Multiple sequence alignment - TraesCS7A01G369100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G369100 chr7A 100.000 4152 0 0 1 4152 542711701 542707550 0.000000e+00 7668.0
1 TraesCS7A01G369100 chr7A 95.680 949 40 1 1 949 542719672 542718725 0.000000e+00 1524.0
2 TraesCS7A01G369100 chr7A 88.013 317 35 3 356 671 660558607 660558921 5.070000e-99 372.0
3 TraesCS7A01G369100 chr7A 87.821 312 33 1 360 671 248163181 248162875 1.100000e-95 361.0
4 TraesCS7A01G369100 chr7A 89.706 272 27 1 398 669 663287913 663287643 3.070000e-91 346.0
5 TraesCS7A01G369100 chr7A 89.630 270 28 0 401 670 207090415 207090146 1.110000e-90 344.0
6 TraesCS7A01G369100 chr7A 89.091 275 24 4 398 672 652902482 652902214 1.850000e-88 337.0
7 TraesCS7A01G369100 chr7B 91.830 2142 114 40 1953 4077 479781947 479784044 0.000000e+00 2929.0
8 TraesCS7A01G369100 chr7B 84.205 994 77 31 669 1631 479780779 479781723 0.000000e+00 893.0
9 TraesCS7A01G369100 chr7B 97.368 38 1 0 1633 1670 479781747 479781784 9.630000e-07 65.8
10 TraesCS7A01G369100 chrUn 84.863 1024 95 30 2533 3521 92185012 92184014 0.000000e+00 977.0
11 TraesCS7A01G369100 chrUn 100.000 73 0 0 1674 1746 263385948 263385876 7.240000e-28 135.0
12 TraesCS7A01G369100 chrUn 100.000 73 0 0 1674 1746 344444754 344444682 7.240000e-28 135.0
13 TraesCS7A01G369100 chrUn 86.567 67 7 2 4012 4077 92184019 92183954 5.760000e-09 73.1
14 TraesCS7A01G369100 chr7D 85.348 935 68 26 740 1644 458010680 458011575 0.000000e+00 904.0
15 TraesCS7A01G369100 chr7D 85.075 871 92 23 2540 3391 458012462 458013313 0.000000e+00 854.0
16 TraesCS7A01G369100 chr4A 88.782 312 28 3 360 670 467292824 467292519 3.920000e-100 375.0
17 TraesCS7A01G369100 chr4A 93.182 88 5 1 1674 1761 4152040 4151954 1.210000e-25 128.0
18 TraesCS7A01G369100 chr3A 86.859 312 26 5 360 671 714586689 714586985 6.650000e-88 335.0
19 TraesCS7A01G369100 chr3A 80.000 155 22 8 3541 3695 594495567 594495712 5.680000e-19 106.0
20 TraesCS7A01G369100 chr3A 80.734 109 19 2 146 252 493699192 493699300 2.660000e-12 84.2
21 TraesCS7A01G369100 chr3A 79.817 109 20 2 146 252 11385373 11385481 1.240000e-10 78.7
22 TraesCS7A01G369100 chr1A 89.051 274 25 1 398 671 492186213 492186481 6.650000e-88 335.0
23 TraesCS7A01G369100 chr5B 80.749 374 43 19 3592 3955 474576499 474576853 8.850000e-67 265.0
24 TraesCS7A01G369100 chr5B 98.701 77 1 0 1674 1750 255972666 255972742 2.010000e-28 137.0
25 TraesCS7A01G369100 chr5B 73.939 330 45 22 3538 3862 706687730 706687437 1.230000e-15 95.3
26 TraesCS7A01G369100 chr3D 96.429 84 1 2 1674 1756 322709948 322709866 2.010000e-28 137.0
27 TraesCS7A01G369100 chr3D 90.476 63 4 2 3531 3593 522778981 522779041 9.570000e-12 82.4
28 TraesCS7A01G369100 chr3D 85.000 80 8 3 4076 4152 570108430 570108352 1.240000e-10 78.7
29 TraesCS7A01G369100 chr3D 100.000 28 0 0 3867 3894 523641250 523641277 8.000000e-03 52.8
30 TraesCS7A01G369100 chr4D 100.000 73 0 0 1674 1746 216743481 216743553 7.240000e-28 135.0
31 TraesCS7A01G369100 chr4D 83.168 101 13 3 156 252 471231289 471231189 5.720000e-14 89.8
32 TraesCS7A01G369100 chr4D 83.158 95 10 6 3833 3925 6024784 6024694 9.570000e-12 82.4
33 TraesCS7A01G369100 chr2B 97.468 79 2 0 1674 1752 127159513 127159435 7.240000e-28 135.0
34 TraesCS7A01G369100 chr2B 87.209 86 11 0 162 247 63777443 63777528 9.500000e-17 99.0
35 TraesCS7A01G369100 chr3B 98.684 76 0 1 1669 1744 495236217 495236291 2.600000e-27 134.0
36 TraesCS7A01G369100 chr3B 84.545 110 11 5 146 252 594831428 594831322 2.040000e-18 104.0
37 TraesCS7A01G369100 chr3B 80.000 115 20 3 146 258 684258161 684258048 9.570000e-12 82.4
38 TraesCS7A01G369100 chr3B 79.747 79 14 1 4076 4152 654688767 654688845 5.800000e-04 56.5
39 TraesCS7A01G369100 chr6B 96.296 81 1 2 1674 1752 238140973 238140893 9.370000e-27 132.0
40 TraesCS7A01G369100 chr6A 83.486 109 16 2 146 252 485863560 485863668 2.640000e-17 100.0
41 TraesCS7A01G369100 chr6A 83.544 79 11 1 4076 4152 64174549 64174627 5.760000e-09 73.1
42 TraesCS7A01G369100 chr6A 97.222 36 1 0 4117 4152 153386994 153386959 1.250000e-05 62.1
43 TraesCS7A01G369100 chr5A 82.727 110 14 3 146 252 564321150 564321257 4.420000e-15 93.5
44 TraesCS7A01G369100 chr5A 79.268 82 15 1 4073 4152 491174776 491174695 5.800000e-04 56.5
45 TraesCS7A01G369100 chr5D 82.278 79 12 1 4076 4152 561953459 561953381 2.680000e-07 67.6
46 TraesCS7A01G369100 chr5D 90.196 51 3 1 4104 4152 160901723 160901673 9.630000e-07 65.8
47 TraesCS7A01G369100 chr2D 82.278 79 12 1 4076 4152 20687253 20687331 2.680000e-07 67.6
48 TraesCS7A01G369100 chr6D 87.500 56 5 1 4099 4152 387818984 387818929 3.470000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G369100 chr7A 542707550 542711701 4151 True 7668.000000 7668 100.000000 1 4152 1 chr7A.!!$R3 4151
1 TraesCS7A01G369100 chr7A 542718725 542719672 947 True 1524.000000 1524 95.680000 1 949 1 chr7A.!!$R4 948
2 TraesCS7A01G369100 chr7B 479780779 479784044 3265 False 1295.933333 2929 91.134333 669 4077 3 chr7B.!!$F1 3408
3 TraesCS7A01G369100 chrUn 92183954 92185012 1058 True 525.050000 977 85.715000 2533 4077 2 chrUn.!!$R3 1544
4 TraesCS7A01G369100 chr7D 458010680 458013313 2633 False 879.000000 904 85.211500 740 3391 2 chr7D.!!$F1 2651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
198 199 0.587242 GTGCGTGCATGCGTTCATAG 60.587 55.0 25.05 0.04 37.81 2.23 F
1464 1520 0.251787 ATCCCTGTTTCCACTTGCCC 60.252 55.0 0.00 0.00 0.00 5.36 F
