Multiple sequence alignment - TraesCS7A01G369600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G369600 chr7A 100.000 4167 0 0 1 4167 543068342 543064176 0.000000e+00 7696.0
1 TraesCS7A01G369600 chr7A 96.086 511 20 0 3657 4167 576299651 576300161 0.000000e+00 833.0
2 TraesCS7A01G369600 chr7A 95.898 512 20 1 3656 4167 680725985 680726495 0.000000e+00 828.0
3 TraesCS7A01G369600 chr7D 93.796 2305 105 20 1124 3398 457184625 457186921 0.000000e+00 3430.0
4 TraesCS7A01G369600 chr7D 93.512 2204 102 21 1265 3442 201196087 201193899 0.000000e+00 3240.0
5 TraesCS7A01G369600 chr7D 87.634 655 65 10 291 937 91748422 91749068 0.000000e+00 747.0
6 TraesCS7A01G369600 chr7D 93.878 49 3 0 186 234 201196745 201196697 1.610000e-09 75.0
7 TraesCS7A01G369600 chr7D 90.741 54 5 0 192 245 457184091 457184144 5.780000e-09 73.1
8 TraesCS7A01G369600 chr7B 92.619 2371 103 29 1105 3442 479491673 479494004 0.000000e+00 3343.0
9 TraesCS7A01G369600 chr7B 95.833 48 2 0 187 234 479491509 479491556 1.240000e-10 78.7
10 TraesCS7A01G369600 chr3A 97.065 511 15 0 3657 4167 196853532 196853022 0.000000e+00 861.0
11 TraesCS7A01G369600 chr3A 96.869 511 16 0 3657 4167 734400327 734399817 0.000000e+00 856.0
12 TraesCS7A01G369600 chr3A 86.269 670 86 3 274 937 584028642 584027973 0.000000e+00 723.0
13 TraesCS7A01G369600 chr2A 97.065 511 15 0 3657 4167 617787607 617787097 0.000000e+00 861.0
14 TraesCS7A01G369600 chr2A 96.869 511 16 0 3657 4167 767858494 767857984 0.000000e+00 856.0
15 TraesCS7A01G369600 chr6A 96.477 511 18 0 3657 4167 385604107 385603597 0.000000e+00 845.0
16 TraesCS7A01G369600 chr6A 95.695 511 22 0 3657 4167 132441236 132440726 0.000000e+00 822.0
17 TraesCS7A01G369600 chr6A 95.703 512 21 1 3656 4167 598769495 598770005 0.000000e+00 822.0
18 TraesCS7A01G369600 chrUn 86.061 660 81 7 286 937 92407412 92406756 0.000000e+00 699.0
19 TraesCS7A01G369600 chrUn 85.954 655 85 4 287 937 223001724 223002375 0.000000e+00 693.0
20 TraesCS7A01G369600 chrUn 85.888 659 83 6 286 937 380756158 380756813 0.000000e+00 693.0
21 TraesCS7A01G369600 chr3D 85.736 659 89 3 275 929 340702207 340702864 0.000000e+00 691.0
22 TraesCS7A01G369600 chr3D 85.802 655 85 4 287 937 29493377 29494027 0.000000e+00 688.0
23 TraesCS7A01G369600 chr3D 85.802 655 85 4 287 937 29528306 29528956 0.000000e+00 688.0
24 TraesCS7A01G369600 chr3D 85.649 655 86 4 287 937 29565246 29565896 0.000000e+00 682.0
25 TraesCS7A01G369600 chr4D 84.595 370 41 9 2764 3132 456086997 456087351 1.840000e-93 353.0
26 TraesCS7A01G369600 chr5D 75.212 589 130 14 2577 3158 305731755 305732334 8.880000e-67 265.0
27 TraesCS7A01G369600 chr5B 75.000 588 130 13 2577 3158 350413314 350413890 5.350000e-64 255.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G369600 chr7A 543064176 543068342 4166 True 7696.00 7696 100.0000 1 4167 1 chr7A.!!$R1 4166
1 TraesCS7A01G369600 chr7A 576299651 576300161 510 False 833.00 833 96.0860 3657 4167 1 chr7A.!!$F1 510
2 TraesCS7A01G369600 chr7A 680725985 680726495 510 False 828.00 828 95.8980 3656 4167 1 chr7A.!!$F2 511
3 TraesCS7A01G369600 chr7D 457184091 457186921 2830 False 1751.55 3430 92.2685 192 3398 2 chr7D.!!$F2 3206
4 TraesCS7A01G369600 chr7D 201193899 201196745 2846 True 1657.50 3240 93.6950 186 3442 2 chr7D.!!$R1 3256
5 TraesCS7A01G369600 chr7D 91748422 91749068 646 False 747.00 747 87.6340 291 937 1 chr7D.!!$F1 646
6 TraesCS7A01G369600 chr7B 479491509 479494004 2495 False 1710.85 3343 94.2260 187 3442 2 chr7B.!!$F1 3255
7 TraesCS7A01G369600 chr3A 196853022 196853532 510 True 861.00 861 97.0650 3657 4167 1 chr3A.!!$R1 510
8 TraesCS7A01G369600 chr3A 734399817 734400327 510 True 856.00 856 96.8690 3657 4167 1 chr3A.!!$R3 510
9 TraesCS7A01G369600 chr3A 584027973 584028642 669 True 723.00 723 86.2690 274 937 1 chr3A.!!$R2 663
10 TraesCS7A01G369600 chr2A 617787097 617787607 510 True 861.00 861 97.0650 3657 4167 1 chr2A.!!$R1 510
11 TraesCS7A01G369600 chr2A 767857984 767858494 510 True 856.00 856 96.8690 3657 4167 1 chr2A.!!$R2 510
12 TraesCS7A01G369600 chr6A 385603597 385604107 510 True 845.00 845 96.4770 3657 4167 1 chr6A.!!$R2 510
13 TraesCS7A01G369600 chr6A 132440726 132441236 510 True 822.00 822 95.6950 3657 4167 1 chr6A.!!$R1 510
14 TraesCS7A01G369600 chr6A 598769495 598770005 510 False 822.00 822 95.7030 3656 4167 1 chr6A.!!$F1 511
15 TraesCS7A01G369600 chrUn 92406756 92407412 656 True 699.00 699 86.0610 286 937 1 chrUn.!!$R1 651
16 TraesCS7A01G369600 chrUn 223001724 223002375 651 False 693.00 693 85.9540 287 937 1 chrUn.!!$F1 650
17 TraesCS7A01G369600 chrUn 380756158 380756813 655 False 693.00 693 85.8880 286 937 1 chrUn.!!$F2 651
18 TraesCS7A01G369600 chr3D 340702207 340702864 657 False 691.00 691 85.7360 275 929 1 chr3D.!!$F4 654
19 TraesCS7A01G369600 chr3D 29493377 29494027 650 False 688.00 688 85.8020 287 937 1 chr3D.!!$F1 650
20 TraesCS7A01G369600 chr3D 29528306 29528956 650 False 688.00 688 85.8020 287 937 1 chr3D.!!$F2 650
21 TraesCS7A01G369600 chr3D 29565246 29565896 650 False 682.00 682 85.6490 287 937 1 chr3D.!!$F3 650
22 TraesCS7A01G369600 chr5D 305731755 305732334 579 False 265.00 265 75.2120 2577 3158 1 chr5D.!!$F1 581
23 TraesCS7A01G369600 chr5B 350413314 350413890 576 False 255.00 255 75.0000 2577 3158 1 chr5B.!!$F1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.037046 AAACCCTAAACGGTCGCGAT 60.037 50.0 14.06 0.00 33.98 4.58 F
181 182 0.039035 TGGGCCTTATCACGCCTTTT 59.961 50.0 4.53 0.00 45.01 2.27 F
1065 1084 0.108520 GTGATCCGGCCGACTTAACA 60.109 55.0 30.73 14.47 0.00 2.41 F
2066 2691 0.460284 AGCCTCTGCGGAATTACGTG 60.460 55.0 12.53 5.43 44.33 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 2253 0.037605 GTCACTCCTTACCCACACCG 60.038 60.0 0.00 0.00 0.00 4.94 R
1752 2374 0.303493 AAACGCATGCGCCTATTACG 59.697 50.0 38.15 10.95 44.19 3.18 R
2795 3440 0.609957 TCCAAGCTGAACAGGCCATG 60.610 55.0 5.01 2.64 0.00 3.66 R
3805 4461 0.757561 CCAACCGGGACCAAAAGGTT 60.758 55.0 6.32 6.98 46.76 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.935955 CGCGTGGGTGTCTTGTTC 59.064 61.111 0.00 0.00 0.00 3.18
18 19 2.935955 GCGTGGGTGTCTTGTTCG 59.064 61.111 0.00 0.00 0.00 3.95
19 20 1.885850 GCGTGGGTGTCTTGTTCGT 60.886 57.895 0.00 0.00 0.00 3.85
20 21 1.433837 GCGTGGGTGTCTTGTTCGTT 61.434 55.000 0.00 0.00 0.00 3.85
21 22 0.580104 CGTGGGTGTCTTGTTCGTTC 59.420 55.000 0.00 0.00 0.00 3.95
22 23 1.658994 GTGGGTGTCTTGTTCGTTCA 58.341 50.000 0.00 0.00 0.00 3.18
23 24 2.218603 GTGGGTGTCTTGTTCGTTCAT 58.781 47.619 0.00 0.00 0.00 2.57
24 25 2.223377 GTGGGTGTCTTGTTCGTTCATC 59.777 50.000 0.00 0.00 0.00 2.92
25 26 2.104111 TGGGTGTCTTGTTCGTTCATCT 59.896 45.455 0.00 0.00 0.00 2.90
26 27 2.737252 GGGTGTCTTGTTCGTTCATCTC 59.263 50.000 0.00 0.00 0.00 2.75
27 28 2.408704 GGTGTCTTGTTCGTTCATCTCG 59.591 50.000 0.00 0.00 0.00 4.04
28 29 2.058798 TGTCTTGTTCGTTCATCTCGC 58.941 47.619 0.00 0.00 0.00 5.03
29 30 2.288213 TGTCTTGTTCGTTCATCTCGCT 60.288 45.455 0.00 0.00 0.00 4.93
30 31 2.342948 GTCTTGTTCGTTCATCTCGCTC 59.657 50.000 0.00 0.00 0.00 5.03
31 32 1.318785 CTTGTTCGTTCATCTCGCTCG 59.681 52.381 0.00 0.00 0.00 5.03
32 33 1.071019 TGTTCGTTCATCTCGCTCGC 61.071 55.000 0.00 0.00 0.00 5.03
33 34 1.516386 TTCGTTCATCTCGCTCGCC 60.516 57.895 0.00 0.00 0.00 5.54
34 35 1.934220 TTCGTTCATCTCGCTCGCCT 61.934 55.000 0.00 0.00 0.00 5.52
35 36 1.093496 TCGTTCATCTCGCTCGCCTA 61.093 55.000 0.00 0.00 0.00 3.93
36 37 0.248498 CGTTCATCTCGCTCGCCTAA 60.248 55.000 0.00 0.00 0.00 2.69
37 38 1.600663 CGTTCATCTCGCTCGCCTAAT 60.601 52.381 0.00 0.00 0.00 1.73
38 39 2.055100 GTTCATCTCGCTCGCCTAATC 58.945 52.381 0.00 0.00 0.00 1.75
39 40 1.610363 TCATCTCGCTCGCCTAATCT 58.390 50.000 0.00 0.00 0.00 2.40
