGACCCACCAACTC 60.079 63.158 0.00 0.00 38.90 3.01
205 206 1.214589 CTACGGACCCACCAACTCG 59.785 63.158 0.00 0.00 38.90 4.18
206 207 2.830704 CTACGGACCCACCAACTCGC 62.831 65.000 0.00 0.00 38.90 5.03
208 209 3.948719 GGACCCACCAACTCGCCA 61.949 66.667 0.00 0.00 38.79 5.69
209 210 2.668550 GACCCACCAACTCGCCAC 60.669 66.667 0.00 0.00 0.00 5.01
210 211 3.168528 ACCCACCAACTCGCCACT 61.169 61.111 0.00 0.00 0.00 4.00
211 212 2.669569 CCCACCAACTCGCCACTG 60.670 66.667 0.00 0.00 0.00 3.66
212 213 2.111043 CCACCAACTCGCCACTGT 59.889 61.111 0.00 0.00 0.00 3.55
213 214 1.525995 CCACCAACTCGCCACTGTT 60.526 57.895 0.00 0.00 0.00 3.16
214 215 1.101049 CCACCAACTCGCCACTGTTT 61.101 55.000 0.00 0.00 0.00 2.83
215 216 0.307760 CACCAACTCGCCACTGTTTC 59.692 55.000 0.00 0.00 0.00 2.78
216 217 1.157870 ACCAACTCGCCACTGTTTCG 61.158 55.000 0.00 0.00 0.00 3.46
217 218 1.157870 CCAACTCGCCACTGTTTCGT 61.158 55.000 0.00 0.00 0.00 3.85
218 219 1.493772 CAACTCGCCACTGTTTCGTA 58.506 50.000 0.00 0.00 0.00 3.43
219 220 1.191647 CAACTCGCCACTGTTTCGTAC 59.808 52.381 0.00 0.00 0.00 3.67
220 221 0.319297 ACTCGCCACTGTTTCGTACC 60.319 55.000 0.00 0.00 0.00 3.34
221 222 1.342082 CTCGCCACTGTTTCGTACCG 61.342 60.000 0.00 0.00 0.00 4.02
222 223 1.662446 CGCCACTGTTTCGTACCGT 60.662 57.895 0.00 0.00 0.00 4.83
223 224 0.387112 CGCCACTGTTTCGTACCGTA 60.387 55.000 0.00 0.00 0.00 4.02
224 225 1.733389 CGCCACTGTTTCGTACCGTAT 60.733 52.381 0.00 0.00 0.00 3.06
225 226 2.340337 GCCACTGTTTCGTACCGTATT 58.660 47.619 0.00 0.00 0.00 1.89
226 227 2.346545 GCCACTGTTTCGTACCGTATTC 59.653 50.000 0.00 0.00 0.00 1.75
227 228 2.925563 CCACTGTTTCGTACCGTATTCC 59.074 50.000 0.00 0.00 0.00 3.01
228 229 2.595536 CACTGTTTCGTACCGTATTCCG 59.404 50.000 0.00 0.00 0.00 4.30
229 230 1.585214 CTGTTTCGTACCGTATTCCGC 59.415 52.381 0.00 0.00 34.38 5.54
230 231 0.567509 GTTTCGTACCGTATTCCGCG 59.432 55.000 0.00 0.00 34.38 6.46
236 237 2.278726 CCGTATTCCGCGGCGTAA 60.279 61.111 23.51 12.80 42.82 3.18
237 238 1.662446 CCGTATTCCGCGGCGTAAT 60.662 57.895 23.51 19.37 42.82 1.89
238 239 1.611592 CCGTATTCCGCGGCGTAATC 61.612 60.000 23.51 10.15 42.82 1.75
239 240 1.611592 CGTATTCCGCGGCGTAATCC 61.612 60.000 23.51 7.42 0.00 3.01
240 241 0.319297 GTATTCCGCGGCGTAATCCT 60.319 55.000 23.51 0.00 0.00 3.24
241 242 0.390124 TATTCCGCGGCGTAATCCTT 59.610 50.000 23.51 0.00 0.00 3.36
242 243 0.463116 ATTCCGCGGCGTAATCCTTT 60.463 50.000 23.51 0.00 0.00 3.11
243 244 0.674269 TTCCGCGGCGTAATCCTTTT 60.674 50.000 23.51 0.00 0.00 2.27
244 245 1.085501 TCCGCGGCGTAATCCTTTTC 61.086 55.000 23.51 0.00 0.00 2.29
245 246 1.087771 CCGCGGCGTAATCCTTTTCT 61.088 55.000 22.00 0.00 0.00 2.52
246 247 0.300789 CGCGGCGTAATCCTTTTCTC 59.699 55.000 15.36 0.00 0.00 2.87
247 248 1.653151 GCGGCGTAATCCTTTTCTCT 58.347 50.000 9.37 0.00 0.00 3.10
248 249 1.593469 GCGGCGTAATCCTTTTCTCTC 59.407 52.381 9.37 0.00 0.00 3.20
249 250 1.852895 CGGCGTAATCCTTTTCTCTCG 59.147 52.381 0.00 0.00 0.00 4.04
250 251 2.479049 CGGCGTAATCCTTTTCTCTCGA 60.479 50.000 0.00 0.00 0.00 4.04
251 252 3.718815 GGCGTAATCCTTTTCTCTCGAT 58.281 45.455 0.00 0.00 0.00 3.59
252 253 4.556104 CGGCGTAATCCTTTTCTCTCGATA 60.556 45.833 0.00 0.00 0.00 2.92
253 254 4.680567 GGCGTAATCCTTTTCTCTCGATAC 59.319 45.833 0.00 0.00 0.00 2.24
254 255 4.680567 GCGTAATCCTTTTCTCTCGATACC 59.319 45.833 0.00 0.00 0.00 2.73
255 256 5.507650 GCGTAATCCTTTTCTCTCGATACCT 60.508 44.000 0.00 0.00 0.00 3.08
256 257 5.915758 CGTAATCCTTTTCTCTCGATACCTG 59.084 44.000 0.00 0.00 0.00 4.00
257 258 5.941555 AATCCTTTTCTCTCGATACCTGT 57.058 39.130 0.00 0.00 0.00 4.00
258 259 4.985538 TCCTTTTCTCTCGATACCTGTC 57.014 45.455 0.00 0.00 0.00 3.51
259 260 4.341487 TCCTTTTCTCTCGATACCTGTCA 58.659 43.478 0.00 0.00 0.00 3.58
260 261 4.399618 TCCTTTTCTCTCGATACCTGTCAG 59.600 45.833 0.00 0.00 0.00 3.51
261 262 4.399618 CCTTTTCTCTCGATACCTGTCAGA 59.600 45.833 0.00 0.00 0.00 3.27
262 263 4.966965 TTTCTCTCGATACCTGTCAGAC 57.033 45.455 0.00 0.00 0.00 3.51
263 264 2.552031 TCTCTCGATACCTGTCAGACG 58.448 52.381 0.00 2.28 0.00 4.18
264 265 2.167900 TCTCTCGATACCTGTCAGACGA 59.832 50.000 0.00 6.36 0.00 4.20
265 266 2.542178 CTCTCGATACCTGTCAGACGAG 59.458 54.545 21.04 21.04 45.20 4.18
266 267 1.003331 CTCGATACCTGTCAGACGAGC 60.003 57.143 17.92 1.63 40.03 5.03
267 268 0.029567 CGATACCTGTCAGACGAGCC 59.970 60.000 0.00 0.00 0.00 4.70
268 269 1.103803 GATACCTGTCAGACGAGCCA 58.896 55.000 0.00 0.00 0.00 4.75
269 270 1.066303 GATACCTGTCAGACGAGCCAG 59.934 57.143 0.00 0.00 0.00 4.85
270 271 1.595993 TACCTGTCAGACGAGCCAGC 61.596 60.000 0.00 0.00 0.00 4.85
271 272 2.505777 CTGTCAGACGAGCCAGCG 60.506 66.667 0.00 0.00 37.29 5.18
272 273 3.978723 CTGTCAGACGAGCCAGCGG 62.979 68.421 0.00 0.00 35.12 5.52
284 285 3.402186 CCAGCGGCATTATTCCTCA 57.598 52.632 1.45 0.00 0.00 3.86
285 286 1.901591 CCAGCGGCATTATTCCTCAT 58.098 50.000 1.45 0.00 0.00 2.90
286 287 1.808945 CCAGCGGCATTATTCCTCATC 59.191 52.381 1.45 0.00 0.00 2.92
287 288 1.808945 CAGCGGCATTATTCCTCATCC 59.191 52.381 1.45 0.00 0.00 3.51
288 289 1.168714 GCGGCATTATTCCTCATCCC 58.831 55.000 0.00 0.00 0.00 3.85
289 290 1.545428 GCGGCATTATTCCTCATCCCA 60.545 52.381 0.00 0.00 0.00 4.37
290 291 2.862541 CGGCATTATTCCTCATCCCAA 58.137 47.619 0.00 0.00 0.00 4.12
291 292 3.221771 CGGCATTATTCCTCATCCCAAA 58.778 45.455 0.00 0.00 0.00 3.28
292 293 3.828451 CGGCATTATTCCTCATCCCAAAT 59.172 43.478 0.00 0.00 0.00 2.32
293 294 4.082571 CGGCATTATTCCTCATCCCAAATC 60.083 45.833 0.00 0.00 0.00 2.17
294 295 4.834496 GGCATTATTCCTCATCCCAAATCA 59.166 41.667 0.00 0.00 0.00 2.57
295 296 5.279156 GGCATTATTCCTCATCCCAAATCAC 60.279 44.000 0.00 0.00 0.00 3.06
296 297 5.563475 GCATTATTCCTCATCCCAAATCACG 60.563 44.000 0.00 0.00 0.00 4.35
297 298 2.418368 TTCCTCATCCCAAATCACGG 57.582 50.000 0.00 0.00 0.00 4.94
298 299 1.578897 TCCTCATCCCAAATCACGGA 58.421 50.000 0.00 0.00 0.00 4.69
299 300 1.209504 TCCTCATCCCAAATCACGGAC 59.790 52.381 0.00 0.00 0.00 4.79
300 301 1.290203 CTCATCCCAAATCACGGACG 58.710 55.000 0.00 0.00 0.00 4.79
301 302 0.107897 TCATCCCAAATCACGGACGG 60.108 55.000 0.00 0.00 0.00 4.79
302 303 1.095228 CATCCCAAATCACGGACGGG 61.095 60.000 0.00 0.00 38.34 5.28
303 304 2.886730 ATCCCAAATCACGGACGGGC 62.887 60.000 0.00 0.00 36.79 6.13
304 305 3.131478 CCAAATCACGGACGGGCC 61.131 66.667 0.00 0.00 0.00 5.80
318 319 3.617538 GGCCGTCGCGATTTCGAG 61.618 66.667 14.06 6.89 43.02 4.04
319 320 4.267013 GCCGTCGCGATTTCGAGC 62.267 66.667 14.06 13.02 43.02 5.03
327 328 1.561730 CGATTTCGAGCGCAGATGG 59.438 57.895 11.47 0.00 43.02 3.51
328 329 1.825285 CGATTTCGAGCGCAGATGGG 61.825 60.000 11.47 0.00 43.02 4.00
391 392 9.492973 AAAACAAATTCCATCTTACTTGATTGG 57.507 29.630 0.00 0.00 0.00 3.16
438 440 6.158598 ACAAATATCTTGCTTGCGAAAACAT 58.841 32.000 0.00 0.00 0.00 2.71
444 446 2.741612 TGCTTGCGAAAACATGAAAGG 58.258 42.857 0.00 0.00 0.00 3.11
467 470 6.013466 AGGTTTAAAAAGATTGGATGCCACAT 60.013 34.615 0.00 0.00 30.78 3.21
468 471 7.180051 AGGTTTAAAAAGATTGGATGCCACATA 59.820 33.333 0.00 0.00 30.78 2.29
473 476 6.645790 AAAGATTGGATGCCACATAGAATC 57.354 37.500 0.00 0.00 30.78 2.52
478 481 3.895041 TGGATGCCACATAGAATCGACTA 59.105 43.478 0.00 0.00 0.00 2.59
482 485 6.292919 GGATGCCACATAGAATCGACTAAAAC 60.293 42.308 0.00 0.00 0.00 2.43
510 513 5.123227 ACCCAAATGATAAGTGTCATACGG 58.877 41.667 0.00 0.00 37.85 4.02
511 514 5.123227 CCCAAATGATAAGTGTCATACGGT 58.877 41.667 0.00 0.00 37.85 4.83
512 515 5.007626 CCCAAATGATAAGTGTCATACGGTG 59.992 44.000 0.00 0.00 37.85 4.94
522 526 0.455464 TCATACGGTGACACGAAGCG 60.455 55.000 0.00 0.00 43.79 4.68
526 530 2.049063 GGTGACACGAAGCGCTCT 60.049 61.111 12.06 0.00 0.00 4.09
527 531 1.211969 GGTGACACGAAGCGCTCTA 59.788 57.895 12.06 0.00 0.00 2.43
528 532 0.798771 GGTGACACGAAGCGCTCTAG 60.799 60.000 12.06 7.88 0.00 2.43
530 534 1.874466 GACACGAAGCGCTCTAGCC 60.874 63.158 12.06 0.00 37.91 3.93
531 535 2.583593 CACGAAGCGCTCTAGCCC 60.584 66.667 12.06 0.00 37.91 5.19
533 537 2.279120 CGAAGCGCTCTAGCCCTG 60.279 66.667 12.06 0.00 37.91 4.45
534 538 2.107953 GAAGCGCTCTAGCCCTGG 59.892 66.667 12.06 0.00 37.91 4.45
535 539 4.168291 AAGCGCTCTAGCCCTGGC 62.168 66.667 12.06 0.00 42.33 4.85
568 572 6.145048 ACGACTAAAGTTGTCATACGAAAAGG 59.855 38.462 0.00 0.00 38.19 3.11
569 573 6.364165 CGACTAAAGTTGTCATACGAAAAGGA 59.636 38.462 0.00 0.00 34.37 3.36
578 582 8.813282 GTTGTCATACGAAAAGGAAAAACAAAT 58.187 29.630 0.00 0.00 0.00 2.32
586 592 7.175119 ACGAAAAGGAAAAACAAATCCCAAAAA 59.825 29.630 0.00 0.00 36.31 1.94
587 593 7.696035 CGAAAAGGAAAAACAAATCCCAAAAAG 59.304 33.333 0.00 0.00 36.31 2.27
597 603 6.883744 ACAAATCCCAAAAAGCTGAAACTTA 58.116 32.000 0.00 0.00 0.00 2.24
603 609 6.054941 CCCAAAAAGCTGAAACTTACCATTT 58.945 36.000 0.00 0.00 0.00 2.32
604 610 6.202762 CCCAAAAAGCTGAAACTTACCATTTC 59.797 38.462 0.00 0.00 36.73 2.17
605 611 6.074356 CCAAAAAGCTGAAACTTACCATTTCG 60.074 38.462 0.00 0.00 38.64 3.46
