Multiple sequence alignment - TraesCS7A01G368500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G368500 chr7A 100.000 3470 0 0 1 3470 541897830 541901299 0.000000e+00 6408.0
1 TraesCS7A01G368500 chr7A 87.444 223 18 6 2891 3111 217390258 217390472 7.440000e-62 248.0
2 TraesCS7A01G368500 chr7D 91.073 2722 137 45 1 2665 458355866 458353194 0.000000e+00 3583.0
3 TraesCS7A01G368500 chr7D 85.859 198 22 4 2884 3078 524310228 524310034 4.540000e-49 206.0
4 TraesCS7A01G368500 chr7D 85.279 197 23 4 2885 3078 524302604 524302411 7.600000e-47 198.0
5 TraesCS7A01G368500 chr7B 90.290 2585 154 36 1 2550 480206989 480204467 0.000000e+00 3293.0
6 TraesCS7A01G368500 chr7B 84.694 196 23 5 2546 2739 480204282 480204092 4.570000e-44 189.0
7 TraesCS7A01G368500 chr6B 89.935 2007 134 34 740 2705 183611458 183609479 0.000000e+00 2525.0
8 TraesCS7A01G368500 chr6B 88.202 178 18 2 2894 3071 255532877 255533051 3.510000e-50 209.0
9 TraesCS7A01G368500 chr6B 82.203 118 20 1 3106 3223 82753018 82753134 2.200000e-17 100.0
10 TraesCS7A01G368500 chr6B 92.157 51 3 1 3057 3107 82752605 82752654 1.730000e-08 71.3
11 TraesCS7A01G368500 chr6D 89.468 1842 117 35 766 2569 99235484 99233682 0.000000e+00 2255.0
12 TraesCS7A01G368500 chr6D 80.282 284 42 4 3112 3390 69826508 69826234 5.870000e-48 202.0
13 TraesCS7A01G368500 chr6D 79.577 284 44 4 3112 3390 69790060 69789786 1.270000e-44 191.0
14 TraesCS7A01G368500 chr6A 86.446 1992 139 43 743 2687 119595281 119593374 0.000000e+00 2061.0
15 TraesCS7A01G368500 chr2A 88.456 719 71 7 1373 2079 137530267 137529549 0.000000e+00 857.0
16 TraesCS7A01G368500 chr2A 91.236 445 36 1 931 1375 137537783 137537342 1.380000e-168 603.0
17 TraesCS7A01G368500 chr1D 83.692 325 47 2 3106 3430 413229001 413228683 5.630000e-78 302.0
18 TraesCS7A01G368500 chr1D 84.348 230 25 8 2882 3107 454299912 454300134 7.540000e-52 215.0
19 TraesCS7A01G368500 chr1D 80.435 92 14 4 2081 2170 399414145 399414056 2.240000e-07 67.6
20 TraesCS7A01G368500 chr3B 89.333 225 20 2 2883 3107 225802195 225802415 2.640000e-71 279.0
21 TraesCS7A01G368500 chr4D 88.841 233 15 8 2885 3114 486097695 486097471 3.410000e-70 276.0
22 TraesCS7A01G368500 chr4D 84.884 86 13 0 3309 3394 5248928 5248843 1.720000e-13 87.9
23 TraesCS7A01G368500 chr4D 94.872 39 2 0 3111 3149 137788753 137788715 1.040000e-05 62.1
24 TraesCS7A01G368500 chr1A 89.091 220 17 4 2891 3107 13167088 13166873 2.050000e-67 267.0
25 TraesCS7A01G368500 chr1A 77.844 167 31 5 3305 3470 367879212 367879373 7.930000e-17 99.0
26 TraesCS7A01G368500 chr3A 81.447 318 52 3 3106 3422 223538852 223538541 1.600000e-63 254.0
27 TraesCS7A01G368500 chr3A 87.500 224 18 6 2885 3107 175237173 175236959 2.070000e-62 250.0
28 TraesCS7A01G368500 chr3A 77.027 296 62 4 3112 3406 654196094 654195804 7.700000e-37 165.0
29 TraesCS7A01G368500 chr2D 80.223 359 51 12 3111 3467 129270200 129269860 5.750000e-63 252.0
30 TraesCS7A01G368500 chr2D 84.821 112 17 0 3296 3407 505775197 505775086 2.830000e-21 113.0
31 TraesCS7A01G368500 chr2D 87.342 79 10 0 3296 3374 641569454 641569532 1.330000e-14 91.6
32 TraesCS7A01G368500 chr4A 80.800 125 19 5 3279 3400 66936455 66936333 3.690000e-15 93.5
33 TraesCS7A01G368500 chr3D 97.297 37 1 0 3106 3142 166500581 166500617 2.890000e-06 63.9
34 TraesCS7A01G368500 chr1B 87.037 54 7 0 2081 2134 535908548 535908495 1.040000e-05 62.1
35 TraesCS7A01G368500 chr1B 79.348 92 15 4 2081 2170 535939125 535939036 1.040000e-05 62.1
36 TraesCS7A01G368500 chr1B 79.348 92 15 4 2081 2170 536121819 536121730 1.040000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G368500 chr7A 541897830 541901299 3469 False 6408 6408 100.000 1 3470 1 chr7A.!!$F2 3469
1 TraesCS7A01G368500 chr7D 458353194 458355866 2672 True 3583 3583 91.073 1 2665 1 chr7D.!!$R1 2664
2 TraesCS7A01G368500 chr7B 480204092 480206989 2897 True 1741 3293 87.492 1 2739 2 chr7B.!!$R1 2738
3 TraesCS7A01G368500 chr6B 183609479 183611458 1979 True 2525 2525 89.935 740 2705 1 chr6B.!!$R1 1965
4 TraesCS7A01G368500 chr6D 99233682 99235484 1802 True 2255 2255 89.468 766 2569 1 chr6D.!!$R3 1803
5 TraesCS7A01G368500 chr6A 119593374 119595281 1907 True 2061 2061 86.446 743 2687 1 chr6A.!!$R1 1944
6 TraesCS7A01G368500 chr2A 137529549 137530267 718 True 857 857 88.456 1373 2079 1 chr2A.!!$R1 706

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 537 0.106015 AGGGTGGCAGCAAGAAACTT 60.106 50.0 19.48 0.0 0.0 2.66 F
990 1070 0.312416 TTGCAAACCATACACGGCAC 59.688 50.0 0.00 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2421 2538 1.901085 GTCACAGTAGCTCCCCTGG 59.099 63.158 11.36 0.0 32.9 4.45 R
2742 3052 0.031043 CACAACCACATGCACACCAG 59.969 55.000 0.00 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.597255 AGAGATAGTCACACGAAGACGA 58.403 45.455 0.00 0.00 42.66 4.20
124 128 2.572191 TTATTACAGGCGTCAGTCCG 57.428 50.000 0.00 0.00 0.00 4.79
125 129 0.742505 TATTACAGGCGTCAGTCCGG 59.257 55.000 0.00 0.00 0.00 5.14
174 191 2.050985 GTGTGAGTTTGGCAGCGC 60.051 61.111 0.00 0.00 0.00 5.92
189 206 3.219117 CGCGAGCAGACATCATCG 58.781 61.111 0.00 0.00 38.19 3.84
197 219 1.270518 GCAGACATCATCGTGGCCTAT 60.271 52.381 3.32 0.00 0.00 2.57
219 241 2.426738 GAGTCTGTCTCTCATGAGGTGG 59.573 54.545 22.42 12.75 40.58 4.61
235 257 0.659957 GTGGCAGGCGATGATCTTTC 59.340 55.000 0.00 0.00 0.00 2.62
239 261 1.202627 GCAGGCGATGATCTTTCCTCT 60.203 52.381 0.00 0.00 0.00 3.69
258 280 2.573462 TCTGCTTTGGACAATAGAGCCT 59.427 45.455 5.14 0.00 32.53 4.58
276 298 4.964593 AGCCTGTTGAAGCATTTTGATTT 58.035 34.783 0.00 0.00 0.00 2.17
280 302 5.463061 CCTGTTGAAGCATTTTGATTTTCGT 59.537 36.000 0.00 0.00 0.00 3.85
309 331 4.134563 GACCGTTCAATTGCATATACCCT 58.865 43.478 0.00 0.00 0.00 4.34
310 332 4.532834 ACCGTTCAATTGCATATACCCTT 58.467 39.130 0.00 0.00 0.00 3.95
375 397 7.450074 TCAACTTTGTGTATGAATCTGTACCT 58.550 34.615 0.00 0.00 0.00 3.08
391 413 5.087391 TGTACCTACCACGCAAATTCATA 57.913 39.130 0.00 0.00 0.00 2.15
434 456 2.294233 TCTTACGTGAAAGGTGTACGCT 59.706 45.455 6.35 0.00 41.19 5.07
454 476 3.305629 GCTAAGAGAAGTGCATTGTCTCG 59.694 47.826 14.80 8.56 40.49 4.04
491 513 3.005155 ACAGAGCCATGAAAAGAAGCAAC 59.995 43.478 0.00 0.00 0.00 4.17
506 528 1.741770 CAACGAGTAGGGTGGCAGC 60.742 63.158 8.47 8.47 0.00 5.25
515 537 0.106015 AGGGTGGCAGCAAGAAACTT 60.106 50.000 19.48 0.00 0.00 2.66