40 41 1.537638 TCATCTCGCTCGCCTAATCTC 59.462 52.381 0.00 0.00 0.00 2.75
41 42 1.268079 CATCTCGCTCGCCTAATCTCA 59.732 52.381 0.00 0.00 0.00 3.27
42 43 1.389555 TCTCGCTCGCCTAATCTCAA 58.610 50.000 0.00 0.00 0.00 3.02
43 44 1.957177 TCTCGCTCGCCTAATCTCAAT 59.043 47.619 0.00 0.00 0.00 2.57
44 45 2.030717 TCTCGCTCGCCTAATCTCAATC 60.031 50.000 0.00 0.00 0.00 2.67
45 46 1.000163 TCGCTCGCCTAATCTCAATCC 60.000 52.381 0.00 0.00 0.00 3.01
46 47 1.802069 GCTCGCCTAATCTCAATCCC 58.198 55.000 0.00 0.00 0.00 3.85
47 48 1.346068 GCTCGCCTAATCTCAATCCCT 59.654 52.381 0.00 0.00 0.00 4.20
48 49 2.563179 GCTCGCCTAATCTCAATCCCTA 59.437 50.000 0.00 0.00 0.00 3.53
49 50 3.367910 GCTCGCCTAATCTCAATCCCTAG 60.368 52.174 0.00 0.00 0.00 3.02
50 51 2.563179 TCGCCTAATCTCAATCCCTAGC 59.437 50.000 0.00 0.00 0.00 3.42
51 52 2.564947 CGCCTAATCTCAATCCCTAGCT 59.435 50.000 0.00 0.00 0.00 3.32
52 53 3.616076 CGCCTAATCTCAATCCCTAGCTG 60.616 52.174 0.00 0.00 0.00 4.24
53 54 3.867984 GCCTAATCTCAATCCCTAGCTGC 60.868 52.174 0.00 0.00 0.00 5.25
54 55 2.947127 AATCTCAATCCCTAGCTGCC 57.053 50.000 0.00 0.00 0.00 4.85
55 56 1.063183 ATCTCAATCCCTAGCTGCCC 58.937 55.000 0.00 0.00 0.00 5.36
56 57 1.056700 TCTCAATCCCTAGCTGCCCC 61.057 60.000 0.00 0.00 0.00 5.80
57 58 2.061790 CTCAATCCCTAGCTGCCCCC 62.062 65.000 0.00 0.00 0.00 5.40
58 59 3.171388 AATCCCTAGCTGCCCCCG 61.171 66.667 0.00 0.00 0.00 5.73
59 60 3.714078 AATCCCTAGCTGCCCCCGA 62.714 63.158 0.00 0.00 0.00 5.14
63 64 3.854669 CTAGCTGCCCCCGACCAG 61.855 72.222 0.00 0.00 0.00 4.00
64 65 4.392166 TAGCTGCCCCCGACCAGA 62.392 66.667 0.00 0.00 0.00 3.86
65 66 3.916438 TAGCTGCCCCCGACCAGAA 62.916 63.158 0.00 0.00 0.00 3.02
67 68 4.760047 CTGCCCCCGACCAGAACG 62.760 72.222 0.00 0.00 0.00 3.95
72 73 4.351938 CCCGACCAGAACGCACGA 62.352 66.667 0.00 0.00 0.00 4.35
73 74 2.126071 CCGACCAGAACGCACGAT 60.126 61.111 0.00 0.00 0.00 3.73
74 75 2.158959 CCGACCAGAACGCACGATC 61.159 63.158 0.00 0.00 0.00 3.69
75 76 2.497092 CGACCAGAACGCACGATCG 61.497 63.158 14.88 14.88 0.00 3.69
76 77 2.789203 GACCAGAACGCACGATCGC 61.789 63.158 16.60 0.00 0.00 4.58
77 78 2.507102 CCAGAACGCACGATCGCT 60.507 61.111 16.60 0.00 0.00 4.93
78 79 2.508891 CCAGAACGCACGATCGCTC 61.509 63.158 16.60 6.06 0.00 5.03
79 80 2.202623 AGAACGCACGATCGCTCC 60.203 61.111 16.60 2.42 0.00 4.70
80 81 3.255379 GAACGCACGATCGCTCCC 61.255 66.667 16.60 0.00 0.00 4.30
101 102 2.349755 GCCTGCACCGAAACCCTA 59.650 61.111 0.00 0.00 0.00 3.53
102 103 1.302993 GCCTGCACCGAAACCCTAA 60.303 57.895 0.00 0.00 0.00 2.69
103 104 0.891904 GCCTGCACCGAAACCCTAAA 60.892 55.000 0.00 0.00 0.00 1.85
104 105 0.879090 CCTGCACCGAAACCCTAAAC 59.121 55.000 0.00 0.00 0.00 2.01
105 106 0.515564 CTGCACCGAAACCCTAAACG 59.484 55.000 0.00 0.00 0.00 3.60
109 110 2.448477 CCGAAACCCTAAACGGTCG 58.552 57.895 0.00 0.00 40.42 4.79
110 111 1.629345 CCGAAACCCTAAACGGTCGC 61.629 60.000 0.00 0.00 40.42 5.19
111 112 1.783434 GAAACCCTAAACGGTCGCG 59.217 57.895 0.00 0.00 33.98 5.87
112 113 0.667184 GAAACCCTAAACGGTCGCGA 60.667 55.000 3.71 3.71 33.98 5.87
113 114 0.037046 AAACCCTAAACGGTCGCGAT 60.037 50.000 14.06 0.00 33.98 4.58
114 115 0.738412 AACCCTAAACGGTCGCGATG 60.738 55.000 14.06 11.28 33.98 3.84
115 116 1.153706 CCCTAAACGGTCGCGATGT 60.154 57.895 14.06 12.04 0.00 3.06
116 117 0.738412 CCCTAAACGGTCGCGATGTT 60.738 55.000 14.06 17.78 0.00 2.71
117 118 1.469595 CCCTAAACGGTCGCGATGTTA 60.470 52.381 23.97 14.03 0.00 2.41
118 119 1.585214 CCTAAACGGTCGCGATGTTAC 59.415 52.381 23.97 8.08 0.00 2.50
119 120 1.585214 CTAAACGGTCGCGATGTTACC 59.415 52.381 23.97 15.32 0.00 2.85
120 121 1.015607 AAACGGTCGCGATGTTACCC 61.016 55.000 23.97 14.16 0.00 3.69
121 122 1.880819 AACGGTCGCGATGTTACCCT 61.881 55.000 22.89 4.11 0.00 4.34
122 123 1.031571 ACGGTCGCGATGTTACCCTA 61.032 55.000 14.06 0.00 0.00 3.53
123 124 0.593263 CGGTCGCGATGTTACCCTAC 60.593 60.000 14.06 0.00 0.00 3.18
124 125 0.457035 GGTCGCGATGTTACCCTACA 59.543 55.000 14.06 0.00 0.00 2.74
125 126 1.068127 GGTCGCGATGTTACCCTACAT 59.932 52.381 14.06 0.00 41.30 2.29
126 127 2.482490 GGTCGCGATGTTACCCTACATT 60.482 50.000 14.06 0.00 38.80 2.71
127 128 2.538449 GTCGCGATGTTACCCTACATTG 59.462 50.000 14.06 0.00 41.10 2.82
128 129 1.864711 CGCGATGTTACCCTACATTGG 59.135 52.381 0.00 0.00 39.37 3.16
129 130 2.740580 CGCGATGTTACCCTACATTGGT 60.741 50.000 0.00 0.00 39.37 3.67
130 131 2.612212 GCGATGTTACCCTACATTGGTG 59.388 50.000 0.00 0.00 39.37 4.17
131 132 3.680475 GCGATGTTACCCTACATTGGTGA 60.680 47.826 0.00 0.00 39.37 4.02
132 133 3.869246 CGATGTTACCCTACATTGGTGAC 59.131 47.826 0.00 0.00 41.42 3.67
133 134 3.322211 TGTTACCCTACATTGGTGACG 57.678 47.619 0.00 0.00 43.33 4.35
134 135 2.027929 TGTTACCCTACATTGGTGACGG 60.028 50.000 0.00 0.00 43.33 4.79
135 136 0.538118 TACCCTACATTGGTGACGGC 59.462 55.000 0.00 0.00 36.57 5.68
136 137 1.198759 ACCCTACATTGGTGACGGCT 61.199 55.000 0.00 0.00 33.94 5.52
137 138 0.462047 CCCTACATTGGTGACGGCTC 60.462 60.000 0.00 0.00 0.00 4.70
138 139 0.462047 CCTACATTGGTGACGGCTCC 60.462 60.000 1.26 1.26 0.00 4.70
139 140 0.537188 CTACATTGGTGACGGCTCCT 59.463 55.000 11.34 0.00 0.00 3.69
140 141 0.249120 TACATTGGTGACGGCTCCTG 59.751 55.000 11.34 3.92 0.00 3.86
141 142 1.003355 CATTGGTGACGGCTCCTGT 60.003 57.895 11.34 0.00 0.00 4.00
142 143 0.606401 CATTGGTGACGGCTCCTGTT 60.606 55.000 11.34 0.00 0.00 3.16
143 144 0.321653 ATTGGTGACGGCTCCTGTTC 60.322 55.000 11.34 0.00 0.00 3.18
144 145 1.407656 TTGGTGACGGCTCCTGTTCT 61.408 55.000 11.34 0.00 0.00 3.01
145 146 1.374758 GGTGACGGCTCCTGTTCTG 60.375 63.158 0.95 0.00 0.00 3.02
146 147 1.666011 GTGACGGCTCCTGTTCTGA 59.334 57.895 0.00 0.00 0.00 3.27
147 148 0.247736 GTGACGGCTCCTGTTCTGAT 59.752 55.000 0.00 0.00 0.00 2.90
148 149 0.247460 TGACGGCTCCTGTTCTGATG 59.753 55.000 0.00 0.00 0.00 3.07
149 150 1.078848 ACGGCTCCTGTTCTGATGC 60.079 57.895 0.00 0.00 0.00 3.91
150 151 2.169789 CGGCTCCTGTTCTGATGCG 61.170 63.158 0.00 0.00 0.00 4.73
151 152 2.467826 GGCTCCTGTTCTGATGCGC 61.468 63.158 0.00 0.00 0.00 6.09
152 153 1.449246 GCTCCTGTTCTGATGCGCT 60.449 57.895 9.73 0.00 0.00 5.92
153 154 1.427592 GCTCCTGTTCTGATGCGCTC 61.428 60.000 9.73 4.27 0.00 5.03
154 155 0.175302 CTCCTGTTCTGATGCGCTCT 59.825 55.000 9.73 0.00 0.00 4.09
155 156 0.108472 TCCTGTTCTGATGCGCTCTG 60.108 55.000 9.73 8.10 0.00 3.35
156 157 0.108472 CCTGTTCTGATGCGCTCTGA 60.108 55.000 9.73 10.36 0.00 3.27
157 158 1.472904 CCTGTTCTGATGCGCTCTGAT 60.473 52.381 9.73 0.00 32.55 2.90
158 159 1.859703 CTGTTCTGATGCGCTCTGATC 59.140 52.381 9.73 12.05 32.55 2.92
159 160 1.216122 GTTCTGATGCGCTCTGATCC 58.784 55.000 9.73 4.11 32.55 3.36
160 161 1.117994 TTCTGATGCGCTCTGATCCT 58.882 50.000 9.73 0.00 32.55 3.24
161 162 1.986882 TCTGATGCGCTCTGATCCTA 58.013 50.000 9.73 0.00 0.00 2.94
162 163 2.523245 TCTGATGCGCTCTGATCCTAT 58.477 47.619 9.73 0.00 0.00 2.57
163 164 2.230750 TCTGATGCGCTCTGATCCTATG 59.769 50.000 9.73 0.00 0.00 2.23
164 165 1.274447 TGATGCGCTCTGATCCTATGG 59.726 52.381 9.73 0.00 0.00 2.74
165 166 0.612229 ATGCGCTCTGATCCTATGGG 59.388 55.000 9.73 0.00 0.00 4.00
166 167 1.375268 GCGCTCTGATCCTATGGGC 60.375 63.158 0.00 0.00 0.00 5.36
167 168 1.294780 CGCTCTGATCCTATGGGCC 59.705 63.158 0.00 0.00 0.00 5.80
168 169 1.190833 CGCTCTGATCCTATGGGCCT 61.191 60.000 4.53 0.00 0.00 5.19
169 170 1.063183 GCTCTGATCCTATGGGCCTT 58.937 55.000 4.53 0.00 0.00 4.35
170 171 2.260822 GCTCTGATCCTATGGGCCTTA 58.739 52.381 4.53 1.19 0.00 2.69
171 172 2.843113 GCTCTGATCCTATGGGCCTTAT 59.157 50.000 4.53 0.00 0.00 1.73
172 173 3.118445 GCTCTGATCCTATGGGCCTTATC 60.118 52.174 4.53 0.00 0.00 1.75
173 174 4.099633 CTCTGATCCTATGGGCCTTATCA 58.900 47.826 4.53 4.19 0.00 2.15