610 616 6.438763 AGCTGAAACTTACCATTTCGAAAAG 58.561 36.000 15.66 10.61 38.64 2.27
640 646 7.129109 TGCTATACTTGACAACTAAAACTGC 57.871 36.000 0.00 0.00 0.00 4.40
646 652 3.153919 TGACAACTAAAACTGCCATCCC 58.846 45.455 0.00 0.00 0.00 3.85
647 653 3.181434 TGACAACTAAAACTGCCATCCCT 60.181 43.478 0.00 0.00 0.00 4.20
648 654 3.157087 ACAACTAAAACTGCCATCCCTG 58.843 45.455 0.00 0.00 0.00 4.45
649 655 3.157087 CAACTAAAACTGCCATCCCTGT 58.843 45.455 0.00 0.00 0.00 4.00
650 656 2.795329 ACTAAAACTGCCATCCCTGTG 58.205 47.619 0.00 0.00 0.00 3.66
652 658 2.086610 AAAACTGCCATCCCTGTGTT 57.913 45.000 0.00 0.00 0.00 3.32
661 667 4.532916 TGCCATCCCTGTGTTACTAAACTA 59.467 41.667 0.00 0.00 36.51 2.24
663 669 5.116882 CCATCCCTGTGTTACTAAACTAGC 58.883 45.833 0.00 0.00 36.51 3.42
664 670 5.338056 CCATCCCTGTGTTACTAAACTAGCA 60.338 44.000 0.00 0.00 36.51 3.49
665 671 6.349300 CATCCCTGTGTTACTAAACTAGCAT 58.651 40.000 0.00 0.00 36.51 3.79
666 672 7.418597 CCATCCCTGTGTTACTAAACTAGCATA 60.419 40.741 0.00 0.00 36.51 3.14
690 696 5.710613 AAAACGTTTAAAGTTGCCATGTG 57.289 34.783 15.03 0.00 31.43 3.21
693 699 4.749976 ACGTTTAAAGTTGCCATGTGTTT 58.250 34.783 0.00 0.00 0.00 2.83
712 727 5.752955 GTGTTTGTGTGGCATTTATCAAGTT 59.247 36.000 0.00 0.00 0.00 2.66
714 729 6.920758 TGTTTGTGTGGCATTTATCAAGTTAC 59.079 34.615 0.00 0.00 0.00 2.50
725 740 3.721087 ATCAAGTTACCAGGGTCCAAG 57.279 47.619 0.00 0.00 0.00 3.61
728 743 3.203487 TCAAGTTACCAGGGTCCAAGTTT 59.797 43.478 0.00 0.00 0.00 2.66
729 744 3.223674 AGTTACCAGGGTCCAAGTTTG 57.776 47.619 0.00 0.00 0.00 2.93
741 756 7.007723 AGGGTCCAAGTTTGAAAACATGTATA 58.992 34.615 0.00 0.00 41.30 1.47
788 808 2.034675 CGTGCGCATGCCAAATATTTTC 60.035 45.455 18.03 0.00 41.78 2.29
791 811 4.093261 GTGCGCATGCCAAATATTTTCTTT 59.907 37.500 15.91 0.00 41.78 2.52
792 812 4.694509 TGCGCATGCCAAATATTTTCTTTT 59.305 33.333 13.15 0.00 41.78 2.27
794 814 5.163874 GCGCATGCCAAATATTTTCTTTTGA 60.164 36.000 13.15 0.00 35.34 2.69
795 815 6.471839 CGCATGCCAAATATTTTCTTTTGAG 58.528 36.000 13.15 0.00 35.34 3.02
796 816 6.253013 GCATGCCAAATATTTTCTTTTGAGC 58.747 36.000 6.36 0.00 35.34 4.26
798 818 7.573469 GCATGCCAAATATTTTCTTTTGAGCAA 60.573 33.333 6.36 0.00 39.78 3.91
799 819 7.798596 TGCCAAATATTTTCTTTTGAGCAAA 57.201 28.000 0.00 0.00 36.74 3.68
800 820 7.638134 TGCCAAATATTTTCTTTTGAGCAAAC 58.362 30.769 0.00 0.00 36.74 2.93
817 837 4.812476 CGCGCCCGTCATCTGGAA 62.812 66.667 0.00 0.00 0.00 3.53
822 844 1.305930 GCCCGTCATCTGGAAACCAC 61.306 60.000 0.00 0.00 0.00 4.16
862 884 5.331902 CAACACCGTAATTTTCTATGCTGG 58.668 41.667 0.00 0.00 0.00 4.85
880 902 2.809601 CGTACGTGAGGCAGCCAC 60.810 66.667 15.80 8.35 0.00 5.01
881 903 2.434359 GTACGTGAGGCAGCCACC 60.434 66.667 15.80 5.47 0.00 4.61
883 905 2.942796 TACGTGAGGCAGCCACCAG 61.943 63.158 15.80 6.67 0.00 4.00
884 906 4.320456 CGTGAGGCAGCCACCAGT 62.320 66.667 15.80 0.00 0.00 4.00
994 1095 1.521423 CGCTAAATCCTTAAGCCGACG 59.479 52.381 0.00 0.00 0.00 5.12
1129 1377 1.342496 TGGTCTCTGCACTCAACTCAG 59.658 52.381 0.00 0.00 0.00 3.35
1130 1378 1.427435 GTCTCTGCACTCAACTCAGC 58.573 55.000 0.00 0.00 0.00 4.26
1131 1379 1.000731 GTCTCTGCACTCAACTCAGCT 59.999 52.381 0.00 0.00 0.00 4.24
1132 1380 1.271934 TCTCTGCACTCAACTCAGCTC 59.728 52.381 0.00 0.00 0.00 4.09
1133 1381 1.000618 CTCTGCACTCAACTCAGCTCA 59.999 52.381 0.00 0.00 0.00 4.26
1147 1395 0.249531 AGCTCAGCTCATCATGCTCG 60.250 55.000 0.00 0.00 38.92 5.03
1353 1607 3.062466 CTGCTGGTCGTCCTCGGA 61.062 66.667 0.00 0.00 37.69 4.55
1377 1631 2.124570 GCGCCCAGGACATCATGT 60.125 61.111 0.00 0.00 0.00 3.21
1383 1637 2.947243 GCCCAGGACATCATGTGTTCAT 60.947 50.000 0.00 0.00 42.36 2.57
1434 1688 1.934220 TTGCTCTCACGGCTAGGTCG 61.934 60.000 0.00 0.00 36.42 4.79
1804 2058 5.449451 CCACCGGTGTAGTTATATTTTTGCC 60.449 44.000 31.80 0.00 0.00 4.52
1831 2085 0.941542 TTGCACGTACAAGTTGAGCC 59.058 50.000 10.54 0.00 0.00 4.70
1845 2099 7.368833 ACAAGTTGAGCCGAGTGTATATATAC 58.631 38.462 14.86 14.86 0.00 1.47
1848 2102 7.818642 AGTTGAGCCGAGTGTATATATACTTC 58.181 38.462 20.80 16.71 34.41 3.01
1869 2123 4.380531 TCAGCTATATGTAAGTTGCCTGC 58.619 43.478 0.00 0.00 0.00 4.85
1872 2126 5.240183 CAGCTATATGTAAGTTGCCTGCAAT 59.760 40.000 7.94 0.00 38.28 3.56
1875 2129 7.502226 AGCTATATGTAAGTTGCCTGCAATTTA 59.498 33.333 13.67 13.67 37.17 1.40
1876 2130 8.299570 GCTATATGTAAGTTGCCTGCAATTTAT 58.700 33.333 18.64 10.37 39.24 1.40
1880 2134 8.876275 ATGTAAGTTGCCTGCAATTTATAATG 57.124 30.769 18.64 0.00 39.24 1.90
1881 2135 6.756074 TGTAAGTTGCCTGCAATTTATAATGC 59.244 34.615 18.64 4.42 39.24 3.56
1882 2136 4.362279 AGTTGCCTGCAATTTATAATGCG 58.638 39.130 7.94 2.65 45.47 4.73
1883 2137 3.367992 TGCCTGCAATTTATAATGCGG 57.632 42.857 11.44 11.44 45.47 5.69
1884 2138 2.061028 GCCTGCAATTTATAATGCGGC 58.939 47.619 20.59 20.59 46.46 6.53
1885 2139 3.648339 CCTGCAATTTATAATGCGGCT 57.352 42.857 12.55 0.00 45.48 5.52
1886 2140 3.311106 CCTGCAATTTATAATGCGGCTG 58.689 45.455 12.55 6.60 45.48 4.85
1887 2141 3.004629 CCTGCAATTTATAATGCGGCTGA 59.995 43.478 12.55 0.00 45.48 4.26
1888 2142 4.224433 CTGCAATTTATAATGCGGCTGAG 58.776 43.478 6.89 0.00 45.47 3.35
1889 2143 3.004629 TGCAATTTATAATGCGGCTGAGG 59.995 43.478 0.00 0.00 45.47 3.86
1890 2144 3.568538 CAATTTATAATGCGGCTGAGGC 58.431 45.455 0.00 0.00 37.82 4.70
1891 2145 2.638480 TTTATAATGCGGCTGAGGCT 57.362 45.000 4.02 0.00 38.73 4.58
1892 2146 1.882912 TTATAATGCGGCTGAGGCTG 58.117 50.000 4.02 0.00 46.87 4.85
1900 2154 2.434884 GCTGAGGCTGCGTGCTTA 60.435 61.111 0.00 0.00 42.39 3.09
1901 2155 2.459442 GCTGAGGCTGCGTGCTTAG 61.459 63.158 0.00 0.00 42.39 2.18
1902 2156 2.434884 TGAGGCTGCGTGCTTAGC 60.435 61.111 0.00 0.00 42.39 3.09
1903 2157 2.125350 GAGGCTGCGTGCTTAGCT 60.125 61.111 5.60 0.00 42.39 3.32
1904 2158 1.743252 GAGGCTGCGTGCTTAGCTT 60.743 57.895 5.60 0.00 42.39 3.74
1905 2159 1.301677 GAGGCTGCGTGCTTAGCTTT 61.302 55.000 5.60 0.00 42.39 3.51
1906 2160 0.890996 AGGCTGCGTGCTTAGCTTTT 60.891 50.000 5.60 0.00 42.39 2.27
1907 2161 0.039165 GGCTGCGTGCTTAGCTTTTT 60.039 50.000 5.60 0.00 42.39 1.94
1925 2179 4.640789 TTTTTATGTGTTGGCGTGAGTT 57.359 36.364 0.00 0.00 0.00 3.01
1926 2180 4.640789 TTTTATGTGTTGGCGTGAGTTT 57.359 36.364 0.00 0.00 0.00 2.66
1927 2181 3.617540 TTATGTGTTGGCGTGAGTTTG 57.382 42.857 0.00 0.00 0.00 2.93
1928 2182 1.674359 ATGTGTTGGCGTGAGTTTGA 58.326 45.000 0.00 0.00 0.00 2.69
1929 2183 1.674359 TGTGTTGGCGTGAGTTTGAT 58.326 45.000 0.00 0.00 0.00 2.57
1930 2184 2.839975 TGTGTTGGCGTGAGTTTGATA 58.160 42.857 0.00 0.00 0.00 2.15
1931 2185 3.206964 TGTGTTGGCGTGAGTTTGATAA 58.793 40.909 0.00 0.00 0.00 1.75
1932 2186 3.002862 TGTGTTGGCGTGAGTTTGATAAC 59.997 43.478 0.00 0.00 34.36 1.89
1933 2187 3.002862 GTGTTGGCGTGAGTTTGATAACA 59.997 43.478 0.00 0.00 36.70 2.41
1934 2188 3.818210 TGTTGGCGTGAGTTTGATAACAT 59.182 39.130 0.00 0.00 36.70 2.71
1935 2189 4.158384 GTTGGCGTGAGTTTGATAACATG 58.842 43.478 0.00 0.00 36.70 3.21
1936 2190 3.407698 TGGCGTGAGTTTGATAACATGT 58.592 40.909 0.00 0.00 36.70 3.21
1937 2191 4.570930 TGGCGTGAGTTTGATAACATGTA 58.429 39.130 0.00 0.00 36.70 2.29
1938 2192 5.182487 TGGCGTGAGTTTGATAACATGTAT 58.818 37.500 0.00 0.00 36.70 2.29
1939 2193 5.064579 TGGCGTGAGTTTGATAACATGTATG 59.935 40.000 0.00 0.00 36.70 2.39
1940 2194 5.501715 GCGTGAGTTTGATAACATGTATGG 58.498 41.667 0.00 0.00 36.70 2.74
1941 2195 5.293324 GCGTGAGTTTGATAACATGTATGGA 59.707 40.000 0.00 0.00 36.70 3.41
1942 2196 6.705782 CGTGAGTTTGATAACATGTATGGAC 58.294 40.000 0.00 0.00 36.70 4.02
1943 2197 6.312672 CGTGAGTTTGATAACATGTATGGACA 59.687 38.462 0.00 0.00 36.70 4.02
1955 2209 5.840243 ATGTATGGACATGATTTGTGTGG 57.160 39.130 0.00 0.00 44.90 4.17
1956 2210 4.661222 TGTATGGACATGATTTGTGTGGT 58.339 39.130 0.00 0.00 39.18 4.16
1957 2211 4.458642 TGTATGGACATGATTTGTGTGGTG 59.541 41.667 0.00 0.00 39.18 4.17
1958 2212 2.237643 TGGACATGATTTGTGTGGTGG 58.762 47.619 0.00 0.00 39.18 4.61
1959 2213 2.238521 GGACATGATTTGTGTGGTGGT 58.761 47.619 0.00 0.00 39.18 4.16
1960 2214 2.228822 GGACATGATTTGTGTGGTGGTC 59.771 50.000 0.00 0.00 39.18 4.02
1961 2215 2.228822 GACATGATTTGTGTGGTGGTCC 59.771 50.000 0.00 0.00 39.18 4.46
1962 2216 2.158475 ACATGATTTGTGTGGTGGTCCT 60.158 45.455 0.00 0.00 37.11 3.85
1963 2217 1.979855 TGATTTGTGTGGTGGTCCTG 58.020 50.000 0.00 0.00 34.23 3.86
1964 2218 1.214175 TGATTTGTGTGGTGGTCCTGT 59.786 47.619 0.00 0.00 34.23 4.00
1965 2219 2.306847 GATTTGTGTGGTGGTCCTGTT 58.693 47.619 0.00 0.00 34.23 3.16
1966 2220 1.468985 TTTGTGTGGTGGTCCTGTTG 58.531 50.000 0.00 0.00 34.23 3.33
1967 2221 1.034838 TTGTGTGGTGGTCCTGTTGC 61.035 55.000 0.00 0.00 34.23 4.17
1968 2222 1.152963 GTGTGGTGGTCCTGTTGCT 60.153 57.895 0.00 0.00 34.23 3.91
1969 2223 0.751643 GTGTGGTGGTCCTGTTGCTT 60.752 55.000 0.00 0.00 34.23 3.91
1970 2224 0.033601 TGTGGTGGTCCTGTTGCTTT 60.034 50.000 0.00 0.00 34.23 3.51