1470 1526 0.249447 GTTTCCACTTGCCCAGTTGC 60.249 55.0 0.00 0.00 30.92 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1467 1523 0.535780 CTGTCTTCAGTGGCAGGCAA 60.536 55.0 0.00 0.00 36.97 4.52 R
3103 3341 0.250727 TGCAGGGAGGTACACTTTGC 60.251 55.0 0.00 0.00 34.16 3.68 R
3256 3495 0.438830 GAACATCAGGCGTGTCGTTC 59.561 55.0 19.83 19.83 32.58 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 115 3.508402 TCGCAACACCTCTCAATAGTACA 59.492 43.478 0.00 0.00 0.00 2.90
183 184 0.828022 TCATAGGGGTAAGGTGTGCG 59.172 55.000 0.00 0.00 0.00 5.34
198 199 0.587242 GTGCGTGCATGCGTTCATAG 60.587 55.000 25.05 0.04 37.81 2.23
229 230 5.571741 GTGTATATGCATATGTACGAGCGTT 59.428 40.000 26.21 1.70 34.63 4.84
231 232 3.859745 ATGCATATGTACGAGCGTTTG 57.140 42.857 0.00 0.00 0.00 2.93
343 344 2.159517 GCCATCGAATTGCTCTTTTCGT 60.160 45.455 0.00 0.00 43.81 3.85
358 359 5.045215 TCTTTTCGTCGCTAGAGAAACAAA 58.955 37.500 0.00 0.00 34.14 2.83
374 375 4.534647 AACAAATATACCTGGCCATGGA 57.465 40.909 23.24 11.74 0.00 3.41
378 379 4.510167 AATATACCTGGCCATGGATAGC 57.490 45.455 23.24 0.00 0.00 2.97
386 387 4.704833 CATGGATAGCCCGGCCCG 62.705 72.222 5.55 0.00 37.93 6.13
388 389 4.954118 TGGATAGCCCGGCCCGAT 62.954 66.667 3.71 0.00 37.93 4.18
516 517 2.944094 GCCATTTAAGAAAGAGGCCCGA 60.944 50.000 0.00 0.00 38.72 5.14
626 627 2.642700 CCTGGGGTTTTTGCGTCG 59.357 61.111 0.00 0.00 0.00 5.12
628 629 3.551887 CTGGGGTTTTTGCGTCGGC 62.552 63.158 0.00 0.00 40.52 5.54
661 662 4.547367 CCCGGACCGAGGAATGGC 62.547 72.222 17.49 0.00 0.00 4.40
677 678 4.953579 GGAATGGCCAGGTATAGAAACAAA 59.046 41.667 13.05 0.00 36.34 2.83
1214 1245 2.750166 TCTCTGATTCTGTCGTCTGACC 59.250 50.000 1.55 0.00 44.86 4.02
1230 1261 3.636231 CCTCCTGGCCGTGGTTGA 61.636 66.667 13.43 0.00 0.00 3.18
1235 1266 2.359354 TGGCCGTGGTTGAATCGG 60.359 61.111 0.00 0.00 45.94 4.18
1240 1271 2.452813 CGTGGTTGAATCGGCGGAG 61.453 63.158 7.21 0.00 0.00 4.63
1334 1365 3.725490 GAACCAGTACGAGTTCTTGGTT 58.275 45.455 18.37 15.42 39.42 3.67
1385 1441 3.386402 CCCAGAGGAGAGGTAACTTGATC 59.614 52.174 0.00 0.00 42.35 2.92
1386 1442 4.877760 CCCAGAGGAGAGGTAACTTGATCT 60.878 50.000 0.00 0.00 42.35 2.75
1387 1443 6.341127 CCCAGAGGAGAGGTAACTTGATCTT 61.341 48.000 0.00 0.00 42.35 2.40
1396 1452 5.405331 GGTAACTTGATCTTATTGGCGTC 57.595 43.478 0.00 0.00 0.00 5.19
1397 1453 5.116882 GGTAACTTGATCTTATTGGCGTCT 58.883 41.667 0.00 0.00 0.00 4.18
1400 1456 5.551760 ACTTGATCTTATTGGCGTCTTTG 57.448 39.130 0.00 0.00 0.00 2.77
1402 1458 6.170506 ACTTGATCTTATTGGCGTCTTTGTA 58.829 36.000 0.00 0.00 0.00 2.41
1403 1459 6.653320 ACTTGATCTTATTGGCGTCTTTGTAA 59.347 34.615 0.00 0.00 0.00 2.41
1405 1461 6.170506 TGATCTTATTGGCGTCTTTGTAACT 58.829 36.000 0.00 0.00 0.00 2.24
1406 1462 6.653320 TGATCTTATTGGCGTCTTTGTAACTT 59.347 34.615 0.00 0.00 0.00 2.66
1407 1463 6.236017 TCTTATTGGCGTCTTTGTAACTTG 57.764 37.500 0.00 0.00 0.00 3.16
1408 1464 5.992829 TCTTATTGGCGTCTTTGTAACTTGA 59.007 36.000 0.00 0.00 0.00 3.02
1409 1465 6.653320 TCTTATTGGCGTCTTTGTAACTTGAT 59.347 34.615 0.00 0.00 0.00 2.57
1410 1466 4.742438 TTGGCGTCTTTGTAACTTGATC 57.258 40.909 0.00 0.00 0.00 2.92
1411 1467 4.002906 TGGCGTCTTTGTAACTTGATCT 57.997 40.909 0.00 0.00 0.00 2.75
1412 1468 4.385825 TGGCGTCTTTGTAACTTGATCTT 58.614 39.130 0.00 0.00 0.00 2.40
1413 1469 5.543714 TGGCGTCTTTGTAACTTGATCTTA 58.456 37.500 0.00 0.00 0.00 2.10
1414 1470 6.170506 TGGCGTCTTTGTAACTTGATCTTAT 58.829 36.000 0.00 0.00 0.00 1.73
1415 1471 6.653320 TGGCGTCTTTGTAACTTGATCTTATT 59.347 34.615 0.00 0.00 0.00 1.40
1416 1472 6.961554 GGCGTCTTTGTAACTTGATCTTATTG 59.038 38.462 0.00 0.00 0.00 1.90
1417 1473 6.961554 GCGTCTTTGTAACTTGATCTTATTGG 59.038 38.462 0.00 0.00 0.00 3.16
1418 1474 6.961554 CGTCTTTGTAACTTGATCTTATTGGC 59.038 38.462 0.00 0.00 0.00 4.52
1419 1475 6.961554 GTCTTTGTAACTTGATCTTATTGGCG 59.038 38.462 0.00 0.00 0.00 5.69
1420 1476 6.653320 TCTTTGTAACTTGATCTTATTGGCGT 59.347 34.615 0.00 0.00 0.00 5.68
1421 1477 6.417191 TTGTAACTTGATCTTATTGGCGTC 57.583 37.500 0.00 0.00 0.00 5.19
1424 1480 6.653320 TGTAACTTGATCTTATTGGCGTCTTT 59.347 34.615 0.00 0.00 0.00 2.52
1438 1494 2.767505 CGTCTTTGTTCCTTGTAGCCT 58.232 47.619 0.00 0.00 0.00 4.58
1439 1495 2.480419 CGTCTTTGTTCCTTGTAGCCTG 59.520 50.000 0.00 0.00 0.00 4.85
1440 1496 2.814336 GTCTTTGTTCCTTGTAGCCTGG 59.186 50.000 0.00 0.00 0.00 4.45
1461 1517 5.582689 GGAAATATCCCTGTTTCCACTTG 57.417 43.478 10.99 0.00 46.47 3.16
1464 1520 0.251787 ATCCCTGTTTCCACTTGCCC 60.252 55.000 0.00 0.00 0.00 5.36
1466 1522 1.181098 CCCTGTTTCCACTTGCCCAG 61.181 60.000 0.00 0.00 0.00 4.45
1467 1523 0.468029 CCTGTTTCCACTTGCCCAGT 60.468 55.000 0.00 0.00 35.35 4.00
1468 1524 1.402787 CTGTTTCCACTTGCCCAGTT 58.597 50.000 0.00 0.00 30.92 3.16
1469 1525 1.067516 CTGTTTCCACTTGCCCAGTTG 59.932 52.381 0.00 0.00 30.92 3.16
1470 1526 0.249447 GTTTCCACTTGCCCAGTTGC 60.249 55.000 0.00 0.00 30.92 4.17
1471 1527 1.398958 TTTCCACTTGCCCAGTTGCC 61.399 55.000 0.00 0.00 30.92 4.52
1483 1539 0.535780 CAGTTGCCTGCCACTGAAGA 60.536 55.000 16.03 0.00 32.38 2.87
1484 1540 0.536006 AGTTGCCTGCCACTGAAGAC 60.536 55.000 0.00 0.00 0.00 3.01
1500 1556 4.582869 TGAAGACAGTGCTTATGCTGAAT 58.417 39.130 1.96 0.00 40.48 2.57
1501 1557 4.633126 TGAAGACAGTGCTTATGCTGAATC 59.367 41.667 1.96 0.00 40.48 2.52
1502 1558 4.212143 AGACAGTGCTTATGCTGAATCA 57.788 40.909 1.96 0.00 40.48 2.57
1504 1560 5.922053 AGACAGTGCTTATGCTGAATCATA 58.078 37.500 1.96 0.00 40.48 2.15
1505 1561 6.531923 AGACAGTGCTTATGCTGAATCATAT 58.468 36.000 1.96 0.00 40.48 1.78