174 175 3.840666 TCTGATCCTATGGGCCTTATCAC 59.159 47.826 4.53 0.00 0.00 3.06
175 176 2.567169 TGATCCTATGGGCCTTATCACG 59.433 50.000 4.53 0.00 0.00 4.35
176 177 0.685097 TCCTATGGGCCTTATCACGC 59.315 55.000 4.53 0.00 0.00 5.34
177 178 0.321653 CCTATGGGCCTTATCACGCC 60.322 60.000 4.53 0.00 44.92 5.68
178 179 0.687354 CTATGGGCCTTATCACGCCT 59.313 55.000 4.53 0.00 45.01 5.52
179 180 1.072331 CTATGGGCCTTATCACGCCTT 59.928 52.381 4.53 0.00 45.01 4.35
180 181 0.258774 ATGGGCCTTATCACGCCTTT 59.741 50.000 4.53 0.00 45.01 3.11
181 182 0.039035 TGGGCCTTATCACGCCTTTT 59.961 50.000 4.53 0.00 45.01 2.27
182 183 1.182667 GGGCCTTATCACGCCTTTTT 58.817 50.000 0.84 0.00 45.01 1.94
183 184 1.135112 GGGCCTTATCACGCCTTTTTG 60.135 52.381 0.84 0.00 45.01 2.44
184 185 1.544246 GGCCTTATCACGCCTTTTTGT 59.456 47.619 0.00 0.00 42.21 2.83
185 186 2.029380 GGCCTTATCACGCCTTTTTGTT 60.029 45.455 0.00 0.00 42.21 2.83
186 187 3.242518 GCCTTATCACGCCTTTTTGTTC 58.757 45.455 0.00 0.00 0.00 3.18
187 188 3.488489 CCTTATCACGCCTTTTTGTTCG 58.512 45.455 0.00 0.00 0.00 3.95
188 189 2.604969 TATCACGCCTTTTTGTTCGC 57.395 45.000 0.00 0.00 0.00 4.70
189 190 0.665835 ATCACGCCTTTTTGTTCGCA 59.334 45.000 0.00 0.00 0.00 5.10
197 198 3.300009 CCTTTTTGTTCGCATGTGTCTC 58.700 45.455 6.09 0.00 0.00 3.36
234 235 0.831307 GCCCGTTCTCAATCCCTAGT 59.169 55.000 0.00 0.00 0.00 2.57
235 236 1.202545 GCCCGTTCTCAATCCCTAGTC 60.203 57.143 0.00 0.00 0.00 2.59
236 237 1.067212 CCCGTTCTCAATCCCTAGTCG 59.933 57.143 0.00 0.00 0.00 4.18
237 238 1.749634 CCGTTCTCAATCCCTAGTCGT 59.250 52.381 0.00 0.00 0.00 4.34
238 239 2.223525 CCGTTCTCAATCCCTAGTCGTC 60.224 54.545 0.00 0.00 0.00 4.20
239 240 2.223525 CGTTCTCAATCCCTAGTCGTCC 60.224 54.545 0.00 0.00 0.00 4.79
240 241 2.068834 TCTCAATCCCTAGTCGTCCC 57.931 55.000 0.00 0.00 0.00 4.46
241 242 1.041437 CTCAATCCCTAGTCGTCCCC 58.959 60.000 0.00 0.00 0.00 4.81
242 243 0.754217 TCAATCCCTAGTCGTCCCCG 60.754 60.000 0.00 0.00 0.00 5.73
243 244 0.754217 CAATCCCTAGTCGTCCCCGA 60.754 60.000 0.00 0.00 41.73 5.14
251 252 4.762825 TCGTCCCCGACTTGTTTG 57.237 55.556 0.00 0.00 38.40 2.93
252 253 1.595929 TCGTCCCCGACTTGTTTGC 60.596 57.895 0.00 0.00 38.40 3.68
253 254 2.613506 CGTCCCCGACTTGTTTGCC 61.614 63.158 0.00 0.00 35.63 4.52
254 255 1.527380 GTCCCCGACTTGTTTGCCA 60.527 57.895 0.00 0.00 0.00 4.92
255 256 1.228124 TCCCCGACTTGTTTGCCAG 60.228 57.895 0.00 0.00 0.00 4.85
256 257 2.268076 CCCCGACTTGTTTGCCAGG 61.268 63.158 0.00 0.00 0.00 4.45
257 258 2.268076 CCCGACTTGTTTGCCAGGG 61.268 63.158 0.00 0.00 0.00 4.45
258 259 1.528309 CCGACTTGTTTGCCAGGGT 60.528 57.895 0.00 0.00 0.00 4.34
259 260 1.106944 CCGACTTGTTTGCCAGGGTT 61.107 55.000 0.00 0.00 0.00 4.11
260 261 0.310854 CGACTTGTTTGCCAGGGTTC 59.689 55.000 0.00 0.00 0.00 3.62
261 262 1.692411 GACTTGTTTGCCAGGGTTCT 58.308 50.000 0.00 0.00 0.00 3.01
262 263 2.031870 GACTTGTTTGCCAGGGTTCTT 58.968 47.619 0.00 0.00 0.00 2.52
263 264 1.756538 ACTTGTTTGCCAGGGTTCTTG 59.243 47.619 0.00 0.00 0.00 3.02
264 265 1.756538 CTTGTTTGCCAGGGTTCTTGT 59.243 47.619 0.00 0.00 0.00 3.16
265 266 1.110442 TGTTTGCCAGGGTTCTTGTG 58.890 50.000 0.00 0.00 0.00 3.33
266 267 1.111277 GTTTGCCAGGGTTCTTGTGT 58.889 50.000 0.00 0.00 0.00 3.72
267 268 1.480545 GTTTGCCAGGGTTCTTGTGTT 59.519 47.619 0.00 0.00 0.00 3.32
268 269 1.110442 TTGCCAGGGTTCTTGTGTTG 58.890 50.000 0.00 0.00 0.00 3.33
269 270 1.363807 GCCAGGGTTCTTGTGTTGC 59.636 57.895 0.00 0.00 0.00 4.17
270 271 2.041153 CCAGGGTTCTTGTGTTGCC 58.959 57.895 0.00 0.00 0.00 4.52
271 272 1.654220 CAGGGTTCTTGTGTTGCCG 59.346 57.895 0.00 0.00 0.00 5.69
272 273 2.193536 AGGGTTCTTGTGTTGCCGC 61.194 57.895 0.00 0.00 0.00 6.53
341 342 2.496341 CATCTTGGCGCCGAGAGA 59.504 61.111 41.24 32.35 39.56 3.10
348 350 3.849951 GCGCCGAGAGATGGGGAA 61.850 66.667 0.00 0.00 41.69 3.97
365 367 2.633488 GGAAACCTCGGATCTTCAAGG 58.367 52.381 0.00 0.00 34.94 3.61
386 388 3.282021 GCCTCTATGTTCTTTGCCATCA 58.718 45.455 0.00 0.00 0.00 3.07
427 429 8.697507 AGTTTTGTGAGAATAAACTTCCTCAT 57.302 30.769 0.00 0.00 37.88 2.90
438 440 3.515602 ACTTCCTCATGCTCTTTTGGT 57.484 42.857 0.00 0.00 0.00 3.67
519 533 6.781138 TGAGTTTATGTTGTTGTGTCAAGTC 58.219 36.000 0.00 0.00 0.00 3.01
525 540 4.233789 TGTTGTTGTGTCAAGTCTTTTGC 58.766 39.130 0.00 0.00 0.00 3.68
546 561 3.557898 GCTGGTCTGATTCTTTGTGGAGA 60.558 47.826 0.00 0.00 0.00 3.71
553 568 7.094032 GGTCTGATTCTTTGTGGAGATGAAATT 60.094 37.037 0.00 0.00 0.00 1.82
557 572 9.263538 TGATTCTTTGTGGAGATGAAATTTTTG 57.736 29.630 0.00 0.00 0.00 2.44
558 573 8.611654 ATTCTTTGTGGAGATGAAATTTTTGG 57.388 30.769 0.00 0.00 0.00 3.28
568 583 2.287308 TGAAATTTTTGGTCGACGCCAG 60.287 45.455 9.92 0.00 40.01 4.85
588 603 5.221722 GCCAGGGTGAAGATATAGTGATTCA 60.222 44.000 0.00 0.00 0.00 2.57
645 660 1.859080 GTACGTTCATCGATCAAGGCC 59.141 52.381 1.38 0.00 42.86 5.19
676 691 0.616395 TGGATGGGCGACTCAAGGTA 60.616 55.000 0.00 0.00 0.00 3.08
730 745 4.453478 GCAGATGAAAGAGTGACAACATCA 59.547 41.667 0.00 0.00 37.27 3.07
766 781 1.071699 TGCAGCCTCTTTACCGAAGTT 59.928 47.619 0.00 0.00 36.70 2.66
781 796 6.555812 ACCGAAGTTTTTGGAGTATTTCTC 57.444 37.500 2.13 0.00 42.07 2.87
889 907 8.106462 TGGATCTTAAGTCCAAATCAATGTACA 58.894 33.333 18.66 0.00 42.56 2.90
955 973 6.987403 AAAAAGTTATCCCTGGCTAAAACA 57.013 33.333 0.00 0.00 0.00 2.83
965 983 1.076332 GGCTAAAACACACGATCGCT 58.924 50.000 16.60 0.00 0.00 4.93
966 985 2.264813 GGCTAAAACACACGATCGCTA 58.735 47.619 16.60 0.00 0.00 4.26
993 1012 3.759550 GGCAACGAAACCCTAAACG 57.240 52.632 0.00 0.00 0.00 3.60
996 1015 0.239082 CAACGAAACCCTAAACGGCC 59.761 55.000 0.00 0.00 0.00 6.13
1006 1025 0.299597 CTAAACGGCCGCGATGTTAC 59.700 55.000 28.58 0.00 0.00 2.50
1016 1035 1.883084 CGATGTTACCAGCCGAGGC 60.883 63.158 5.89 5.89 42.33 4.70
1029 1048 2.797278 CGAGGCGCCATACCTTCCT 61.797 63.158 31.54 3.33 37.77 3.36
1030 1049 1.227674 GAGGCGCCATACCTTCCTG 60.228 63.158 31.54 0.00 37.77 3.86
1031 1050 2.902343 GGCGCCATACCTTCCTGC 60.902 66.667 24.80 0.00 0.00 4.85
1035 1054 1.152881 GCCATACCTTCCTGCAGGG 60.153 63.158 32.23 18.81 38.42 4.45
1062 1081 2.802792 CGTGATCCGGCCGACTTA 59.197 61.111 30.73 9.55 0.00 2.24
1063 1082 1.140161 CGTGATCCGGCCGACTTAA 59.860 57.895 30.73 6.66 0.00 1.85
1064 1083 1.143969 CGTGATCCGGCCGACTTAAC 61.144 60.000 30.73 16.61 0.00 2.01
1065 1084 0.108520 GTGATCCGGCCGACTTAACA 60.109 55.000 30.73 14.47 0.00 2.41
1066 1085 0.828022 TGATCCGGCCGACTTAACAT 59.172 50.000 30.73 6.13 0.00 2.71
1067 1086 2.033372 TGATCCGGCCGACTTAACATA 58.967 47.619 30.73 0.00 0.00 2.29
1068 1087 2.223876 TGATCCGGCCGACTTAACATAC 60.224 50.000 30.73 6.09 0.00 2.39
1069 1088 0.461135 TCCGGCCGACTTAACATACC 59.539 55.000 30.73 0.00 0.00 2.73
1070 1089 0.531311 CCGGCCGACTTAACATACCC 60.531 60.000 30.73 0.00 0.00 3.69
1071 1090 0.531311 CGGCCGACTTAACATACCCC 60.531 60.000 24.07 0.00 0.00 4.95
1072 1091 0.835276 GGCCGACTTAACATACCCCT 59.165 55.000 0.00 0.00 0.00 4.79
1073 1092 1.202615 GGCCGACTTAACATACCCCTC 60.203 57.143 0.00 0.00 0.00 4.30
1074 1093 1.202615 GCCGACTTAACATACCCCTCC 60.203 57.143 0.00 0.00 0.00 4.30
1075 1094 1.068127 CCGACTTAACATACCCCTCCG 59.932 57.143 0.00 0.00 0.00 4.63
1076 1095 2.026641 CGACTTAACATACCCCTCCGA 58.973 52.381 0.00 0.00 0.00 4.55
1077 1096 2.223665 CGACTTAACATACCCCTCCGAC 60.224 54.545 0.00 0.00 0.00 4.79
1078 1097 2.102084 GACTTAACATACCCCTCCGACC 59.898 54.545 0.00 0.00 0.00 4.79
1079 1098 2.292719 ACTTAACATACCCCTCCGACCT 60.293 50.000 0.00 0.00 0.00 3.85
1080 1099 3.052642 ACTTAACATACCCCTCCGACCTA 60.053 47.826 0.00 0.00 0.00 3.08
1081 1100 2.789323 AACATACCCCTCCGACCTAT 57.211 50.000 0.00 0.00 0.00 2.57
1082 1101 2.789323 ACATACCCCTCCGACCTATT 57.211 50.000 0.00 0.00 0.00 1.73
1083 1102 3.056201 ACATACCCCTCCGACCTATTT 57.944 47.619 0.00 0.00 0.00 1.40