1971 2225 0.668535 GTGGTGGTCCTGTTGCTTTC 59.331 55.000 0.00 0.00 34.23 2.62
1972 2226 0.257328 TGGTGGTCCTGTTGCTTTCA 59.743 50.000 0.00 0.00 34.23 2.69
1973 2227 1.133513 TGGTGGTCCTGTTGCTTTCAT 60.134 47.619 0.00 0.00 34.23 2.57
1974 2228 1.963515 GGTGGTCCTGTTGCTTTCATT 59.036 47.619 0.00 0.00 0.00 2.57
1975 2229 3.153919 GGTGGTCCTGTTGCTTTCATTA 58.846 45.455 0.00 0.00 0.00 1.90
1976 2230 3.763897 GGTGGTCCTGTTGCTTTCATTAT 59.236 43.478 0.00 0.00 0.00 1.28
1977 2231 4.142381 GGTGGTCCTGTTGCTTTCATTATC 60.142 45.833 0.00 0.00 0.00 1.75
1978 2232 4.702131 GTGGTCCTGTTGCTTTCATTATCT 59.298 41.667 0.00 0.00 0.00 1.98
1979 2233 5.183904 GTGGTCCTGTTGCTTTCATTATCTT 59.816 40.000 0.00 0.00 0.00 2.40
1980 2234 5.774690 TGGTCCTGTTGCTTTCATTATCTTT 59.225 36.000 0.00 0.00 0.00 2.52
1981 2235 6.945435 TGGTCCTGTTGCTTTCATTATCTTTA 59.055 34.615 0.00 0.00 0.00 1.85
1982 2236 7.450014 TGGTCCTGTTGCTTTCATTATCTTTAA 59.550 33.333 0.00 0.00 0.00 1.52
1983 2237 8.303876 GGTCCTGTTGCTTTCATTATCTTTAAA 58.696 33.333 0.00 0.00 0.00 1.52
1984 2238 9.691362 GTCCTGTTGCTTTCATTATCTTTAAAA 57.309 29.630 0.00 0.00 0.00 1.52
1991 2245 9.651913 TGCTTTCATTATCTTTAAAATGGAACC 57.348 29.630 0.00 0.00 34.52 3.62
1992 2246 8.807581 GCTTTCATTATCTTTAAAATGGAACCG 58.192 33.333 0.00 0.00 34.52 4.44
1993 2247 9.301153 CTTTCATTATCTTTAAAATGGAACCGG 57.699 33.333 0.00 0.00 34.52 5.28
1994 2248 7.341445 TCATTATCTTTAAAATGGAACCGGG 57.659 36.000 6.32 0.00 34.52 5.73
1995 2249 7.120051 TCATTATCTTTAAAATGGAACCGGGA 58.880 34.615 6.32 0.00 34.52 5.14
1996 2250 7.616150 TCATTATCTTTAAAATGGAACCGGGAA 59.384 33.333 6.32 0.00 34.52 3.97
1997 2251 5.914898 ATCTTTAAAATGGAACCGGGAAG 57.085 39.130 6.32 0.00 0.00 3.46
1998 2252 4.988029 TCTTTAAAATGGAACCGGGAAGA 58.012 39.130 6.32 0.00 0.00 2.87
1999 2253 5.576128 TCTTTAAAATGGAACCGGGAAGAT 58.424 37.500 6.32 0.00 0.00 2.40
2000 2254 5.417580 TCTTTAAAATGGAACCGGGAAGATG 59.582 40.000 6.32 0.00 0.00 2.90
2001 2255 3.449746 AAAATGGAACCGGGAAGATGA 57.550 42.857 6.32 0.00 0.00 2.92
2002 2256 3.669939 AAATGGAACCGGGAAGATGAT 57.330 42.857 6.32 0.00 0.00 2.45
2003 2257 2.938956 ATGGAACCGGGAAGATGATC 57.061 50.000 6.32 0.00 0.00 2.92
2004 2258 0.837272 TGGAACCGGGAAGATGATCC 59.163 55.000 6.32 0.70 38.86 3.36
2018 2272 8.525290 GGAAGATGATCCCTGATTTTCTAAAA 57.475 34.615 0.00 0.00 33.05 1.52
2019 2273 8.971073 GGAAGATGATCCCTGATTTTCTAAAAA 58.029 33.333 0.00 0.00 33.05 1.94
2044 2298 6.453926 AAAAAGTTGGCTGCAATTTGAATT 57.546 29.167 0.50 0.00 0.00 2.17
2045 2299 6.453926 AAAAGTTGGCTGCAATTTGAATTT 57.546 29.167 0.50 0.00 0.00 1.82
2046 2300 5.427036 AAGTTGGCTGCAATTTGAATTTG 57.573 34.783 0.50 0.00 0.00 2.32
2047 2301 3.816523 AGTTGGCTGCAATTTGAATTTGG 59.183 39.130 0.50 0.00 0.00 3.28
2048 2302 2.780714 TGGCTGCAATTTGAATTTGGG 58.219 42.857 0.50 0.00 0.00 4.12
2049 2303 1.469703 GGCTGCAATTTGAATTTGGGC 59.530 47.619 0.50 0.00 0.00 5.36
2050 2304 1.469703 GCTGCAATTTGAATTTGGGCC 59.530 47.619 0.00 0.00 0.00 5.80
2051 2305 2.780714 CTGCAATTTGAATTTGGGCCA 58.219 42.857 0.00 0.00 0.00 5.36
2052 2306 2.745281 CTGCAATTTGAATTTGGGCCAG 59.255 45.455 6.23 0.00 0.00 4.85
2053 2307 2.106166 TGCAATTTGAATTTGGGCCAGT 59.894 40.909 6.23 0.00 0.00 4.00
2054 2308 2.743664 GCAATTTGAATTTGGGCCAGTC 59.256 45.455 6.23 6.66 0.00 3.51
2055 2309 3.806507 GCAATTTGAATTTGGGCCAGTCA 60.807 43.478 6.23 9.44 0.00 3.41
2056 2310 4.387598 CAATTTGAATTTGGGCCAGTCAA 58.612 39.130 19.53 19.53 0.00 3.18
2057 2311 4.914177 ATTTGAATTTGGGCCAGTCAAT 57.086 36.364 22.34 11.90 0.00 2.57
2058 2312 4.703379 TTTGAATTTGGGCCAGTCAATT 57.297 36.364 22.34 18.31 0.00 2.32
2059 2313 4.703379 TTGAATTTGGGCCAGTCAATTT 57.297 36.364 19.53 2.50 0.00 1.82
2060 2314 4.703379 TGAATTTGGGCCAGTCAATTTT 57.297 36.364 14.21 0.00 0.00 1.82
2061 2315 5.046288 TGAATTTGGGCCAGTCAATTTTT 57.954 34.783 14.21 0.00 0.00 1.94
2062 2316 5.062528 TGAATTTGGGCCAGTCAATTTTTC 58.937 37.500 14.21 5.53 0.00 2.29
2063 2317 4.980339 ATTTGGGCCAGTCAATTTTTCT 57.020 36.364 6.23 0.00 0.00 2.52
2064 2318 4.335400 TTTGGGCCAGTCAATTTTTCTC 57.665 40.909 6.23 0.00 0.00 2.87
2065 2319 2.247358 TGGGCCAGTCAATTTTTCTCC 58.753 47.619 0.00 0.00 0.00 3.71
2066 2320 1.550524 GGGCCAGTCAATTTTTCTCCC 59.449 52.381 4.39 0.00 0.00 4.30
2067 2321 2.247358 GGCCAGTCAATTTTTCTCCCA 58.753 47.619 0.00 0.00 0.00 4.37
2068 2322 2.232208 GGCCAGTCAATTTTTCTCCCAG 59.768 50.000 0.00 0.00 0.00 4.45
2069 2323 2.893489 GCCAGTCAATTTTTCTCCCAGT 59.107 45.455 0.00 0.00 0.00 4.00
2070 2324 3.321968 GCCAGTCAATTTTTCTCCCAGTT 59.678 43.478 0.00 0.00 0.00 3.16
2071 2325 4.797275 GCCAGTCAATTTTTCTCCCAGTTG 60.797 45.833 0.00 0.00 0.00 3.16
2072 2326 4.584325 CCAGTCAATTTTTCTCCCAGTTGA 59.416 41.667 0.00 0.00 0.00 3.18
2073 2327 5.244626 CCAGTCAATTTTTCTCCCAGTTGAT 59.755 40.000 0.00 0.00 0.00 2.57
2074 2328 6.239402 CCAGTCAATTTTTCTCCCAGTTGATT 60.239 38.462 0.00 0.00 0.00 2.57
2075 2329 6.643770 CAGTCAATTTTTCTCCCAGTTGATTG 59.356 38.462 0.00 0.00 30.72 2.67
2076 2330 6.324770 AGTCAATTTTTCTCCCAGTTGATTGT 59.675 34.615 0.00 0.00 0.00 2.71
2077 2331 6.986231 GTCAATTTTTCTCCCAGTTGATTGTT 59.014 34.615 0.00 0.00 0.00 2.83
2078 2332 6.985645 TCAATTTTTCTCCCAGTTGATTGTTG 59.014 34.615 0.00 0.00 0.00 3.33
2079 2333 4.320608 TTTTCTCCCAGTTGATTGTTGC 57.679 40.909 0.00 0.00 0.00 4.17
2080 2334 2.957402 TCTCCCAGTTGATTGTTGCT 57.043 45.000 0.00 0.00 0.00 3.91
2081 2335 2.783135 TCTCCCAGTTGATTGTTGCTC 58.217 47.619 0.00 0.00 0.00 4.26
2082 2336 2.373169 TCTCCCAGTTGATTGTTGCTCT 59.627 45.455 0.00 0.00 0.00 4.09
2083 2337 3.582647 TCTCCCAGTTGATTGTTGCTCTA 59.417 43.478 0.00 0.00 0.00 2.43
2084 2338 4.041567 TCTCCCAGTTGATTGTTGCTCTAA 59.958 41.667 0.00 0.00 0.00 2.10
2085 2339 4.326826 TCCCAGTTGATTGTTGCTCTAAG 58.673 43.478 0.00 0.00 0.00 2.18
2086 2340 4.041567 TCCCAGTTGATTGTTGCTCTAAGA 59.958 41.667 0.00 0.00 0.00 2.10
2087 2341 4.946157 CCCAGTTGATTGTTGCTCTAAGAT 59.054 41.667 0.00 0.00 0.00 2.40
2088 2342 5.416952 CCCAGTTGATTGTTGCTCTAAGATT 59.583 40.000 0.00 0.00 0.00 2.40
2089 2343 6.071728 CCCAGTTGATTGTTGCTCTAAGATTT 60.072 38.462 0.00 0.00 0.00 2.17
2090 2344 6.805271 CCAGTTGATTGTTGCTCTAAGATTTG 59.195 38.462 0.00 0.00 0.00 2.32
2091 2345 7.365741 CAGTTGATTGTTGCTCTAAGATTTGT 58.634 34.615 0.00 0.00 0.00 2.83
2092 2346 7.325338 CAGTTGATTGTTGCTCTAAGATTTGTG 59.675 37.037 0.00 0.00 0.00 3.33
2093 2347 5.702865 TGATTGTTGCTCTAAGATTTGTGC 58.297 37.500 0.00 0.00 0.00 4.57
2094 2348 5.474532 TGATTGTTGCTCTAAGATTTGTGCT 59.525 36.000 3.52 0.00 0.00 4.40
2095 2349 6.654582 TGATTGTTGCTCTAAGATTTGTGCTA 59.345 34.615 3.52 0.00 0.00 3.49
2096 2350 7.337689 TGATTGTTGCTCTAAGATTTGTGCTAT 59.662 33.333 3.52 0.00 0.00 2.97
2097 2351 6.668541 TGTTGCTCTAAGATTTGTGCTATC 57.331 37.500 3.52 0.00 0.00 2.08
2098 2352 6.172630 TGTTGCTCTAAGATTTGTGCTATCA 58.827 36.000 3.52 0.00 0.00 2.15
2099 2353 6.825213 TGTTGCTCTAAGATTTGTGCTATCAT 59.175 34.615 3.52 0.00 0.00 2.45
2100 2354 7.337689 TGTTGCTCTAAGATTTGTGCTATCATT 59.662 33.333 3.52 0.00 0.00 2.57
2101 2355 7.870509 TGCTCTAAGATTTGTGCTATCATTT 57.129 32.000 3.52 0.00 0.00 2.32
2102 2356 8.284945 TGCTCTAAGATTTGTGCTATCATTTT 57.715 30.769 3.52 0.00 0.00 1.82
2103 2357 8.742777 TGCTCTAAGATTTGTGCTATCATTTTT 58.257 29.630 3.52 0.00 0.00 1.94
2144 2398 2.923605 TTTTTCCGTTGTGTGGTGAC 57.076 45.000 0.00 0.00 0.00 3.67
2145 2399 2.116827 TTTTCCGTTGTGTGGTGACT 57.883 45.000 0.00 0.00 0.00 3.41
2146 2400 2.116827 TTTCCGTTGTGTGGTGACTT 57.883 45.000 0.00 0.00 0.00 3.01
2147 2401 1.374560 TTCCGTTGTGTGGTGACTTG 58.625 50.000 0.00 0.00 0.00 3.16
2148 2402 0.250793 TCCGTTGTGTGGTGACTTGT 59.749 50.000 0.00 0.00 0.00 3.16
2149 2403 1.091537 CCGTTGTGTGGTGACTTGTT 58.908 50.000 0.00 0.00 0.00 2.83
2150 2404 1.470890 CCGTTGTGTGGTGACTTGTTT 59.529 47.619 0.00 0.00 0.00 2.83
2151 2405 2.094957 CCGTTGTGTGGTGACTTGTTTT 60.095 45.455 0.00 0.00 0.00 2.43
2152 2406 2.914214 CGTTGTGTGGTGACTTGTTTTG 59.086 45.455 0.00 0.00 0.00 2.44
2153 2407 3.365465 CGTTGTGTGGTGACTTGTTTTGA 60.365 43.478 0.00 0.00 0.00 2.69
2154 2408 4.165779 GTTGTGTGGTGACTTGTTTTGAG 58.834 43.478 0.00 0.00 0.00 3.02
2155 2409 2.163412 TGTGTGGTGACTTGTTTTGAGC 59.837 45.455 0.00 0.00 0.00 4.26
2156 2410 2.423538 GTGTGGTGACTTGTTTTGAGCT 59.576 45.455 0.00 0.00 0.00 4.09
2157 2411 2.423185 TGTGGTGACTTGTTTTGAGCTG 59.577 45.455 0.00 0.00 0.00 4.24
2158 2412 2.682856 GTGGTGACTTGTTTTGAGCTGA 59.317 45.455 0.00 0.00 0.00 4.26
2159 2413 2.945008 TGGTGACTTGTTTTGAGCTGAG 59.055 45.455 0.00 0.00 0.00 3.35
2160 2414 3.206150 GGTGACTTGTTTTGAGCTGAGA 58.794 45.455 0.00 0.00 0.00 3.27
2161 2415 3.002759 GGTGACTTGTTTTGAGCTGAGAC 59.997 47.826 0.00 0.00 0.00 3.36
2162 2416 3.873952 GTGACTTGTTTTGAGCTGAGACT 59.126 43.478 0.00 0.00 0.00 3.24
2163 2417 4.333926 GTGACTTGTTTTGAGCTGAGACTT 59.666 41.667 0.00 0.00 0.00 3.01
2164 2418 4.943705 TGACTTGTTTTGAGCTGAGACTTT 59.056 37.500 0.00 0.00 0.00 2.66