1506 1562 6.427242 AGACAGTGCTTATGCTGAATCATATG 59.573 38.462 0.00 0.00 40.48 1.78
1507 1563 6.293698 ACAGTGCTTATGCTGAATCATATGA 58.706 36.000 8.10 8.10 40.48 2.15
1508 1564 6.769341 ACAGTGCTTATGCTGAATCATATGAA 59.231 34.615 9.99 0.00 40.48 2.57
1509 1565 7.076362 CAGTGCTTATGCTGAATCATATGAAC 58.924 38.462 9.99 7.81 40.48 3.18
1510 1566 6.996879 AGTGCTTATGCTGAATCATATGAACT 59.003 34.615 9.99 0.00 37.77 3.01
1511 1567 7.501559 AGTGCTTATGCTGAATCATATGAACTT 59.498 33.333 9.99 0.00 38.67 2.66
1512 1568 7.802251 GTGCTTATGCTGAATCATATGAACTTC 59.198 37.037 9.99 10.48 40.48 3.01
1513 1569 7.040892 TGCTTATGCTGAATCATATGAACTTCC 60.041 37.037 9.99 0.00 40.48 3.46
1514 1570 7.174599 GCTTATGCTGAATCATATGAACTTCCT 59.825 37.037 9.99 0.00 36.03 3.36
1515 1571 9.716531 CTTATGCTGAATCATATGAACTTCCTA 57.283 33.333 9.99 0.51 0.00 2.94
1517 1573 8.789825 ATGCTGAATCATATGAACTTCCTATC 57.210 34.615 9.99 1.11 0.00 2.08
1556 1612 5.757850 ATGCTTACTTGTTGCCTAATAGC 57.242 39.130 0.00 0.00 0.00 2.97
1568 1638 3.802139 TGCCTAATAGCTTGAAACGATCG 59.198 43.478 14.88 14.88 0.00 3.69
1575 1645 9.188588 CTAATAGCTTGAAACGATCGGTATTTA 57.811 33.333 20.98 5.56 0.00 1.40
1578 1648 7.316544 AGCTTGAAACGATCGGTATTTAAAT 57.683 32.000 20.98 5.89 0.00 1.40
1579 1649 7.758495 AGCTTGAAACGATCGGTATTTAAATT 58.242 30.769 20.98 0.00 0.00 1.82
1661 1753 5.809001 TGTAGAATTGTGGAAATCAGCTCT 58.191 37.500 0.00 0.00 0.00 4.09
1670 1762 7.288810 TGTGGAAATCAGCTCTTGTTTATTT 57.711 32.000 0.00 0.00 0.00 1.40
1671 1763 8.402798 TGTGGAAATCAGCTCTTGTTTATTTA 57.597 30.769 0.00 0.00 0.00 1.40
1672 1764 8.296713 TGTGGAAATCAGCTCTTGTTTATTTAC 58.703 33.333 0.00 0.00 0.00 2.01
1673 1765 8.296713 GTGGAAATCAGCTCTTGTTTATTTACA 58.703 33.333 0.00 0.00 0.00 2.41
1674 1766 8.855110 TGGAAATCAGCTCTTGTTTATTTACAA 58.145 29.630 0.00 0.00 36.63 2.41
1693 1785 8.472007 TTTACAAATAGATGACCCAACTTTGT 57.528 30.769 0.00 0.00 0.00 2.83
1694 1786 9.575868 TTTACAAATAGATGACCCAACTTTGTA 57.424 29.630 0.00 0.00 0.00 2.41
1695 1787 7.448748 ACAAATAGATGACCCAACTTTGTAC 57.551 36.000 0.00 0.00 0.00 2.90
1696 1788 7.231467 ACAAATAGATGACCCAACTTTGTACT 58.769 34.615 0.00 0.00 0.00 2.73
1697 1789 8.380099 ACAAATAGATGACCCAACTTTGTACTA 58.620 33.333 0.00 0.00 0.00 1.82
1698 1790 9.226606 CAAATAGATGACCCAACTTTGTACTAA 57.773 33.333 0.00 0.00 0.00 2.24
1699 1791 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
1700 1792 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
1701 1793 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
1703 1795 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
1704 1796 8.617290 ATGACCCAACTTTGTACTAAAGTTAG 57.383 34.615 23.56 20.79 45.57 2.34
1705 1797 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
1706 1798 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
1707 1799 9.716531 GACCCAACTTTGTACTAAAGTTAGTAT 57.283 33.333 23.56 15.20 45.57 2.12
1733 1825 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
1734 1826 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
1735 1827 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1736 1828 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1737 1829 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1738 1830 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1739 1831 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1740 1832 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
1750 1842 3.522553 GAACGGAGGGAGTACATTTCAG 58.477 50.000 0.00 0.00 0.00 3.02
1751 1843 1.831736 ACGGAGGGAGTACATTTCAGG 59.168 52.381 0.00 0.00 0.00 3.86
1755 1847 3.263425 GGAGGGAGTACATTTCAGGTCAA 59.737 47.826 0.00 0.00 0.00 3.18
1777 1869 2.096496 CCTTCTGCAGAACCATTAAGCG 59.904 50.000 25.16 11.77 0.00 4.68
1788 1880 7.526608 CAGAACCATTAAGCGTTTCTTGATAA 58.473 34.615 0.00 0.00 36.25 1.75
1794 1886 7.754924 CCATTAAGCGTTTCTTGATAACAACAT 59.245 33.333 0.00 0.00 36.25 2.71
1796 1888 5.296813 AGCGTTTCTTGATAACAACATCC 57.703 39.130 0.00 0.00 32.27 3.51
1802 1894 8.592998 CGTTTCTTGATAACAACATCCTACTAC 58.407 37.037 0.00 0.00 32.27 2.73
1803 1895 9.654663 GTTTCTTGATAACAACATCCTACTACT 57.345 33.333 0.00 0.00 32.27 2.57
1834 1937 7.661040 TCTCATTGGATTTTTCTGTTCTTTCC 58.339 34.615 0.00 0.00 0.00 3.13
1852 1955 1.294068 TCCCCCTAGTTATCAGGCAGT 59.706 52.381 0.00 0.00 0.00 4.40
1853 1956 1.417890 CCCCCTAGTTATCAGGCAGTG 59.582 57.143 0.00 0.00 0.00 3.66
1860 1963 1.135575 GTTATCAGGCAGTGCTGTTGC 60.136 52.381 16.11 0.00 40.80 4.17
1883 1987 2.102420 TGATAATGCAGGGGACTACGTG 59.898 50.000 0.00 0.00 40.21 4.49
1912 2016 4.789095 TTTACTGCTTTGTTCGTCTGTC 57.211 40.909 0.00 0.00 0.00 3.51
1919 2023 4.033587 TGCTTTGTTCGTCTGTCAGTTAAC 59.966 41.667 0.00 0.00 0.00 2.01
1925 2029 3.381045 TCGTCTGTCAGTTAACTGCTTG 58.619 45.455 27.49 18.86 43.46 4.01
1929 2033 1.603802 TGTCAGTTAACTGCTTGCTGC 59.396 47.619 27.49 12.75 43.46 5.25
1944 2048 3.819564 TGCTGCATCTACCGTTTATCT 57.180 42.857 0.00 0.00 0.00 1.98
1948 2052 4.151335 GCTGCATCTACCGTTTATCTGATG 59.849 45.833 0.00 0.00 35.69 3.07
1952 2056 5.753438 GCATCTACCGTTTATCTGATGTGAA 59.247 40.000 0.00 0.00 35.22 3.18
2081 2191 2.159338 CCGACAGGGAATTGCATTTGAG 60.159 50.000 0.00 0.00 38.47 3.02
2232 2343 3.389329 GGAACCCAGAGATGAGCTTCATA 59.611 47.826 0.00 0.00 37.20 2.15
2235 2346 5.643421 ACCCAGAGATGAGCTTCATATTT 57.357 39.130 0.00 0.00 37.20 1.40
2240 2351 6.147492 CCAGAGATGAGCTTCATATTTAGTGC 59.853 42.308 0.00 0.00 37.20 4.40
2257 2376 3.321497 AGTGCGAGTCAGTCAAAAGATC 58.679 45.455 0.00 0.00 0.00 2.75