1084 1103 2.704065 ACATACCCCTCCGACCTATTTG 59.296 50.000 0.00 0.00 0.00 2.32
1085 1104 1.797320 TACCCCTCCGACCTATTTGG 58.203 55.000 0.00 0.00 42.93 3.28
1094 1113 2.900337 CCTATTTGGTCCCGCGCC 60.900 66.667 0.00 0.00 0.00 6.53
1095 1114 2.900337 CTATTTGGTCCCGCGCCC 60.900 66.667 0.00 0.00 0.00 6.13
1096 1115 4.493049 TATTTGGTCCCGCGCCCC 62.493 66.667 0.00 0.00 0.00 5.80
1199 1525 2.488952 GATCGGCTCCATCTTTTCCTC 58.511 52.381 0.00 0.00 0.00 3.71
1214 1540 6.697395 TCTTTTCCTCTATCGACAAACATGA 58.303 36.000 0.00 0.00 0.00 3.07
1240 1566 3.458163 CGCTCAAGGCCGAGGGTA 61.458 66.667 14.25 0.00 40.20 3.69
1253 1580 3.584947 AGGGTACGTACACTCCTCC 57.415 57.895 24.74 15.48 34.05 4.30
1456 2073 2.202492 GCGCACTCTGACGACGAT 60.202 61.111 0.30 0.00 0.00 3.73
1457 2074 2.500442 GCGCACTCTGACGACGATG 61.500 63.158 0.30 0.00 0.00 3.84
1458 2075 1.134694 CGCACTCTGACGACGATGA 59.865 57.895 0.00 0.00 0.00 2.92
1518 2135 1.034292 GGCAGGCCATTCTCCAGAAC 61.034 60.000 5.01 0.00 36.80 3.01
1559 2181 2.990514 ACCAAAAACGATTAATTGCCGC 59.009 40.909 2.34 0.00 0.00 6.53
1631 2253 4.393371 GGAGAAAGCCAAACTGATACAGAC 59.607 45.833 5.76 0.00 35.18 3.51
1701 2323 5.738495 GCTGTGCAAGATGCTTCTAGATCTA 60.738 44.000 2.02 1.69 45.31 1.98
1752 2374 7.283354 CCTTTTCCTATGAAAGTATTCCCTCAC 59.717 40.741 0.00 0.00 41.31 3.51
1754 2376 4.960469 TCCTATGAAAGTATTCCCTCACGT 59.040 41.667 0.00 0.00 34.49 4.49
1802 2424 4.913335 ACTGTCACCACCGTATATACAG 57.087 45.455 13.22 4.15 38.97 2.74
1810 2432 4.282703 ACCACCGTATATACAGAACCCATC 59.717 45.833 13.22 0.00 0.00 3.51
1892 2516 5.739752 TGTGCTATCTATGCATGTGTTTC 57.260 39.130 10.16 0.00 42.69 2.78
1925 2550 6.691754 TTATTTTCCTCGATATTTGCAGCA 57.308 33.333 0.00 0.00 0.00 4.41
2066 2691 0.460284 AGCCTCTGCGGAATTACGTG 60.460 55.000 12.53 5.43 44.33 4.49
2131 2756 7.827236 CCAGGTAATCAAGTTAGACATGGTTTA 59.173 37.037 0.00 0.00 0.00 2.01
2176 2801 6.983984 TGCTCAAGAATGATTGATGTTCAAA 58.016 32.000 0.00 0.00 40.12 2.69
2177 2802 7.608153 TGCTCAAGAATGATTGATGTTCAAAT 58.392 30.769 0.00 0.00 40.12 2.32
2256 2881 6.000219 AGTTAGTCATGTGTGCTCAGATTTT 59.000 36.000 0.00 0.00 0.00 1.82
2270 2903 7.379797 GTGCTCAGATTTTTACCTCTGTTTTTC 59.620 37.037 0.00 0.00 39.87 2.29
2419 3058 7.260603 GGTTGGCAAGATATATAAATGATGGC 58.739 38.462 0.00 0.00 0.00 4.40
2434 3073 5.593679 ATGATGGCAGAAGAGAAAAATGG 57.406 39.130 0.00 0.00 0.00 3.16
2558 3200 3.696045 TGTTATATGTTGGCACAGGCTT 58.304 40.909 0.00 0.00 42.39 4.35
2561 3203 2.869101 TATGTTGGCACAGGCTTGTA 57.131 45.000 0.00 0.00 42.39 2.41
2563 3205 1.533625 TGTTGGCACAGGCTTGTATC 58.466 50.000 0.00 0.00 42.39 2.24
2565 3207 1.470098 GTTGGCACAGGCTTGTATCTG 59.530 52.381 0.00 0.00 42.39 2.90
2573 3218 5.297776 GCACAGGCTTGTATCTGAAATGTAT 59.702 40.000 0.00 0.00 35.25 2.29
2795 3440 6.646653 TGAAATGCTATATGGACAGATTCGTC 59.353 38.462 0.00 0.00 35.03 4.20
2796 3441 5.728637 ATGCTATATGGACAGATTCGTCA 57.271 39.130 9.66 0.00 37.66 4.35
3051 3696 2.622436 GGAATCACTCTTTCGGTGGAG 58.378 52.381 0.00 0.00 35.61 3.86
3159 3804 0.458025 CCTAAGAACTCGCGACCACC 60.458 60.000 3.71 0.00 0.00 4.61
3290 3943 5.622233 GCAAAAGTTTGAGGTCAGACTTGTT 60.622 40.000 14.69 9.48 46.44 2.83
3392 4047 6.239176 CCTTTAGTTTGGTTGCATCTTTGGTA 60.239 38.462 0.00 0.00 0.00 3.25
3399 4054 3.572255 GGTTGCATCTTTGGTAGTTTCCA 59.428 43.478 0.00 0.00 35.49 3.53
3406 4061 7.178274 TGCATCTTTGGTAGTTTCCATTGTAAT 59.822 33.333 0.00 0.00 37.33 1.89
3442 4098 6.708054 TGGCGTTTTTCATGGAAATTTGTATT 59.292 30.769 0.00 0.00 31.34 1.89
3443 4099 7.014702 GGCGTTTTTCATGGAAATTTGTATTG 58.985 34.615 0.00 0.00 31.34 1.90
3444 4100 6.519419 GCGTTTTTCATGGAAATTTGTATTGC 59.481 34.615 0.00 0.00 31.34 3.56
3445 4101 7.014702 CGTTTTTCATGGAAATTTGTATTGCC 58.985 34.615 0.00 0.00 39.63 4.52
3446 4102 6.718454 TTTTCATGGAAATTTGTATTGCCG 57.282 33.333 0.00 0.00 41.83 5.69
3447 4103 5.398603 TTCATGGAAATTTGTATTGCCGT 57.601 34.783 0.00 0.00 41.83 5.68
3450 4106 5.596836 ATGGAAATTTGTATTGCCGTGAT 57.403 34.783 0.00 0.00 41.83 3.06
3451 4107 5.398603 TGGAAATTTGTATTGCCGTGATT 57.601 34.783 0.00 0.00 41.83 2.57
3452 4108 5.167121 TGGAAATTTGTATTGCCGTGATTG 58.833 37.500 0.00 0.00 41.83 2.67
3453 4109 5.047731 TGGAAATTTGTATTGCCGTGATTGA 60.048 36.000 0.00 0.00 41.83 2.57
3454 4110 5.866633 GGAAATTTGTATTGCCGTGATTGAA 59.133 36.000 0.00 0.00 29.60 2.69
3455 4111 6.183360 GGAAATTTGTATTGCCGTGATTGAAC 60.183 38.462 0.00 0.00 29.60 3.18
3456 4112 4.837896 TTTGTATTGCCGTGATTGAACA 57.162 36.364 0.00 0.00 0.00 3.18
3457 4113 4.837896 TTGTATTGCCGTGATTGAACAA 57.162 36.364 0.00 0.00 0.00 2.83
3458 4114 4.837896 TGTATTGCCGTGATTGAACAAA 57.162 36.364 0.00 0.00 0.00 2.83
3459 4115 4.541779 TGTATTGCCGTGATTGAACAAAC 58.458 39.130 0.00 0.00 0.00 2.93
3460 4116 4.277174 TGTATTGCCGTGATTGAACAAACT 59.723 37.500 0.00 0.00 0.00 2.66
3461 4117 5.470437 TGTATTGCCGTGATTGAACAAACTA 59.530 36.000 0.00 0.00 0.00 2.24
3462 4118 5.643379 ATTGCCGTGATTGAACAAACTAT 57.357 34.783 0.00 0.00 0.00 2.12
3463 4119 5.446143 TTGCCGTGATTGAACAAACTATT 57.554 34.783 0.00 0.00 0.00 1.73
3464 4120 4.793071 TGCCGTGATTGAACAAACTATTG 58.207 39.130 0.00 0.00 42.46 1.90
3474 4130 1.540267 CAAACTATTGTTCCCCCGCA 58.460 50.000 0.00 0.00 34.96 5.69
3475 4131 2.099405 CAAACTATTGTTCCCCCGCAT 58.901 47.619 0.00 0.00 34.96 4.73
3476 4132 2.495669 CAAACTATTGTTCCCCCGCATT 59.504 45.455 0.00 0.00 34.96 3.56
3477 4133 3.655615 AACTATTGTTCCCCCGCATTA 57.344 42.857 0.00 0.00 0.00 1.90
3478 4134 3.876309 ACTATTGTTCCCCCGCATTAT 57.124 42.857 0.00 0.00 0.00 1.28
3479 4135 4.986054 ACTATTGTTCCCCCGCATTATA 57.014 40.909 0.00 0.00 0.00 0.98
3480 4136 5.313280 ACTATTGTTCCCCCGCATTATAA 57.687 39.130 0.00 0.00 0.00 0.98
3481 4137 5.697067 ACTATTGTTCCCCCGCATTATAAA 58.303 37.500 0.00 0.00 0.00 1.40
3482 4138 6.130569 ACTATTGTTCCCCCGCATTATAAAA 58.869 36.000 0.00 0.00 0.00 1.52
3483 4139 5.941555 ATTGTTCCCCCGCATTATAAAAA 57.058 34.783 0.00 0.00 0.00 1.94
3484 4140 4.993029 TGTTCCCCCGCATTATAAAAAG 57.007 40.909 0.00 0.00 0.00 2.27
3485 4141 4.601084 TGTTCCCCCGCATTATAAAAAGA 58.399 39.130 0.00 0.00 0.00 2.52
3486 4142 5.017490 TGTTCCCCCGCATTATAAAAAGAA 58.983 37.500 0.00 0.00 0.00 2.52
3487 4143 5.480772 TGTTCCCCCGCATTATAAAAAGAAA 59.519 36.000 0.00 0.00 0.00 2.52
3488 4144 6.014499 TGTTCCCCCGCATTATAAAAAGAAAA 60.014 34.615 0.00 0.00 0.00 2.29
3489 4145 6.607004 TCCCCCGCATTATAAAAAGAAAAA 57.393 33.333 0.00 0.00 0.00 1.94
3490 4146 6.635755 TCCCCCGCATTATAAAAAGAAAAAG 58.364 36.000 0.00 0.00 0.00 2.27
3491 4147 5.815222 CCCCCGCATTATAAAAAGAAAAAGG 59.185 40.000 0.00 0.00 0.00 3.11
3492 4148 6.351456 CCCCCGCATTATAAAAAGAAAAAGGA 60.351 38.462 0.00 0.00 0.00 3.36
3493 4149 7.100409 CCCCGCATTATAAAAAGAAAAAGGAA 58.900 34.615 0.00 0.00 0.00 3.36
3494 4150 7.604545 CCCCGCATTATAAAAAGAAAAAGGAAA 59.395 33.333 0.00 0.00 0.00 3.13
3495 4151 9.161629 CCCGCATTATAAAAAGAAAAAGGAAAT 57.838 29.630 0.00 0.00 0.00 2.17
3522 4178 6.463995 TTGTTGATTTTTCTAGTGGCAAGT 57.536 33.333 0.00 0.00 0.00 3.16
3523 4179 5.830912 TGTTGATTTTTCTAGTGGCAAGTG 58.169 37.500 0.00 0.00 0.00 3.16
3524 4180 5.592282 TGTTGATTTTTCTAGTGGCAAGTGA 59.408 36.000 0.00 0.00 0.00 3.41
3525 4181 6.096141 TGTTGATTTTTCTAGTGGCAAGTGAA 59.904 34.615 0.00 0.00 0.00 3.18
3526 4182 6.707440 TGATTTTTCTAGTGGCAAGTGAAA 57.293 33.333 0.00 0.00 0.00 2.69
3527 4183 7.106439 TGATTTTTCTAGTGGCAAGTGAAAA 57.894 32.000 14.48 14.48 35.63 2.29
3528 4184 7.725251 TGATTTTTCTAGTGGCAAGTGAAAAT 58.275 30.769 17.30 14.45 36.78 1.82
3529 4185 8.203485 TGATTTTTCTAGTGGCAAGTGAAAATT 58.797 29.630 17.30 14.90 36.78 1.82
3530 4186 8.962884 ATTTTTCTAGTGGCAAGTGAAAATTT 57.037 26.923 17.30 9.79 36.78 1.82
3532 4188 8.865590 TTTTCTAGTGGCAAGTGAAAATTTAC 57.134 30.769 14.48 0.00 33.48 2.01