2165 2419 6.037172 GTGACTTGTTTTGAGCTGAGACTTTA 59.963 38.462 0.00 0.00 0.00 1.85
2166 2420 6.597672 TGACTTGTTTTGAGCTGAGACTTTAA 59.402 34.615 0.00 0.00 0.00 1.52
2167 2421 7.020914 ACTTGTTTTGAGCTGAGACTTTAAG 57.979 36.000 0.00 0.00 0.00 1.85
2168 2422 6.823689 ACTTGTTTTGAGCTGAGACTTTAAGA 59.176 34.615 0.00 0.00 0.00 2.10
2169 2423 6.604735 TGTTTTGAGCTGAGACTTTAAGAC 57.395 37.500 0.00 0.00 0.00 3.01
2170 2424 6.349300 TGTTTTGAGCTGAGACTTTAAGACT 58.651 36.000 0.00 0.00 0.00 3.24
2171 2425 7.497595 TGTTTTGAGCTGAGACTTTAAGACTA 58.502 34.615 0.00 0.00 0.00 2.59
2172 2426 7.985184 TGTTTTGAGCTGAGACTTTAAGACTAA 59.015 33.333 0.00 0.00 0.00 2.24
2173 2427 7.948278 TTTGAGCTGAGACTTTAAGACTAAC 57.052 36.000 0.00 0.00 0.00 2.34
2174 2428 6.026947 TGAGCTGAGACTTTAAGACTAACC 57.973 41.667 0.00 0.00 0.00 2.85
2175 2429 5.775701 TGAGCTGAGACTTTAAGACTAACCT 59.224 40.000 0.00 0.00 0.00 3.50
2176 2430 6.071840 TGAGCTGAGACTTTAAGACTAACCTC 60.072 42.308 0.00 5.17 0.00 3.85
2177 2431 6.014012 AGCTGAGACTTTAAGACTAACCTCT 58.986 40.000 0.00 0.00 0.00 3.69
2178 2432 7.176490 AGCTGAGACTTTAAGACTAACCTCTA 58.824 38.462 0.00 0.00 0.00 2.43
2179 2433 7.837187 AGCTGAGACTTTAAGACTAACCTCTAT 59.163 37.037 0.00 0.00 0.00 1.98
2180 2434 7.918562 GCTGAGACTTTAAGACTAACCTCTATG 59.081 40.741 0.00 0.00 0.00 2.23
2181 2435 9.179909 CTGAGACTTTAAGACTAACCTCTATGA 57.820 37.037 0.00 0.00 0.00 2.15
2182 2436 9.702253 TGAGACTTTAAGACTAACCTCTATGAT 57.298 33.333 0.00 0.00 0.00 2.45
2183 2437 9.959749 GAGACTTTAAGACTAACCTCTATGATG 57.040 37.037 0.00 0.00 0.00 3.07
2184 2438 8.417884 AGACTTTAAGACTAACCTCTATGATGC 58.582 37.037 0.00 0.00 0.00 3.91
2185 2439 8.079211 ACTTTAAGACTAACCTCTATGATGCA 57.921 34.615 0.00 0.00 0.00 3.96
2186 2440 8.709308 ACTTTAAGACTAACCTCTATGATGCAT 58.291 33.333 0.00 0.00 0.00 3.96
2187 2441 9.553064 CTTTAAGACTAACCTCTATGATGCATT 57.447 33.333 0.00 0.00 0.00 3.56
2188 2442 9.905713 TTTAAGACTAACCTCTATGATGCATTT 57.094 29.630 0.00 0.00 0.00 2.32
2191 2445 8.256356 AGACTAACCTCTATGATGCATTTAGT 57.744 34.615 13.37 13.37 30.18 2.24
2192 2446 8.364142 AGACTAACCTCTATGATGCATTTAGTC 58.636 37.037 23.71 23.71 38.31 2.59
2193 2447 8.023021 ACTAACCTCTATGATGCATTTAGTCA 57.977 34.615 0.00 0.00 0.00 3.41
2194 2448 8.486210 ACTAACCTCTATGATGCATTTAGTCAA 58.514 33.333 0.00 0.00 0.00 3.18
2195 2449 9.499479 CTAACCTCTATGATGCATTTAGTCAAT 57.501 33.333 0.00 0.00 0.00 2.57
2197 2451 8.839310 ACCTCTATGATGCATTTAGTCAATAC 57.161 34.615 0.00 0.00 0.00 1.89
2198 2452 7.880195 ACCTCTATGATGCATTTAGTCAATACC 59.120 37.037 0.00 0.00 0.00 2.73
2199 2453 8.099537 CCTCTATGATGCATTTAGTCAATACCT 58.900 37.037 0.00 0.00 0.00 3.08
2200 2454 9.499479 CTCTATGATGCATTTAGTCAATACCTT 57.501 33.333 0.00 0.00 0.00 3.50
2204 2458 7.915508 TGATGCATTTAGTCAATACCTTAACG 58.084 34.615 0.00 0.00 0.00 3.18
2205 2459 6.671614 TGCATTTAGTCAATACCTTAACGG 57.328 37.500 0.00 0.00 39.35 4.44
2206 2460 5.587043 TGCATTTAGTCAATACCTTAACGGG 59.413 40.000 0.00 0.00 36.97 5.28
2207 2461 5.008316 GCATTTAGTCAATACCTTAACGGGG 59.992 44.000 0.00 0.00 36.97 5.73
2208 2462 2.704464 AGTCAATACCTTAACGGGGC 57.296 50.000 0.00 0.00 36.97 5.80
2209 2463 1.134610 AGTCAATACCTTAACGGGGCG 60.135 52.381 0.00 0.00 36.97 6.13
2210 2464 1.134729 GTCAATACCTTAACGGGGCGA 60.135 52.381 0.00 0.00 36.97 5.54
2211 2465 1.137479 TCAATACCTTAACGGGGCGAG 59.863 52.381 0.00 0.00 36.97 5.03
2212 2466 0.466963 AATACCTTAACGGGGCGAGG 59.533 55.000 0.00 0.00 36.97 4.63
2213 2467 2.036428 ATACCTTAACGGGGCGAGGC 62.036 60.000 0.00 0.00 36.97 4.70
2223 2477 3.841870 GGCGAGGCCCCTTAATTG 58.158 61.111 0.00 0.00 44.06 2.32
2224 2478 1.828224 GGCGAGGCCCCTTAATTGG 60.828 63.158 0.00 0.00 44.06 3.16
2225 2479 1.828224 GCGAGGCCCCTTAATTGGG 60.828 63.158 0.00 5.95 46.56 4.12
2243 2497 1.946745 GGCAACCAAGCTAGCTCTAG 58.053 55.000 19.65 12.16 36.29 2.43
2324 2578 2.088950 GCATGCTTTCAGCCATTTGT 57.911 45.000 11.37 0.00 41.51 2.83
2333 2587 2.861274 TCAGCCATTTGTCACATGTCA 58.139 42.857 0.00 0.00 0.00 3.58
2338 2592 3.615592 GCCATTTGTCACATGTCATGCTT 60.616 43.478 12.91 0.00 0.00 3.91
2340 2594 4.624024 CCATTTGTCACATGTCATGCTTTC 59.376 41.667 12.91 2.45 0.00 2.62
2348 2602 1.014044 TGTCATGCTTTCGACGCTCC 61.014 55.000 7.33 0.00 34.78 4.70
2364 2618 3.135167 ACGCTCCCTCCGGATTTTATTTA 59.865 43.478 3.57 0.00 37.60 1.40
2410 2665 5.036090 TCTCGGCTTTTTAAACGGTTTTTC 58.964 37.500 11.87 0.00 0.00 2.29
2413 2668 4.207635 CGGCTTTTTAAACGGTTTTTCCTC 59.792 41.667 11.87 0.00 0.00 3.71
2414 2669 4.508861 GGCTTTTTAAACGGTTTTTCCTCC 59.491 41.667 11.87 3.57 0.00 4.30
2420 2675 1.228337 CGGTTTTTCCTCCGGGGTT 60.228 57.895 0.00 0.00 42.61 4.11
2467 2727 5.452777 CGGTCTTCCTTAGCTTTCAAAAAG 58.547 41.667 0.00 0.00 0.00 2.27
2470 2730 7.489160 GGTCTTCCTTAGCTTTCAAAAAGAAA 58.511 34.615 0.00 0.00 43.71 2.52
2521 2783 1.495584 GAGTCGCGGTTGTGCTTTCA 61.496 55.000 6.13 0.00 0.00 2.69
2525 2787 1.574428 GCGGTTGTGCTTTCACGAT 59.426 52.632 0.00 0.00 46.01 3.73
2545 2807 0.396435 AGTCATGGACGTGCCTTTCA 59.604 50.000 4.04 0.00 37.67 2.69
2586 2875 0.898789 TTTCTCCTTCCGCGAGAGGT 60.899 55.000 21.78 0.00 37.65 3.85
2614 2903 1.081376 CTTTCGCGAGAGTCACGGT 60.081 57.895 17.92 0.00 43.69 4.83
2625 2914 1.593209 GTCACGGTCGTGCCTTTCA 60.593 57.895 17.46 0.00 45.04 2.69
2630 2919 1.156736 CGGTCGTGCCTTTCAGAAAT 58.843 50.000 0.00 0.00 34.25 2.17
2631 2920 2.289195 ACGGTCGTGCCTTTCAGAAATA 60.289 45.455 0.00 0.00 34.25 1.40
2632 2921 2.739913 CGGTCGTGCCTTTCAGAAATAA 59.260 45.455 0.00 0.00 34.25 1.40
2681 2972 3.247033 GCGAGAGGCATGATTTTGC 57.753 52.632 0.00 0.00 42.87 3.68
2682 2973 0.737219 GCGAGAGGCATGATTTTGCT 59.263 50.000 0.00 0.00 42.38 3.91
2683 2974 1.133790 GCGAGAGGCATGATTTTGCTT 59.866 47.619 0.00 0.00 42.38 3.91
2684 2975 2.793933 GCGAGAGGCATGATTTTGCTTC 60.794 50.000 0.00 0.80 46.00 3.86
2685 2976 2.223433 CGAGAGGCATGATTTTGCTTCC 60.223 50.000 0.00 0.00 46.61 3.46
2686 2977 1.747355 AGAGGCATGATTTTGCTTCCG 59.253 47.619 0.00 0.00 46.61 4.30
2687 2978 1.474077 GAGGCATGATTTTGCTTCCGT 59.526 47.619 0.00 0.00 41.44 4.69
2688 2979 1.203052 AGGCATGATTTTGCTTCCGTG 59.797 47.619 0.00 0.00 42.38 4.94
2689 2980 1.202114 GGCATGATTTTGCTTCCGTGA 59.798 47.619 0.00 0.00 42.38 4.35
2690 2981 2.352617 GGCATGATTTTGCTTCCGTGAA 60.353 45.455 0.00 0.00 42.38 3.18
2691 2982 3.316283 GCATGATTTTGCTTCCGTGAAA 58.684 40.909 0.00 0.00 39.57 2.69
2692 2983 3.365820 GCATGATTTTGCTTCCGTGAAAG 59.634 43.478 0.00 0.00 39.57 2.62
2693 2984 3.641437 TGATTTTGCTTCCGTGAAAGG 57.359 42.857 0.00 0.00 0.00 3.11
2694 2985 2.288152 TGATTTTGCTTCCGTGAAAGGC 60.288 45.455 0.00 0.00 0.00 4.35
2695 2986 1.107114 TTTTGCTTCCGTGAAAGGCA 58.893 45.000 0.00 0.00 0.00 4.75
2696 2987 0.383949 TTTGCTTCCGTGAAAGGCAC 59.616 50.000 0.00 0.00 44.21 5.01
2711 3002 2.425124 CACGGTTGTGCTTTCGCG 60.425 61.111 0.00 0.00 39.67 5.87
2712 3003 3.645975 ACGGTTGTGCTTTCGCGG 61.646 61.111 6.13 0.00 39.65 6.46
2713 3004 4.383602 CGGTTGTGCTTTCGCGGG 62.384 66.667 6.13 0.00 39.65 6.13
2714 3005 2.975799 GGTTGTGCTTTCGCGGGA 60.976 61.111 6.13 0.00 39.65 5.14
2715 3006 2.556287 GTTGTGCTTTCGCGGGAG 59.444 61.111 6.13 5.71 39.65 4.30
2716 3007 2.668212 TTGTGCTTTCGCGGGAGG 60.668 61.111 6.13 1.29 39.65 4.30
2737 3028 3.693411 GGCCATGCCTTTCGGAAA 58.307 55.556 0.00 2.78 46.69 3.13
2738 3029 1.971418 GGCCATGCCTTTCGGAAAA 59.029 52.632 0.00 0.00 46.69 2.29
2739 3030 0.108662 GGCCATGCCTTTCGGAAAAG 60.109 55.000 0.00 0.00 46.69 2.27
2740 3031 0.887933 GCCATGCCTTTCGGAAAAGA 59.112 50.000 4.53 0.00 43.90 2.52
2741 3032 1.272212 GCCATGCCTTTCGGAAAAGAA 59.728 47.619 4.53 0.00 43.90 2.52
2742 3033 2.288763 GCCATGCCTTTCGGAAAAGAAA 60.289 45.455 4.53 0.00 43.90 2.52
2743 3034 3.801983 GCCATGCCTTTCGGAAAAGAAAA 60.802 43.478 4.53 0.00 43.90 2.29
2744 3035 4.376146 CCATGCCTTTCGGAAAAGAAAAA 58.624 39.130 4.53 0.00 43.90 1.94
2783 3074 4.742201 TTCCGCGAGAGGCACTGC 62.742 66.667 8.23 0.00 41.55 4.40
2795 3086 2.253452 CACTGCTGTGCTTTCGCC 59.747 61.111 11.01 0.00 37.38 5.54
2796 3087 3.349006 ACTGCTGTGCTTTCGCCG 61.349 61.111 0.00 0.00 34.43 6.46
2822 3136 2.626780 GGCCGTGCCTCTTGGAAAC 61.627 63.158 7.58 0.00 46.69 2.78
2867 3181 1.922135 TTTTGCTTCCGCGAGATGCC 61.922 55.000 22.90 12.01 43.37 4.40
2869 3183 4.838152 GCTTCCGCGAGATGCCCA 62.838 66.667 8.23 0.00 42.08 5.36
2876 3190 1.153958 GCGAGATGCCCAGTTTTGC 60.154 57.895 0.00 0.00 37.76 3.68
2878 3192 0.883833 CGAGATGCCCAGTTTTGCTT 59.116 50.000 0.00 0.00 0.00 3.91
3002 3344 1.901650 GCTTTTGCGAGAGACACGGG 61.902 60.000 0.00 0.00 34.86 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.101835 TAAATGCGACGGCCGAACC 61.102 57.895 35.90 18.90 41.76 3.62
5 6 1.059838 GTAAATGCGACGGCCGAAC 59.940 57.895 35.90 23.34 41.76 3.95
6 7 1.079681 AGTAAATGCGACGGCCGAA 60.080 52.632 35.90 14.80 41.76 4.30
7 8 1.517694 GAGTAAATGCGACGGCCGA 60.518 57.895 35.90 10.13 41.76 5.54
8 9 2.522638 GGAGTAAATGCGACGGCCG 61.523 63.158 26.86 26.86 38.85 6.13