2258 2377 3.059884 GTGCGAGTCAGTCAAAAGATCA 58.940 45.455 0.00 0.00 0.00 2.92
2259 2378 3.059884 TGCGAGTCAGTCAAAAGATCAC 58.940 45.455 0.00 0.00 0.00 3.06
2260 2379 3.059884 GCGAGTCAGTCAAAAGATCACA 58.940 45.455 0.00 0.00 0.00 3.58
2261 2380 3.120854 GCGAGTCAGTCAAAAGATCACAC 60.121 47.826 0.00 0.00 0.00 3.82
2262 2381 4.051237 CGAGTCAGTCAAAAGATCACACA 58.949 43.478 0.00 0.00 0.00 3.72
2263 2382 4.084849 CGAGTCAGTCAAAAGATCACACAC 60.085 45.833 0.00 0.00 0.00 3.82
2264 2383 5.028549 AGTCAGTCAAAAGATCACACACT 57.971 39.130 0.00 0.00 0.00 3.55
2265 2384 4.813161 AGTCAGTCAAAAGATCACACACTG 59.187 41.667 0.00 0.68 0.00 3.66
2266 2385 4.811024 GTCAGTCAAAAGATCACACACTGA 59.189 41.667 9.30 9.30 37.14 3.41
2267 2386 5.294306 GTCAGTCAAAAGATCACACACTGAA 59.706 40.000 13.12 0.85 40.22 3.02
2268 2387 6.017605 GTCAGTCAAAAGATCACACACTGAAT 60.018 38.462 13.12 0.00 40.22 2.57
2296 2415 1.628846 GCACTGAAAGGTTCCCCTAGA 59.371 52.381 0.00 0.00 41.56 2.43
2299 2418 2.846827 ACTGAAAGGTTCCCCTAGATGG 59.153 50.000 0.00 0.00 41.56 3.51
2311 2430 2.422093 CCCTAGATGGCTCCTTCCAAAC 60.422 54.545 0.00 0.00 39.96 2.93
2347 2466 6.039717 ACCAAAATGATCATCTGGGTTTATCG 59.960 38.462 27.98 12.12 0.00 2.92
2434 2564 3.003480 GCAGTTCCCAGTCAAGACATAC 58.997 50.000 2.72 0.00 0.00 2.39
2435 2565 3.307059 GCAGTTCCCAGTCAAGACATACT 60.307 47.826 2.72 0.00 0.00 2.12
2436 2566 4.081642 GCAGTTCCCAGTCAAGACATACTA 60.082 45.833 2.72 0.00 0.00 1.82
2480 2685 7.876936 AATGAGTAGTTACTAGGTCGAATGA 57.123 36.000 0.00 0.00 36.50 2.57
2513 2718 4.582656 CACCATTTCCTGTTTGAACACCTA 59.417 41.667 0.00 0.00 34.70 3.08
2555 2761 9.261318 GCTTCTAACACAAAAATGTTTGAAAAC 57.739 29.630 15.43 0.00 46.37 2.43
2588 2796 2.290641 CCTGTTGTTCTGTGCCACTTAC 59.709 50.000 0.00 0.00 0.00 2.34
2598 2806 0.403655 TGCCACTTACTTGCCCATCA 59.596 50.000 0.00 0.00 0.00 3.07
2625 2833 2.104170 TGAACCTTTTTGGGTGTGGTC 58.896 47.619 0.00 0.00 39.85 4.02
2682 2900 9.233649 TCCACGTTTTATACCTTTGTCATAATT 57.766 29.630 0.00 0.00 0.00 1.40
2725 2944 5.025826 GGAAATTAATAGCAACACGAACCG 58.974 41.667 0.00 0.00 0.00 4.44
2739 2961 1.486439 GAACCGTCGACGTTACCAAA 58.514 50.000 33.49 0.00 37.74 3.28
2810 3032 6.422333 ACACTATCACTCTCTCTGATTCTCA 58.578 40.000 0.00 0.00 30.76 3.27
2842 3064 1.605753 CCCTGATAGGACGACATCGA 58.394 55.000 8.54 0.00 38.66 3.59
2908 3130 2.099431 GCAGCAAGCTCTGGAGACG 61.099 63.158 4.72 0.00 41.15 4.18
3103 3341 3.837213 AATGAGATGACAAGGCAAACG 57.163 42.857 0.00 0.00 0.00 3.60
3124 3362 2.154462 CAAAGTGTACCTCCCTGCAAG 58.846 52.381 0.00 0.00 0.00 4.01
3160 3398 0.669318 CAGCCGAGTAACCGCTCAAA 60.669 55.000 0.00 0.00 35.33 2.69
3168 3406 3.062042 AGTAACCGCTCAAACTTAACCG 58.938 45.455 0.00 0.00 0.00 4.44
3194 3433 2.004583 TAACGATTTCAGCTCCCGTG 57.995 50.000 0.00 0.00 33.48 4.94
3200 3439 1.344065 TTTCAGCTCCCGTGTTCCTA 58.656 50.000 0.00 0.00 0.00 2.94
3216 3455 6.365520 GTGTTCCTAATAGGATTCCCATGTT 58.634 40.000 10.21 0.00 45.34 2.71
3230 3469 3.447918 CCATGTTCAATGGGATCAAGC 57.552 47.619 0.00 0.00 35.58 4.01
3233 3472 4.646040 CCATGTTCAATGGGATCAAGCTTA 59.354 41.667 0.00 0.00 35.58 3.09
3275 3514 0.438830 GAACGACACGCCTGATGTTC 59.561 55.000 0.00 8.20 32.20 3.18
3285 3524 1.602311 CCTGATGTTCTATGGGCAGC 58.398 55.000 0.00 0.00 0.00 5.25
3286 3525 1.134007 CCTGATGTTCTATGGGCAGCA 60.134 52.381 0.00 0.00 0.00 4.41
3292 3531 2.162681 GTTCTATGGGCAGCAACACTT 58.837 47.619 0.00 0.00 0.00 3.16
3339 3578 9.995003 TTGATAAATTGCTTACTTGAAATGGTT 57.005 25.926 0.00 0.00 0.00 3.67
3389 3628 1.340017 TGAGGGCACAAGTTCCTATGC 60.340 52.381 0.00 0.00 37.35 3.14
3434 3673 6.015434 TCGTGCTATTCTATCCAATGCTCTTA 60.015 38.462 0.00 0.00 0.00 2.10
3465 3704 2.300956 TGGCATTTCAACCCAGCTTA 57.699 45.000 0.00 0.00 0.00 3.09
3478 3717 7.610865 TCAACCCAGCTTATTAATTTTCCTTG 58.389 34.615 0.00 0.00 0.00 3.61
3539 3778 2.136298 TTCAACTGTGGTTTCTGCCA 57.864 45.000 0.00 0.00 35.93 4.92
3560 3799 2.497273 AGAAATTGCTTTTGGATCCCGG 59.503 45.455 9.90 0.00 0.00 5.73
3584 3823 1.483415 CCATGGAGCCTGGATTTTTGG 59.517 52.381 5.56 0.00 35.70 3.28
3586 3825 2.220653 TGGAGCCTGGATTTTTGGAG 57.779 50.000 0.00 0.00 0.00 3.86
3657 3896 2.969821 TTTGCACATGAACCTAGGGT 57.030 45.000 14.81 6.29 37.65 4.34
3673 3912 7.169287 ACCTAGGGTTGTATTCTAGATCTCT 57.831 40.000 14.81 0.00 34.09 3.10
3674 3913 7.007723 ACCTAGGGTTGTATTCTAGATCTCTG 58.992 42.308 14.81 0.00 34.09 3.35
3680 3919 9.699703 GGGTTGTATTCTAGATCTCTGTAAATC 57.300 37.037 0.00 0.00 0.00 2.17
3970 4212 3.145286 GTTTCTGCTGGCTTCTTCTCTT 58.855 45.455 0.00 0.00 0.00 2.85
3973 4215 2.570752 TCTGCTGGCTTCTTCTCTTGAT 59.429 45.455 0.00 0.00 0.00 2.57
3977 4219 4.586001 TGCTGGCTTCTTCTCTTGATTTTT 59.414 37.500 0.00 0.00 0.00 1.94
3978 4220 5.769662 TGCTGGCTTCTTCTCTTGATTTTTA 59.230 36.000 0.00 0.00 0.00 1.52
3979 4221 6.435277 TGCTGGCTTCTTCTCTTGATTTTTAT 59.565 34.615 0.00 0.00 0.00 1.40
4002 4244 9.577110 TTATAGAAGTAAACCTACATGTTCGTG 57.423 33.333 2.30 0.00 0.00 4.35
4003 4245 5.235516 AGAAGTAAACCTACATGTTCGTGG 58.764 41.667 2.30 4.52 0.00 4.94
4007 4249 2.922740 ACCTACATGTTCGTGGTGTT 57.077 45.000 2.30 0.00 0.00 3.32
4018 4260 4.035091 TGTTCGTGGTGTTGAGAGAATTTG 59.965 41.667 0.00 0.00 0.00 2.32
4021 4263 2.622942 GTGGTGTTGAGAGAATTTGCCA 59.377 45.455 0.00 0.00 0.00 4.92
4077 4325 4.682021 AGGATTTCTGGAAGGGAACATT 57.318 40.909 0.00 0.00 0.00 2.71
4078 4326 5.796502 AGGATTTCTGGAAGGGAACATTA 57.203 39.130 0.00 0.00 0.00 1.90
4079 4327 6.152638 AGGATTTCTGGAAGGGAACATTAA 57.847 37.500 0.00 0.00 0.00 1.40