521 543 1.286880 CAGCAAGAAACTTGCCCCG 59.713 57.895 25.83 14.95 45.98 5.73
524 546 1.734388 GCAAGAAACTTGCCCCGTGT 61.734 55.000 21.13 0.00 39.38 4.49
543 565 5.107453 CCGTGTGAACTGAAATTGACTCTAC 60.107 44.000 0.00 0.00 0.00 2.59
554 576 6.423905 TGAAATTGACTCTACTGCAACACTAC 59.576 38.462 0.00 0.00 0.00 2.73
616 638 2.992593 TGCTATTGCCATAACGAACCA 58.007 42.857 0.00 0.00 38.71 3.67
645 679 3.202097 TCTTTGCTGTCACACGATTTCA 58.798 40.909 0.00 0.00 0.00 2.69
650 684 3.814842 TGCTGTCACACGATTTCAGAAAT 59.185 39.130 8.20 8.20 0.00 2.17
695 729 3.004419 GTGCACTCAACCTTAACTTTCCC 59.996 47.826 10.32 0.00 0.00 3.97
698 732 4.204012 CACTCAACCTTAACTTTCCCACA 58.796 43.478 0.00 0.00 0.00 4.17
699 733 4.827284 CACTCAACCTTAACTTTCCCACAT 59.173 41.667 0.00 0.00 0.00 3.21
702 736 7.013846 CACTCAACCTTAACTTTCCCACATTTA 59.986 37.037 0.00 0.00 0.00 1.40
717 751 5.323900 CCACATTTAAAGACGCTGTATGTG 58.676 41.667 0.00 0.00 40.43 3.21
718 752 5.121611 CCACATTTAAAGACGCTGTATGTGA 59.878 40.000 12.42 0.00 42.26 3.58
719 753 6.015504 CACATTTAAAGACGCTGTATGTGAC 58.984 40.000 0.00 0.00 42.26 3.67
720 754 5.699001 ACATTTAAAGACGCTGTATGTGACA 59.301 36.000 0.00 0.00 36.35 3.58
722 756 5.839262 TTAAAGACGCTGTATGTGACAAG 57.161 39.130 0.00 0.00 37.70 3.16
723 757 3.660501 AAGACGCTGTATGTGACAAGA 57.339 42.857 0.00 0.00 37.70 3.02
725 759 3.318017 AGACGCTGTATGTGACAAGAAC 58.682 45.455 0.00 0.00 37.70 3.01
727 761 4.217767 AGACGCTGTATGTGACAAGAACTA 59.782 41.667 0.00 0.00 37.70 2.24
728 762 4.486090 ACGCTGTATGTGACAAGAACTAG 58.514 43.478 0.00 0.00 37.70 2.57
729 763 4.022242 ACGCTGTATGTGACAAGAACTAGT 60.022 41.667 0.00 0.00 37.70 2.57
730 764 4.324669 CGCTGTATGTGACAAGAACTAGTG 59.675 45.833 0.00 0.00 37.70 2.74
731 765 4.627467 GCTGTATGTGACAAGAACTAGTGG 59.373 45.833 0.00 0.00 37.70 4.00
732 766 5.566826 GCTGTATGTGACAAGAACTAGTGGA 60.567 44.000 0.00 0.00 37.70 4.02
733 767 6.025749 TGTATGTGACAAGAACTAGTGGAG 57.974 41.667 0.00 0.00 34.15 3.86
734 768 5.538813 TGTATGTGACAAGAACTAGTGGAGT 59.461 40.000 0.00 0.00 35.72 3.85
735 769 6.717997 TGTATGTGACAAGAACTAGTGGAGTA 59.282 38.462 0.00 0.00 33.80 2.59
736 770 6.859112 ATGTGACAAGAACTAGTGGAGTAT 57.141 37.500 0.00 0.00 37.44 2.12
737 771 7.956328 ATGTGACAAGAACTAGTGGAGTATA 57.044 36.000 0.00 0.00 37.44 1.47
738 772 7.770366 TGTGACAAGAACTAGTGGAGTATAA 57.230 36.000 0.00 0.00 37.44 0.98
831 882 9.270640 GTCTGCAATAATACAGAGATCATTTCT 57.729 33.333 0.00 0.00 43.30 2.52
855 906 8.695456 TCTAGAATAGCATTGATTCCGCATATA 58.305 33.333 0.00 0.00 38.99 0.86
857 908 8.375608 AGAATAGCATTGATTCCGCATATATC 57.624 34.615 0.00 0.00 34.42 1.63
858 909 7.443575 AGAATAGCATTGATTCCGCATATATCC 59.556 37.037 0.00 0.00 34.42 2.59
917 979 6.465439 TCCGAGCATTGAGTTTCTCTATAA 57.535 37.500 0.00 0.00 0.00 0.98
929 1009 6.334202 AGTTTCTCTATAAAGGAGCTCAACG 58.666 40.000 17.19 0.00 0.00 4.10
954 1034 1.473434 GCCATAGACTTCCACCCTTCG 60.473 57.143 0.00 0.00 0.00 3.79
969 1049 1.151668 CTTCGCAAGTCAGAACCCAG 58.848 55.000 0.00 0.00 39.48 4.45
990 1070 0.312416 TTGCAAACCATACACGGCAC 59.688 50.000 0.00 0.00 0.00 5.01
1131 1214 2.033141 CACACCCTCCCACTGCTG 59.967 66.667 0.00 0.00 0.00 4.41
1165 1248 1.654220 CTCACCGTGCACCAAAAGG 59.346 57.895 12.15 8.79 0.00 3.11
1174 1257 2.032071 ACCAAAAGGACCTCCGCG 59.968 61.111 0.00 0.00 42.08 6.46
1203 1286 3.284449 GTCACGCCCGCCAACTTT 61.284 61.111 0.00 0.00 0.00 2.66
1519 1615 4.228097 CCGCCTGCAAATCGCTCG 62.228 66.667 0.00 0.00 43.06 5.03
1588 1696 1.146358 GGAGCACGTAAGGATCACGC 61.146 60.000 4.15 0.00 43.10 5.34
1737 1845 2.679837 GTTGGACGAGGACTACGTATCA 59.320 50.000 0.00 0.00 43.97 2.15
2079 2187 2.105930 CAGAGGAGCGTGCTAGCC 59.894 66.667 13.29 2.49 38.01 3.93
2415 2532 1.572085 CGTTGCTGAAGCTGGTGGAG 61.572 60.000 3.61 0.00 42.66 3.86
2421 2538 1.220477 GAAGCTGGTGGAGGAGCTC 59.780 63.158 4.71 4.71 44.97 4.09
2445 2562 1.469940 GGGAGCTACTGTGACGTCATG 60.470 57.143 23.12 19.15 0.00 3.07
2447 2564 1.202582 GAGCTACTGTGACGTCATGGT 59.797 52.381 23.12 23.00 0.00 3.55
2458 2575 1.875963 GTCATGGTGGCGAACAAGG 59.124 57.895 0.00 0.00 0.00 3.61
2459 2576 0.605319 GTCATGGTGGCGAACAAGGA 60.605 55.000 0.00 0.00 0.00 3.36
2460 2577 0.327924 TCATGGTGGCGAACAAGGAT 59.672 50.000 0.00 0.00 0.00 3.24
2461 2578 0.734889 CATGGTGGCGAACAAGGATC 59.265 55.000 0.00 0.00 0.00 3.36
2462 2579 0.744414 ATGGTGGCGAACAAGGATCG 60.744 55.000 0.00 0.00 42.99 3.69
2520 2638 2.324477 GGACGCGCATGATTTCGG 59.676 61.111 5.73 0.00 0.00 4.30
2529 2647 3.485743 GCGCATGATTTCGGAAAATAACC 59.514 43.478 7.33 0.00 35.21 2.85
2544 2664 4.473477 AATAACCTCAGCTCCTGTGTAC 57.527 45.455 0.00 0.00 32.61 2.90
2620 2929 4.745125 CCATTAATTCTGTAGCGTCGTGAT 59.255 41.667 0.00 0.00 0.00 3.06
2634 2943 0.295763 CGTGATCGTGCACTTCATCG 59.704 55.000 16.19 17.22 36.65 3.84
2643 2952 2.437359 ACTTCATCGGGCTGCTGC 60.437 61.111 7.10 7.10 38.76 5.25
2655 2964 1.068474 GCTGCTGCTCATTTGCTTTG 58.932 50.000 8.53 0.00 36.03 2.77
2714 3024 8.020244 CACTTTAATGGTGTTTTGCAAAACTTT 58.980 29.630 39.89 30.63 46.37 2.66
2717 3027 5.710613 ATGGTGTTTTGCAAAACTTTACG 57.289 34.783 39.89 0.00 46.37 3.18
2728 3038 9.953697 TTTGCAAAACTTTACGATAATTAGTGT 57.046 25.926 10.02 0.00 0.00 3.55
2746 3056 9.969001 AATTAGTGTATATGGTTTTGTACTGGT 57.031 29.630 0.00 0.00 0.00 4.00
2747 3057 8.780846 TTAGTGTATATGGTTTTGTACTGGTG 57.219 34.615 0.00 0.00 0.00 4.17
2748 3058 6.775708 AGTGTATATGGTTTTGTACTGGTGT 58.224 36.000 0.00 0.00 0.00 4.16
2749 3059 6.653320 AGTGTATATGGTTTTGTACTGGTGTG 59.347 38.462 0.00 0.00 0.00 3.82
2750 3060 5.413213 TGTATATGGTTTTGTACTGGTGTGC 59.587 40.000 0.00 0.00 0.00 4.57
2751 3061 2.130272 TGGTTTTGTACTGGTGTGCA 57.870 45.000 0.00 0.00 37.03 4.57
2752 3062 2.660572 TGGTTTTGTACTGGTGTGCAT 58.339 42.857 0.00 0.00 38.52 3.96
2753 3063 2.360483 TGGTTTTGTACTGGTGTGCATG 59.640 45.455 0.00 0.00 38.52 4.06
2754 3064 2.360801 GGTTTTGTACTGGTGTGCATGT 59.639 45.455 0.00 0.00 38.52 3.21
2755 3065 3.371168 GTTTTGTACTGGTGTGCATGTG 58.629 45.455 0.00 0.00 38.52 3.21
2756 3066 1.603456 TTGTACTGGTGTGCATGTGG 58.397 50.000 0.00 0.00 38.52 4.17
2757 3067 0.472044 TGTACTGGTGTGCATGTGGT 59.528 50.000 0.00 0.00 33.97 4.16
2758 3068 1.133945 TGTACTGGTGTGCATGTGGTT 60.134 47.619 0.00 0.00 33.97 3.67
2759 3069 1.266718 GTACTGGTGTGCATGTGGTTG 59.733 52.381 0.00 0.00 0.00 3.77
2760 3070 0.395586 ACTGGTGTGCATGTGGTTGT 60.396 50.000 0.00 0.00 0.00 3.32