9 10 3.406559 GGAGTAAATGCGACGGCC 58.593 61.111 0.00 0.00 38.85 6.13
15 16 1.523032 GGGGACCGGAGTAAATGCG 60.523 63.158 9.46 0.00 40.86 4.73
16 17 4.553668 GGGGACCGGAGTAAATGC 57.446 61.111 9.46 0.00 40.86 3.56
33 34 2.087009 GTTCTGTCCTCCGCGTTCG 61.087 63.158 4.92 0.00 0.00 3.95
34 35 2.087009 CGTTCTGTCCTCCGCGTTC 61.087 63.158 4.92 0.00 0.00 3.95
35 36 2.049433 CGTTCTGTCCTCCGCGTT 60.049 61.111 4.92 0.00 0.00 4.84
36 37 4.719369 GCGTTCTGTCCTCCGCGT 62.719 66.667 4.92 0.00 36.53 6.01
38 39 2.292794 TATGGCGTTCTGTCCTCCGC 62.293 60.000 0.00 0.00 45.05 5.54
39 40 0.527817 GTATGGCGTTCTGTCCTCCG 60.528 60.000 0.00 0.00 0.00 4.63
40 41 0.527817 CGTATGGCGTTCTGTCCTCC 60.528 60.000 0.00 0.00 35.54 4.30
41 42 2.959275 CGTATGGCGTTCTGTCCTC 58.041 57.895 0.00 0.00 35.54 3.71
51 52 2.954868 GTCGCTCCACGTATGGCG 60.955 66.667 17.78 17.78 46.80 5.69
52 53 2.954868 CGTCGCTCCACGTATGGC 60.955 66.667 0.00 0.00 46.80 4.40
54 55 2.954868 GCCGTCGCTCCACGTATG 60.955 66.667 0.00 0.00 44.19 2.39
55 56 3.138798 AGCCGTCGCTCCACGTAT 61.139 61.111 0.00 0.00 43.95 3.06
77 78 4.477975 CAGGTCGTCGGCGGAGAC 62.478 72.222 21.24 21.24 38.89 3.36
78 79 4.710167 TCAGGTCGTCGGCGGAGA 62.710 66.667 10.62 3.80 38.89 3.71
79 80 4.180946 CTCAGGTCGTCGGCGGAG 62.181 72.222 10.62 3.99 38.89 4.63
82 83 4.838486 GAGCTCAGGTCGTCGGCG 62.838 72.222 9.40 1.15 39.92 6.46
83 84 4.500116 GGAGCTCAGGTCGTCGGC 62.500 72.222 17.19 0.00 0.00 5.54
84 85 1.030488 TAAGGAGCTCAGGTCGTCGG 61.030 60.000 17.19 0.00 0.00 4.79
85 86 1.002251 GATAAGGAGCTCAGGTCGTCG 60.002 57.143 17.19 0.00 0.00 5.12
86 87 2.034053 CAGATAAGGAGCTCAGGTCGTC 59.966 54.545 17.19 5.58 0.00 4.20
87 88 2.028130 CAGATAAGGAGCTCAGGTCGT 58.972 52.381 17.19 0.00 0.00 4.34
88 89 2.302260 TCAGATAAGGAGCTCAGGTCG 58.698 52.381 17.19 4.99 0.00 4.79
89 90 3.258123 GGATCAGATAAGGAGCTCAGGTC 59.742 52.174 17.19 7.72 0.00 3.85
90 91 3.116784 AGGATCAGATAAGGAGCTCAGGT 60.117 47.826 17.19 1.94 0.00 4.00
91 92 3.509442 AGGATCAGATAAGGAGCTCAGG 58.491 50.000 17.19 0.00 0.00 3.86
92 93 4.706476 CCTAGGATCAGATAAGGAGCTCAG 59.294 50.000 17.19 0.00 0.00 3.35
93 94 4.671831 CCTAGGATCAGATAAGGAGCTCA 58.328 47.826 17.19 0.00 0.00 4.26
94 95 3.447229 GCCTAGGATCAGATAAGGAGCTC 59.553 52.174 14.75 4.71 0.00 4.09
95 96 3.440127 GCCTAGGATCAGATAAGGAGCT 58.560 50.000 14.75 0.00 0.00 4.09
96 97 2.499693 GGCCTAGGATCAGATAAGGAGC 59.500 54.545 14.75 0.00 0.00 4.70
97 98 3.103742 GGGCCTAGGATCAGATAAGGAG 58.896 54.545 14.75 0.00 0.00 3.69
98 99 2.454772 TGGGCCTAGGATCAGATAAGGA 59.545 50.000 14.75 0.00 0.00 3.36
99 100 2.569404 GTGGGCCTAGGATCAGATAAGG 59.431 54.545 14.75 2.66 0.00 2.69
100 101 2.569404 GGTGGGCCTAGGATCAGATAAG 59.431 54.545 14.75 0.00 0.00 1.73
101 102 2.621070 GGTGGGCCTAGGATCAGATAA 58.379 52.381 14.75 0.00 0.00 1.75
102 103 1.203313 GGGTGGGCCTAGGATCAGATA 60.203 57.143 14.75 0.00 34.45 1.98
103 104 0.474660 GGGTGGGCCTAGGATCAGAT 60.475 60.000 14.75 0.00 34.45 2.90
104 105 1.074471 GGGTGGGCCTAGGATCAGA 60.074 63.158 14.75 0.00 34.45 3.27
105 106 0.769776 ATGGGTGGGCCTAGGATCAG 60.770 60.000 14.75 0.00 34.45 2.90
106 107 0.570727 TATGGGTGGGCCTAGGATCA 59.429 55.000 14.75 6.68 34.45 2.92
107 108 1.561542 CATATGGGTGGGCCTAGGATC 59.438 57.143 14.75 3.70 34.45 3.36
108 109 1.673767 CATATGGGTGGGCCTAGGAT 58.326 55.000 14.75 0.00 34.45 3.24
109 110 0.475632 CCATATGGGTGGGCCTAGGA 60.476 60.000 14.75 0.00 35.55 2.94
110 111 2.078452 CCATATGGGTGGGCCTAGG 58.922 63.158 14.52 3.67 35.55 3.02
120 121 1.475034 CCAGGACGTTGACCATATGGG 60.475 57.143 25.55 9.85 44.81 4.00
121 122 1.209504 ACCAGGACGTTGACCATATGG 59.790 52.381 20.68 20.68 42.17 2.74
122 123 2.550978 GACCAGGACGTTGACCATATG 58.449 52.381 0.00 0.00 0.00 1.78
123 124 1.485066 GGACCAGGACGTTGACCATAT 59.515 52.381 0.00 0.00 0.00 1.78
124 125 0.899720 GGACCAGGACGTTGACCATA 59.100 55.000 0.00 0.00 0.00 2.74
125 126 1.125093 TGGACCAGGACGTTGACCAT 61.125 55.000 0.00 0.00 0.00 3.55
126 127 1.125093 ATGGACCAGGACGTTGACCA 61.125 55.000 0.00 0.00 0.00 4.02
127 128 0.673644 CATGGACCAGGACGTTGACC 60.674 60.000 0.00 0.00 0.00 4.02
128 129 0.673644 CCATGGACCAGGACGTTGAC 60.674 60.000 5.56 0.00 0.00 3.18
129 130 0.834261 TCCATGGACCAGGACGTTGA 60.834 55.000 11.44 0.00 0.00 3.18
130 131 0.673644 GTCCATGGACCAGGACGTTG 60.674 60.000 31.37 5.65 44.23 4.10
131 132 1.677552 GTCCATGGACCAGGACGTT 59.322 57.895 31.37 0.00 44.23 3.99
132 133 3.388841 GTCCATGGACCAGGACGT 58.611 61.111 31.37 0.00 44.23 4.34
140 141 2.584608 CCGAGGTGGTCCATGGAC 59.415 66.667 33.14 33.14 43.87 4.02
141 142 3.399181 GCCGAGGTGGTCCATGGA 61.399 66.667 11.44 11.44 41.21 3.41
142 143 4.489771 GGCCGAGGTGGTCCATGG 62.490 72.222 4.97 4.97 41.21 3.66
158 159 3.459063 GACGGAAGGAGGACGGGG 61.459 72.222 0.00 0.00 0.00 5.73
159 160 3.459063 GGACGGAAGGAGGACGGG 61.459 72.222 0.00 0.00 0.00 5.28
160 161 3.823330 CGGACGGAAGGAGGACGG 61.823 72.222 0.00 0.00 0.00 4.79
161 162 2.749044 TCGGACGGAAGGAGGACG 60.749 66.667 0.00 0.00 0.00 4.79
162 163 2.708865 GGTCGGACGGAAGGAGGAC 61.709 68.421 1.43 0.00 0.00 3.85
163 164 2.362120 GGTCGGACGGAAGGAGGA 60.362 66.667 1.43 0.00 0.00 3.71
164 165 3.459063 GGGTCGGACGGAAGGAGG 61.459 72.222 1.43 0.00 0.00 4.30
165 166 3.459063 GGGGTCGGACGGAAGGAG 61.459 72.222 1.43 0.00 0.00 3.69
168 169 4.125695 GACGGGGTCGGACGGAAG 62.126 72.222 1.43 0.00 41.39 3.46
183 184 2.934570 TTGGTGGGTCCGTAGCGAC 61.935 63.158 0.00 0.00 39.52 5.19
184 185 2.601067 TTGGTGGGTCCGTAGCGA 60.601 61.111 0.00 0.00 39.52 4.93
185 186 2.433664 GTTGGTGGGTCCGTAGCG 60.434 66.667 0.00 0.00 39.52 4.26
186 187 1.079336 GAGTTGGTGGGTCCGTAGC 60.079 63.158 0.00 0.00 39.52 3.58
187 188 1.214589 CGAGTTGGTGGGTCCGTAG 59.785 63.158 0.00 0.00 39.52 3.51
188 189 2.934570 GCGAGTTGGTGGGTCCGTA 61.935 63.158 0.00 0.00 39.52 4.02
189 190 4.309950 GCGAGTTGGTGGGTCCGT 62.310 66.667 0.00 0.00 39.52 4.69
191 192 3.948719 TGGCGAGTTGGTGGGTCC 61.949 66.667 0.00 0.00 0.00 4.46
192 193 2.668550 GTGGCGAGTTGGTGGGTC 60.669 66.667 0.00 0.00 0.00 4.46
193 194 3.168528 AGTGGCGAGTTGGTGGGT 61.169 61.111 0.00 0.00 0.00 4.51
194 195 2.669569 CAGTGGCGAGTTGGTGGG 60.670 66.667 0.00 0.00 0.00 4.61
195 196 1.101049 AAACAGTGGCGAGTTGGTGG 61.101 55.000 0.00 0.00 0.00 4.61
196 197 0.307760 GAAACAGTGGCGAGTTGGTG 59.692 55.000 0.00 0.00 0.00 4.17
197 198 1.157870 CGAAACAGTGGCGAGTTGGT 61.158 55.000 0.00 0.00 0.00 3.67
198 199 1.157870 ACGAAACAGTGGCGAGTTGG 61.158 55.000 8.89 0.00 0.00 3.77
199 200 1.191647 GTACGAAACAGTGGCGAGTTG 59.808 52.381 8.89 0.00 0.00 3.16
200 201 1.494824 GTACGAAACAGTGGCGAGTT 58.505 50.000 8.89 0.00 0.00 3.01
201 202 0.319297 GGTACGAAACAGTGGCGAGT 60.319 55.000 8.89 0.08 0.00 4.18
202 203 2.442084 GGTACGAAACAGTGGCGAG 58.558 57.895 8.89 0.00 0.00 5.03
203 204 4.659480 GGTACGAAACAGTGGCGA 57.341 55.556 8.89 0.00 0.00 5.54
220 221 1.611592 GGATTACGCCGCGGAATACG 61.612 60.000 33.48 25.21 40.76 3.06
221 222 0.319297 AGGATTACGCCGCGGAATAC 60.319 55.000 33.48 23.30 40.76 1.89
222 223 0.390124 AAGGATTACGCCGCGGAATA 59.610 50.000 33.48 17.58 40.76 1.75
223 224 0.463116 AAAGGATTACGCCGCGGAAT 60.463 50.000 33.48 23.10 43.59 3.01
224 225 0.674269 AAAAGGATTACGCCGCGGAA 60.674 50.000 33.48 13.89 32.91 4.30
225 226 1.078988 AAAAGGATTACGCCGCGGA 60.079 52.632 33.48 8.40 0.00 5.54
226 227 1.087771 AGAAAAGGATTACGCCGCGG 61.088 55.000 24.05 24.05 0.00 6.46
227 228 0.300789 GAGAAAAGGATTACGCCGCG 59.699 55.000 12.14 12.14 0.00 6.46
228 229 1.593469 GAGAGAAAAGGATTACGCCGC 59.407 52.381 0.00 0.00 0.00 6.53
229 230 1.852895 CGAGAGAAAAGGATTACGCCG 59.147 52.381 0.00 0.00 0.00 6.46
230 231 3.160777 TCGAGAGAAAAGGATTACGCC 57.839 47.619 0.00 0.00 37.03 5.68
243 244 3.738590 CTCGTCTGACAGGTATCGAGAGA 60.739 52.174 22.55 0.00 44.58 3.10
244 245 2.542178 CTCGTCTGACAGGTATCGAGAG 59.458 54.545 22.55 10.82 44.58 3.20
245 246 2.552031 CTCGTCTGACAGGTATCGAGA 58.448 52.381 22.55 0.00 44.58 4.04
246 247 1.003331 GCTCGTCTGACAGGTATCGAG 60.003 57.143 22.62 22.62 44.60 4.04
247 248 1.015109 GCTCGTCTGACAGGTATCGA 58.985 55.000 8.73 7.52 0.00 3.59
248 249 0.029567 GGCTCGTCTGACAGGTATCG 59.970 60.000 8.73 3.66 0.00 2.92
249 250 1.066303 CTGGCTCGTCTGACAGGTATC 59.934 57.143 8.73 0.00 39.32 2.24
250 251 1.107114 CTGGCTCGTCTGACAGGTAT 58.893 55.000 8.73 0.00 39.32 2.73
251 252 1.595993 GCTGGCTCGTCTGACAGGTA 61.596 60.000 8.73 0.00 43.05 3.08
252 253 2.936912 GCTGGCTCGTCTGACAGGT 61.937 63.158 8.73 0.00 43.05 4.00
253 254 2.125753 GCTGGCTCGTCTGACAGG 60.126 66.667 8.73 0.85 43.05 4.00
254 255 2.505777 CGCTGGCTCGTCTGACAG 60.506 66.667 8.73 0.00 45.48 3.51
255 256 4.056125 CCGCTGGCTCGTCTGACA 62.056 66.667 8.73 0.00 0.00 3.58
266 267 1.808945 GATGAGGAATAATGCCGCTGG 59.191 52.381 0.00 0.00 0.00 4.85
267 268 1.808945 GGATGAGGAATAATGCCGCTG 59.191 52.381 0.00 0.00 0.00 5.18
268 269 1.271597 GGGATGAGGAATAATGCCGCT 60.272 52.381 0.00 0.00 0.00 5.52