4080 4328 6.561294 AGGATTTCTGGAAGGGAACATTAAA 58.439 36.000 0.00 0.00 0.00 1.52
4081 4329 6.437477 AGGATTTCTGGAAGGGAACATTAAAC 59.563 38.462 0.00 0.00 0.00 2.01
4082 4330 6.351033 GGATTTCTGGAAGGGAACATTAAACC 60.351 42.308 0.00 0.00 0.00 3.27
4083 4331 4.042271 TCTGGAAGGGAACATTAAACCC 57.958 45.455 0.00 0.00 43.55 4.11
4091 4339 5.050644 GGGAACATTAAACCCGTTAAGTG 57.949 43.478 0.00 0.00 35.16 3.16
4092 4340 4.520111 GGGAACATTAAACCCGTTAAGTGT 59.480 41.667 0.00 0.00 35.16 3.55
4093 4341 5.335113 GGGAACATTAAACCCGTTAAGTGTC 60.335 44.000 0.00 0.00 35.16 3.67
4094 4342 4.996062 ACATTAAACCCGTTAAGTGTCG 57.004 40.909 0.00 0.00 35.16 4.35
4095 4343 3.747529 ACATTAAACCCGTTAAGTGTCGG 59.252 43.478 0.00 0.00 45.42 4.79
4101 4349 1.706443 CCGTTAAGTGTCGGGAGAAC 58.294 55.000 0.00 0.00 42.89 3.01
4102 4350 1.334054 CGTTAAGTGTCGGGAGAACG 58.666 55.000 0.00 0.00 42.89 3.95
4103 4351 1.706443 GTTAAGTGTCGGGAGAACGG 58.294 55.000 0.00 0.00 42.89 4.44
4104 4352 0.037975 TTAAGTGTCGGGAGAACGGC 60.038 55.000 0.00 0.00 42.89 5.68
4105 4353 2.203972 TAAGTGTCGGGAGAACGGCG 62.204 60.000 4.80 4.80 42.29 6.46
4124 4372 4.582760 GCAACCATGTGCCATGTG 57.417 55.556 12.36 7.53 38.66 3.21
4125 4373 1.079681 GCAACCATGTGCCATGTGG 60.080 57.895 12.36 0.00 38.66 4.17
4135 4383 2.259204 CCATGTGGCGCAAACTGG 59.741 61.111 10.83 12.20 0.00 4.00
4136 4384 2.563798 CCATGTGGCGCAAACTGGT 61.564 57.895 10.83 0.00 0.00 4.00
4137 4385 1.363443 CATGTGGCGCAAACTGGTT 59.637 52.632 10.83 0.00 0.00 3.67
4138 4386 0.940519 CATGTGGCGCAAACTGGTTG 60.941 55.000 10.83 0.00 40.50 3.77
4139 4387 2.027460 GTGGCGCAAACTGGTTGG 59.973 61.111 10.83 0.00 37.73 3.77
4140 4388 3.910490 TGGCGCAAACTGGTTGGC 61.910 61.111 10.83 8.74 37.73 4.52
4141 4389 4.662961 GGCGCAAACTGGTTGGCC 62.663 66.667 17.94 17.94 42.54 5.36
4142 4390 4.999939 GCGCAAACTGGTTGGCCG 63.000 66.667 7.65 4.40 36.15 6.13
4143 4391 4.999939 CGCAAACTGGTTGGCCGC 63.000 66.667 7.65 0.00 36.15 6.53
4144 4392 4.999939 GCAAACTGGTTGGCCGCG 63.000 66.667 7.65 0.00 37.73 6.46
4145 4393 4.341502 CAAACTGGTTGGCCGCGG 62.342 66.667 24.05 24.05 37.67 6.46
4146 4394 4.887190 AAACTGGTTGGCCGCGGT 62.887 61.111 28.70 0.00 37.67 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 115 4.702131 GTGTTCTTCAATTGTAGGCCATCT 59.298 41.667 5.01 0.00 0.00 2.90
183 184 4.201851 ACTCATTTCTATGAACGCATGCAC 60.202 41.667 19.57 8.95 40.17 4.57
198 199 9.353999 TCGTACATATGCATATACACTCATTTC 57.646 33.333 18.70 1.45 0.00 2.17
229 230 7.011202 TGTCTTTTTAACACAGTACATACGCAA 59.989 33.333 0.00 0.00 0.00 4.85
231 232 6.879962 TGTCTTTTTAACACAGTACATACGC 58.120 36.000 0.00 0.00 0.00 4.42
343 344 6.513180 CCAGGTATATTTGTTTCTCTAGCGA 58.487 40.000 0.00 0.00 0.00 4.93
386 387 4.851179 GGTCGGGTTGGGCCGATC 62.851 72.222 0.00 0.00 40.54 3.69
440 441 0.322187 TTCGGGCTCAAAACCTAGGC 60.322 55.000 9.30 0.00 37.55 3.93
474 475 4.779733 ATCGACGGGCCCAGACCT 62.780 66.667 24.92 0.00 0.00 3.85
533 534 2.223249 CCATCACATTAAAAGCCCGTCG 60.223 50.000 0.00 0.00 0.00 5.12
607 608 2.123468 ACGCAAAAACCCCAGGCT 60.123 55.556 0.00 0.00 0.00 4.58
615 616 1.212455 CCAAAGGCCGACGCAAAAAC 61.212 55.000 0.00 0.00 36.38 2.43
651 652 2.248248 TCTATACCTGGCCATTCCTCG 58.752 52.381 5.51 0.00 35.26 4.63
661 662 5.074115 TGGGTTGTTTGTTTCTATACCTGG 58.926 41.667 0.00 0.00 0.00 4.45
677 678 2.489275 CGCTGCTGGTTTGGGTTGT 61.489 57.895 0.00 0.00 0.00 3.32
988 1014 1.975363 GACTGCATCGTTCCTGCTGC 61.975 60.000 0.00 0.00 40.87 5.25
990 1016 1.446792 CGACTGCATCGTTCCTGCT 60.447 57.895 9.48 0.00 46.25 4.24
1202 1233 1.886585 CCAGGAGGTCAGACGACAG 59.113 63.158 0.00 0.00 44.54 3.51
1214 1245 1.002134 ATTCAACCACGGCCAGGAG 60.002 57.895 17.66 9.57 0.00 3.69
1230 1261 1.906105 TAAACCCTGCTCCGCCGATT 61.906 55.000 0.00 0.00 0.00 3.34
1235 1266 0.815615 CCTCATAAACCCTGCTCCGC 60.816 60.000 0.00 0.00 0.00 5.54
1240 1271 1.473434 CCTCGTCCTCATAAACCCTGC 60.473 57.143 0.00 0.00 0.00 4.85
1289 1320 1.183030 TCGCGTCCTCCTTCTTGGAA 61.183 55.000 5.77 0.00 45.63 3.53
1385 1441 6.236017 TCAAGTTACAAAGACGCCAATAAG 57.764 37.500 0.00 0.00 0.00 1.73
1386 1442 6.653320 AGATCAAGTTACAAAGACGCCAATAA 59.347 34.615 0.00 0.00 0.00 1.40
1387 1443 6.170506 AGATCAAGTTACAAAGACGCCAATA 58.829 36.000 0.00 0.00 0.00 1.90
1395 1451 6.653320 ACGCCAATAAGATCAAGTTACAAAGA 59.347 34.615 0.00 0.00 0.00 2.52
1396 1452 6.842163 ACGCCAATAAGATCAAGTTACAAAG 58.158 36.000 0.00 0.00 0.00 2.77
1397 1453 6.653320 AGACGCCAATAAGATCAAGTTACAAA 59.347 34.615 0.00 0.00 0.00 2.83
1400 1456 6.663944 AAGACGCCAATAAGATCAAGTTAC 57.336 37.500 0.00 0.00 0.00 2.50
1402 1458 5.473504 ACAAAGACGCCAATAAGATCAAGTT 59.526 36.000 0.00 0.00 0.00 2.66
1403 1459 5.003804 ACAAAGACGCCAATAAGATCAAGT 58.996 37.500 0.00 0.00 0.00 3.16
1405 1461 5.106317 GGAACAAAGACGCCAATAAGATCAA 60.106 40.000 0.00 0.00 0.00 2.57
1406 1462 4.394920 GGAACAAAGACGCCAATAAGATCA 59.605 41.667 0.00 0.00 0.00 2.92
1407 1463 4.636206 AGGAACAAAGACGCCAATAAGATC 59.364 41.667 0.00 0.00 0.00 2.75
1408 1464 4.589908 AGGAACAAAGACGCCAATAAGAT 58.410 39.130 0.00 0.00 0.00 2.40
1409 1465 4.015872 AGGAACAAAGACGCCAATAAGA 57.984 40.909 0.00 0.00 0.00 2.10
1410 1466 4.023193 ACAAGGAACAAAGACGCCAATAAG 60.023 41.667 0.00 0.00 0.00 1.73
1411 1467 3.886505 ACAAGGAACAAAGACGCCAATAA 59.113 39.130 0.00 0.00 0.00 1.40
1412 1468 3.482436 ACAAGGAACAAAGACGCCAATA 58.518 40.909 0.00 0.00 0.00 1.90
1413 1469 2.306847 ACAAGGAACAAAGACGCCAAT 58.693 42.857 0.00 0.00 0.00 3.16