2761 3071 0.031043 CTGGTGTGCATGTGGTTGTG 59.969 55.000 0.00 0.00 0.00 3.33
2762 3072 0.394899 TGGTGTGCATGTGGTTGTGA 60.395 50.000 0.00 0.00 0.00 3.58
2763 3073 0.311790 GGTGTGCATGTGGTTGTGAG 59.688 55.000 0.00 0.00 0.00 3.51
2764 3074 0.311790 GTGTGCATGTGGTTGTGAGG 59.688 55.000 0.00 0.00 0.00 3.86
2765 3075 0.106769 TGTGCATGTGGTTGTGAGGT 60.107 50.000 0.00 0.00 0.00 3.85
2766 3076 0.593128 GTGCATGTGGTTGTGAGGTC 59.407 55.000 0.00 0.00 0.00 3.85
2767 3077 0.473755 TGCATGTGGTTGTGAGGTCT 59.526 50.000 0.00 0.00 0.00 3.85
2768 3078 0.877071 GCATGTGGTTGTGAGGTCTG 59.123 55.000 0.00 0.00 0.00 3.51
2769 3079 1.543208 GCATGTGGTTGTGAGGTCTGA 60.543 52.381 0.00 0.00 0.00 3.27
2770 3080 2.877300 GCATGTGGTTGTGAGGTCTGAT 60.877 50.000 0.00 0.00 0.00 2.90
2771 3081 2.549064 TGTGGTTGTGAGGTCTGATG 57.451 50.000 0.00 0.00 0.00 3.07
2772 3082 2.046292 TGTGGTTGTGAGGTCTGATGA 58.954 47.619 0.00 0.00 0.00 2.92
2773 3083 2.639347 TGTGGTTGTGAGGTCTGATGAT 59.361 45.455 0.00 0.00 0.00 2.45
2774 3084 3.072915 TGTGGTTGTGAGGTCTGATGATT 59.927 43.478 0.00 0.00 0.00 2.57
2775 3085 4.074970 GTGGTTGTGAGGTCTGATGATTT 58.925 43.478 0.00 0.00 0.00 2.17
2776 3086 5.221823 TGTGGTTGTGAGGTCTGATGATTTA 60.222 40.000 0.00 0.00 0.00 1.40
2777 3087 5.882557 GTGGTTGTGAGGTCTGATGATTTAT 59.117 40.000 0.00 0.00 0.00 1.40
2778 3088 6.037610 GTGGTTGTGAGGTCTGATGATTTATC 59.962 42.308 0.00 0.00 36.29 1.75
2779 3089 6.070021 TGGTTGTGAGGTCTGATGATTTATCT 60.070 38.462 0.00 0.00 36.71 1.98
2780 3090 6.825721 GGTTGTGAGGTCTGATGATTTATCTT 59.174 38.462 0.00 0.00 36.71 2.40
2781 3091 7.337942 GGTTGTGAGGTCTGATGATTTATCTTT 59.662 37.037 0.00 0.00 36.71 2.52
2782 3092 9.383519 GTTGTGAGGTCTGATGATTTATCTTTA 57.616 33.333 0.00 0.00 36.71 1.85
2786 3096 9.060347 TGAGGTCTGATGATTTATCTTTATTGC 57.940 33.333 0.00 0.00 36.71 3.56
2787 3097 8.092521 AGGTCTGATGATTTATCTTTATTGCG 57.907 34.615 0.00 0.00 36.71 4.85
2788 3098 6.798959 GGTCTGATGATTTATCTTTATTGCGC 59.201 38.462 0.00 0.00 36.71 6.09
2789 3099 6.798959 GTCTGATGATTTATCTTTATTGCGCC 59.201 38.462 4.18 0.00 36.71 6.53
2790 3100 6.486320 TCTGATGATTTATCTTTATTGCGCCA 59.514 34.615 4.18 0.00 36.71 5.69
2791 3101 7.013178 TCTGATGATTTATCTTTATTGCGCCAA 59.987 33.333 4.18 0.00 36.71 4.52
2792 3102 7.140705 TGATGATTTATCTTTATTGCGCCAAG 58.859 34.615 4.18 1.89 36.71 3.61
2793 3103 6.691754 TGATTTATCTTTATTGCGCCAAGA 57.308 33.333 4.18 7.92 0.00 3.02
2794 3104 7.094508 TGATTTATCTTTATTGCGCCAAGAA 57.905 32.000 4.18 0.00 30.43 2.52
2795 3105 7.542890 TGATTTATCTTTATTGCGCCAAGAAA 58.457 30.769 4.18 8.43 34.22 2.52
2796 3106 8.031864 TGATTTATCTTTATTGCGCCAAGAAAA 58.968 29.630 4.18 10.44 34.82 2.29
2797 3107 7.810766 TTTATCTTTATTGCGCCAAGAAAAG 57.189 32.000 4.18 12.69 34.82 2.27
2798 3108 4.173036 TCTTTATTGCGCCAAGAAAAGG 57.827 40.909 4.18 0.00 34.82 3.11
2799 3109 3.572255 TCTTTATTGCGCCAAGAAAAGGT 59.428 39.130 4.18 0.00 34.82 3.50
2800 3110 4.762765 TCTTTATTGCGCCAAGAAAAGGTA 59.237 37.500 4.18 0.00 34.82 3.08
2801 3111 5.241949 TCTTTATTGCGCCAAGAAAAGGTAA 59.758 36.000 4.18 0.00 34.82 2.85
2802 3112 5.652994 TTATTGCGCCAAGAAAAGGTAAT 57.347 34.783 4.18 0.00 0.00 1.89
2803 3113 6.761099 TTATTGCGCCAAGAAAAGGTAATA 57.239 33.333 4.18 0.00 0.00 0.98
2804 3114 5.852282 ATTGCGCCAAGAAAAGGTAATAT 57.148 34.783 4.18 0.00 0.00 1.28
2805 3115 4.893424 TGCGCCAAGAAAAGGTAATATC 57.107 40.909 4.18 0.00 0.00 1.63
2806 3116 4.265893 TGCGCCAAGAAAAGGTAATATCA 58.734 39.130 4.18 0.00 0.00 2.15
2807 3117 4.702612 TGCGCCAAGAAAAGGTAATATCAA 59.297 37.500 4.18 0.00 0.00 2.57
2808 3118 5.163663 TGCGCCAAGAAAAGGTAATATCAAG 60.164 40.000 4.18 0.00 0.00 3.02
2809 3119 5.065988 GCGCCAAGAAAAGGTAATATCAAGA 59.934 40.000 0.00 0.00 0.00 3.02
2810 3120 6.404293 GCGCCAAGAAAAGGTAATATCAAGAA 60.404 38.462 0.00 0.00 0.00 2.52
2811 3121 7.535139 CGCCAAGAAAAGGTAATATCAAGAAA 58.465 34.615 0.00 0.00 0.00 2.52
2812 3122 8.190784 CGCCAAGAAAAGGTAATATCAAGAAAT 58.809 33.333 0.00 0.00 0.00 2.17
2854 3164 7.696992 AAAACTAAATATTTTCCAGAGCGGA 57.303 32.000 5.91 0.00 44.40 5.54
2862 3172 3.741029 TCCAGAGCGGAGATTTTCG 57.259 52.632 0.00 0.00 39.64 3.46
2863 3173 0.895530 TCCAGAGCGGAGATTTTCGT 59.104 50.000 0.00 0.00 39.64 3.85
2864 3174 1.002366 CCAGAGCGGAGATTTTCGTG 58.998 55.000 0.00 0.00 36.56 4.35
2865 3175 1.673033 CCAGAGCGGAGATTTTCGTGT 60.673 52.381 0.00 0.00 36.56 4.49
2866 3176 2.416836 CCAGAGCGGAGATTTTCGTGTA 60.417 50.000 0.00 0.00 36.56 2.90
2867 3177 3.448686 CAGAGCGGAGATTTTCGTGTAT 58.551 45.455 0.00 0.00 0.00 2.29
2868 3178 3.865745 CAGAGCGGAGATTTTCGTGTATT 59.134 43.478 0.00 0.00 0.00 1.89
2869 3179 4.026475 CAGAGCGGAGATTTTCGTGTATTC 60.026 45.833 0.00 0.00 0.00 1.75
2870 3180 4.113354 GAGCGGAGATTTTCGTGTATTCT 58.887 43.478 0.00 0.00 0.00 2.40
2871 3181 5.067413 AGAGCGGAGATTTTCGTGTATTCTA 59.933 40.000 0.00 0.00 0.00 2.10
2872 3182 5.657474 AGCGGAGATTTTCGTGTATTCTAA 58.343 37.500 0.00 0.00 0.00 2.10
2873 3183 5.749109 AGCGGAGATTTTCGTGTATTCTAAG 59.251 40.000 0.00 0.00 0.00 2.18
2874 3184 5.747197 GCGGAGATTTTCGTGTATTCTAAGA 59.253 40.000 0.00 0.00 0.00 2.10
2875 3185 6.074782 GCGGAGATTTTCGTGTATTCTAAGAG 60.075 42.308 0.00 0.00 0.00 2.85
2876 3186 6.074782 CGGAGATTTTCGTGTATTCTAAGAGC 60.075 42.308 0.00 0.00 0.00 4.09
2877 3187 6.757010 GGAGATTTTCGTGTATTCTAAGAGCA 59.243 38.462 0.00 0.00 0.00 4.26
2878 3188 7.439655 GGAGATTTTCGTGTATTCTAAGAGCAT 59.560 37.037 0.00 0.00 0.00 3.79
2879 3189 8.359060 AGATTTTCGTGTATTCTAAGAGCATC 57.641 34.615 0.00 0.00 0.00 3.91
2939 3249 2.412937 GCGGCCGCTGCAAAATAT 59.587 55.556 41.71 0.00 40.13 1.28
2940 3250 1.945662 GCGGCCGCTGCAAAATATG 60.946 57.895 41.71 1.28 40.13 1.78
2941 3251 1.299316 CGGCCGCTGCAAAATATGG 60.299 57.895 14.67 0.00 40.13 2.74
2942 3252 1.592400 GGCCGCTGCAAAATATGGC 60.592 57.895 1.55 1.90 41.72 4.40
2943 3253 1.945662 GCCGCTGCAAAATATGGCG 60.946 57.895 7.22 7.22 44.48 5.69
2944 3254 1.945662 CCGCTGCAAAATATGGCGC 60.946 57.895 8.56 0.00 43.70 6.53
2945 3255 2.287965 CGCTGCAAAATATGGCGCG 61.288 57.895 0.00 0.00 42.65 6.86
2946 3256 2.579574 GCTGCAAAATATGGCGCGC 61.580 57.895 25.94 25.94 0.00 6.86
2947 3257 2.277820 TGCAAAATATGGCGCGCG 60.278 55.556 28.44 28.44 0.00 6.86
2948 3258 3.681318 GCAAAATATGGCGCGCGC 61.681 61.111 44.40 44.40 41.06 6.86
2949 3259 3.378042 CAAAATATGGCGCGCGCG 61.378 61.111 45.73 45.73 43.06 6.86
2960 3270 3.611792 GCGCGCGAGTAGCTTCAG 61.612 66.667 37.18 0.00 45.59 3.02