269 270 1.168714 GGGATGAGGAATAATGCCGC 58.831 55.000 0.00 0.00 0.00 6.53
270 271 2.566833 TGGGATGAGGAATAATGCCG 57.433 50.000 0.00 0.00 0.00 5.69
271 272 4.834496 TGATTTGGGATGAGGAATAATGCC 59.166 41.667 0.00 0.00 0.00 4.40
272 273 5.563475 CGTGATTTGGGATGAGGAATAATGC 60.563 44.000 0.00 0.00 0.00 3.56
273 274 5.048504 CCGTGATTTGGGATGAGGAATAATG 60.049 44.000 0.00 0.00 0.00 1.90
274 275 5.072741 CCGTGATTTGGGATGAGGAATAAT 58.927 41.667 0.00 0.00 0.00 1.28
275 276 4.165180 TCCGTGATTTGGGATGAGGAATAA 59.835 41.667 0.00 0.00 0.00 1.40
276 277 3.714280 TCCGTGATTTGGGATGAGGAATA 59.286 43.478 0.00 0.00 0.00 1.75
277 278 2.509548 TCCGTGATTTGGGATGAGGAAT 59.490 45.455 0.00 0.00 0.00 3.01
278 279 1.912731 TCCGTGATTTGGGATGAGGAA 59.087 47.619 0.00 0.00 0.00 3.36
279 280 1.209504 GTCCGTGATTTGGGATGAGGA 59.790 52.381 0.00 0.00 34.25 3.71
280 281 1.668419 GTCCGTGATTTGGGATGAGG 58.332 55.000 0.00 0.00 34.25 3.86
281 282 1.290203 CGTCCGTGATTTGGGATGAG 58.710 55.000 0.00 0.00 41.00 2.90
282 283 0.107897 CCGTCCGTGATTTGGGATGA 60.108 55.000 0.97 0.00 41.00 2.92
283 284 1.095228 CCCGTCCGTGATTTGGGATG 61.095 60.000 0.00 0.00 42.77 3.51
284 285 1.223487 CCCGTCCGTGATTTGGGAT 59.777 57.895 0.00 0.00 42.77 3.85
285 286 2.666207 CCCGTCCGTGATTTGGGA 59.334 61.111 0.00 0.00 42.77 4.37
286 287 3.131478 GCCCGTCCGTGATTTGGG 61.131 66.667 0.00 0.00 43.02 4.12
287 288 3.131478 GGCCCGTCCGTGATTTGG 61.131 66.667 0.00 0.00 0.00 3.28
301 302 3.617538 CTCGAAATCGCGACGGCC 61.618 66.667 12.93 0.00 39.60 6.13
302 303 4.267013 GCTCGAAATCGCGACGGC 62.267 66.667 12.93 12.64 39.60 5.68
309 310 1.561730 CCATCTGCGCTCGAAATCG 59.438 57.895 9.73 0.00 41.45 3.34
310 311 1.937391 CCCATCTGCGCTCGAAATC 59.063 57.895 9.73 0.00 0.00 2.17
311 312 2.182842 GCCCATCTGCGCTCGAAAT 61.183 57.895 9.73 0.00 0.00 2.17
312 313 2.819595 GCCCATCTGCGCTCGAAA 60.820 61.111 9.73 0.00 0.00 3.46
313 314 3.723235 GAGCCCATCTGCGCTCGAA 62.723 63.158 9.73 0.00 41.90 3.71
314 315 4.212913 GAGCCCATCTGCGCTCGA 62.213 66.667 9.73 5.59 41.90 4.04
338 339 3.761445 TACCGGAAGCGGCGATTCG 62.761 63.158 28.48 22.66 0.00 3.34
339 340 1.949631 CTACCGGAAGCGGCGATTC 60.950 63.158 27.98 27.98 0.00 2.52
340 341 2.106332 CTACCGGAAGCGGCGATT 59.894 61.111 11.37 11.37 0.00 3.34
341 342 2.718073 AACTACCGGAAGCGGCGAT 61.718 57.895 12.98 0.00 0.00 4.58
342 343 3.376078 AACTACCGGAAGCGGCGA 61.376 61.111 12.98 0.00 0.00 5.54
343 344 3.186047 CAACTACCGGAAGCGGCG 61.186 66.667 9.46 0.51 0.00 6.46
344 345 1.232621 AAACAACTACCGGAAGCGGC 61.233 55.000 9.46 0.00 0.00 6.53
345 346 0.794473 GAAACAACTACCGGAAGCGG 59.206 55.000 9.46 0.00 0.00 5.52
346 347 1.504359 TGAAACAACTACCGGAAGCG 58.496 50.000 9.46 0.00 0.00 4.68
347 348 3.974871 TTTGAAACAACTACCGGAAGC 57.025 42.857 9.46 0.00 0.00 3.86
348 349 5.238006 TGTTTTGAAACAACTACCGGAAG 57.762 39.130 9.46 0.00 45.17 3.46
374 375 9.973661 TCTAATTTTCCAATCAAGTAAGATGGA 57.026 29.630 0.00 0.00 0.00 3.41
438 440 6.934083 GGCATCCAATCTTTTTAAACCTTTCA 59.066 34.615 0.00 0.00 0.00 2.69
444 446 8.250332 TCTATGTGGCATCCAATCTTTTTAAAC 58.750 33.333 0.00 0.00 34.18 2.01
448 450 6.855763 TTCTATGTGGCATCCAATCTTTTT 57.144 33.333 0.00 0.00 34.18 1.94
450 452 5.240183 CGATTCTATGTGGCATCCAATCTTT 59.760 40.000 0.00 0.00 34.18 2.52
452 454 4.040829 TCGATTCTATGTGGCATCCAATCT 59.959 41.667 0.00 0.00 34.18 2.40
453 455 4.153117 GTCGATTCTATGTGGCATCCAATC 59.847 45.833 0.00 0.00 34.18 2.67
467 470 6.761312 TGGGTTCAAGTTTTAGTCGATTCTA 58.239 36.000 0.00 0.00 0.00 2.10
468 471 5.617252 TGGGTTCAAGTTTTAGTCGATTCT 58.383 37.500 0.00 0.00 0.00 2.40
473 476 6.067263 TCATTTGGGTTCAAGTTTTAGTCG 57.933 37.500 0.00 0.00 33.98 4.18
478 481 7.791029 ACACTTATCATTTGGGTTCAAGTTTT 58.209 30.769 0.00 0.00 33.98 2.43
482 485 6.573664 TGACACTTATCATTTGGGTTCAAG 57.426 37.500 0.00 0.00 33.98 3.02
510 513 1.406970 GCTAGAGCGCTTCGTGTCAC 61.407 60.000 13.26 0.00 0.00 3.67
511 514 1.154016 GCTAGAGCGCTTCGTGTCA 60.154 57.895 13.26 0.00 0.00 3.58
512 515 1.874466 GGCTAGAGCGCTTCGTGTC 60.874 63.158 13.26 0.00 43.26 3.67
522 526 0.960861 AAAAACGCCAGGGCTAGAGC 60.961 55.000 8.91 0.00 39.32 4.09
545 549 7.647907 TCCTTTTCGTATGACAACTTTAGTC 57.352 36.000 0.00 0.00 36.55 2.59
556 560 7.149307 GGGATTTGTTTTTCCTTTTCGTATGA 58.851 34.615 0.00 0.00 32.34 2.15
560 564 5.346181 TGGGATTTGTTTTTCCTTTTCGT 57.654 34.783 0.00 0.00 32.34 3.85
561 565 6.670077 TTTGGGATTTGTTTTTCCTTTTCG 57.330 33.333 0.00 0.00 32.34 3.46
568 572 6.676237 TCAGCTTTTTGGGATTTGTTTTTC 57.324 33.333 0.00 0.00 0.00 2.29
569 573 7.176515 AGTTTCAGCTTTTTGGGATTTGTTTTT 59.823 29.630 0.00 0.00 0.00 1.94
578 582 4.282496 TGGTAAGTTTCAGCTTTTTGGGA 58.718 39.130 0.00 0.00 0.00 4.37
586 592 6.262273 TCTTTTCGAAATGGTAAGTTTCAGCT 59.738 34.615 19.99 0.00 35.77 4.24
587 593 6.435428 TCTTTTCGAAATGGTAAGTTTCAGC 58.565 36.000 19.99 0.00 35.77 4.26
597 603 5.262588 AGCAACTTTCTTTTCGAAATGGT 57.737 34.783 19.99 12.56 40.62 3.55
603 609 7.439955 TGTCAAGTATAGCAACTTTCTTTTCGA 59.560 33.333 0.00 0.00 37.61 3.71
604 610 7.572759 TGTCAAGTATAGCAACTTTCTTTTCG 58.427 34.615 0.00 0.00 37.61 3.46
605 611 9.170584 GTTGTCAAGTATAGCAACTTTCTTTTC 57.829 33.333 0.00 0.00 37.61 2.29
618 624 7.667043 TGGCAGTTTTAGTTGTCAAGTATAG 57.333 36.000 0.91 0.00 0.00 1.31
622 628 4.278419 GGATGGCAGTTTTAGTTGTCAAGT 59.722 41.667 0.00 0.00 31.98 3.16
637 643 3.627395 TTAGTAACACAGGGATGGCAG 57.373 47.619 0.00 0.00 0.00 4.85
640 646 5.116882 GCTAGTTTAGTAACACAGGGATGG 58.883 45.833 0.00 0.00 36.70 3.51
672 678 4.564769 ACAAACACATGGCAACTTTAAACG 59.435 37.500 0.00 0.00 37.61 3.60
677 683 3.260740 CACACAAACACATGGCAACTTT 58.739 40.909 0.00 0.00 37.61 2.66
678 684 2.418471 CCACACAAACACATGGCAACTT 60.418 45.455 0.00 0.00 37.61 2.66
684 690 2.529780 AATGCCACACAAACACATGG 57.470 45.000 0.00 0.00 35.17 3.66
688 694 5.288804 ACTTGATAAATGCCACACAAACAC 58.711 37.500 0.00 0.00 0.00 3.32
690 696 6.364976 GGTAACTTGATAAATGCCACACAAAC 59.635 38.462 0.00 0.00 0.00 2.93
693 699 5.073428 TGGTAACTTGATAAATGCCACACA 58.927 37.500 0.00 0.00 37.61 3.72
700 715 5.505780 TGGACCCTGGTAACTTGATAAATG 58.494 41.667 0.00 0.00 37.61 2.32
701 716 5.789574 TGGACCCTGGTAACTTGATAAAT 57.210 39.130 0.00 0.00 37.61 1.40
702 717 5.073965 ACTTGGACCCTGGTAACTTGATAAA 59.926 40.000 0.00 0.00 37.61 1.40
712 727 3.955524 TTTCAAACTTGGACCCTGGTA 57.044 42.857 0.00 0.00 0.00 3.25
714 729 2.763448 TGTTTTCAAACTTGGACCCTGG 59.237 45.455 4.14 0.00 39.59 4.45
725 740 5.099575 CGGCCCTTATACATGTTTTCAAAC 58.900 41.667 2.30 0.00 39.33 2.93
728 743 3.692101 CACGGCCCTTATACATGTTTTCA 59.308 43.478 2.30 0.00 0.00 2.69
729 744 3.488553 GCACGGCCCTTATACATGTTTTC 60.489 47.826 2.30 0.00 0.00 2.29
777 792 6.791775 GCGTTTGCTCAAAAGAAAATATTTGG 59.208 34.615 11.42 0.00 37.19 3.28
788 808 2.016165 GGGCGCGTTTGCTCAAAAG 61.016 57.895 8.43 4.34 39.65 2.27
795 815 4.811761 GATGACGGGCGCGTTTGC 62.812 66.667 30.06 17.62 37.91 3.68
796 816 3.118454 AGATGACGGGCGCGTTTG 61.118 61.111 30.06 0.43 0.00 2.93
800 820 4.812476 TTCCAGATGACGGGCGCG 62.812 66.667 22.69 22.69 0.00 6.86
817 837 2.102070 TTGACGTGTTGACTGTGGTT 57.898 45.000 0.00 0.00 0.00 3.67
822 844 2.223226 TGTTGCATTGACGTGTTGACTG 60.223 45.455 0.00 0.00 0.00 3.51
862 884 4.735132 TGGCTGCCTCACGTACGC 62.735 66.667 21.03 0.00 0.00 4.42
880 902 6.763610 GGACTAATGGTCTTCATTTCTACTGG 59.236 42.308 0.00 0.00 43.04 4.00
881 903 7.331026 TGGACTAATGGTCTTCATTTCTACTG 58.669 38.462 0.00 0.00 43.04 2.74
883 905 7.987458 TGATGGACTAATGGTCTTCATTTCTAC 59.013 37.037 0.00 0.00 43.04 2.59
884 906 8.089625 TGATGGACTAATGGTCTTCATTTCTA 57.910 34.615 0.00 0.00 43.04 2.10
930 1031 1.580942 TGCCGCAGCAGTTTGATTC 59.419 52.632 0.00 0.00 46.52 2.52
994 1095 2.610374 TCGCGGCAATTTATAGTGTTCC 59.390 45.455 6.13 0.00 0.00 3.62
1043 1156 3.795688 AACTTTGATGAGGAAGGAGCA 57.204 42.857 0.00 0.00 0.00 4.26
1129 1377 1.222766 CCGAGCATGATGAGCTGAGC 61.223 60.000 0.00 0.00 43.58 4.26
1130 1378 1.222766 GCCGAGCATGATGAGCTGAG 61.223 60.000 0.00 0.00 43.58 3.35
1131 1379 1.227468 GCCGAGCATGATGAGCTGA 60.227 57.895 0.00 0.00 43.58 4.26
1132 1380 2.252346 GGCCGAGCATGATGAGCTG 61.252 63.158 0.00 0.00 43.58 4.24
1133 1381 1.980784 AAGGCCGAGCATGATGAGCT 61.981 55.000 0.00 0.00 46.82 4.09
1377 1631 4.444838 CCCGTCCGGCGATGAACA 62.445 66.667 17.96 0.00 44.77 3.18
1869 2123 3.254166 AGCCTCAGCCGCATTATAAATTG 59.746 43.478 0.00 0.00 41.25 2.32
1872 2126 2.221169 CAGCCTCAGCCGCATTATAAA 58.779 47.619 0.00 0.00 41.25 1.40
1875 2129 1.895707 GCAGCCTCAGCCGCATTAT 60.896 57.895 0.00 0.00 42.28 1.28
1876 2130 2.514592 GCAGCCTCAGCCGCATTA 60.515 61.111 0.00 0.00 42.28 1.90
1889 2143 3.479255 AAAAAGCTAAGCACGCAGC 57.521 47.368 0.00 0.00 46.19 5.25
1904 2158 4.640789 AACTCACGCCAACACATAAAAA 57.359 36.364 0.00 0.00 0.00 1.94
1905 2159 4.096532 TCAAACTCACGCCAACACATAAAA 59.903 37.500 0.00 0.00 0.00 1.52
1906 2160 3.628032 TCAAACTCACGCCAACACATAAA 59.372 39.130 0.00 0.00 0.00 1.40