1414 1470 1.757682 ACAAGGAACAAAGACGCCAA 58.242 45.000 0.00 0.00 0.00 4.52
1415 1471 2.489971 CTACAAGGAACAAAGACGCCA 58.510 47.619 0.00 0.00 0.00 5.69
1416 1472 1.197036 GCTACAAGGAACAAAGACGCC 59.803 52.381 0.00 0.00 0.00 5.68
1417 1473 1.197036 GGCTACAAGGAACAAAGACGC 59.803 52.381 0.00 0.00 0.00 5.19
1418 1474 2.480419 CAGGCTACAAGGAACAAAGACG 59.520 50.000 0.00 0.00 0.00 4.18
1419 1475 2.814336 CCAGGCTACAAGGAACAAAGAC 59.186 50.000 0.00 0.00 0.00 3.01
1420 1476 2.708861 TCCAGGCTACAAGGAACAAAGA 59.291 45.455 0.00 0.00 0.00 2.52
1421 1477 3.140325 TCCAGGCTACAAGGAACAAAG 57.860 47.619 0.00 0.00 0.00 2.77
1424 1480 3.806949 ATTTCCAGGCTACAAGGAACA 57.193 42.857 3.68 0.00 40.88 3.18
1439 1495 4.142160 GCAAGTGGAAACAGGGATATTTCC 60.142 45.833 8.50 8.50 44.46 3.13
1440 1496 4.142160 GGCAAGTGGAAACAGGGATATTTC 60.142 45.833 0.00 0.00 44.46 2.17
1466 1522 0.819259 TGTCTTCAGTGGCAGGCAAC 60.819 55.000 0.00 0.00 0.00 4.17
1467 1523 0.535780 CTGTCTTCAGTGGCAGGCAA 60.536 55.000 0.00 0.00 36.97 4.52
1468 1524 1.071987 CTGTCTTCAGTGGCAGGCA 59.928 57.895 0.00 0.00 36.97 4.75
1469 1525 3.978272 CTGTCTTCAGTGGCAGGC 58.022 61.111 0.00 0.00 36.97 4.85
1477 1533 3.593096 TCAGCATAAGCACTGTCTTCAG 58.407 45.455 0.00 0.00 45.49 3.02
1483 1539 6.293698 TCATATGATTCAGCATAAGCACTGT 58.706 36.000 0.00 0.00 45.49 3.55
1484 1540 6.796705 TCATATGATTCAGCATAAGCACTG 57.203 37.500 0.00 0.00 45.49 3.66
1521 1577 8.819974 CAACAAGTAAGCATTTCAACTCAAAAT 58.180 29.630 0.00 0.00 0.00 1.82
1530 1586 6.588719 ATTAGGCAACAAGTAAGCATTTCA 57.411 33.333 0.00 0.00 41.41 2.69
1556 1612 9.210426 CAGAATTTAAATACCGATCGTTTCAAG 57.790 33.333 15.09 0.00 0.00 3.02
1579 1649 9.784531 AGAATGAACTTCTAAGTCAATTTCAGA 57.215 29.630 0.00 0.00 42.56 3.27
1631 1701 4.846779 TTCCACAATTCTACAAACTGCC 57.153 40.909 0.00 0.00 0.00 4.85
1670 1762 8.380099 AGTACAAAGTTGGGTCATCTATTTGTA 58.620 33.333 0.00 0.00 33.06 2.41
1671 1763 7.231467 AGTACAAAGTTGGGTCATCTATTTGT 58.769 34.615 0.00 5.80 34.88 2.83
1672 1764 7.687941 AGTACAAAGTTGGGTCATCTATTTG 57.312 36.000 0.00 0.00 0.00 2.32
1673 1765 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
1674 1766 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
1676 1768 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
1677 1769 6.838382 ACTTTAGTACAAAGTTGGGTCATCT 58.162 36.000 14.04 0.00 37.18 2.90
1678 1770 7.506328 AACTTTAGTACAAAGTTGGGTCATC 57.494 36.000 23.48 0.00 45.58 2.92
1679 1771 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
1680 1772 7.567458 ACTAACTTTAGTACAAAGTTGGGTCA 58.433 34.615 28.62 17.50 46.38 4.02
1681 1773 9.716531 ATACTAACTTTAGTACAAAGTTGGGTC 57.283 33.333 28.62 0.00 46.38 4.46
1707 1799 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
1708 1800 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
1709 1801 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
1710 1802 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
1711 1803 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
1712 1804 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1713 1805 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1714 1806 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1715 1807 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1716 1808 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1717 1809 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1718 1810 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1719 1811 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1720 1812 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1721 1813 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1722 1814 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
1723 1815 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
1724 1816 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
1725 1817 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
1726 1818 1.946984 ATGTACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
1727 1819 1.946984 AATGTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
1728 1820 2.235402 TGAAATGTACTCCCTCCGTTCC 59.765 50.000 0.00 0.00 0.00 3.62
1729 1821 3.522553 CTGAAATGTACTCCCTCCGTTC 58.477 50.000 0.00 0.00 0.00 3.95
1730 1822 2.236395 CCTGAAATGTACTCCCTCCGTT 59.764 50.000 0.00 0.00 0.00 4.44
1731 1823 1.831736 CCTGAAATGTACTCCCTCCGT 59.168 52.381 0.00 0.00 0.00 4.69
1732 1824 1.831736 ACCTGAAATGTACTCCCTCCG 59.168 52.381 0.00 0.00 0.00 4.63
1733 1825 2.838202 TGACCTGAAATGTACTCCCTCC 59.162 50.000 0.00 0.00 0.00 4.30
1734 1826 4.254492 GTTGACCTGAAATGTACTCCCTC 58.746 47.826 0.00 0.00 0.00 4.30
1735 1827 3.009143 GGTTGACCTGAAATGTACTCCCT 59.991 47.826 0.00 0.00 0.00 4.20
1736 1828 3.009143 AGGTTGACCTGAAATGTACTCCC 59.991 47.826 0.97 0.00 46.55 4.30
1737 1829 4.287766 AGGTTGACCTGAAATGTACTCC 57.712 45.455 0.97 0.00 46.55 3.85
1750 1842 1.239347 GGTTCTGCAGAAGGTTGACC 58.761 55.000 29.13 21.63 34.27 4.02
1751 1843 1.967319 TGGTTCTGCAGAAGGTTGAC 58.033 50.000 29.13 16.69 34.27 3.18
1755 1847 3.084786 GCTTAATGGTTCTGCAGAAGGT 58.915 45.455 29.13 14.93 34.27 3.50
1777 1869 9.654663 AGTAGTAGGATGTTGTTATCAAGAAAC 57.345 33.333 0.00 0.00 33.97 2.78
1788 1880 8.362464 TGAGAACAATAGTAGTAGGATGTTGT 57.638 34.615 9.62 6.87 31.68 3.32
1794 1886 8.783660 ATCCAATGAGAACAATAGTAGTAGGA 57.216 34.615 0.00 0.00 0.00 2.94
1802 1894 9.918630 AACAGAAAAATCCAATGAGAACAATAG 57.081 29.630 0.00 0.00 0.00 1.73
1803 1895 9.912634 GAACAGAAAAATCCAATGAGAACAATA 57.087 29.630 0.00 0.00 0.00 1.90