2961 3271 3.611792 CGCGCGAGTAGCTTCAGC 61.612 66.667 28.94 0.00 45.59 4.26
2962 3272 2.507102 GCGCGAGTAGCTTCAGCA 60.507 61.111 12.10 0.00 45.59 4.41
2963 3273 2.512301 GCGCGAGTAGCTTCAGCAG 61.512 63.158 12.10 0.00 45.59 4.24
2964 3274 1.875813 CGCGAGTAGCTTCAGCAGG 60.876 63.158 0.00 0.00 45.59 4.85
2965 3275 2.170434 GCGAGTAGCTTCAGCAGGC 61.170 63.158 0.75 0.00 45.16 4.85
2966 3276 1.216444 CGAGTAGCTTCAGCAGGCA 59.784 57.895 0.75 0.00 45.16 4.75
2967 3277 1.080995 CGAGTAGCTTCAGCAGGCAC 61.081 60.000 0.75 0.00 45.16 5.01
2968 3278 1.079543 AGTAGCTTCAGCAGGCACG 60.080 57.895 0.75 0.00 45.16 5.34
2969 3279 2.434884 TAGCTTCAGCAGGCACGC 60.435 61.111 0.75 0.00 45.16 5.34
2970 3280 2.947532 TAGCTTCAGCAGGCACGCT 61.948 57.895 0.75 0.00 45.21 5.07
2971 3281 1.604147 TAGCTTCAGCAGGCACGCTA 61.604 55.000 0.75 0.00 41.38 4.26
2972 3282 2.034879 GCTTCAGCAGGCACGCTAA 61.035 57.895 0.79 0.00 41.38 3.09
2973 3283 1.577328 GCTTCAGCAGGCACGCTAAA 61.577 55.000 0.79 0.00 41.38 1.85
2974 3284 1.089920 CTTCAGCAGGCACGCTAAAT 58.910 50.000 0.79 0.00 41.38 1.40
2975 3285 1.470098 CTTCAGCAGGCACGCTAAATT 59.530 47.619 0.79 0.00 41.38 1.82
2976 3286 1.533625 TCAGCAGGCACGCTAAATTT 58.466 45.000 0.79 0.00 41.38 1.82
2977 3287 1.468520 TCAGCAGGCACGCTAAATTTC 59.531 47.619 0.00 0.00 41.38 2.17
2978 3288 0.811281 AGCAGGCACGCTAAATTTCC 59.189 50.000 0.00 0.00 41.55 3.13
2979 3289 0.525761 GCAGGCACGCTAAATTTCCA 59.474 50.000 0.00 0.00 0.00 3.53
2980 3290 1.468054 GCAGGCACGCTAAATTTCCAG 60.468 52.381 0.00 0.00 0.00 3.86
2981 3291 0.811281 AGGCACGCTAAATTTCCAGC 59.189 50.000 0.00 0.00 0.00 4.85
2985 3295 3.982771 GCTAAATTTCCAGCGCGC 58.017 55.556 26.66 26.66 0.00 6.86
2986 3296 1.934476 GCTAAATTTCCAGCGCGCG 60.934 57.895 28.44 28.44 0.00 6.86
2987 3297 1.713246 CTAAATTTCCAGCGCGCGA 59.287 52.632 37.18 15.66 0.00 5.87
2988 3298 0.315382 CTAAATTTCCAGCGCGCGAG 60.315 55.000 37.18 24.56 0.00 5.03
3001 3311 3.782244 GCGAGCAGCCGACACTTG 61.782 66.667 7.39 0.00 40.81 3.16
3002 3312 3.782244 CGAGCAGCCGACACTTGC 61.782 66.667 0.00 0.00 38.09 4.01
3003 3313 2.666190 GAGCAGCCGACACTTGCA 60.666 61.111 0.00 0.00 40.22 4.08
3004 3314 2.203195 AGCAGCCGACACTTGCAA 60.203 55.556 0.00 0.00 40.22 4.08
3005 3315 1.785041 GAGCAGCCGACACTTGCAAA 61.785 55.000 0.00 0.00 40.22 3.68
3006 3316 1.174712 AGCAGCCGACACTTGCAAAT 61.175 50.000 0.00 0.00 40.22 2.32
3007 3317 0.521291 GCAGCCGACACTTGCAAATA 59.479 50.000 0.00 0.00 37.75 1.40
3008 3318 1.466360 GCAGCCGACACTTGCAAATAG 60.466 52.381 0.00 0.00 37.75 1.73
3009 3319 0.804989 AGCCGACACTTGCAAATAGC 59.195 50.000 0.00 0.00 45.96 2.97
3025 3335 7.398834 GCAAATAGCATGATTTTACATGTCC 57.601 36.000 0.00 0.00 46.25 4.02
3026 3336 6.979817 GCAAATAGCATGATTTTACATGTCCA 59.020 34.615 0.00 0.00 46.25 4.02
3027 3337 7.654520 GCAAATAGCATGATTTTACATGTCCAT 59.345 33.333 0.00 0.00 46.25 3.41
3028 3338 9.537192 CAAATAGCATGATTTTACATGTCCATT 57.463 29.630 0.00 0.00 46.25 3.16
3030 3340 9.537192 AATAGCATGATTTTACATGTCCATTTG 57.463 29.630 0.00 0.00 46.25 2.32
3031 3341 7.172868 AGCATGATTTTACATGTCCATTTGA 57.827 32.000 0.00 0.00 46.25 2.69
3032 3342 7.037438 AGCATGATTTTACATGTCCATTTGAC 58.963 34.615 0.00 0.00 46.25 3.18
3048 3358 9.241317 GTCCATTTGACAATATGATGATGTTTC 57.759 33.333 10.21 0.00 43.85 2.78
3049 3359 8.968969 TCCATTTGACAATATGATGATGTTTCA 58.031 29.630 10.21 0.00 36.00 2.69
3050 3360 9.589111 CCATTTGACAATATGATGATGTTTCAA 57.411 29.630 10.21 0.00 34.96 2.69
3083 3393 9.995003 AACAAATATGCAAAAATAAGAGTTGGA 57.005 25.926 0.00 0.00 0.00 3.53
3084 3394 9.643693 ACAAATATGCAAAAATAAGAGTTGGAG 57.356 29.630 0.00 0.00 0.00 3.86
3085 3395 8.598075 CAAATATGCAAAAATAAGAGTTGGAGC 58.402 33.333 0.00 0.00 0.00 4.70
3086 3396 5.726980 ATGCAAAAATAAGAGTTGGAGCA 57.273 34.783 0.00 0.00 0.00 4.26
3087 3397 5.528043 TGCAAAAATAAGAGTTGGAGCAA 57.472 34.783 0.00 0.00 0.00 3.91
3088 3398 5.288804 TGCAAAAATAAGAGTTGGAGCAAC 58.711 37.500 0.00 0.00 43.83 4.17
3089 3399 5.163468 TGCAAAAATAAGAGTTGGAGCAACA 60.163 36.000 0.00 0.00 45.66 3.33
3090 3400 5.928264 GCAAAAATAAGAGTTGGAGCAACAT 59.072 36.000 0.00 0.00 45.66 2.71
3091 3401 7.090173 GCAAAAATAAGAGTTGGAGCAACATA 58.910 34.615 0.00 0.00 45.66 2.29
3092 3402 7.274250 GCAAAAATAAGAGTTGGAGCAACATAG 59.726 37.037 0.00 0.00 45.66 2.23
3093 3403 6.442513 AAATAAGAGTTGGAGCAACATAGC 57.557 37.500 0.00 0.00 45.66 2.97
3094 3404 3.423539 AAGAGTTGGAGCAACATAGCA 57.576 42.857 0.00 0.00 45.66 3.49
3095 3405 3.641434 AGAGTTGGAGCAACATAGCAT 57.359 42.857 0.00 0.00 45.66 3.79
3096 3406 4.760530 AGAGTTGGAGCAACATAGCATA 57.239 40.909 0.00 0.00 45.66 3.14
3097 3407 4.701765 AGAGTTGGAGCAACATAGCATAG 58.298 43.478 0.00 0.00 45.66 2.23
3098 3408 4.163078 AGAGTTGGAGCAACATAGCATAGT 59.837 41.667 0.00 0.00 45.66 2.12
3099 3409 4.848357 AGTTGGAGCAACATAGCATAGTT 58.152 39.130 0.00 0.00 45.66 2.24
3100 3410 4.878397 AGTTGGAGCAACATAGCATAGTTC 59.122 41.667 0.00 0.00 45.66 3.01
3101 3411 4.486125 TGGAGCAACATAGCATAGTTCA 57.514 40.909 0.00 0.00 36.85 3.18
3102 3412 4.842574 TGGAGCAACATAGCATAGTTCAA 58.157 39.130 0.00 0.00 36.85 2.69
3103 3413 5.439721 TGGAGCAACATAGCATAGTTCAAT 58.560 37.500 0.00 0.00 36.85 2.57
3104 3414 5.887598 TGGAGCAACATAGCATAGTTCAATT 59.112 36.000 0.00 0.00 36.85 2.32
3105 3415 6.183360 TGGAGCAACATAGCATAGTTCAATTG 60.183 38.462 0.00 0.00 36.85 2.32
3106 3416 5.585390 AGCAACATAGCATAGTTCAATTGC 58.415 37.500 0.00 0.00 40.09 3.56
3107 3417 4.741676 GCAACATAGCATAGTTCAATTGCC 59.258 41.667 0.00 0.00 37.07 4.52
3108 3418 4.818534 ACATAGCATAGTTCAATTGCCG 57.181 40.909 0.00 0.00 37.07 5.69
3109 3419 4.450976 ACATAGCATAGTTCAATTGCCGA 58.549 39.130 0.00 0.00 37.07 5.54
3110 3420 4.273480 ACATAGCATAGTTCAATTGCCGAC 59.727 41.667 0.00 0.00 37.07 4.79
3111 3421 1.665679 AGCATAGTTCAATTGCCGACG 59.334 47.619 0.00 0.00 37.07 5.12
3112 3422 1.268032 GCATAGTTCAATTGCCGACGG 60.268 52.381 10.29 10.29 0.00 4.79
3135 3445 4.697756 CCGAAGCTCAACCCCGCA 62.698 66.667 0.00 0.00 0.00 5.69
3136 3446 3.423154 CGAAGCTCAACCCCGCAC 61.423 66.667 0.00 0.00 0.00 5.34
3137 3447 2.032681 GAAGCTCAACCCCGCACT 59.967 61.111 0.00 0.00 0.00 4.40
3138 3448 1.295423 GAAGCTCAACCCCGCACTA 59.705 57.895 0.00 0.00 0.00 2.74
3139 3449 0.741221 GAAGCTCAACCCCGCACTAG 60.741 60.000 0.00 0.00 0.00 2.57
3140 3450 2.125106 GCTCAACCCCGCACTAGG 60.125 66.667 0.00 0.00 0.00 3.02