1907 2161 3.206964 TCAAACTCACGCCAACACATAA 58.793 40.909 0.00 0.00 0.00 1.90
1908 2162 2.839975 TCAAACTCACGCCAACACATA 58.160 42.857 0.00 0.00 0.00 2.29
1909 2163 1.674359 TCAAACTCACGCCAACACAT 58.326 45.000 0.00 0.00 0.00 3.21
1910 2164 1.674359 ATCAAACTCACGCCAACACA 58.326 45.000 0.00 0.00 0.00 3.72
1911 2165 3.002862 TGTTATCAAACTCACGCCAACAC 59.997 43.478 0.00 0.00 36.51 3.32
1912 2166 3.206964 TGTTATCAAACTCACGCCAACA 58.793 40.909 0.00 0.00 36.51 3.33
1913 2167 3.889196 TGTTATCAAACTCACGCCAAC 57.111 42.857 0.00 0.00 36.51 3.77
1914 2168 3.818210 ACATGTTATCAAACTCACGCCAA 59.182 39.130 0.00 0.00 36.51 4.52
1915 2169 3.407698 ACATGTTATCAAACTCACGCCA 58.592 40.909 0.00 0.00 36.51 5.69
1916 2170 5.501715 CATACATGTTATCAAACTCACGCC 58.498 41.667 2.30 0.00 36.51 5.68
1917 2171 5.293324 TCCATACATGTTATCAAACTCACGC 59.707 40.000 2.30 0.00 36.51 5.34
1918 2172 6.312672 TGTCCATACATGTTATCAAACTCACG 59.687 38.462 2.30 0.00 36.51 4.35
1919 2173 7.609760 TGTCCATACATGTTATCAAACTCAC 57.390 36.000 2.30 0.00 36.51 3.51
1934 2188 4.458642 CACCACACAAATCATGTCCATACA 59.541 41.667 0.00 0.00 41.46 2.29
1935 2189 4.142403 CCACCACACAAATCATGTCCATAC 60.142 45.833 0.00 0.00 41.46 2.39
1936 2190 4.015764 CCACCACACAAATCATGTCCATA 58.984 43.478 0.00 0.00 41.46 2.74
1937 2191 2.827322 CCACCACACAAATCATGTCCAT 59.173 45.455 0.00 0.00 41.46 3.41
1938 2192 2.237643 CCACCACACAAATCATGTCCA 58.762 47.619 0.00 0.00 41.46 4.02
1939 2193 2.228822 GACCACCACACAAATCATGTCC 59.771 50.000 0.00 0.00 41.46 4.02
1940 2194 2.228822 GGACCACCACACAAATCATGTC 59.771 50.000 0.00 0.00 36.72 3.06
1941 2195 2.158475 AGGACCACCACACAAATCATGT 60.158 45.455 0.00 0.00 40.09 3.21
1942 2196 2.229543 CAGGACCACCACACAAATCATG 59.770 50.000 0.00 0.00 38.94 3.07
1943 2197 2.158475 ACAGGACCACCACACAAATCAT 60.158 45.455 0.00 0.00 38.94 2.45
1944 2198 1.214175 ACAGGACCACCACACAAATCA 59.786 47.619 0.00 0.00 38.94 2.57
1945 2199 1.981256 ACAGGACCACCACACAAATC 58.019 50.000 0.00 0.00 38.94 2.17
1946 2200 2.031120 CAACAGGACCACCACACAAAT 58.969 47.619 0.00 0.00 38.94 2.32
1947 2201 1.468985 CAACAGGACCACCACACAAA 58.531 50.000 0.00 0.00 38.94 2.83
1948 2202 1.034838 GCAACAGGACCACCACACAA 61.035 55.000 0.00 0.00 38.94 3.33
1949 2203 1.453015 GCAACAGGACCACCACACA 60.453 57.895 0.00 0.00 38.94 3.72
1950 2204 0.751643 AAGCAACAGGACCACCACAC 60.752 55.000 0.00 0.00 38.94 3.82
1951 2205 0.033601 AAAGCAACAGGACCACCACA 60.034 50.000 0.00 0.00 38.94 4.17
1952 2206 0.668535 GAAAGCAACAGGACCACCAC 59.331 55.000 0.00 0.00 38.94 4.16
1953 2207 0.257328 TGAAAGCAACAGGACCACCA 59.743 50.000 0.00 0.00 38.94 4.17
1954 2208 1.620822 ATGAAAGCAACAGGACCACC 58.379 50.000 0.00 0.00 0.00 4.61
1955 2209 4.702131 AGATAATGAAAGCAACAGGACCAC 59.298 41.667 0.00 0.00 0.00 4.16
1956 2210 4.922206 AGATAATGAAAGCAACAGGACCA 58.078 39.130 0.00 0.00 0.00 4.02
1957 2211 5.904362 AAGATAATGAAAGCAACAGGACC 57.096 39.130 0.00 0.00 0.00 4.46
1958 2212 9.691362 TTTTAAAGATAATGAAAGCAACAGGAC 57.309 29.630 0.00 0.00 0.00 3.85
1965 2219 9.651913 GGTTCCATTTTAAAGATAATGAAAGCA 57.348 29.630 0.00 0.00 34.44 3.91
1966 2220 8.807581 CGGTTCCATTTTAAAGATAATGAAAGC 58.192 33.333 0.00 0.00 34.44 3.51
1967 2221 9.301153 CCGGTTCCATTTTAAAGATAATGAAAG 57.699 33.333 0.00 0.00 34.44 2.62
1968 2222 8.254508 CCCGGTTCCATTTTAAAGATAATGAAA 58.745 33.333 0.00 0.00 34.44 2.69
1969 2223 7.616150 TCCCGGTTCCATTTTAAAGATAATGAA 59.384 33.333 0.00 0.00 34.44 2.57
1970 2224 7.120051 TCCCGGTTCCATTTTAAAGATAATGA 58.880 34.615 0.00 0.00 34.44 2.57
1971 2225 7.341445 TCCCGGTTCCATTTTAAAGATAATG 57.659 36.000 0.00 0.00 0.00 1.90
1972 2226 7.837187 TCTTCCCGGTTCCATTTTAAAGATAAT 59.163 33.333 0.00 0.00 0.00 1.28
1973 2227 7.176490 TCTTCCCGGTTCCATTTTAAAGATAA 58.824 34.615 0.00 0.00 0.00 1.75
1974 2228 6.723339 TCTTCCCGGTTCCATTTTAAAGATA 58.277 36.000 0.00 0.00 0.00 1.98
1975 2229 5.576128 TCTTCCCGGTTCCATTTTAAAGAT 58.424 37.500 0.00 0.00 0.00 2.40
1976 2230 4.988029 TCTTCCCGGTTCCATTTTAAAGA 58.012 39.130 0.00 0.00 0.00 2.52
1977 2231 5.417580 TCATCTTCCCGGTTCCATTTTAAAG 59.582 40.000 0.00 0.00 0.00 1.85
1978 2232 5.326069 TCATCTTCCCGGTTCCATTTTAAA 58.674 37.500 0.00 0.00 0.00 1.52
1979 2233 4.924625 TCATCTTCCCGGTTCCATTTTAA 58.075 39.130 0.00 0.00 0.00 1.52
1980 2234 4.577988 TCATCTTCCCGGTTCCATTTTA 57.422 40.909 0.00 0.00 0.00 1.52
1981 2235 3.449746 TCATCTTCCCGGTTCCATTTT 57.550 42.857 0.00 0.00 0.00 1.82
1982 2236 3.555966 GATCATCTTCCCGGTTCCATTT 58.444 45.455 0.00 0.00 0.00 2.32
1983 2237 2.158608 GGATCATCTTCCCGGTTCCATT 60.159 50.000 0.00 0.00 0.00 3.16
1984 2238 1.421646 GGATCATCTTCCCGGTTCCAT 59.578 52.381 0.00 0.00 0.00 3.41
1985 2239 0.837272 GGATCATCTTCCCGGTTCCA 59.163 55.000 0.00 0.00 0.00 3.53
1986 2240 0.108774 GGGATCATCTTCCCGGTTCC 59.891 60.000 0.00 0.00 45.84 3.62
1987 2241 3.708013 GGGATCATCTTCCCGGTTC 57.292 57.895 0.00 0.00 45.84 3.62
1993 2247 8.525290 TTTTAGAAAATCAGGGATCATCTTCC 57.475 34.615 0.00 0.00 34.83 3.46
2021 2275 6.453926 AATTCAAATTGCAGCCAACTTTTT 57.546 29.167 0.00 0.00 32.95 1.94
2022 2276 6.267070 CAAATTCAAATTGCAGCCAACTTTT 58.733 32.000 0.00 0.00 32.95 2.27
2023 2277 5.221087 CCAAATTCAAATTGCAGCCAACTTT 60.221 36.000 0.00 0.00 32.95 2.66
2024 2278 4.276431 CCAAATTCAAATTGCAGCCAACTT 59.724 37.500 0.00 0.00 32.95 2.66
2025 2279 3.816523 CCAAATTCAAATTGCAGCCAACT 59.183 39.130 0.00 0.00 32.95 3.16
2026 2280 3.058085 CCCAAATTCAAATTGCAGCCAAC 60.058 43.478 0.00 0.00 32.95 3.77
2027 2281 3.147629 CCCAAATTCAAATTGCAGCCAA 58.852 40.909 0.00 0.00 35.01 4.52
2028 2282 2.780714 CCCAAATTCAAATTGCAGCCA 58.219 42.857 0.00 0.00 0.00 4.75
2029 2283 1.469703 GCCCAAATTCAAATTGCAGCC 59.530 47.619 0.00 0.00 0.00 4.85
2030 2284 1.469703 GGCCCAAATTCAAATTGCAGC 59.530 47.619 0.00 0.00 0.00 5.25
2031 2285 2.745281 CTGGCCCAAATTCAAATTGCAG 59.255 45.455 0.00 0.00 0.00 4.41
2032 2286 2.106166 ACTGGCCCAAATTCAAATTGCA 59.894 40.909 0.00 0.00 0.00 4.08
2033 2287 2.743664 GACTGGCCCAAATTCAAATTGC 59.256 45.455 0.00 0.00 0.00 3.56
2034 2288 4.005487 TGACTGGCCCAAATTCAAATTG 57.995 40.909 0.00 0.00 0.00 2.32
2035 2289 4.703379 TTGACTGGCCCAAATTCAAATT 57.297 36.364 0.00 0.00 0.00 1.82
2036 2290 4.914177 ATTGACTGGCCCAAATTCAAAT 57.086 36.364 0.00 0.00 30.34 2.32
2037 2291 4.703379 AATTGACTGGCCCAAATTCAAA 57.297 36.364 0.00 0.00 30.34 2.69
2038 2292 4.703379 AAATTGACTGGCCCAAATTCAA 57.297 36.364 0.00 1.99 0.00 2.69
2039 2293 4.703379 AAAATTGACTGGCCCAAATTCA 57.297 36.364 0.00 0.00 0.00 2.57
2040 2294 5.308014 AGAAAAATTGACTGGCCCAAATTC 58.692 37.500 0.00 4.75 0.00 2.17
2041 2295 5.308014 GAGAAAAATTGACTGGCCCAAATT 58.692 37.500 0.00 0.00 0.00 1.82
2042 2296 4.263025 GGAGAAAAATTGACTGGCCCAAAT 60.263 41.667 0.00 0.00 0.00 2.32
2043 2297 3.070878 GGAGAAAAATTGACTGGCCCAAA 59.929 43.478 0.00 0.00 0.00 3.28
2044 2298 2.632512 GGAGAAAAATTGACTGGCCCAA 59.367 45.455 0.00 0.00 0.00 4.12
2045 2299 2.247358 GGAGAAAAATTGACTGGCCCA 58.753 47.619 0.00 0.00 0.00 5.36
2046 2300 1.550524 GGGAGAAAAATTGACTGGCCC 59.449 52.381 0.00 0.00 0.00 5.80
2047 2301 2.232208 CTGGGAGAAAAATTGACTGGCC 59.768 50.000 0.00 0.00 0.00 5.36
2048 2302 2.893489 ACTGGGAGAAAAATTGACTGGC 59.107 45.455 0.00 0.00 0.00 4.85
2049 2303 4.584325 TCAACTGGGAGAAAAATTGACTGG 59.416 41.667 0.00 0.00 0.00 4.00
2050 2304 5.772825 TCAACTGGGAGAAAAATTGACTG 57.227 39.130 0.00 0.00 0.00 3.51
2051 2305 6.324770 ACAATCAACTGGGAGAAAAATTGACT 59.675 34.615 0.00 0.00 0.00 3.41
2052 2306 6.515832 ACAATCAACTGGGAGAAAAATTGAC 58.484 36.000 0.00 0.00 0.00 3.18
2053 2307 6.729690 ACAATCAACTGGGAGAAAAATTGA 57.270 33.333 0.00 0.00 0.00 2.57
2054 2308 6.293027 GCAACAATCAACTGGGAGAAAAATTG 60.293 38.462 0.00 0.00 0.00 2.32
2055 2309 5.759763 GCAACAATCAACTGGGAGAAAAATT 59.240 36.000 0.00 0.00 0.00 1.82
2056 2310 5.070847 AGCAACAATCAACTGGGAGAAAAAT 59.929 36.000 0.00 0.00 0.00 1.82
2057 2311 4.405358 AGCAACAATCAACTGGGAGAAAAA 59.595 37.500 0.00 0.00 0.00 1.94
2058 2312 3.960102 AGCAACAATCAACTGGGAGAAAA 59.040 39.130 0.00 0.00 0.00 2.29
2059 2313 3.565307 AGCAACAATCAACTGGGAGAAA 58.435 40.909 0.00 0.00 0.00 2.52
2060 2314 3.149196 GAGCAACAATCAACTGGGAGAA 58.851 45.455 0.00 0.00 0.00 2.87
2061 2315 2.373169 AGAGCAACAATCAACTGGGAGA 59.627 45.455 0.00 0.00 0.00 3.71
2062 2316 2.787994 AGAGCAACAATCAACTGGGAG 58.212 47.619 0.00 0.00 0.00 4.30
2063 2317 2.957402 AGAGCAACAATCAACTGGGA 57.043 45.000 0.00 0.00 0.00 4.37
2064 2318 4.326826 TCTTAGAGCAACAATCAACTGGG 58.673 43.478 0.00 0.00 0.00 4.45
2065 2319 6.506500 AATCTTAGAGCAACAATCAACTGG 57.493 37.500 0.00 0.00 0.00 4.00
2066 2320 7.325338 CACAAATCTTAGAGCAACAATCAACTG 59.675 37.037 0.00 0.00 0.00 3.16
2067 2321 7.365741 CACAAATCTTAGAGCAACAATCAACT 58.634 34.615 0.00 0.00 0.00 3.16
2068 2322 6.088616 GCACAAATCTTAGAGCAACAATCAAC 59.911 38.462 0.00 0.00 0.00 3.18
2069 2323 6.016024 AGCACAAATCTTAGAGCAACAATCAA 60.016 34.615 0.00 0.00 0.00 2.57