1804 1896 8.645110 AGAACAGAAAAATCCAATGAGAACAAT 58.355 29.630 0.00 0.00 0.00 2.71
1805 1897 8.010733 AGAACAGAAAAATCCAATGAGAACAA 57.989 30.769 0.00 0.00 0.00 2.83
1806 1898 7.587037 AGAACAGAAAAATCCAATGAGAACA 57.413 32.000 0.00 0.00 0.00 3.18
1807 1899 8.877808 AAAGAACAGAAAAATCCAATGAGAAC 57.122 30.769 0.00 0.00 0.00 3.01
1808 1900 8.143835 GGAAAGAACAGAAAAATCCAATGAGAA 58.856 33.333 0.00 0.00 0.00 2.87
1809 1901 7.255942 GGGAAAGAACAGAAAAATCCAATGAGA 60.256 37.037 0.00 0.00 0.00 3.27
1810 1902 6.870439 GGGAAAGAACAGAAAAATCCAATGAG 59.130 38.462 0.00 0.00 0.00 2.90
1834 1937 1.202698 GCACTGCCTGATAACTAGGGG 60.203 57.143 0.00 0.00 35.80 4.79
1852 1955 1.746787 CTGCATTATCAGGCAACAGCA 59.253 47.619 0.00 0.00 39.93 4.41
1853 1956 1.066605 CCTGCATTATCAGGCAACAGC 59.933 52.381 0.00 0.00 46.11 4.40
1860 1963 4.819759 ACGTAGTCCCCTGCATTATCAGG 61.820 52.174 2.93 2.93 46.15 3.86
1861 1964 2.365617 ACGTAGTCCCCTGCATTATCAG 59.634 50.000 0.00 0.00 29.74 2.90
1864 1967 1.202651 GCACGTAGTCCCCTGCATTAT 60.203 52.381 0.00 0.00 41.61 1.28
1884 1988 5.931532 ACGAACAAAGCAGTAAATCATCTG 58.068 37.500 0.00 0.00 35.12 2.90
1900 2004 3.554324 GCAGTTAACTGACAGACGAACAA 59.446 43.478 34.43 0.00 46.59 2.83
1925 2029 3.717707 TCAGATAAACGGTAGATGCAGC 58.282 45.455 0.00 0.00 0.00 5.25
1929 2033 7.095481 CCATTCACATCAGATAAACGGTAGATG 60.095 40.741 0.00 0.00 38.92 2.90
1932 2036 6.280643 TCCATTCACATCAGATAAACGGTAG 58.719 40.000 0.00 0.00 0.00 3.18
1933 2037 6.228616 TCCATTCACATCAGATAAACGGTA 57.771 37.500 0.00 0.00 0.00 4.02
1935 2039 6.624352 AATCCATTCACATCAGATAAACGG 57.376 37.500 0.00 0.00 0.00 4.44
1944 2048 9.685276 AAGTGTAATTCTAATCCATTCACATCA 57.315 29.630 0.00 0.00 0.00 3.07
1948 2052 8.281212 ACCAAGTGTAATTCTAATCCATTCAC 57.719 34.615 0.00 0.00 0.00 3.18
1952 2056 9.920946 ACATAACCAAGTGTAATTCTAATCCAT 57.079 29.630 0.00 0.00 0.00 3.41
2036 2146 0.689080 TTTCCAGCACCCTTTGGCAA 60.689 50.000 0.00 0.00 34.38 4.52
2081 2191 1.634702 TTGTTGCTTTCGTGGTTTGC 58.365 45.000 0.00 0.00 0.00 3.68
2106 2216 9.057911 AGACTCTACTCCTAGCTCTCAATATAT 57.942 37.037 0.00 0.00 0.00 0.86
2107 2217 8.318412 CAGACTCTACTCCTAGCTCTCAATATA 58.682 40.741 0.00 0.00 0.00 0.86
2124 2234 8.232913 ACATAATTCTTCCTCTCAGACTCTAC 57.767 38.462 0.00 0.00 0.00 2.59
2210 2320 1.556911 TGAAGCTCATCTCTGGGTTCC 59.443 52.381 0.00 0.00 36.87 3.62
2232 2343 5.297547 TCTTTTGACTGACTCGCACTAAAT 58.702 37.500 0.00 0.00 0.00 1.40
2235 2346 4.022329 TGATCTTTTGACTGACTCGCACTA 60.022 41.667 0.00 0.00 0.00 2.74
2240 2351 4.051237 TGTGTGATCTTTTGACTGACTCG 58.949 43.478 0.00 0.00 0.00 4.18
2257 2376 2.880268 TGCCAGAGAAATTCAGTGTGTG 59.120 45.455 0.00 0.00 0.00 3.82
2258 2377 2.880890 GTGCCAGAGAAATTCAGTGTGT 59.119 45.455 0.00 0.00 0.00 3.72
2259 2378 3.058432 CAGTGCCAGAGAAATTCAGTGTG 60.058 47.826 0.00 0.00 0.00 3.82
2260 2379 3.144506 CAGTGCCAGAGAAATTCAGTGT 58.855 45.455 0.00 0.00 0.00 3.55
2261 2380 3.405831 TCAGTGCCAGAGAAATTCAGTG 58.594 45.455 0.00 0.00 0.00 3.66
2262 2381 3.777106 TCAGTGCCAGAGAAATTCAGT 57.223 42.857 0.00 0.00 0.00 3.41
2263 2382 4.082895 CCTTTCAGTGCCAGAGAAATTCAG 60.083 45.833 0.00 0.00 31.58 3.02
2264 2383 3.822735 CCTTTCAGTGCCAGAGAAATTCA 59.177 43.478 0.00 0.00 31.58 2.57
2265 2384 3.823304 ACCTTTCAGTGCCAGAGAAATTC 59.177 43.478 0.00 0.00 31.58 2.17
2266 2385 3.837355 ACCTTTCAGTGCCAGAGAAATT 58.163 40.909 0.00 0.00 31.58 1.82
2267 2386 3.515602 ACCTTTCAGTGCCAGAGAAAT 57.484 42.857 0.00 0.00 31.58 2.17
2268 2387 3.214328 GAACCTTTCAGTGCCAGAGAAA 58.786 45.455 0.00 0.00 0.00 2.52
2296 2415 1.272704 GGGAAGTTTGGAAGGAGCCAT 60.273 52.381 0.00 0.00 37.86 4.40
2299 2418 1.995376 TTGGGAAGTTTGGAAGGAGC 58.005 50.000 0.00 0.00 0.00 4.70
2311 2430 6.040209 TGATCATTTTGGTGATTTGGGAAG 57.960 37.500 0.00 0.00 38.88 3.46
2347 2466 6.699575 AAAGATATGACAAAGTATGCCACC 57.300 37.500 0.00 0.00 0.00 4.61
2436 2566 9.998106 ACTCATTACACAAGTACTAGAAAACAT 57.002 29.630 0.00 0.00 0.00 2.71
2457 2662 7.055378 ACTCATTCGACCTAGTAACTACTCAT 58.945 38.462 0.00 0.00 37.73 2.90
2480 2685 4.482990 ACAGGAAATGGTGAAATGGAACT 58.517 39.130 0.00 0.00 0.00 3.01
2527 2732 8.715191 TTCAAACATTTTTGTGTTAGAAGCAT 57.285 26.923 4.35 0.00 41.22 3.79
2536 2741 6.884280 TTGGGTTTTCAAACATTTTTGTGT 57.116 29.167 4.35 0.00 42.51 3.72
2555 2761 5.243730 ACAGAACAACAGGACAAATATTGGG 59.756 40.000 0.00 0.00 34.12 4.12
2588 2796 4.020839 AGGTTCAAGAAATTGATGGGCAAG 60.021 41.667 0.00 0.00 40.42 4.01
2598 2806 5.879777 CACACCCAAAAAGGTTCAAGAAATT 59.120 36.000 0.00 0.00 38.39 1.82
2682 2900 7.757941 TTTCCATGATTACAAGATGACACAA 57.242 32.000 0.00 0.00 0.00 3.33
2719 2938 0.660005 TTGGTAACGTCGACGGTTCG 60.660 55.000 37.89 16.53 44.95 3.95
2725 2944 2.598205 GCAAGTGTTTGGTAACGTCGAC 60.598 50.000 5.18 5.18 37.06 4.20
2760 2982 5.663106 AGGTCAGCAAGTAATTAGGATCAGA 59.337 40.000 0.00 0.00 0.00 3.27
2767 2989 9.250624 GATAGTGTTAGGTCAGCAAGTAATTAG 57.749 37.037 0.00 0.00 0.00 1.73
2825 3047 1.947456 TGGTCGATGTCGTCCTATCAG 59.053 52.381 17.06 0.00 45.43 2.90
2842 3064 0.702316 GGTGGGTAACTGGGAATGGT 59.298 55.000 0.00 0.00 0.00 3.55
2884 3106 0.958876 CCAGAGCTTGCTGCATGTGA 60.959 55.000 15.71 0.00 45.94 3.58
2908 3130 5.880332 TGTATCTGGGTTTATGCTTTCTGTC 59.120 40.000 0.00 0.00 0.00 3.51
3047 3285 0.322456 TATGCAGTGTGCCTGGAACC 60.322 55.000 1.39 0.00 45.35 3.62
3103 3341 0.250727 TGCAGGGAGGTACACTTTGC 60.251 55.000 0.00 0.00 34.16 3.68
3160 3398 6.427547 TGAAATCGTTATTCAACCGGTTAAGT 59.572 34.615 21.79 4.81 34.04 2.24