3533 4189 6.236017 TCTAGTGGCAAGTGAAAATTTACG 57.764 37.500 0.00 0.00 0.00 3.18
3534 4190 5.992829 TCTAGTGGCAAGTGAAAATTTACGA 59.007 36.000 0.00 0.00 0.00 3.43
3535 4191 5.705609 AGTGGCAAGTGAAAATTTACGAT 57.294 34.783 0.00 0.00 0.00 3.73
3536 4192 6.811253 AGTGGCAAGTGAAAATTTACGATA 57.189 33.333 0.00 0.00 0.00 2.92
3537 4193 7.209471 AGTGGCAAGTGAAAATTTACGATAA 57.791 32.000 0.00 0.00 0.00 1.75
3538 4194 7.305474 AGTGGCAAGTGAAAATTTACGATAAG 58.695 34.615 0.00 0.00 0.00 1.73
3539 4195 7.040686 AGTGGCAAGTGAAAATTTACGATAAGT 60.041 33.333 0.00 0.00 0.00 2.24
3540 4196 7.593644 GTGGCAAGTGAAAATTTACGATAAGTT 59.406 33.333 0.00 0.00 0.00 2.66
3541 4197 8.784994 TGGCAAGTGAAAATTTACGATAAGTTA 58.215 29.630 0.00 0.00 0.00 2.24
3542 4198 9.783256 GGCAAGTGAAAATTTACGATAAGTTAT 57.217 29.630 0.00 0.00 0.00 1.89
3562 4218 9.965902 AAGTTATAGTTGGATTTTCAGATGACT 57.034 29.630 0.00 0.00 0.00 3.41
3568 4224 8.868522 AGTTGGATTTTCAGATGACTATTTGA 57.131 30.769 0.00 0.00 0.00 2.69
3569 4225 9.471702 AGTTGGATTTTCAGATGACTATTTGAT 57.528 29.630 0.00 0.00 28.74 2.57
3572 4228 9.246670 TGGATTTTCAGATGACTATTTGATTGT 57.753 29.630 0.00 0.00 28.74 2.71
3573 4229 9.727627 GGATTTTCAGATGACTATTTGATTGTC 57.272 33.333 0.00 0.00 35.92 3.18
3607 4263 9.654663 ATGAGTATATTTCCTAACTATTTCGCC 57.345 33.333 0.00 0.00 0.00 5.54
3608 4264 8.644216 TGAGTATATTTCCTAACTATTTCGCCA 58.356 33.333 0.00 0.00 0.00 5.69
3609 4265 9.485206 GAGTATATTTCCTAACTATTTCGCCAA 57.515 33.333 0.00 0.00 0.00 4.52
3610 4266 9.841295 AGTATATTTCCTAACTATTTCGCCAAA 57.159 29.630 0.00 0.00 0.00 3.28
3634 4290 2.907634 GGAAGTACCTTTCCTAGCTGC 58.092 52.381 0.00 0.00 42.73 5.25
3635 4291 2.420269 GGAAGTACCTTTCCTAGCTGCC 60.420 54.545 0.00 0.00 42.73 4.85
3636 4292 1.205055 AGTACCTTTCCTAGCTGCCC 58.795 55.000 0.00 0.00 0.00 5.36
3637 4293 1.205055 GTACCTTTCCTAGCTGCCCT 58.795 55.000 0.00 0.00 0.00 5.19
3638 4294 2.023307 AGTACCTTTCCTAGCTGCCCTA 60.023 50.000 0.00 0.00 0.00 3.53
3639 4295 1.966845 ACCTTTCCTAGCTGCCCTAA 58.033 50.000 0.00 0.00 0.00 2.69
3640 4296 2.275466 ACCTTTCCTAGCTGCCCTAAA 58.725 47.619 0.00 0.00 0.00 1.85
3641 4297 2.647802 ACCTTTCCTAGCTGCCCTAAAA 59.352 45.455 0.00 0.00 0.00 1.52
3642 4298 3.075432 ACCTTTCCTAGCTGCCCTAAAAA 59.925 43.478 0.00 0.00 0.00 1.94
3674 4330 6.043938 ACATTTCCACTAGTAGAAAACAGGGA 59.956 38.462 18.35 4.82 35.72 4.20
3727 4383 1.486726 GATTCAGTCCAGAACCGGGAT 59.513 52.381 6.32 0.00 36.67 3.85
3805 4461 1.065491 CATTGGTCCCGGTTCATCTGA 60.065 52.381 0.00 0.00 0.00 3.27
3922 4578 1.688187 GGCTCCCCTTTAGTCCCGA 60.688 63.158 0.00 0.00 0.00 5.14
4099 4756 3.676093 AGCCACACTACTTAAGCTTTCC 58.324 45.455 3.20 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.935955 GAACAAGACACCCACGCG 59.064 61.111 3.53 3.53 0.00 6.01
1 2 1.433837 AACGAACAAGACACCCACGC 61.434 55.000 0.00 0.00 0.00 5.34
2 3 0.580104 GAACGAACAAGACACCCACG 59.420 55.000 0.00 0.00 0.00 4.94
3 4 1.658994 TGAACGAACAAGACACCCAC 58.341 50.000 0.00 0.00 0.00 4.61
4 5 2.104111 AGATGAACGAACAAGACACCCA 59.896 45.455 0.00 0.00 0.00 4.51
5 6 2.737252 GAGATGAACGAACAAGACACCC 59.263 50.000 0.00 0.00 0.00 4.61
6 7 2.408704 CGAGATGAACGAACAAGACACC 59.591 50.000 0.00 0.00 0.00 4.16
7 8 2.159960 GCGAGATGAACGAACAAGACAC 60.160 50.000 0.00 0.00 0.00 3.67
8 9 2.058798 GCGAGATGAACGAACAAGACA 58.941 47.619 0.00 0.00 0.00 3.41
9 10 2.329379 AGCGAGATGAACGAACAAGAC 58.671 47.619 0.00 0.00 0.00 3.01
10 11 2.596452 GAGCGAGATGAACGAACAAGA 58.404 47.619 0.00 0.00 0.00 3.02
11 12 1.318785 CGAGCGAGATGAACGAACAAG 59.681 52.381 0.00 0.00 0.00 3.16
12 13 1.336877 CGAGCGAGATGAACGAACAA 58.663 50.000 0.00 0.00 0.00 2.83
13 14 1.071019 GCGAGCGAGATGAACGAACA 61.071 55.000 0.00 0.00 0.00 3.18
14 15 1.626388 GCGAGCGAGATGAACGAAC 59.374 57.895 0.00 0.00 0.00 3.95
15 16 1.516386 GGCGAGCGAGATGAACGAA 60.516 57.895 0.00 0.00 0.00 3.85
16 17 1.093496 TAGGCGAGCGAGATGAACGA 61.093 55.000 0.00 0.00 0.00 3.85
17 18 0.248498 TTAGGCGAGCGAGATGAACG 60.248 55.000 0.00 0.00 0.00 3.95
18 19 2.055100 GATTAGGCGAGCGAGATGAAC 58.945 52.381 0.00 0.00 0.00 3.18
19 20 1.957177 AGATTAGGCGAGCGAGATGAA 59.043 47.619 0.00 0.00 0.00 2.57
20 21 1.537638 GAGATTAGGCGAGCGAGATGA 59.462 52.381 0.00 0.00 0.00 2.92
21 22 1.268079 TGAGATTAGGCGAGCGAGATG 59.732 52.381 0.00 0.00 0.00 2.90
22 23 1.610363 TGAGATTAGGCGAGCGAGAT 58.390 50.000 0.00 0.00 0.00 2.75
23 24 1.389555 TTGAGATTAGGCGAGCGAGA 58.610 50.000 0.00 0.00 0.00 4.04
24 25 2.323959 GATTGAGATTAGGCGAGCGAG 58.676 52.381 0.00 0.00 0.00 5.03
25 26 1.000163 GGATTGAGATTAGGCGAGCGA 60.000 52.381 0.00 0.00 0.00 4.93
26 27 1.423395 GGATTGAGATTAGGCGAGCG 58.577 55.000 0.00 0.00 0.00 5.03
27 28 1.346068 AGGGATTGAGATTAGGCGAGC 59.654 52.381 0.00 0.00 0.00 5.03
28 29 3.367910 GCTAGGGATTGAGATTAGGCGAG 60.368 52.174 0.00 0.00 0.00 5.03
29 30 2.563179 GCTAGGGATTGAGATTAGGCGA 59.437 50.000 0.00 0.00 0.00 5.54
30 31 2.564947 AGCTAGGGATTGAGATTAGGCG 59.435 50.000 0.00 0.00 0.00 5.52
31 32 3.867984 GCAGCTAGGGATTGAGATTAGGC 60.868 52.174 0.00 0.00 0.00 3.93
32 33 3.307339 GGCAGCTAGGGATTGAGATTAGG 60.307 52.174 0.00 0.00 0.00 2.69
33 34 3.307339 GGGCAGCTAGGGATTGAGATTAG 60.307 52.174 0.00 0.00 0.00 1.73
34 35 2.639839 GGGCAGCTAGGGATTGAGATTA 59.360 50.000 0.00 0.00 0.00 1.75
35 36 1.423161 GGGCAGCTAGGGATTGAGATT 59.577 52.381 0.00 0.00 0.00 2.40
36 37 1.063183 GGGCAGCTAGGGATTGAGAT 58.937 55.000 0.00 0.00 0.00 2.75
37 38 1.056700 GGGGCAGCTAGGGATTGAGA 61.057 60.000 0.00 0.00 0.00 3.27
38 39 1.453669 GGGGCAGCTAGGGATTGAG 59.546 63.158 0.00 0.00 0.00 3.02
39 40 2.078665 GGGGGCAGCTAGGGATTGA 61.079 63.158 0.00 0.00 0.00 2.57
40 41 2.517919 GGGGGCAGCTAGGGATTG 59.482 66.667 0.00 0.00 0.00 2.67
41 42 3.171388 CGGGGGCAGCTAGGGATT 61.171 66.667 0.00 0.00 0.00 3.01
42 43 4.172232 TCGGGGGCAGCTAGGGAT 62.172 66.667 0.00 0.00 0.00 3.85
46 47 3.854669 CTGGTCGGGGGCAGCTAG 61.855 72.222 0.00 0.00 0.00 3.42
47 48 3.916438 TTCTGGTCGGGGGCAGCTA 62.916 63.158 0.00 0.00 0.00 3.32
50 51 4.760047 CGTTCTGGTCGGGGGCAG 62.760 72.222 0.00 0.00 0.00 4.85
55 56 3.642778 ATCGTGCGTTCTGGTCGGG 62.643 63.158 0.00 0.00 0.00 5.14
56 57 2.126071 ATCGTGCGTTCTGGTCGG 60.126 61.111 0.00 0.00 0.00 4.79
57 58 2.497092 CGATCGTGCGTTCTGGTCG 61.497 63.158 7.03 0.00 0.00 4.79
58 59 2.789203 GCGATCGTGCGTTCTGGTC 61.789 63.158 17.81 0.00 0.00 4.02
59 60 2.809601 GCGATCGTGCGTTCTGGT 60.810 61.111 17.81 0.00 0.00 4.00
60 61 2.507102 AGCGATCGTGCGTTCTGG 60.507 61.111 17.81 0.00 40.67 3.86
61 62 2.508891 GGAGCGATCGTGCGTTCTG 61.509 63.158 17.81 0.00 40.63 3.02
62 63 2.202623 GGAGCGATCGTGCGTTCT 60.203 61.111 17.81 3.46 40.63 3.01
63 64 3.255379 GGGAGCGATCGTGCGTTC 61.255 66.667 17.81 7.01 40.18 3.95
83 84 3.599285 TAGGGTTTCGGTGCAGGCG 62.599 63.158 0.00 0.00 0.00 5.52
84 85 0.891904 TTTAGGGTTTCGGTGCAGGC 60.892 55.000 0.00 0.00 0.00 4.85
85 86 0.879090 GTTTAGGGTTTCGGTGCAGG 59.121 55.000 0.00 0.00 0.00 4.85
86 87 0.515564 CGTTTAGGGTTTCGGTGCAG 59.484 55.000 0.00 0.00 0.00 4.41
87 88 0.885596 CCGTTTAGGGTTTCGGTGCA 60.886 55.000 0.00 0.00 38.45 4.57
88 89 1.871077 CCGTTTAGGGTTTCGGTGC 59.129 57.895 0.00 0.00 38.45 5.01
91 92 1.629345 GCGACCGTTTAGGGTTTCGG 61.629 60.000 0.00 0.00 46.96 4.30
92 93 1.783434 GCGACCGTTTAGGGTTTCG 59.217 57.895 0.00 0.00 46.96 3.46
93 94 0.667184 TCGCGACCGTTTAGGGTTTC 60.667 55.000 3.71 0.00 46.96 2.78
94 95 0.037046 ATCGCGACCGTTTAGGGTTT 60.037 50.000 12.93 0.00 46.96 3.27
95 96 0.738412 CATCGCGACCGTTTAGGGTT 60.738 55.000 12.93 0.00 46.96 4.11
96 97 1.153706 CATCGCGACCGTTTAGGGT 60.154 57.895 12.93 0.00 46.96 4.34
97 98 0.738412 AACATCGCGACCGTTTAGGG 60.738 55.000 12.93 0.00 46.96 3.53
99 100 1.585214 GGTAACATCGCGACCGTTTAG 59.415 52.381 25.29 7.82 35.54 1.85