2070 2324 5.474532 AGCACAAATCTTAGAGCAACAATCA 59.525 36.000 0.00 0.00 0.00 2.57
2071 2325 5.947443 AGCACAAATCTTAGAGCAACAATC 58.053 37.500 0.00 0.00 0.00 2.67
2072 2326 5.972107 AGCACAAATCTTAGAGCAACAAT 57.028 34.783 0.00 0.00 0.00 2.71
2073 2327 6.654582 TGATAGCACAAATCTTAGAGCAACAA 59.345 34.615 0.00 0.00 0.00 2.83
2074 2328 6.172630 TGATAGCACAAATCTTAGAGCAACA 58.827 36.000 0.00 0.00 0.00 3.33
2075 2329 6.668541 TGATAGCACAAATCTTAGAGCAAC 57.331 37.500 0.00 0.00 0.00 4.17
2076 2330 7.870509 AATGATAGCACAAATCTTAGAGCAA 57.129 32.000 0.00 0.00 0.00 3.91
2077 2331 7.870509 AAATGATAGCACAAATCTTAGAGCA 57.129 32.000 0.00 0.00 0.00 4.26
2125 2379 2.438411 AGTCACCACACAACGGAAAAA 58.562 42.857 0.00 0.00 0.00 1.94
2126 2380 2.116827 AGTCACCACACAACGGAAAA 57.883 45.000 0.00 0.00 0.00 2.29
2127 2381 1.740585 CAAGTCACCACACAACGGAAA 59.259 47.619 0.00 0.00 0.00 3.13
2128 2382 1.339247 ACAAGTCACCACACAACGGAA 60.339 47.619 0.00 0.00 0.00 4.30
2129 2383 0.250793 ACAAGTCACCACACAACGGA 59.749 50.000 0.00 0.00 0.00 4.69
2130 2384 1.091537 AACAAGTCACCACACAACGG 58.908 50.000 0.00 0.00 0.00 4.44
2131 2385 2.911819 AAACAAGTCACCACACAACG 57.088 45.000 0.00 0.00 0.00 4.10
2132 2386 4.165779 CTCAAAACAAGTCACCACACAAC 58.834 43.478 0.00 0.00 0.00 3.32
2133 2387 3.366883 GCTCAAAACAAGTCACCACACAA 60.367 43.478 0.00 0.00 0.00 3.33
2134 2388 2.163412 GCTCAAAACAAGTCACCACACA 59.837 45.455 0.00 0.00 0.00 3.72
2135 2389 2.423538 AGCTCAAAACAAGTCACCACAC 59.576 45.455 0.00 0.00 0.00 3.82
2136 2390 2.423185 CAGCTCAAAACAAGTCACCACA 59.577 45.455 0.00 0.00 0.00 4.17
2137 2391 2.682856 TCAGCTCAAAACAAGTCACCAC 59.317 45.455 0.00 0.00 0.00 4.16
2138 2392 2.945008 CTCAGCTCAAAACAAGTCACCA 59.055 45.455 0.00 0.00 0.00 4.17
2139 2393 3.002759 GTCTCAGCTCAAAACAAGTCACC 59.997 47.826 0.00 0.00 0.00 4.02
2140 2394 3.873952 AGTCTCAGCTCAAAACAAGTCAC 59.126 43.478 0.00 0.00 0.00 3.67
2141 2395 4.142609 AGTCTCAGCTCAAAACAAGTCA 57.857 40.909 0.00 0.00 0.00 3.41
2142 2396 5.491635 AAAGTCTCAGCTCAAAACAAGTC 57.508 39.130 0.00 0.00 0.00 3.01
2143 2397 6.823689 TCTTAAAGTCTCAGCTCAAAACAAGT 59.176 34.615 0.00 0.00 0.00 3.16
2144 2398 7.011857 AGTCTTAAAGTCTCAGCTCAAAACAAG 59.988 37.037 0.00 0.00 0.00 3.16
2145 2399 6.823689 AGTCTTAAAGTCTCAGCTCAAAACAA 59.176 34.615 0.00 0.00 0.00 2.83
2146 2400 6.349300 AGTCTTAAAGTCTCAGCTCAAAACA 58.651 36.000 0.00 0.00 0.00 2.83
2147 2401 6.852858 AGTCTTAAAGTCTCAGCTCAAAAC 57.147 37.500 0.00 0.00 0.00 2.43
2148 2402 7.441458 GGTTAGTCTTAAAGTCTCAGCTCAAAA 59.559 37.037 0.00 0.00 0.00 2.44
2149 2403 6.929606 GGTTAGTCTTAAAGTCTCAGCTCAAA 59.070 38.462 0.00 0.00 0.00 2.69
2150 2404 6.267928 AGGTTAGTCTTAAAGTCTCAGCTCAA 59.732 38.462 0.00 0.00 0.00 3.02
2151 2405 5.775701 AGGTTAGTCTTAAAGTCTCAGCTCA 59.224 40.000 0.00 0.00 0.00 4.26
2152 2406 6.152154 AGAGGTTAGTCTTAAAGTCTCAGCTC 59.848 42.308 0.00 0.00 34.60 4.09
2153 2407 6.014012 AGAGGTTAGTCTTAAAGTCTCAGCT 58.986 40.000 0.00 0.00 0.00 4.24
2154 2408 6.275494 AGAGGTTAGTCTTAAAGTCTCAGC 57.725 41.667 0.00 0.00 0.00 4.26
2155 2409 9.179909 TCATAGAGGTTAGTCTTAAAGTCTCAG 57.820 37.037 0.00 0.00 0.00 3.35
2156 2410 9.702253 ATCATAGAGGTTAGTCTTAAAGTCTCA 57.298 33.333 0.00 0.00 0.00 3.27
2157 2411 9.959749 CATCATAGAGGTTAGTCTTAAAGTCTC 57.040 37.037 0.00 0.00 0.00 3.36
2158 2412 8.417884 GCATCATAGAGGTTAGTCTTAAAGTCT 58.582 37.037 0.00 0.00 0.00 3.24
2159 2413 8.198109 TGCATCATAGAGGTTAGTCTTAAAGTC 58.802 37.037 0.00 0.00 0.00 3.01
2160 2414 8.079211 TGCATCATAGAGGTTAGTCTTAAAGT 57.921 34.615 0.00 0.00 0.00 2.66
2161 2415 9.553064 AATGCATCATAGAGGTTAGTCTTAAAG 57.447 33.333 0.00 0.00 0.00 1.85
2162 2416 9.905713 AAATGCATCATAGAGGTTAGTCTTAAA 57.094 29.630 0.00 0.00 0.00 1.52
2165 2419 8.709308 ACTAAATGCATCATAGAGGTTAGTCTT 58.291 33.333 20.46 1.49 0.00 3.01
2166 2420 8.256356 ACTAAATGCATCATAGAGGTTAGTCT 57.744 34.615 20.46 0.00 0.00 3.24
2167 2421 8.144478 TGACTAAATGCATCATAGAGGTTAGTC 58.856 37.037 24.06 24.06 43.10 2.59
2168 2422 8.023021 TGACTAAATGCATCATAGAGGTTAGT 57.977 34.615 20.46 17.00 34.21 2.24
2169 2423 8.893219 TTGACTAAATGCATCATAGAGGTTAG 57.107 34.615 20.46 14.56 0.00 2.34
2171 2425 9.277783 GTATTGACTAAATGCATCATAGAGGTT 57.722 33.333 20.46 4.31 31.64 3.50
2172 2426 7.880195 GGTATTGACTAAATGCATCATAGAGGT 59.120 37.037 20.46 5.99 32.86 3.85
2173 2427 8.099537 AGGTATTGACTAAATGCATCATAGAGG 58.900 37.037 20.46 3.37 32.86 3.69
2174 2428 9.499479 AAGGTATTGACTAAATGCATCATAGAG 57.501 33.333 20.46 8.47 32.86 2.43
2178 2432 8.559536 CGTTAAGGTATTGACTAAATGCATCAT 58.440 33.333 0.00 0.00 32.86 2.45
2179 2433 7.011950 CCGTTAAGGTATTGACTAAATGCATCA 59.988 37.037 0.00 0.00 32.86 3.07
2180 2434 7.352739 CCGTTAAGGTATTGACTAAATGCATC 58.647 38.462 0.00 0.00 32.86 3.91
2181 2435 6.262273 CCCGTTAAGGTATTGACTAAATGCAT 59.738 38.462 0.00 0.00 38.74 3.96
2182 2436 5.587043 CCCGTTAAGGTATTGACTAAATGCA 59.413 40.000 0.00 0.00 38.74 3.96
2183 2437 5.008316 CCCCGTTAAGGTATTGACTAAATGC 59.992 44.000 0.00 0.00 38.74 3.56
2184 2438 5.008316 GCCCCGTTAAGGTATTGACTAAATG 59.992 44.000 0.00 0.00 38.74 2.32
2185 2439 5.128205 GCCCCGTTAAGGTATTGACTAAAT 58.872 41.667 0.00 0.00 38.74 1.40
2186 2440 4.516323 GCCCCGTTAAGGTATTGACTAAA 58.484 43.478 0.00 0.00 38.74 1.85
2187 2441 3.430651 CGCCCCGTTAAGGTATTGACTAA 60.431 47.826 0.00 0.00 38.74 2.24
2188 2442 2.101249 CGCCCCGTTAAGGTATTGACTA 59.899 50.000 0.00 0.00 38.74 2.59
2189 2443 1.134610 CGCCCCGTTAAGGTATTGACT 60.135 52.381 0.00 0.00 38.74 3.41
2190 2444 1.134729 TCGCCCCGTTAAGGTATTGAC 60.135 52.381 0.00 0.00 38.74 3.18
2191 2445 1.137479 CTCGCCCCGTTAAGGTATTGA 59.863 52.381 0.00 0.00 38.74 2.57
2192 2446 1.578583 CTCGCCCCGTTAAGGTATTG 58.421 55.000 0.00 0.00 38.74 1.90
2193 2447 0.466963 CCTCGCCCCGTTAAGGTATT 59.533 55.000 0.00 0.00 38.74 1.89
2194 2448 2.036428 GCCTCGCCCCGTTAAGGTAT 62.036 60.000 0.00 0.00 38.74 2.73
2195 2449 2.724273 GCCTCGCCCCGTTAAGGTA 61.724 63.158 0.00 0.00 38.74 3.08
2196 2450 4.091939 GCCTCGCCCCGTTAAGGT 62.092 66.667 0.00 0.00 38.74 3.50
2197 2451 4.851179 GGCCTCGCCCCGTTAAGG 62.851 72.222 0.00 0.00 44.06 2.69
2207 2461 1.828224 CCCAATTAAGGGGCCTCGC 60.828 63.158 0.84 0.00 45.60 5.03
2208 2462 4.579127 CCCAATTAAGGGGCCTCG 57.421 61.111 0.84 0.00 45.60 4.63
2222 2476 1.002134 GAGCTAGCTTGGTTGCCCA 60.002 57.895 20.42 0.00 39.65 5.36
2223 2477 0.541863 TAGAGCTAGCTTGGTTGCCC 59.458 55.000 20.42 2.94 0.00 5.36
2224 2478 1.946745 CTAGAGCTAGCTTGGTTGCC 58.053 55.000 20.42 3.76 0.00 4.52
2244 2498 6.614580 GCGCTCGTTAATTAATTGCTCTCTAG 60.615 42.308 11.05 1.28 0.00 2.43
2245 2499 5.175126 GCGCTCGTTAATTAATTGCTCTCTA 59.825 40.000 11.05 0.00 0.00 2.43
2246 2500 4.025647 GCGCTCGTTAATTAATTGCTCTCT 60.026 41.667 11.05 0.00 0.00 3.10
2312 2566 3.220940 TGACATGTGACAAATGGCTGAA 58.779 40.909 12.82 0.00 33.91 3.02
2322 2576 2.480037 GTCGAAAGCATGACATGTGACA 59.520 45.455 16.62 0.00 35.20 3.58
2324 2578 1.726248 CGTCGAAAGCATGACATGTGA 59.274 47.619 16.62 0.00 34.78 3.58
2333 2587 1.153549 GAGGGAGCGTCGAAAGCAT 60.154 57.895 15.22 2.26 37.01 3.79
2382 2637 2.600320 CGTTTAAAAAGCCGAGAACGCA 60.600 45.455 0.00 0.00 38.29 5.24
2388 2643 4.207635 GGAAAAACCGTTTAAAAAGCCGAG 59.792 41.667 0.00 0.00 0.00 4.63
2391 2646 4.508861 GGAGGAAAAACCGTTTAAAAAGCC 59.491 41.667 0.00 0.00 44.74 4.35
2420 2675 6.714492 GGTAGAAAACCTAAACGTCGAAAAA 58.286 36.000 0.00 0.00 45.75 1.94
2441 2696 3.167485 TGAAAGCTAAGGAAGACCGGTA 58.833 45.455 7.34 0.00 41.83 4.02
2498 2760 1.738099 GCACAACCGCGACTCTCAT 60.738 57.895 8.23 0.00 0.00 2.90
2507 2769 0.793861 TATCGTGAAAGCACAACCGC 59.206 50.000 0.00 0.00 45.41 5.68
2521 2783 0.102481 GGCACGTCCATGACTATCGT 59.898 55.000 0.00 0.00 35.12 3.73
2525 2787 1.621317 TGAAAGGCACGTCCATGACTA 59.379 47.619 0.00 0.00 36.73 2.59
2531 2793 1.202200 CGTTTTTGAAAGGCACGTCCA 60.202 47.619 6.78 0.00 37.29 4.02
2534 2796 2.923605 TTCGTTTTTGAAAGGCACGT 57.076 40.000 6.36 0.00 32.65 4.49
2569 2832 0.747283 GTACCTCTCGCGGAAGGAGA 60.747 60.000 27.36 13.35 38.18 3.71
2570 2833 1.728672 GTACCTCTCGCGGAAGGAG 59.271 63.158 27.36 18.73 0.00 3.69
2670 2961 2.634982 TCACGGAAGCAAAATCATGC 57.365 45.000 0.00 0.00 46.78 4.06
2673 2964 2.288152 GCCTTTCACGGAAGCAAAATCA 60.288 45.455 0.00 0.00 0.00 2.57
2675 2966 1.686052 TGCCTTTCACGGAAGCAAAAT 59.314 42.857 0.00 0.00 0.00 1.82
2677 2968 0.383949 GTGCCTTTCACGGAAGCAAA 59.616 50.000 0.00 0.00 35.76 3.68
2678 2969 2.029743 GTGCCTTTCACGGAAGCAA 58.970 52.632 0.00 0.00 35.76 3.91
2679 2970 3.744559 GTGCCTTTCACGGAAGCA 58.255 55.556 0.00 0.00 35.76 3.91
2856 3170 2.040544 AAAACTGGGCATCTCGCGG 61.041 57.895 6.13 0.00 43.84 6.46
2858 3172 1.153958 GCAAAACTGGGCATCTCGC 60.154 57.895 0.00 0.00 41.28 5.03
2864 3178 3.442441 CGGAAGCAAAACTGGGCA 58.558 55.556 0.00 0.00 0.00 5.36
2975 3317 2.010817 CTCGCAAAAGCACAACCGC 61.011 57.895 0.00 0.00 0.00 5.68



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.