3150 3460 3.799755 GCACTAGGGTTTGCGGCG 61.800 66.667 0.51 0.51 0.00 6.46
3151 3461 3.124921 CACTAGGGTTTGCGGCGG 61.125 66.667 9.78 0.00 0.00 6.13
3152 3462 3.633116 ACTAGGGTTTGCGGCGGT 61.633 61.111 9.78 0.00 0.00 5.68
3153 3463 2.285024 ACTAGGGTTTGCGGCGGTA 61.285 57.895 9.78 0.00 0.00 4.02
3154 3464 1.520787 CTAGGGTTTGCGGCGGTAG 60.521 63.158 9.78 0.00 0.00 3.18
3155 3465 3.668980 TAGGGTTTGCGGCGGTAGC 62.669 63.158 9.78 0.00 44.18 3.58
3175 3485 3.329889 TGGCAACAGCGGAGGGAT 61.330 61.111 0.00 0.00 46.17 3.85
3176 3486 2.514824 GGCAACAGCGGAGGGATC 60.515 66.667 0.00 0.00 0.00 3.36
3177 3487 2.892425 GCAACAGCGGAGGGATCG 60.892 66.667 0.00 0.00 0.00 3.69
3185 3495 2.836360 GGAGGGATCGCGGGTGTA 60.836 66.667 6.13 0.00 0.00 2.90
3186 3496 2.728817 GAGGGATCGCGGGTGTAG 59.271 66.667 6.13 0.00 0.00 2.74
3187 3497 2.838225 AGGGATCGCGGGTGTAGG 60.838 66.667 6.13 0.00 0.00 3.18
3188 3498 3.925090 GGGATCGCGGGTGTAGGG 61.925 72.222 6.13 0.00 0.00 3.53
3189 3499 2.836360 GGATCGCGGGTGTAGGGA 60.836 66.667 6.13 0.00 35.07 4.20
3190 3500 2.728817 GATCGCGGGTGTAGGGAG 59.271 66.667 6.13 0.00 34.09 4.30
3191 3501 2.838225 ATCGCGGGTGTAGGGAGG 60.838 66.667 6.13 0.00 34.09 4.30
3195 3505 2.285144 CGGGTGTAGGGAGGGGTT 60.285 66.667 0.00 0.00 0.00 4.11
3196 3506 2.666098 CGGGTGTAGGGAGGGGTTG 61.666 68.421 0.00 0.00 0.00 3.77
3197 3507 2.306384 GGGTGTAGGGAGGGGTTGG 61.306 68.421 0.00 0.00 0.00 3.77
3198 3508 2.306384 GGTGTAGGGAGGGGTTGGG 61.306 68.421 0.00 0.00 0.00 4.12
3199 3509 1.229723 GTGTAGGGAGGGGTTGGGA 60.230 63.158 0.00 0.00 0.00 4.37
3200 3510 1.082206 TGTAGGGAGGGGTTGGGAG 59.918 63.158 0.00 0.00 0.00 4.30
3201 3511 1.693103 GTAGGGAGGGGTTGGGAGG 60.693 68.421 0.00 0.00 0.00 4.30
3202 3512 1.869946 TAGGGAGGGGTTGGGAGGA 60.870 63.158 0.00 0.00 0.00 3.71
3203 3513 1.243230 TAGGGAGGGGTTGGGAGGAT 61.243 60.000 0.00 0.00 0.00 3.24
3204 3514 1.243230 AGGGAGGGGTTGGGAGGATA 61.243 60.000 0.00 0.00 0.00 2.59
3205 3515 0.103876 GGGAGGGGTTGGGAGGATAT 60.104 60.000 0.00 0.00 0.00 1.63
3206 3516 1.363246 GGAGGGGTTGGGAGGATATC 58.637 60.000 0.00 0.00 0.00 1.63
3207 3517 0.977395 GAGGGGTTGGGAGGATATCG 59.023 60.000 0.00 0.00 0.00 2.92
3208 3518 0.566176 AGGGGTTGGGAGGATATCGA 59.434 55.000 0.00 0.00 0.00 3.59
3209 3519 0.685660 GGGGTTGGGAGGATATCGAC 59.314 60.000 0.00 0.00 0.00 4.20
3210 3520 1.420430 GGGTTGGGAGGATATCGACA 58.580 55.000 0.00 0.00 0.00 4.35
3211 3521 1.070289 GGGTTGGGAGGATATCGACAC 59.930 57.143 0.00 0.00 0.00 3.67
3212 3522 1.269621 GGTTGGGAGGATATCGACACG 60.270 57.143 0.00 0.00 0.00 4.49
3213 3523 1.679680 GTTGGGAGGATATCGACACGA 59.320 52.381 0.00 0.00 41.13 4.35
3214 3524 1.315690 TGGGAGGATATCGACACGAC 58.684 55.000 0.00 0.00 39.18 4.34
3215 3525 0.597072 GGGAGGATATCGACACGACC 59.403 60.000 0.00 0.00 39.18 4.79
3216 3526 1.606903 GGAGGATATCGACACGACCT 58.393 55.000 0.00 0.00 39.18 3.85
3217 3527 1.955080 GGAGGATATCGACACGACCTT 59.045 52.381 0.00 0.00 39.18 3.50
3218 3528 2.030981 GGAGGATATCGACACGACCTTC 60.031 54.545 0.00 0.00 39.18 3.46
3219 3529 1.955080 AGGATATCGACACGACCTTCC 59.045 52.381 0.00 0.00 39.18 3.46
3220 3530 1.679680 GGATATCGACACGACCTTCCA 59.320 52.381 0.00 0.00 39.18 3.53
3221 3531 2.296471 GGATATCGACACGACCTTCCAT 59.704 50.000 0.00 0.00 39.18 3.41
3222 3532 3.566523 GATATCGACACGACCTTCCATC 58.433 50.000 0.00 0.00 39.18 3.51
3223 3533 0.100682 ATCGACACGACCTTCCATCG 59.899 55.000 0.00 0.00 45.17 3.84
3224 3534 1.516386 CGACACGACCTTCCATCGG 60.516 63.158 0.00 0.00 43.95 4.18
3225 3535 1.590147 GACACGACCTTCCATCGGT 59.410 57.895 0.00 0.00 43.95 4.69
3226 3536 0.458025 GACACGACCTTCCATCGGTC 60.458 60.000 0.00 0.00 45.88 4.79
3230 3540 3.826637 GACCTTCCATCGGTCGAAA 57.173 52.632 0.00 0.00 41.29 3.46
3231 3541 2.311124 GACCTTCCATCGGTCGAAAT 57.689 50.000 0.00 0.00 41.29 2.17
3232 3542 2.629051 GACCTTCCATCGGTCGAAATT 58.371 47.619 0.00 0.00 41.29 1.82
3233 3543 2.608090 GACCTTCCATCGGTCGAAATTC 59.392 50.000 0.00 0.00 41.29 2.17
3234 3544 1.593006 CCTTCCATCGGTCGAAATTCG 59.407 52.381 9.38 9.38 42.10 3.34
3235 3545 1.003851 TTCCATCGGTCGAAATTCGC 58.996 50.000 10.93 5.93 40.21 4.70
3236 3546 0.808453 TCCATCGGTCGAAATTCGCC 60.808 55.000 10.93 13.63 40.21 5.54
3237 3547 1.087202 CCATCGGTCGAAATTCGCCA 61.087 55.000 21.72 12.97 40.21 5.69
3238 3548 0.301687 CATCGGTCGAAATTCGCCAG 59.698 55.000 21.72 9.40 40.21 4.85
3239 3549 1.429148 ATCGGTCGAAATTCGCCAGC 61.429 55.000 21.72 11.36 40.21 4.85
3240 3550 2.399611 GGTCGAAATTCGCCAGCG 59.600 61.111 18.80 5.50 40.21 5.18
3241 3551 2.399611 GTCGAAATTCGCCAGCGG 59.600 61.111 10.93 0.00 40.21 5.52
3242 3552 3.496131 TCGAAATTCGCCAGCGGC 61.496 61.111 10.93 9.20 46.75 6.53
3270 3580 4.785453 GAGGCGAAGGTGGGGCTG 62.785 72.222 0.00 0.00 39.39 4.85
3282 3592 4.785453 GGGCTGCCGGAGAGGTTG 62.785 72.222 13.40 0.00 43.70 3.77
3283 3593 4.785453 GGCTGCCGGAGAGGTTGG 62.785 72.222 5.05 0.00 43.70 3.77
3290 3600 4.021925 GGAGAGGTTGGCGGCACT 62.022 66.667 12.92 6.46 0.00 4.40
3291 3601 2.032681 GAGAGGTTGGCGGCACTT 59.967 61.111 12.92 3.21 0.00 3.16
3292 3602 2.281761 AGAGGTTGGCGGCACTTG 60.282 61.111 12.92 0.00 0.00 3.16
3293 3603 3.365265 GAGGTTGGCGGCACTTGG 61.365 66.667 12.92 0.00 0.00 3.61
3294 3604 4.204028 AGGTTGGCGGCACTTGGT 62.204 61.111 12.92 0.00 0.00 3.67
3295 3605 3.670377 GGTTGGCGGCACTTGGTC 61.670 66.667 12.92 0.00 0.00 4.02
3314 3624 4.812476 CGGGCGCTCGATTGTCCA 62.812 66.667 29.20 0.00 0.00 4.02
3315 3625 2.892425 GGGCGCTCGATTGTCCAG 60.892 66.667 7.64 0.00 0.00 3.86
3316 3626 3.567797 GGCGCTCGATTGTCCAGC 61.568 66.667 7.64 0.00 0.00 4.85
3319 3629 3.918220 GCTCGATTGTCCAGCGCG 61.918 66.667 0.00 0.00 0.00 6.86
3320 3630 2.202610 CTCGATTGTCCAGCGCGA 60.203 61.111 12.10 0.00 0.00 5.87
3321 3631 2.202610 TCGATTGTCCAGCGCGAG 60.203 61.111 12.10 0.00 0.00 5.03
3322 3632 3.257561 CGATTGTCCAGCGCGAGG 61.258 66.667 12.10 11.64 0.00 4.63
3323 3633 2.892425 GATTGTCCAGCGCGAGGG 60.892 66.667 12.10 10.77 0.00 4.30
3324 3634 3.371097 GATTGTCCAGCGCGAGGGA 62.371 63.158 12.10 13.44 0.00 4.20
3325 3635 3.376935 ATTGTCCAGCGCGAGGGAG 62.377 63.158 17.99 0.00 32.85 4.30
3340 3650 2.888534 GAGCGGGCGCACGAAATA 60.889 61.111 39.76 0.00 44.88 1.40
3341 3651 2.435234 AGCGGGCGCACGAAATAA 60.435 55.556 39.76 0.00 44.88 1.40
3342 3652 2.022762 GCGGGCGCACGAAATAAG 59.977 61.111 39.76 4.83 41.49 1.73
3343 3653 2.022762 CGGGCGCACGAAATAAGC 59.977 61.111 31.90 0.00 35.47 3.09