100 101 1.627879 GGTAACATCGCGACCGTTTA 58.372 50.000 25.29 12.25 35.54 2.01
101 102 1.015607 GGGTAACATCGCGACCGTTT 61.016 55.000 25.29 13.13 39.74 3.60
102 103 1.446618 GGGTAACATCGCGACCGTT 60.447 57.895 24.05 24.05 39.74 4.44
103 104 1.031571 TAGGGTAACATCGCGACCGT 61.032 55.000 12.93 12.84 39.74 4.83
104 105 0.593263 GTAGGGTAACATCGCGACCG 60.593 60.000 12.93 8.67 39.74 4.79
105 106 0.457035 TGTAGGGTAACATCGCGACC 59.543 55.000 12.93 8.43 39.74 4.79
106 107 2.503920 ATGTAGGGTAACATCGCGAC 57.496 50.000 12.93 0.00 35.08 5.19
107 108 2.482316 CCAATGTAGGGTAACATCGCGA 60.482 50.000 13.09 13.09 39.16 5.87
108 109 1.864711 CCAATGTAGGGTAACATCGCG 59.135 52.381 0.00 0.00 39.16 5.87
109 110 2.612212 CACCAATGTAGGGTAACATCGC 59.388 50.000 0.00 0.00 39.16 4.58
110 111 3.869246 GTCACCAATGTAGGGTAACATCG 59.131 47.826 0.00 0.00 39.16 3.84
111 112 3.869246 CGTCACCAATGTAGGGTAACATC 59.131 47.826 0.00 0.00 39.16 3.06
112 113 3.370103 CCGTCACCAATGTAGGGTAACAT 60.370 47.826 0.00 0.00 41.87 2.71
113 114 2.027929 CCGTCACCAATGTAGGGTAACA 60.028 50.000 0.00 0.00 36.72 2.41
114 115 2.624636 CCGTCACCAATGTAGGGTAAC 58.375 52.381 0.00 0.00 36.72 2.50
115 116 1.065998 GCCGTCACCAATGTAGGGTAA 60.066 52.381 0.00 0.00 36.72 2.85
116 117 0.538118 GCCGTCACCAATGTAGGGTA 59.462 55.000 0.00 0.00 36.72 3.69
117 118 1.198759 AGCCGTCACCAATGTAGGGT 61.199 55.000 0.00 0.00 39.88 4.34
118 119 0.462047 GAGCCGTCACCAATGTAGGG 60.462 60.000 0.00 0.00 0.00 3.53
119 120 0.462047 GGAGCCGTCACCAATGTAGG 60.462 60.000 0.00 0.00 0.00 3.18
120 121 0.537188 AGGAGCCGTCACCAATGTAG 59.463 55.000 0.00 0.00 0.00 2.74
121 122 0.249120 CAGGAGCCGTCACCAATGTA 59.751 55.000 0.00 0.00 0.00 2.29
122 123 1.003355 CAGGAGCCGTCACCAATGT 60.003 57.895 0.00 0.00 0.00 2.71
123 124 0.606401 AACAGGAGCCGTCACCAATG 60.606 55.000 0.00 0.00 0.00 2.82
124 125 0.321653 GAACAGGAGCCGTCACCAAT 60.322 55.000 0.00 0.00 0.00 3.16
125 126 1.070786 GAACAGGAGCCGTCACCAA 59.929 57.895 0.00 0.00 0.00 3.67
126 127 1.837051 AGAACAGGAGCCGTCACCA 60.837 57.895 0.00 0.00 0.00 4.17
127 128 1.374758 CAGAACAGGAGCCGTCACC 60.375 63.158 0.00 0.00 0.00 4.02
128 129 0.247736 ATCAGAACAGGAGCCGTCAC 59.752 55.000 0.00 0.00 0.00 3.67
129 130 0.247460 CATCAGAACAGGAGCCGTCA 59.753 55.000 0.00 0.00 0.00 4.35
130 131 1.086634 GCATCAGAACAGGAGCCGTC 61.087 60.000 0.00 0.00 0.00 4.79
131 132 1.078848 GCATCAGAACAGGAGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
132 133 2.169789 CGCATCAGAACAGGAGCCG 61.170 63.158 0.00 0.00 0.00 5.52
133 134 2.467826 GCGCATCAGAACAGGAGCC 61.468 63.158 0.30 0.00 0.00 4.70
134 135 1.427592 GAGCGCATCAGAACAGGAGC 61.428 60.000 11.47 0.00 0.00 4.70
135 136 0.175302 AGAGCGCATCAGAACAGGAG 59.825 55.000 11.47 0.00 0.00 3.69
136 137 0.108472 CAGAGCGCATCAGAACAGGA 60.108 55.000 11.47 0.00 0.00 3.86
137 138 0.108472 TCAGAGCGCATCAGAACAGG 60.108 55.000 11.47 0.00 0.00 4.00
138 139 1.859703 GATCAGAGCGCATCAGAACAG 59.140 52.381 11.47 0.00 0.00 3.16
139 140 1.472201 GGATCAGAGCGCATCAGAACA 60.472 52.381 11.47 0.00 0.00 3.18
140 141 1.202510 AGGATCAGAGCGCATCAGAAC 60.203 52.381 11.47 5.65 0.00 3.01
141 142 1.117994 AGGATCAGAGCGCATCAGAA 58.882 50.000 11.47 0.00 0.00 3.02
142 143 1.986882 TAGGATCAGAGCGCATCAGA 58.013 50.000 11.47 7.29 0.00 3.27
143 144 2.608268 CATAGGATCAGAGCGCATCAG 58.392 52.381 11.47 1.27 0.00 2.90
144 145 1.274447 CCATAGGATCAGAGCGCATCA 59.726 52.381 11.47 0.00 0.00 3.07
145 146 1.405256 CCCATAGGATCAGAGCGCATC 60.405 57.143 11.47 3.08 33.47 3.91
146 147 0.612229 CCCATAGGATCAGAGCGCAT 59.388 55.000 11.47 0.00 33.47 4.73
147 148 2.052779 CCCATAGGATCAGAGCGCA 58.947 57.895 11.47 0.00 33.47 6.09
148 149 1.375268 GCCCATAGGATCAGAGCGC 60.375 63.158 0.00 0.00 33.47 5.92
149 150 1.190833 AGGCCCATAGGATCAGAGCG 61.191 60.000 0.00 0.00 33.47 5.03
150 151 1.063183 AAGGCCCATAGGATCAGAGC 58.937 55.000 0.00 0.00 33.47 4.09
151 152 4.081198 GTGATAAGGCCCATAGGATCAGAG 60.081 50.000 0.00 0.00 33.47 3.35
152 153 3.840666 GTGATAAGGCCCATAGGATCAGA 59.159 47.826 0.00 0.00 33.47 3.27
153 154 3.368843 CGTGATAAGGCCCATAGGATCAG 60.369 52.174 0.00 0.00 33.47 2.90
154 155 2.567169 CGTGATAAGGCCCATAGGATCA 59.433 50.000 0.00 0.00 33.47 2.92
155 156 2.678190 GCGTGATAAGGCCCATAGGATC 60.678 54.545 0.00 0.00 33.47 3.36
156 157 1.279271 GCGTGATAAGGCCCATAGGAT 59.721 52.381 0.00 0.00 33.47 3.24
157 158 0.685097 GCGTGATAAGGCCCATAGGA 59.315 55.000 0.00 0.00 33.47 2.94
158 159 0.321653 GGCGTGATAAGGCCCATAGG 60.322 60.000 1.90 0.00 43.64 2.57
159 160 3.233355 GGCGTGATAAGGCCCATAG 57.767 57.895 1.90 0.00 43.64 2.23
165 166 3.242518 GAACAAAAAGGCGTGATAAGGC 58.757 45.455 0.00 0.00 0.00 4.35
166 167 3.488489 CGAACAAAAAGGCGTGATAAGG 58.512 45.455 0.00 0.00 0.00 2.69
167 168 2.908626 GCGAACAAAAAGGCGTGATAAG 59.091 45.455 0.00 0.00 0.00 1.73
168 169 2.290916 TGCGAACAAAAAGGCGTGATAA 59.709 40.909 0.00 0.00 0.00 1.75
169 170 1.874231 TGCGAACAAAAAGGCGTGATA 59.126 42.857 0.00 0.00 0.00 2.15
170 171 0.665835 TGCGAACAAAAAGGCGTGAT 59.334 45.000 0.00 0.00 0.00 3.06
171 172 0.665835 ATGCGAACAAAAAGGCGTGA 59.334 45.000 0.00 0.00 0.00 4.35
172 173 0.777631 CATGCGAACAAAAAGGCGTG 59.222 50.000 0.00 0.00 36.25 5.34
173 174 0.383949 ACATGCGAACAAAAAGGCGT 59.616 45.000 0.00 0.00 0.00 5.68
174 175 0.777631 CACATGCGAACAAAAAGGCG 59.222 50.000 0.00 0.00 0.00 5.52
175 176 1.786579 GACACATGCGAACAAAAAGGC 59.213 47.619 0.00 0.00 0.00 4.35
176 177 3.300009 GAGACACATGCGAACAAAAAGG 58.700 45.455 0.00 0.00 0.00 3.11
177 178 2.966708 CGAGACACATGCGAACAAAAAG 59.033 45.455 0.00 0.00 0.00 2.27
178 179 2.353269 ACGAGACACATGCGAACAAAAA 59.647 40.909 0.00 0.00 0.00 1.94
179 180 1.937223 ACGAGACACATGCGAACAAAA 59.063 42.857 0.00 0.00 0.00 2.44
180 181 1.577468 ACGAGACACATGCGAACAAA 58.423 45.000 0.00 0.00 0.00 2.83
181 182 1.525197 GAACGAGACACATGCGAACAA 59.475 47.619 0.00 0.00 0.00 2.83
182 183 1.136690 GAACGAGACACATGCGAACA 58.863 50.000 0.00 0.00 0.00 3.18
183 184 0.091344 CGAACGAGACACATGCGAAC 59.909 55.000 0.00 0.00 0.00 3.95
184 185 0.318360 ACGAACGAGACACATGCGAA 60.318 50.000 0.14 0.00 0.00 4.70
185 186 0.318360 AACGAACGAGACACATGCGA 60.318 50.000 0.14 0.00 0.00 5.10
186 187 0.091344 GAACGAACGAGACACATGCG 59.909 55.000 0.14 0.00 0.00 4.73
187 188 1.136690 TGAACGAACGAGACACATGC 58.863 50.000 0.14 0.00 0.00 4.06
188 189 3.245797 AGATGAACGAACGAGACACATG 58.754 45.455 0.14 0.00 0.00 3.21
189 190 3.502920 GAGATGAACGAACGAGACACAT 58.497 45.455 0.14 0.00 0.00 3.21
197 198 1.903929 CGAGCGAGATGAACGAACG 59.096 57.895 0.00 0.00 0.00 3.95
236 237 1.515521 CTGGCAAACAAGTCGGGGAC 61.516 60.000 0.00 0.00 0.00 4.46
237 238 1.228124 CTGGCAAACAAGTCGGGGA 60.228 57.895 0.00 0.00 0.00 4.81
238 239 2.268076 CCTGGCAAACAAGTCGGGG 61.268 63.158 0.00 0.00 35.97 5.73
239 240 2.268076 CCCTGGCAAACAAGTCGGG 61.268 63.158 0.00 0.00 39.42 5.14
240 241 1.106944 AACCCTGGCAAACAAGTCGG 61.107 55.000 0.00 0.00 0.00 4.79
241 242 0.310854 GAACCCTGGCAAACAAGTCG 59.689 55.000 0.00 0.00 0.00 4.18
242 243 1.692411 AGAACCCTGGCAAACAAGTC 58.308 50.000 0.00 0.00 0.00 3.01
243 244 1.756538 CAAGAACCCTGGCAAACAAGT 59.243 47.619 0.00 0.00 0.00 3.16
244 245 1.756538 ACAAGAACCCTGGCAAACAAG 59.243 47.619 0.00 0.00 0.00 3.16
245 246 1.480137 CACAAGAACCCTGGCAAACAA 59.520 47.619 0.00 0.00 0.00 2.83
246 247 1.110442 CACAAGAACCCTGGCAAACA 58.890 50.000 0.00 0.00 0.00 2.83
247 248 1.111277 ACACAAGAACCCTGGCAAAC 58.889 50.000 0.00 0.00 0.00 2.93
248 249 1.480137 CAACACAAGAACCCTGGCAAA 59.520 47.619 0.00 0.00 0.00 3.68
249 250 1.110442 CAACACAAGAACCCTGGCAA 58.890 50.000 0.00 0.00 0.00 4.52
250 251 1.391157 GCAACACAAGAACCCTGGCA 61.391 55.000 0.00 0.00 0.00 4.92
251 252 1.363807 GCAACACAAGAACCCTGGC 59.636 57.895 0.00 0.00 0.00 4.85