3168 3406 4.201920 GGGAGCTGAAATCGTTATTCAACC 60.202 45.833 0.00 0.00 36.43 3.77
3216 3455 6.550481 TGCATAAATAAGCTTGATCCCATTGA 59.450 34.615 9.86 0.00 0.00 2.57
3256 3495 0.438830 GAACATCAGGCGTGTCGTTC 59.561 55.000 19.83 19.83 32.58 3.95
3275 3514 1.741706 CTCAAGTGTTGCTGCCCATAG 59.258 52.381 0.00 0.00 0.00 2.23
3285 3524 1.875009 TGCTCTCTGCTCAAGTGTTG 58.125 50.000 0.00 0.00 43.37 3.33
3286 3525 2.302445 AGATGCTCTCTGCTCAAGTGTT 59.698 45.455 0.00 0.00 43.37 3.32
3292 3531 3.690475 TTTTGAGATGCTCTCTGCTCA 57.310 42.857 12.45 0.00 43.73 4.26
3339 3578 3.076182 ACCCAGAGAGAAGAGGAAGTACA 59.924 47.826 0.00 0.00 0.00 2.90
3389 3628 3.452474 GAGCAGTTCAGCACCTATACAG 58.548 50.000 0.00 0.00 36.85 2.74
3434 3673 5.413499 GTTGAAATGCCATGCTTAACTGAT 58.587 37.500 0.00 0.00 0.00 2.90
3539 3778 2.497273 CCGGGATCCAAAAGCAATTTCT 59.503 45.455 15.23 0.00 0.00 2.52
3594 3833 8.840833 ACTTTAAAGACATGGTTTTTGTTTGT 57.159 26.923 21.92 0.00 0.00 2.83
3597 3836 9.495572 TGAAACTTTAAAGACATGGTTTTTGTT 57.504 25.926 21.92 0.00 0.00 2.83
3598 3837 9.495572 TTGAAACTTTAAAGACATGGTTTTTGT 57.504 25.926 21.92 0.00 0.00 2.83
3637 3876 3.456380 ACCCTAGGTTCATGTGCAAAT 57.544 42.857 8.29 0.00 27.29 2.32
3640 3879 1.423541 ACAACCCTAGGTTCATGTGCA 59.576 47.619 8.29 0.00 43.05 4.57
3641 3880 2.200373 ACAACCCTAGGTTCATGTGC 57.800 50.000 8.29 0.00 43.05 4.57
3645 3884 8.013667 AGATCTAGAATACAACCCTAGGTTCAT 58.986 37.037 8.29 0.00 43.05 2.57
3680 3919 9.258826 TGAACCACAACAATTTTAATCATGAAG 57.741 29.630 0.00 0.00 0.00 3.02
3682 3921 9.258826 CTTGAACCACAACAATTTTAATCATGA 57.741 29.630 0.00 0.00 34.56 3.07
3683 3922 8.011106 GCTTGAACCACAACAATTTTAATCATG 58.989 33.333 0.00 0.00 34.56 3.07
3684 3923 7.933033 AGCTTGAACCACAACAATTTTAATCAT 59.067 29.630 0.00 0.00 34.56 2.45
3685 3924 7.224362 CAGCTTGAACCACAACAATTTTAATCA 59.776 33.333 0.00 0.00 34.56 2.57
3686 3925 7.566709 CAGCTTGAACCACAACAATTTTAATC 58.433 34.615 0.00 0.00 34.56 1.75
3687 3926 6.018016 GCAGCTTGAACCACAACAATTTTAAT 60.018 34.615 0.00 0.00 34.56 1.40
3688 3927 5.293079 GCAGCTTGAACCACAACAATTTTAA 59.707 36.000 0.00 0.00 34.56 1.52
3689 3928 4.808364 GCAGCTTGAACCACAACAATTTTA 59.192 37.500 0.00 0.00 34.56 1.52
3692 3931 2.168106 TGCAGCTTGAACCACAACAATT 59.832 40.909 0.00 0.00 34.56 2.32
3694 3933 1.135141 GTGCAGCTTGAACCACAACAA 60.135 47.619 0.00 0.00 34.56 2.83
3695 3934 0.455410 GTGCAGCTTGAACCACAACA 59.545 50.000 0.00 0.00 34.56 3.33
3696 3935 0.455410 TGTGCAGCTTGAACCACAAC 59.545 50.000 0.00 0.00 35.48 3.32
3845 4084 4.730949 AATCTGAAGAAATGCACATGGG 57.269 40.909 0.00 0.00 0.00 4.00
3897 4136 4.769345 TGGAGCCCTGTTTTTGAAAAAT 57.231 36.364 6.35 0.00 0.00 1.82
3904 4146 1.928868 CTCCATGGAGCCCTGTTTTT 58.071 50.000 28.45 0.00 35.31 1.94
3977 4219 8.192774 CCACGAACATGTAGGTTTACTTCTATA 58.807 37.037 0.00 0.00 0.00 1.31
3978 4220 7.039882 CCACGAACATGTAGGTTTACTTCTAT 58.960 38.462 0.00 0.00 0.00 1.98
3979 4221 6.015180 ACCACGAACATGTAGGTTTACTTCTA 60.015 38.462 0.00 0.00 0.00 2.10
3999 4241 2.350772 GGCAAATTCTCTCAACACCACG 60.351 50.000 0.00 0.00 0.00 4.94
4000 4242 2.622942 TGGCAAATTCTCTCAACACCAC 59.377 45.455 0.00 0.00 0.00 4.16
4001 4243 2.942804 TGGCAAATTCTCTCAACACCA 58.057 42.857 0.00 0.00 0.00 4.17
4002 4244 3.119352 GGATGGCAAATTCTCTCAACACC 60.119 47.826 0.00 0.00 0.00 4.16
4003 4245 3.507233 TGGATGGCAAATTCTCTCAACAC 59.493 43.478 0.00 0.00 0.00 3.32
4007 4249 7.664552 ATAAATTGGATGGCAAATTCTCTCA 57.335 32.000 0.00 0.00 0.00 3.27
4018 4260 9.646427 TTTACAGTGTAAAATAAATTGGATGGC 57.354 29.630 23.06 0.00 0.00 4.40
4051 4298 2.986019 TCCCTTCCAGAAATCCTTGACA 59.014 45.455 0.00 0.00 0.00 3.58
4053 4300 3.397618 TGTTCCCTTCCAGAAATCCTTGA 59.602 43.478 0.00 0.00 0.00 3.02
4063 4311 2.752903 CGGGTTTAATGTTCCCTTCCAG 59.247 50.000 0.00 0.00 39.10 3.86
4064 4312 2.108601 ACGGGTTTAATGTTCCCTTCCA 59.891 45.455 0.00 0.00 39.10 3.53
4083 4331 1.334054 CGTTCTCCCGACACTTAACG 58.666 55.000 0.00 0.00 34.54 3.18
4084 4332 1.706443 CCGTTCTCCCGACACTTAAC 58.294 55.000 0.00 0.00 0.00 2.01
4085 4333 0.037975 GCCGTTCTCCCGACACTTAA 60.038 55.000 0.00 0.00 0.00 1.85
4086 4334 1.588082 GCCGTTCTCCCGACACTTA 59.412 57.895 0.00 0.00 0.00 2.24
4087 4335 2.342648 GCCGTTCTCCCGACACTT 59.657 61.111 0.00 0.00 0.00 3.16
4088 4336 4.052229 CGCCGTTCTCCCGACACT 62.052 66.667 0.00 0.00 0.00 3.55
4097 4345 4.344865 ATGGTTGCCCGCCGTTCT 62.345 61.111 0.00 0.00 0.00 3.01
4098 4346 4.114997 CATGGTTGCCCGCCGTTC 62.115 66.667 0.00 0.00 0.00 3.95
4099 4347 4.966787 ACATGGTTGCCCGCCGTT 62.967 61.111 0.00 0.00 0.00 4.44
4118 4366 2.086251 AACCAGTTTGCGCCACATGG 62.086 55.000 4.18 11.18 38.53 3.66
4119 4367 0.940519 CAACCAGTTTGCGCCACATG 60.941 55.000 4.18 0.00 0.00 3.21
4120 4368 1.363443 CAACCAGTTTGCGCCACAT 59.637 52.632 4.18 0.00 0.00 3.21
4121 4369 2.780094 CCAACCAGTTTGCGCCACA 61.780 57.895 4.18 0.00 33.34 4.17
4122 4370 2.027460 CCAACCAGTTTGCGCCAC 59.973 61.111 4.18 0.83 33.34 5.01
4123 4371 3.910490 GCCAACCAGTTTGCGCCA 61.910 61.111 4.18 0.00 33.34 5.69
4124 4372 4.662961 GGCCAACCAGTTTGCGCC 62.663 66.667 4.18 0.00 41.47 6.53
4125 4373 4.999939 CGGCCAACCAGTTTGCGC 63.000 66.667 2.24 0.00 32.64 6.09
4126 4374 4.999939 GCGGCCAACCAGTTTGCG 63.000 66.667 2.24 0.00 32.64 4.85
4127 4375 4.999939 CGCGGCCAACCAGTTTGC 63.000 66.667 2.24 0.00 33.34 3.68
4128 4376 4.341502 CCGCGGCCAACCAGTTTG 62.342 66.667 14.67 0.00 34.57 2.93
4129 4377 4.887190 ACCGCGGCCAACCAGTTT 62.887 61.111 28.58 0.00 34.57 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.