3348 3658 2.647791 GCACGAAATAAGCGGCGC 60.648 61.111 26.86 26.86 0.00 6.53
3349 3659 2.349648 CACGAAATAAGCGGCGCG 60.350 61.111 27.59 12.84 0.00 6.86
3361 3671 4.759096 GGCGCGCGATGCTGTTTT 62.759 61.111 37.18 0.00 43.27 2.43
3362 3672 2.097538 GCGCGCGATGCTGTTTTA 59.902 55.556 37.18 0.00 43.27 1.52
3363 3673 2.208427 GCGCGCGATGCTGTTTTAC 61.208 57.895 37.18 6.98 43.27 2.01
3364 3674 1.419922 CGCGCGATGCTGTTTTACT 59.580 52.632 28.94 0.00 43.27 2.24
3365 3675 0.584054 CGCGCGATGCTGTTTTACTC 60.584 55.000 28.94 0.00 43.27 2.59
3366 3676 0.247695 GCGCGATGCTGTTTTACTCC 60.248 55.000 12.10 0.00 41.73 3.85
3367 3677 1.075542 CGCGATGCTGTTTTACTCCA 58.924 50.000 0.00 0.00 0.00 3.86
3368 3678 1.201921 CGCGATGCTGTTTTACTCCAC 60.202 52.381 0.00 0.00 0.00 4.02
3369 3679 1.804151 GCGATGCTGTTTTACTCCACA 59.196 47.619 0.00 0.00 0.00 4.17
3370 3680 2.412847 GCGATGCTGTTTTACTCCACAC 60.413 50.000 0.00 0.00 0.00 3.82
3371 3681 2.159841 CGATGCTGTTTTACTCCACACG 60.160 50.000 0.00 0.00 0.00 4.49
3372 3682 0.941542 TGCTGTTTTACTCCACACGC 59.058 50.000 0.00 0.00 0.00 5.34
3373 3683 1.226746 GCTGTTTTACTCCACACGCT 58.773 50.000 0.00 0.00 0.00 5.07
3374 3684 2.224090 TGCTGTTTTACTCCACACGCTA 60.224 45.455 0.00 0.00 0.00 4.26
3375 3685 2.803956 GCTGTTTTACTCCACACGCTAA 59.196 45.455 0.00 0.00 0.00 3.09
3376 3686 3.249080 GCTGTTTTACTCCACACGCTAAA 59.751 43.478 0.00 0.00 0.00 1.85
3377 3687 4.769215 CTGTTTTACTCCACACGCTAAAC 58.231 43.478 0.00 0.00 0.00 2.01
3378 3688 3.560896 TGTTTTACTCCACACGCTAAACC 59.439 43.478 0.00 0.00 0.00 3.27
3379 3689 2.460757 TTACTCCACACGCTAAACCC 57.539 50.000 0.00 0.00 0.00 4.11
3380 3690 0.244450 TACTCCACACGCTAAACCCG 59.756 55.000 0.00 0.00 0.00 5.28
3381 3691 1.005394 CTCCACACGCTAAACCCGT 60.005 57.895 0.00 0.00 39.91 5.28
3382 3692 0.601841 CTCCACACGCTAAACCCGTT 60.602 55.000 0.00 0.00 36.69 4.44
3383 3693 0.678395 TCCACACGCTAAACCCGTTA 59.322 50.000 0.00 0.00 36.69 3.18
3384 3694 1.275856 TCCACACGCTAAACCCGTTAT 59.724 47.619 0.00 0.00 36.69 1.89
3385 3695 2.495270 TCCACACGCTAAACCCGTTATA 59.505 45.455 0.00 0.00 36.69 0.98
3386 3696 2.604462 CCACACGCTAAACCCGTTATAC 59.396 50.000 0.00 0.00 36.69 1.47
3387 3697 2.604462 CACACGCTAAACCCGTTATACC 59.396 50.000 0.00 0.00 36.69 2.73
3388 3698 1.854126 CACGCTAAACCCGTTATACCG 59.146 52.381 0.00 0.00 36.69 4.02
3389 3699 0.854705 CGCTAAACCCGTTATACCGC 59.145 55.000 0.00 0.00 0.00 5.68
3390 3700 0.854705 GCTAAACCCGTTATACCGCG 59.145 55.000 0.00 0.00 0.00 6.46
3391 3701 1.535860 GCTAAACCCGTTATACCGCGA 60.536 52.381 8.23 0.00 0.00 5.87
3392 3702 2.388121 CTAAACCCGTTATACCGCGAG 58.612 52.381 8.23 0.00 0.00 5.03
3393 3703 0.807275 AAACCCGTTATACCGCGAGC 60.807 55.000 8.23 0.00 0.00 5.03
3394 3704 2.728383 CCCGTTATACCGCGAGCG 60.728 66.667 8.23 10.86 39.44 5.03
3395 3705 2.025156 CCGTTATACCGCGAGCGT 59.975 61.111 8.23 0.00 37.81 5.07
3396 3706 2.290789 CCGTTATACCGCGAGCGTG 61.291 63.158 8.23 10.11 37.81 5.34
3397 3707 1.297819 CGTTATACCGCGAGCGTGA 60.298 57.895 8.23 3.94 37.81 4.35
3398 3708 0.659417 CGTTATACCGCGAGCGTGAT 60.659 55.000 8.23 10.93 37.81 3.06
3399 3709 1.484356 GTTATACCGCGAGCGTGATT 58.516 50.000 8.23 1.27 37.81 2.57
3400 3710 2.653890 GTTATACCGCGAGCGTGATTA 58.346 47.619 8.23 2.75 37.81 1.75
3401 3711 3.240069 GTTATACCGCGAGCGTGATTAT 58.760 45.455 8.23 9.33 37.81 1.28
3402 3712 2.433868 ATACCGCGAGCGTGATTATT 57.566 45.000 8.23 0.00 37.81 1.40
3403 3713 1.483316 TACCGCGAGCGTGATTATTG 58.517 50.000 8.23 0.91 37.81 1.90
3404 3714 1.083401 CCGCGAGCGTGATTATTGC 60.083 57.895 8.23 0.00 37.81 3.56
3405 3715 1.435488 CGCGAGCGTGATTATTGCG 60.435 57.895 0.00 0.00 40.14 4.85
3406 3716 1.636340 GCGAGCGTGATTATTGCGT 59.364 52.632 0.00 0.00 0.00 5.24
3407 3717 0.651610 GCGAGCGTGATTATTGCGTG 60.652 55.000 0.00 0.00 0.00 5.34
3408 3718 0.043053 CGAGCGTGATTATTGCGTGG 60.043 55.000 0.00 0.00 0.00 4.94
3409 3719 0.316196 GAGCGTGATTATTGCGTGGC 60.316 55.000 0.00 0.00 0.00 5.01
3410 3720 0.744414 AGCGTGATTATTGCGTGGCT 60.744 50.000 0.00 0.00 0.00 4.75
3411 3721 0.589729 GCGTGATTATTGCGTGGCTG 60.590 55.000 0.00 0.00 0.00 4.85
3412 3722 0.589729 CGTGATTATTGCGTGGCTGC 60.590 55.000 0.00 0.00 0.00 5.25
3413 3723 0.734889 GTGATTATTGCGTGGCTGCT 59.265 50.000 0.00 0.00 35.36 4.24
3414 3724 0.734309 TGATTATTGCGTGGCTGCTG 59.266 50.000 0.00 0.00 35.36 4.41
3415 3725 0.029834 GATTATTGCGTGGCTGCTGG 59.970 55.000 0.00 0.00 35.36 4.85
3416 3726 0.394216 ATTATTGCGTGGCTGCTGGA 60.394 50.000 0.00 0.00 35.36 3.86
3417 3727 1.305219 TTATTGCGTGGCTGCTGGAC 61.305 55.000 0.00 0.00 35.36 4.02
3426 3736 4.351054 CTGCTGGACCGCCCCTTT 62.351 66.667 5.97 0.00 0.00 3.11
3427 3737 4.344865 TGCTGGACCGCCCCTTTC 62.345 66.667 5.97 0.00 0.00 2.62
3435 3745 4.692475 CGCCCCTTTCGGTTCCGT 62.692 66.667 11.04 0.00 0.00 4.69
3436 3746 3.053896 GCCCCTTTCGGTTCCGTG 61.054 66.667 11.04 3.52 0.00 4.94
3437 3747 3.053896 CCCCTTTCGGTTCCGTGC 61.054 66.667 11.04 0.00 0.00 5.34
3438 3748 2.281208 CCCTTTCGGTTCCGTGCA 60.281 61.111 11.04 0.00 0.00 4.57
3439 3749 2.613506 CCCTTTCGGTTCCGTGCAC 61.614 63.158 6.82 6.82 0.00 4.57
3440 3750 1.890041 CCTTTCGGTTCCGTGCACA 60.890 57.895 18.64 0.00 0.00 4.57
3441 3751 1.278637 CTTTCGGTTCCGTGCACAC 59.721 57.895 18.64 7.49 0.00 3.82
3442 3752 1.433053 CTTTCGGTTCCGTGCACACA 61.433 55.000 18.64 0.00 0.00 3.72
3443 3753 1.025113 TTTCGGTTCCGTGCACACAA 61.025 50.000 18.64 5.45 0.00 3.33
3444 3754 1.025113 TTCGGTTCCGTGCACACAAA 61.025 50.000 18.64 4.51 0.00 2.83
3445 3755 1.025113 TCGGTTCCGTGCACACAAAA 61.025 50.000 18.64 1.83 0.00 2.44
3446 3756 0.179161 CGGTTCCGTGCACACAAAAA 60.179 50.000 18.64 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.419324 ACCTCGTCTTCGTGTGACTATC 59.581 50.000 0.00 0.00 38.33 2.08
111 115 2.105128 GATCCGGACTGACGCCTG 59.895 66.667 6.12 0.00 0.00 4.85
148 165 2.095718 GCCAAACTCACACCGATTCTTC 60.096 50.000 0.00 0.00 0.00 2.87
155 172 2.639286 GCTGCCAAACTCACACCG 59.361 61.111 0.00 0.00 0.00 4.94
174 191 1.485838 GCCACGATGATGTCTGCTCG 61.486 60.000 0.00 0.00 37.17 5.03
186 203 1.683917 GACAGACTCATAGGCCACGAT 59.316 52.381 5.01 0.00 0.00 3.73
187 204 1.103803 GACAGACTCATAGGCCACGA 58.896 55.000 5.01 0.00 0.00 4.35
188 205 1.066303 GAGACAGACTCATAGGCCACG 59.934 57.143 5.01 0.00 44.36 4.94
189 206 2.880963 GAGACAGACTCATAGGCCAC 57.119 55.000 5.01 0.00 44.36 5.01