252 253 1.795170 CGGCAACACAAGAACCCTGG 61.795 60.000 0.00 0.00 0.00 4.45
253 254 1.654220 CGGCAACACAAGAACCCTG 59.346 57.895 0.00 0.00 0.00 4.45
254 255 2.193536 GCGGCAACACAAGAACCCT 61.194 57.895 0.00 0.00 0.00 4.34
255 256 2.335011 GCGGCAACACAAGAACCC 59.665 61.111 0.00 0.00 0.00 4.11
256 257 2.335011 GGCGGCAACACAAGAACC 59.665 61.111 3.07 0.00 0.00 3.62
257 258 2.051345 CGGCGGCAACACAAGAAC 60.051 61.111 10.53 0.00 0.00 3.01
258 259 3.959975 GCGGCGGCAACACAAGAA 61.960 61.111 9.78 0.00 39.62 2.52
282 283 5.420409 ACCTAAATTTCTCAGATGACGACC 58.580 41.667 0.00 0.00 0.00 4.79
335 336 0.103208 CGAGGTTTCCCCATCTCTCG 59.897 60.000 0.00 0.00 38.17 4.04
341 342 1.490910 GAAGATCCGAGGTTTCCCCAT 59.509 52.381 0.00 0.00 34.66 4.00
348 350 0.253327 GGCCTTGAAGATCCGAGGTT 59.747 55.000 0.00 0.00 39.45 3.50
365 367 3.282021 TGATGGCAAAGAACATAGAGGC 58.718 45.455 0.00 0.00 0.00 4.70
386 388 9.761504 CTCACAAAACTATGATGATCACTAGAT 57.238 33.333 14.51 4.75 37.13 1.98
419 421 2.490903 CCACCAAAAGAGCATGAGGAAG 59.509 50.000 0.00 0.00 0.00 3.46
427 429 3.854856 GGCACCACCAAAAGAGCA 58.145 55.556 0.00 0.00 38.86 4.26
438 440 5.894298 AACTCTCTAATATCATGGCACCA 57.106 39.130 0.00 0.00 0.00 4.17
449 451 4.441634 GCGAGGGCAGAAAACTCTCTAATA 60.442 45.833 0.00 0.00 39.62 0.98
519 533 4.980434 CACAAAGAATCAGACCAGCAAAAG 59.020 41.667 0.00 0.00 0.00 2.27
525 540 4.277515 TCTCCACAAAGAATCAGACCAG 57.722 45.455 0.00 0.00 0.00 4.00
546 561 2.294791 TGGCGTCGACCAAAAATTTCAT 59.705 40.909 10.58 0.00 36.55 2.57
553 568 2.281208 CCCTGGCGTCGACCAAAA 60.281 61.111 10.58 0.00 39.86 2.44
557 572 3.934391 CTTCACCCTGGCGTCGACC 62.934 68.421 10.58 2.55 0.00 4.79
558 573 2.227089 ATCTTCACCCTGGCGTCGAC 62.227 60.000 5.18 5.18 0.00 4.20
568 583 5.696724 CCGTTGAATCACTATATCTTCACCC 59.303 44.000 0.00 0.00 0.00 4.61
588 603 1.296715 CCTAGAAGTGCAGGCCGTT 59.703 57.895 0.00 0.00 0.00 4.44
620 635 3.861276 TGATCGATGAACGTACTTGGT 57.139 42.857 0.54 0.00 43.13 3.67
711 726 5.475909 AGCAATGATGTTGTCACTCTTTCAT 59.524 36.000 0.00 0.00 40.28 2.57
730 745 1.822990 CTGCAATTGGACTGGAGCAAT 59.177 47.619 7.72 0.00 0.00 3.56
781 796 4.563061 TCATGATGTCAATCTATGCTCGG 58.437 43.478 0.00 0.00 33.61 4.63
788 803 8.408043 AAAAACACCTTCATGATGTCAATCTA 57.592 30.769 0.00 0.00 33.61 1.98
937 955 3.126343 CGTGTGTTTTAGCCAGGGATAAC 59.874 47.826 0.00 0.00 0.00 1.89
938 956 3.008157 TCGTGTGTTTTAGCCAGGGATAA 59.992 43.478 0.00 0.00 0.00 1.75
939 957 2.568062 TCGTGTGTTTTAGCCAGGGATA 59.432 45.455 0.00 0.00 0.00 2.59
940 958 1.349688 TCGTGTGTTTTAGCCAGGGAT 59.650 47.619 0.00 0.00 0.00 3.85
941 959 0.759959 TCGTGTGTTTTAGCCAGGGA 59.240 50.000 0.00 0.00 0.00 4.20
942 960 1.737793 GATCGTGTGTTTTAGCCAGGG 59.262 52.381 0.00 0.00 0.00 4.45
943 961 1.393539 CGATCGTGTGTTTTAGCCAGG 59.606 52.381 7.03 0.00 0.00 4.45
944 962 1.201921 GCGATCGTGTGTTTTAGCCAG 60.202 52.381 17.81 0.00 0.00 4.85
945 963 0.793861 GCGATCGTGTGTTTTAGCCA 59.206 50.000 17.81 0.00 0.00 4.75
946 964 1.076332 AGCGATCGTGTGTTTTAGCC 58.924 50.000 17.81 0.00 0.00 3.93
947 965 2.028883 GGTAGCGATCGTGTGTTTTAGC 59.971 50.000 17.81 4.67 0.00 3.09
948 966 2.278094 CGGTAGCGATCGTGTGTTTTAG 59.722 50.000 17.81 0.00 0.00 1.85
949 967 2.252747 CGGTAGCGATCGTGTGTTTTA 58.747 47.619 17.81 0.00 0.00 1.52
950 968 1.065358 CGGTAGCGATCGTGTGTTTT 58.935 50.000 17.81 0.00 0.00 2.43
951 969 1.349259 GCGGTAGCGATCGTGTGTTT 61.349 55.000 20.16 0.00 0.00 2.83
952 970 1.804326 GCGGTAGCGATCGTGTGTT 60.804 57.895 20.16 0.52 0.00 3.32
953 971 2.202570 GCGGTAGCGATCGTGTGT 60.203 61.111 20.16 1.88 0.00 3.72
954 972 2.954868 GGCGGTAGCGATCGTGTG 60.955 66.667 20.16 3.93 46.35 3.82
955 973 4.547905 CGGCGGTAGCGATCGTGT 62.548 66.667 20.16 7.17 46.35 4.49
991 1010 4.071875 TGGTAACATCGCGGCCGT 62.072 61.111 28.70 8.14 46.17 5.68
1016 1035 1.524621 CCTGCAGGAAGGTATGGCG 60.525 63.158 29.88 0.00 37.39 5.69
1035 1054 4.603946 GGATCACGGGGGTAGCGC 62.604 72.222 0.00 0.00 0.00 5.92
1057 1076 2.102084 GGTCGGAGGGGTATGTTAAGTC 59.898 54.545 0.00 0.00 0.00 3.01
1058 1077 2.113807 GGTCGGAGGGGTATGTTAAGT 58.886 52.381 0.00 0.00 0.00 2.24
1059 1078 2.395619 AGGTCGGAGGGGTATGTTAAG 58.604 52.381 0.00 0.00 0.00 1.85
1060 1079 2.555732 AGGTCGGAGGGGTATGTTAA 57.444 50.000 0.00 0.00 0.00 2.01
1061 1080 3.909427 ATAGGTCGGAGGGGTATGTTA 57.091 47.619 0.00 0.00 0.00 2.41
1062 1081 2.789323 ATAGGTCGGAGGGGTATGTT 57.211 50.000 0.00 0.00 0.00 2.71
1063 1082 2.704065 CAAATAGGTCGGAGGGGTATGT 59.296 50.000 0.00 0.00 0.00 2.29
1064 1083 2.038557 CCAAATAGGTCGGAGGGGTATG 59.961 54.545 0.00 0.00 0.00 2.39
1065 1084 2.335933 CCAAATAGGTCGGAGGGGTAT 58.664 52.381 0.00 0.00 0.00 2.73
1066 1085 1.797320 CCAAATAGGTCGGAGGGGTA 58.203 55.000 0.00 0.00 0.00 3.69
1067 1086 2.616489 CCAAATAGGTCGGAGGGGT 58.384 57.895 0.00 0.00 0.00 4.95
1077 1096 2.900337 GGCGCGGGACCAAATAGG 60.900 66.667 8.83 0.00 45.67 2.57
1078 1097 2.900337 GGGCGCGGGACCAAATAG 60.900 66.667 21.48 0.00 42.95 1.73
1079 1098 4.493049 GGGGCGCGGGACCAAATA 62.493 66.667 27.57 0.00 46.61 1.40
1093 1112 3.432051 GATCGTGGAGACGCTGGGG 62.432 68.421 0.00 0.00 45.68 4.96
1094 1113 2.105128 GATCGTGGAGACGCTGGG 59.895 66.667 0.00 0.00 45.68 4.45
1095 1114 1.101635 TAGGATCGTGGAGACGCTGG 61.102 60.000 0.00 0.00 45.68 4.85
1096 1115 0.309302 CTAGGATCGTGGAGACGCTG 59.691 60.000 0.00 0.00 45.68 5.18
1097 1116 1.448922 GCTAGGATCGTGGAGACGCT 61.449 60.000 2.62 0.00 45.68 5.07
1098 1117 1.008309 GCTAGGATCGTGGAGACGC 60.008 63.158 2.62 0.00 45.68 5.19
1100 1119 0.589223 CTCGCTAGGATCGTGGAGAC 59.411 60.000 2.62 0.00 0.00 3.36
1101 1120 1.167155 GCTCGCTAGGATCGTGGAGA 61.167 60.000 13.65 10.02 0.00 3.71
1102 1121 1.284408 GCTCGCTAGGATCGTGGAG 59.716 63.158 2.62 0.00 0.00 3.86
1103 1122 1.448119 CTGCTCGCTAGGATCGTGGA 61.448 60.000 2.62 0.00 0.00 4.02
1199 1525 4.386954 CCGGATCATCATGTTTGTCGATAG 59.613 45.833 0.00 0.00 0.00 2.08
1214 1540 2.109799 CCTTGAGCGCCGGATCAT 59.890 61.111 5.05 0.00 38.57 2.45
1240 1566 5.670792 TGAAAATATGGAGGAGTGTACGT 57.329 39.130 0.00 0.00 0.00 3.57
1253 1580 9.318041 CCGCTACGAAGATTAATTGAAAATATG 57.682 33.333 0.00 0.00 0.00 1.78
1318 1935 8.177980 GCTCTGAAGCTACAAAAATAATTTGG 57.822 34.615 5.96 0.00 45.55 3.28
1456 2073 0.545309 CTGTCACCCCTTCCTCCTCA 60.545 60.000 0.00 0.00 0.00 3.86
1457 2074 0.252284 TCTGTCACCCCTTCCTCCTC 60.252 60.000 0.00 0.00 0.00 3.71
1458 2075 0.545548 GTCTGTCACCCCTTCCTCCT 60.546 60.000 0.00 0.00 0.00 3.69
1505 2122 1.363744 GTCGCAGTTCTGGAGAATGG 58.636 55.000 1.97 0.00 36.33 3.16
1518 2135 1.926561 TGGAGATCAAATCGTCGCAG 58.073 50.000 0.00 0.00 0.00 5.18
1631 2253 0.037605 GTCACTCCTTACCCACACCG 60.038 60.000 0.00 0.00 0.00 4.94
1701 2323 1.557269 GGGCAGACCACTCATGTCCT 61.557 60.000 0.00 0.00 35.77 3.85
1752 2374 0.303493 AAACGCATGCGCCTATTACG 59.697 50.000 38.15 10.95 44.19 3.18
1754 2376 1.532921 GCAAAACGCATGCGCCTATTA 60.533 47.619 38.15 0.00 44.19 0.98
1779 2401 6.301486 TCTGTATATACGGTGGTGACAGTAT 58.699 40.000 19.03 0.00 43.38 2.12
1802 2424 3.054361 ACTGGTGGAAGTATGATGGGTTC 60.054 47.826 0.00 0.00 0.00 3.62
1810 2432 5.361285 AGACTAGCTTACTGGTGGAAGTATG 59.639 44.000 0.00 0.00 37.81 2.39
1867 2491 4.774124 ACACATGCATAGATAGCACAAGT 58.226 39.130 0.00 0.00 45.95 3.16
1925 2550 5.116180 TCGCGATATCCAAGAGTTGATTTT 58.884 37.500 3.71 0.00 0.00 1.82
2066 2691 3.247006 TCTCTGCAGGGACGATTAAAC 57.753 47.619 13.72 0.00 0.00 2.01
2131 2756 6.581712 AGCAACAAACAAGTTATGTGGAAAT 58.418 32.000 6.75 0.00 42.99 2.17
2176 2801 6.653020 ACCAACATACATCTCACACATACAT 58.347 36.000 0.00 0.00 0.00 2.29
2177 2802 6.048732 ACCAACATACATCTCACACATACA 57.951 37.500 0.00 0.00 0.00 2.29
2256 2881 2.438763 TCACCCCGAAAAACAGAGGTAA 59.561 45.455 0.00 0.00 0.00 2.85
2293 2926 9.668497 GGAATATTGGGGATCAAGTATAGTTAC 57.332 37.037 0.00 0.00 38.95 2.50