219 241 1.202627 AGAGGAAAGATCATCGCCTGC 60.203 52.381 1.97 0.00 41.19 4.85
235 257 2.941720 GCTCTATTGTCCAAAGCAGAGG 59.058 50.000 13.79 0.00 33.21 3.69
239 261 2.040278 ACAGGCTCTATTGTCCAAAGCA 59.960 45.455 4.99 0.00 34.65 3.91
258 280 6.038985 TCACGAAAATCAAAATGCTTCAACA 58.961 32.000 0.00 0.00 0.00 3.33
276 298 2.804697 TGAACGGTCATCTTCACGAA 57.195 45.000 0.00 0.00 0.00 3.85
280 302 3.145286 TGCAATTGAACGGTCATCTTCA 58.855 40.909 2.76 0.00 32.48 3.02
319 341 4.614946 ACAAACGGTCACTGAACTACTAC 58.385 43.478 0.00 0.00 0.00 2.73
322 344 5.224888 TGATACAAACGGTCACTGAACTAC 58.775 41.667 0.00 0.00 0.00 2.73
323 345 5.456548 TGATACAAACGGTCACTGAACTA 57.543 39.130 0.00 0.00 0.00 2.24
324 346 4.330944 TGATACAAACGGTCACTGAACT 57.669 40.909 0.00 0.00 0.00 3.01
325 347 5.607119 AATGATACAAACGGTCACTGAAC 57.393 39.130 0.00 0.00 0.00 3.18
326 348 6.627395 AAAATGATACAAACGGTCACTGAA 57.373 33.333 0.00 0.00 0.00 3.02
327 349 6.261158 TGAAAAATGATACAAACGGTCACTGA 59.739 34.615 0.00 0.00 0.00 3.41
328 350 6.434596 TGAAAAATGATACAAACGGTCACTG 58.565 36.000 0.00 0.00 0.00 3.66
329 351 6.627395 TGAAAAATGATACAAACGGTCACT 57.373 33.333 0.00 0.00 0.00 3.41
330 352 6.915843 AGTTGAAAAATGATACAAACGGTCAC 59.084 34.615 0.00 0.00 0.00 3.67
331 353 7.033530 AGTTGAAAAATGATACAAACGGTCA 57.966 32.000 0.00 0.00 0.00 4.02
332 354 7.924103 AAGTTGAAAAATGATACAAACGGTC 57.076 32.000 0.00 0.00 0.00 4.79
333 355 7.762159 ACAAAGTTGAAAAATGATACAAACGGT 59.238 29.630 0.00 0.00 0.00 4.83
375 397 7.934665 ACCTACAATATATGAATTTGCGTGGTA 59.065 33.333 0.00 0.00 0.00 3.25
434 456 4.022329 TGACGAGACAATGCACTTCTCTTA 60.022 41.667 15.49 3.50 34.72 2.10
491 513 1.448540 CTTGCTGCCACCCTACTCG 60.449 63.158 0.00 0.00 0.00 4.18
506 528 0.030638 CACACGGGGCAAGTTTCTTG 59.969 55.000 5.28 5.28 0.00 3.02
515 537 0.179004 ATTTCAGTTCACACGGGGCA 60.179 50.000 0.00 0.00 0.00 5.36
521 543 6.564873 GCAGTAGAGTCAATTTCAGTTCACAC 60.565 42.308 0.00 0.00 0.00 3.82
524 546 5.610398 TGCAGTAGAGTCAATTTCAGTTCA 58.390 37.500 0.00 0.00 0.00 3.18
543 565 3.944055 ACCAGAGTAGTAGTGTTGCAG 57.056 47.619 0.00 0.00 0.00 4.41
554 576 5.121811 AGCAATGCTTCATTACCAGAGTAG 58.878 41.667 0.00 0.00 33.89 2.57
634 668 9.270576 CTATCTCAAAATTTCTGAAATCGTGTG 57.729 33.333 15.43 15.24 0.00 3.82
645 679 8.489489 TGTCTATCCAGCTATCTCAAAATTTCT 58.511 33.333 0.00 0.00 0.00 2.52
650 684 5.663106 ACCTGTCTATCCAGCTATCTCAAAA 59.337 40.000 0.00 0.00 0.00 2.44
695 729 6.015504 GTCACATACAGCGTCTTTAAATGTG 58.984 40.000 6.27 6.27 42.43 3.21
698 732 6.649141 TCTTGTCACATACAGCGTCTTTAAAT 59.351 34.615 0.00 0.00 39.87 1.40
699 733 5.986741 TCTTGTCACATACAGCGTCTTTAAA 59.013 36.000 0.00 0.00 39.87 1.52
702 736 3.990092 TCTTGTCACATACAGCGTCTTT 58.010 40.909 0.00 0.00 39.87 2.52
831 882 9.481340 GATATATGCGGAATCAATGCTATTCTA 57.519 33.333 0.00 0.00 34.43 2.10
836 887 5.988287 TGGATATATGCGGAATCAATGCTA 58.012 37.500 0.00 0.00 0.00 3.49
864 915 9.769677 TCTGTATCCCTTTGTGCTATACTATAT 57.230 33.333 0.00 0.00 0.00 0.86
865 916 9.021807 GTCTGTATCCCTTTGTGCTATACTATA 57.978 37.037 0.00 0.00 0.00 1.31
866 917 7.309255 CGTCTGTATCCCTTTGTGCTATACTAT 60.309 40.741 0.00 0.00 0.00 2.12
929 1009 0.530870 GTGGAAGTCTATGGCGAGGC 60.531 60.000 0.00 0.00 0.00 4.70
934 1014 1.473434 CGAAGGGTGGAAGTCTATGGC 60.473 57.143 0.00 0.00 0.00 4.40
954 1034 0.595095 CAAGCTGGGTTCTGACTTGC 59.405 55.000 0.00 0.00 32.20 4.01
969 1049 0.732538 GCCGTGTATGGTTTGCAAGC 60.733 55.000 4.46 4.46 0.00 4.01
1165 1248 2.509336 CATGGTGACGCGGAGGTC 60.509 66.667 12.47 0.00 37.45 3.85
1174 1257 2.380410 GCGTGACGACCATGGTGAC 61.380 63.158 25.52 14.94 32.41 3.67
1371 1454 2.892425 GGGAGCGACGCCATGAAG 60.892 66.667 17.79 0.00 0.00 3.02
1572 1680 2.514013 CGGCGTGATCCTTACGTGC 61.514 63.158 0.00 0.00 43.09 5.34
1642 1750 3.284617 TGTCATCGATAAGGAACCGAGA 58.715 45.455 0.00 0.00 35.70 4.04
1737 1845 2.428890 CTGGTAGAACGAGATGAAGGCT 59.571 50.000 0.00 0.00 0.00 4.58
1854 1962 2.583593 GCCATCTCGTCGAGCCAC 60.584 66.667 17.61 3.27 0.00 5.01
2037 2145 4.570663 CACCCGCGGACGATCCTC 62.571 72.222 30.73 0.00 43.93 3.71
2283 2400 2.107953 GCGTCCATCAGCCTCCTC 59.892 66.667 0.00 0.00 0.00 3.71
2391 2508 3.406361 AGCTTCAGCAACGCGACG 61.406 61.111 15.93 3.67 45.16 5.12
2421 2538 1.901085 GTCACAGTAGCTCCCCTGG 59.099 63.158 11.36 0.00 32.90 4.45
2445 2562 3.486263 CGATCCTTGTTCGCCACC 58.514 61.111 0.00 0.00 0.00 4.61
2455 2572 8.908786 TGATTTGATTATTAAGAGCGATCCTT 57.091 30.769 0.00 0.00 0.00 3.36
2456 2573 8.908786 TTGATTTGATTATTAAGAGCGATCCT 57.091 30.769 0.00 0.00 0.00 3.24
2458 2575 9.470490 CGATTGATTTGATTATTAAGAGCGATC 57.530 33.333 0.00 0.00 0.00 3.69
2459 2576 8.446273 CCGATTGATTTGATTATTAAGAGCGAT 58.554 33.333 0.00 0.00 0.00 4.58
2460 2577 7.571244 GCCGATTGATTTGATTATTAAGAGCGA 60.571 37.037 0.00 0.00 0.00 4.93
2461 2578 6.521133 GCCGATTGATTTGATTATTAAGAGCG 59.479 38.462 0.00 0.00 0.00 5.03
2462 2579 6.521133 CGCCGATTGATTTGATTATTAAGAGC 59.479 38.462 0.00 0.00 0.00 4.09
2463 2580 7.017645 CCGCCGATTGATTTGATTATTAAGAG 58.982 38.462 0.00 0.00 0.00 2.85
2464 2581 6.567701 GCCGCCGATTGATTTGATTATTAAGA 60.568 38.462 0.00 0.00 0.00 2.10
2465 2582 5.569059 GCCGCCGATTGATTTGATTATTAAG 59.431 40.000 0.00 0.00 0.00 1.85
2466 2583 5.457140 GCCGCCGATTGATTTGATTATTAA 58.543 37.500 0.00 0.00 0.00 1.40
2467 2584 4.377943 CGCCGCCGATTGATTTGATTATTA 60.378 41.667 0.00 0.00 36.29 0.98
2468 2585 3.609175 CGCCGCCGATTGATTTGATTATT 60.609 43.478 0.00 0.00 36.29 1.40
2520 2638 4.327680 ACACAGGAGCTGAGGTTATTTTC 58.672 43.478 0.00 0.00 35.18 2.29
2529 2647 0.734253 GCACGTACACAGGAGCTGAG 60.734 60.000 0.00 0.00 35.18 3.35
2620 2929 2.434185 GCCCGATGAAGTGCACGA 60.434 61.111 12.01 0.00 0.00 4.35
2634 2943 1.885163 AAGCAAATGAGCAGCAGCCC 61.885 55.000 0.00 0.00 43.56 5.19
2670 2980 6.730960 AAAGTGTCTTTAGTCGAACACAAA 57.269 33.333 15.91 1.36 0.00 2.83
2671 2981 7.830940 TTAAAGTGTCTTTAGTCGAACACAA 57.169 32.000 15.91 1.97 0.00 3.33
2672 2982 7.042321 CCATTAAAGTGTCTTTAGTCGAACACA 60.042 37.037 15.91 0.00 0.00 3.72
2727 3037 5.413213 TGCACACCAGTACAAAACCATATAC 59.587 40.000 0.00 0.00 0.00 1.47
2728 3038 5.561679 TGCACACCAGTACAAAACCATATA 58.438 37.500 0.00 0.00 0.00 0.86
2729 3039 4.402829 TGCACACCAGTACAAAACCATAT 58.597 39.130 0.00 0.00 0.00 1.78
2730 3040 3.821748 TGCACACCAGTACAAAACCATA 58.178 40.909 0.00 0.00 0.00 2.74
2731 3041 2.660572 TGCACACCAGTACAAAACCAT 58.339 42.857 0.00 0.00 0.00 3.55