2294 2927 9.629649 AGGAATATTGGGGATCAAGTATAGTTA 57.370 33.333 0.00 0.00 38.95 2.24
2295 2928 8.525729 AGGAATATTGGGGATCAAGTATAGTT 57.474 34.615 0.00 0.00 38.95 2.24
2296 2929 9.047947 GTAGGAATATTGGGGATCAAGTATAGT 57.952 37.037 0.00 0.00 38.95 2.12
2297 2930 9.046846 TGTAGGAATATTGGGGATCAAGTATAG 57.953 37.037 0.00 0.00 38.95 1.31
2300 2933 6.849697 ACTGTAGGAATATTGGGGATCAAGTA 59.150 38.462 0.00 0.00 38.95 2.24
2301 2934 5.672194 ACTGTAGGAATATTGGGGATCAAGT 59.328 40.000 0.00 0.00 38.95 3.16
2302 2935 6.192970 ACTGTAGGAATATTGGGGATCAAG 57.807 41.667 0.00 0.00 38.95 3.02
2374 3013 7.241376 CCAACCGCTTCAACTTTTATAAGTAG 58.759 38.462 0.00 0.00 43.74 2.57
2419 3058 4.182693 TGCATGCCATTTTTCTCTTCTG 57.817 40.909 16.68 0.00 0.00 3.02
2500 3142 7.604549 ACAATGCACATCATGTTCAGATAAAA 58.395 30.769 0.00 0.00 35.13 1.52
2508 3150 9.229784 CTAAATAAGACAATGCACATCATGTTC 57.770 33.333 0.00 0.00 35.13 3.18
2543 3185 2.094675 GATACAAGCCTGTGCCAACAT 58.905 47.619 0.00 0.00 38.69 2.71
2544 3186 1.073763 AGATACAAGCCTGTGCCAACA 59.926 47.619 0.00 0.00 38.69 3.33
2573 3218 8.958119 ACAACTCTTGTTAGAACTAAACATGA 57.042 30.769 0.00 0.00 42.22 3.07
2590 3235 7.234355 AGGAATCCTACAATTTGACAACTCTT 58.766 34.615 0.00 0.00 28.47 2.85
2626 3271 1.676014 CCTCGACAAGGGCTACAAAGG 60.676 57.143 0.00 0.00 42.03 3.11
2795 3440 0.609957 TCCAAGCTGAACAGGCCATG 60.610 55.000 5.01 2.64 0.00 3.66
2796 3441 0.610232 GTCCAAGCTGAACAGGCCAT 60.610 55.000 5.01 0.00 0.00 4.40
3159 3804 4.392138 GGGGTGTCTTCTTCACTTATTTCG 59.608 45.833 0.00 0.00 36.25 3.46
3266 3919 4.142381 ACAAGTCTGACCTCAAACTTTTGC 60.142 41.667 3.76 0.00 38.05 3.68
3269 3922 5.253330 TCAACAAGTCTGACCTCAAACTTT 58.747 37.500 3.76 0.00 29.78 2.66
3360 4014 5.995446 TGCAACCAAACTAAAGGGAAAATT 58.005 33.333 0.00 0.00 0.00 1.82
3399 4054 7.546778 AACGCCAAAGAACAAAAATTACAAT 57.453 28.000 0.00 0.00 0.00 2.71
3406 4061 5.924475 TGAAAAACGCCAAAGAACAAAAA 57.076 30.435 0.00 0.00 0.00 1.94
3409 4064 3.868077 CCATGAAAAACGCCAAAGAACAA 59.132 39.130 0.00 0.00 0.00 2.83
3411 4066 3.712187 TCCATGAAAAACGCCAAAGAAC 58.288 40.909 0.00 0.00 0.00 3.01
3442 4098 4.277174 ACAATAGTTTGTTCAATCACGGCA 59.723 37.500 0.00 0.00 43.57 5.69
3443 4099 4.794169 ACAATAGTTTGTTCAATCACGGC 58.206 39.130 0.00 0.00 43.57 5.68
3455 4111 1.540267 TGCGGGGGAACAATAGTTTG 58.460 50.000 0.00 0.00 38.30 2.93
3456 4112 2.525105 ATGCGGGGGAACAATAGTTT 57.475 45.000 0.00 0.00 38.30 2.66
3457 4113 2.525105 AATGCGGGGGAACAATAGTT 57.475 45.000 0.00 0.00 41.64 2.24
3458 4114 3.876309 ATAATGCGGGGGAACAATAGT 57.124 42.857 0.00 0.00 0.00 2.12
3459 4115 6.642707 TTTTATAATGCGGGGGAACAATAG 57.357 37.500 0.00 0.00 0.00 1.73
3460 4116 6.834451 TCTTTTTATAATGCGGGGGAACAATA 59.166 34.615 0.00 0.00 0.00 1.90
3461 4117 5.659079 TCTTTTTATAATGCGGGGGAACAAT 59.341 36.000 0.00 0.00 0.00 2.71
3462 4118 5.017490 TCTTTTTATAATGCGGGGGAACAA 58.983 37.500 0.00 0.00 0.00 2.83
3463 4119 4.601084 TCTTTTTATAATGCGGGGGAACA 58.399 39.130 0.00 0.00 0.00 3.18
3464 4120 5.585820 TTCTTTTTATAATGCGGGGGAAC 57.414 39.130 0.00 0.00 0.00 3.62
3465 4121 6.607004 TTTTCTTTTTATAATGCGGGGGAA 57.393 33.333 0.00 0.00 0.00 3.97
3466 4122 6.351456 CCTTTTTCTTTTTATAATGCGGGGGA 60.351 38.462 0.00 0.00 0.00 4.81
3467 4123 5.815222 CCTTTTTCTTTTTATAATGCGGGGG 59.185 40.000 0.00 0.00 0.00 5.40
3468 4124 6.635755 TCCTTTTTCTTTTTATAATGCGGGG 58.364 36.000 0.00 0.00 0.00 5.73
3469 4125 8.541133 TTTCCTTTTTCTTTTTATAATGCGGG 57.459 30.769 0.00 0.00 0.00 6.13
3496 4152 8.806146 ACTTGCCACTAGAAAAATCAACAATAT 58.194 29.630 0.00 0.00 0.00 1.28
3497 4153 8.081633 CACTTGCCACTAGAAAAATCAACAATA 58.918 33.333 0.00 0.00 0.00 1.90
3498 4154 6.925165 CACTTGCCACTAGAAAAATCAACAAT 59.075 34.615 0.00 0.00 0.00 2.71
3499 4155 6.096141 TCACTTGCCACTAGAAAAATCAACAA 59.904 34.615 0.00 0.00 0.00 2.83
3500 4156 5.592282 TCACTTGCCACTAGAAAAATCAACA 59.408 36.000 0.00 0.00 0.00 3.33
3501 4157 6.072112 TCACTTGCCACTAGAAAAATCAAC 57.928 37.500 0.00 0.00 0.00 3.18
3502 4158 6.707440 TTCACTTGCCACTAGAAAAATCAA 57.293 33.333 0.00 0.00 0.00 2.57
3503 4159 6.707440 TTTCACTTGCCACTAGAAAAATCA 57.293 33.333 0.00 0.00 0.00 2.57
3504 4160 8.593492 AATTTTCACTTGCCACTAGAAAAATC 57.407 30.769 0.00 0.00 40.32 2.17
3505 4161 8.962884 AAATTTTCACTTGCCACTAGAAAAAT 57.037 26.923 0.00 0.00 40.32 1.82
3506 4162 9.308318 GTAAATTTTCACTTGCCACTAGAAAAA 57.692 29.630 0.00 0.00 40.32 1.94
3507 4163 7.646130 CGTAAATTTTCACTTGCCACTAGAAAA 59.354 33.333 0.00 0.00 40.93 2.29
3508 4164 7.012515 TCGTAAATTTTCACTTGCCACTAGAAA 59.987 33.333 0.00 0.00 0.00 2.52
3509 4165 6.483974 TCGTAAATTTTCACTTGCCACTAGAA 59.516 34.615 0.00 0.00 0.00 2.10
3510 4166 5.992829 TCGTAAATTTTCACTTGCCACTAGA 59.007 36.000 0.00 0.00 0.00 2.43
3511 4167 6.236017 TCGTAAATTTTCACTTGCCACTAG 57.764 37.500 0.00 0.00 0.00 2.57
3512 4168 6.811253 ATCGTAAATTTTCACTTGCCACTA 57.189 33.333 0.00 0.00 0.00 2.74
3513 4169 5.705609 ATCGTAAATTTTCACTTGCCACT 57.294 34.783 0.00 0.00 0.00 4.00
3514 4170 7.081976 ACTTATCGTAAATTTTCACTTGCCAC 58.918 34.615 0.00 0.00 0.00 5.01
3515 4171 7.209471 ACTTATCGTAAATTTTCACTTGCCA 57.791 32.000 0.00 0.00 0.00 4.92
3516 4172 9.783256 ATAACTTATCGTAAATTTTCACTTGCC 57.217 29.630 0.00 0.00 0.00 4.52
3536 4192 9.965902 AGTCATCTGAAAATCCAACTATAACTT 57.034 29.630 0.00 0.00 0.00 2.66
3542 4198 9.958180 TCAAATAGTCATCTGAAAATCCAACTA 57.042 29.630 0.00 0.00 0.00 2.24
3543 4199 8.868522 TCAAATAGTCATCTGAAAATCCAACT 57.131 30.769 0.00 0.00 0.00 3.16
3546 4202 9.246670 ACAATCAAATAGTCATCTGAAAATCCA 57.753 29.630 0.00 0.00 0.00 3.41
3547 4203 9.727627 GACAATCAAATAGTCATCTGAAAATCC 57.272 33.333 0.00 0.00 32.68 3.01
3581 4237 9.654663 GGCGAAATAGTTAGGAAATATACTCAT 57.345 33.333 0.00 0.00 0.00 2.90
3582 4238 8.644216 TGGCGAAATAGTTAGGAAATATACTCA 58.356 33.333 0.00 0.00 0.00 3.41
3583 4239 9.485206 TTGGCGAAATAGTTAGGAAATATACTC 57.515 33.333 0.00 0.00 0.00 2.59
3584 4240 9.841295 TTTGGCGAAATAGTTAGGAAATATACT 57.159 29.630 0.00 0.00 0.00 2.12
3618 4274 1.205055 AGGGCAGCTAGGAAAGGTAC 58.795 55.000 0.00 0.00 33.59 3.34
3619 4275 2.860817 TAGGGCAGCTAGGAAAGGTA 57.139 50.000 0.00 0.00 33.59 3.08
3620 4276 1.966845 TTAGGGCAGCTAGGAAAGGT 58.033 50.000 0.00 0.00 35.94 3.50
3621 4277 3.366052 TTTTAGGGCAGCTAGGAAAGG 57.634 47.619 0.00 0.00 0.00 3.11
3643 4299 9.708092 GTTTTCTACTAGTGGAAATGTACTCTT 57.292 33.333 28.38 0.00 39.28 2.85
3644 4300 8.867097 TGTTTTCTACTAGTGGAAATGTACTCT 58.133 33.333 28.38 0.00 39.28 3.24
3645 4301 9.141400 CTGTTTTCTACTAGTGGAAATGTACTC 57.859 37.037 28.38 16.94 39.28 2.59
3646 4302 8.095169 CCTGTTTTCTACTAGTGGAAATGTACT 58.905 37.037 28.38 0.00 39.28 2.73
3647 4303 7.333672 CCCTGTTTTCTACTAGTGGAAATGTAC 59.666 40.741 28.38 23.77 39.28 2.90
3648 4304 7.236019 TCCCTGTTTTCTACTAGTGGAAATGTA 59.764 37.037 28.38 18.44 39.28 2.29
3649 4305 6.043938 TCCCTGTTTTCTACTAGTGGAAATGT 59.956 38.462 28.38 0.00 39.28 2.71
3650 4306 6.472887 TCCCTGTTTTCTACTAGTGGAAATG 58.527 40.000 28.38 21.30 39.28 2.32
3651 4307 6.697641 TCCCTGTTTTCTACTAGTGGAAAT 57.302 37.500 28.38 0.00 39.28 2.17
3652 4308 6.697641 ATCCCTGTTTTCTACTAGTGGAAA 57.302 37.500 25.42 25.42 38.10 3.13
3653 4309 6.697641 AATCCCTGTTTTCTACTAGTGGAA 57.302 37.500 16.90 16.90 0.00 3.53
3654 4310 6.472887 CAAATCCCTGTTTTCTACTAGTGGA 58.527 40.000 4.58 4.58 0.00 4.02
3674 4330 3.264845 ACCCGGCCTGGACCAAAT 61.265 61.111 21.63 0.00 42.00 2.32
3784 4440 1.065491 CAGATGAACCGGGACCAATGA 60.065 52.381 6.32 0.00 0.00 2.57
3805 4461 0.757561 CCAACCGGGACCAAAAGGTT 60.758 55.000 6.32 6.98 46.76 3.50
3922 4578 1.682005 CCCGGTTGGTGGCATGAAT 60.682 57.895 0.00 0.00 0.00 2.57
4099 4756 2.373224 GAAAATGGAGCTTGGAGAGGG 58.627 52.381 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.