2733 3043 2.360801 ACATGCACACCAGTACAAAACC 59.639 45.455 0.00 0.00 0.00 3.27
2734 3044 3.371168 CACATGCACACCAGTACAAAAC 58.629 45.455 0.00 0.00 0.00 2.43
2735 3045 2.360483 CCACATGCACACCAGTACAAAA 59.640 45.455 0.00 0.00 0.00 2.44
2739 3049 1.266718 CAACCACATGCACACCAGTAC 59.733 52.381 0.00 0.00 0.00 2.73
2740 3050 1.133945 ACAACCACATGCACACCAGTA 60.134 47.619 0.00 0.00 0.00 2.74
2741 3051 0.395586 ACAACCACATGCACACCAGT 60.396 50.000 0.00 0.00 0.00 4.00
2742 3052 0.031043 CACAACCACATGCACACCAG 59.969 55.000 0.00 0.00 0.00 4.00
2743 3053 0.394899 TCACAACCACATGCACACCA 60.395 50.000 0.00 0.00 0.00 4.17
2744 3054 0.311790 CTCACAACCACATGCACACC 59.688 55.000 0.00 0.00 0.00 4.16
2745 3055 0.311790 CCTCACAACCACATGCACAC 59.688 55.000 0.00 0.00 0.00 3.82
2746 3056 0.106769 ACCTCACAACCACATGCACA 60.107 50.000 0.00 0.00 0.00 4.57
2747 3057 0.593128 GACCTCACAACCACATGCAC 59.407 55.000 0.00 0.00 0.00 4.57
2748 3058 0.473755 AGACCTCACAACCACATGCA 59.526 50.000 0.00 0.00 0.00 3.96
2749 3059 0.877071 CAGACCTCACAACCACATGC 59.123 55.000 0.00 0.00 0.00 4.06
2750 3060 2.549064 TCAGACCTCACAACCACATG 57.451 50.000 0.00 0.00 0.00 3.21
2751 3061 2.639347 TCATCAGACCTCACAACCACAT 59.361 45.455 0.00 0.00 0.00 3.21
2752 3062 2.046292 TCATCAGACCTCACAACCACA 58.954 47.619 0.00 0.00 0.00 4.17
2753 3063 2.839486 TCATCAGACCTCACAACCAC 57.161 50.000 0.00 0.00 0.00 4.16
2754 3064 4.371624 AAATCATCAGACCTCACAACCA 57.628 40.909 0.00 0.00 0.00 3.67
2755 3065 6.352516 AGATAAATCATCAGACCTCACAACC 58.647 40.000 0.00 0.00 35.96 3.77
2756 3066 7.856145 AAGATAAATCATCAGACCTCACAAC 57.144 36.000 0.00 0.00 35.96 3.32
2760 3070 9.060347 GCAATAAAGATAAATCATCAGACCTCA 57.940 33.333 0.00 0.00 35.96 3.86
2761 3071 8.226448 CGCAATAAAGATAAATCATCAGACCTC 58.774 37.037 0.00 0.00 35.96 3.85
2762 3072 7.308229 GCGCAATAAAGATAAATCATCAGACCT 60.308 37.037 0.30 0.00 35.96 3.85
2763 3073 6.798959 GCGCAATAAAGATAAATCATCAGACC 59.201 38.462 0.30 0.00 35.96 3.85
2764 3074 6.798959 GGCGCAATAAAGATAAATCATCAGAC 59.201 38.462 10.83 0.00 35.96 3.51
2765 3075 6.486320 TGGCGCAATAAAGATAAATCATCAGA 59.514 34.615 10.83 0.00 35.96 3.27
2766 3076 6.671190 TGGCGCAATAAAGATAAATCATCAG 58.329 36.000 10.83 0.00 35.96 2.90
2767 3077 6.631971 TGGCGCAATAAAGATAAATCATCA 57.368 33.333 10.83 0.00 35.96 3.07
2768 3078 7.362662 TCTTGGCGCAATAAAGATAAATCATC 58.637 34.615 10.83 0.00 0.00 2.92
2769 3079 7.275888 TCTTGGCGCAATAAAGATAAATCAT 57.724 32.000 10.83 0.00 0.00 2.45
2770 3080 6.691754 TCTTGGCGCAATAAAGATAAATCA 57.308 33.333 10.83 0.00 0.00 2.57
2771 3081 7.985634 TTTCTTGGCGCAATAAAGATAAATC 57.014 32.000 10.83 0.00 30.41 2.17
2772 3082 7.492344 CCTTTTCTTGGCGCAATAAAGATAAAT 59.508 33.333 10.83 0.00 32.07 1.40
2773 3083 6.811170 CCTTTTCTTGGCGCAATAAAGATAAA 59.189 34.615 10.83 12.99 32.07 1.40
2774 3084 6.071616 ACCTTTTCTTGGCGCAATAAAGATAA 60.072 34.615 10.83 12.17 32.07 1.75
2775 3085 5.417580 ACCTTTTCTTGGCGCAATAAAGATA 59.582 36.000 10.83 5.18 32.07 1.98
2776 3086 4.220602 ACCTTTTCTTGGCGCAATAAAGAT 59.779 37.500 10.83 0.00 32.07 2.40
2777 3087 3.572255 ACCTTTTCTTGGCGCAATAAAGA 59.428 39.130 10.83 9.81 32.07 2.52
2778 3088 3.913089 ACCTTTTCTTGGCGCAATAAAG 58.087 40.909 10.83 10.75 31.15 1.85
2779 3089 5.455056 TTACCTTTTCTTGGCGCAATAAA 57.545 34.783 10.83 4.52 0.00 1.40
2780 3090 5.652994 ATTACCTTTTCTTGGCGCAATAA 57.347 34.783 10.83 0.00 0.00 1.40
2781 3091 6.544197 TGATATTACCTTTTCTTGGCGCAATA 59.456 34.615 10.83 0.00 0.00 1.90
2782 3092 5.359576 TGATATTACCTTTTCTTGGCGCAAT 59.640 36.000 10.83 0.00 0.00 3.56
2783 3093 4.702612 TGATATTACCTTTTCTTGGCGCAA 59.297 37.500 10.83 0.00 0.00 4.85
2784 3094 4.265893 TGATATTACCTTTTCTTGGCGCA 58.734 39.130 10.83 0.00 0.00 6.09
2785 3095 4.893424 TGATATTACCTTTTCTTGGCGC 57.107 40.909 0.00 0.00 0.00 6.53
2786 3096 6.677781 TCTTGATATTACCTTTTCTTGGCG 57.322 37.500 0.00 0.00 0.00 5.69
2829 3139 8.117813 TCCGCTCTGGAAAATATTTAGTTTTT 57.882 30.769 0.01 0.00 46.38 1.94
2830 3140 7.696992 TCCGCTCTGGAAAATATTTAGTTTT 57.303 32.000 0.01 0.00 46.38 2.43
2845 3155 1.002366 CACGAAAATCTCCGCTCTGG 58.998 55.000 0.00 0.00 40.09 3.86
2846 3156 1.714794 ACACGAAAATCTCCGCTCTG 58.285 50.000 0.00 0.00 0.00 3.35
2847 3157 3.802948 ATACACGAAAATCTCCGCTCT 57.197 42.857 0.00 0.00 0.00 4.09
2848 3158 4.113354 AGAATACACGAAAATCTCCGCTC 58.887 43.478 0.00 0.00 0.00 5.03
2849 3159 4.124851 AGAATACACGAAAATCTCCGCT 57.875 40.909 0.00 0.00 0.00 5.52
2850 3160 5.747197 TCTTAGAATACACGAAAATCTCCGC 59.253 40.000 0.00 0.00 0.00 5.54
2851 3161 6.074782 GCTCTTAGAATACACGAAAATCTCCG 60.075 42.308 0.00 0.00 0.00 4.63
2852 3162 6.757010 TGCTCTTAGAATACACGAAAATCTCC 59.243 38.462 0.00 0.00 0.00 3.71
2853 3163 7.757097 TGCTCTTAGAATACACGAAAATCTC 57.243 36.000 0.00 0.00 0.00 2.75
2854 3164 8.200792 AGATGCTCTTAGAATACACGAAAATCT 58.799 33.333 0.00 0.00 0.00 2.40
2855 3165 8.359060 AGATGCTCTTAGAATACACGAAAATC 57.641 34.615 0.00 0.00 0.00 2.17
2856 3166 7.439655 GGAGATGCTCTTAGAATACACGAAAAT 59.560 37.037 0.00 0.00 0.00 1.82
2857 3167 6.757010 GGAGATGCTCTTAGAATACACGAAAA 59.243 38.462 0.00 0.00 0.00 2.29
2858 3168 6.127451 TGGAGATGCTCTTAGAATACACGAAA 60.127 38.462 0.00 0.00 0.00 3.46
2859 3169 5.359860 TGGAGATGCTCTTAGAATACACGAA 59.640 40.000 0.00 0.00 0.00 3.85
2860 3170 4.887655 TGGAGATGCTCTTAGAATACACGA 59.112 41.667 0.00 0.00 0.00 4.35
2861 3171 5.188327 TGGAGATGCTCTTAGAATACACG 57.812 43.478 0.00 0.00 0.00 4.49
2862 3172 7.849804 TTTTGGAGATGCTCTTAGAATACAC 57.150 36.000 0.00 0.00 0.00 2.90
2863 3173 9.770097 CTATTTTGGAGATGCTCTTAGAATACA 57.230 33.333 0.00 0.00 0.00 2.29
2864 3174 9.771534 ACTATTTTGGAGATGCTCTTAGAATAC 57.228 33.333 0.00 0.00 0.00 1.89
2866 3176 9.692325 AAACTATTTTGGAGATGCTCTTAGAAT 57.308 29.630 0.00 0.00 0.00 2.40
2867 3177 9.520515 AAAACTATTTTGGAGATGCTCTTAGAA 57.479 29.630 0.00 0.00 0.00 2.10
2868 3178 9.520515 AAAAACTATTTTGGAGATGCTCTTAGA 57.479 29.630 0.00 0.00 37.36 2.10
2905 3215 4.906792 CTAGAGCCAGCGCCCTGC 62.907 72.222 2.29 4.17 46.98 4.85
2906 3216 4.906792 GCTAGAGCCAGCGCCCTG 62.907 72.222 2.29 0.00 38.85 4.45
2922 3232 1.945662 CATATTTTGCAGCGGCCGC 60.946 57.895 42.34 42.34 40.13 6.53
2923 3233 1.299316 CCATATTTTGCAGCGGCCG 60.299 57.895 24.05 24.05 40.13 6.13
2924 3234 1.592400 GCCATATTTTGCAGCGGCC 60.592 57.895 6.32 0.00 40.13 6.13
2925 3235 1.945662 CGCCATATTTTGCAGCGGC 60.946 57.895 0.31 0.31 42.93 6.53
2926 3236 1.945662 GCGCCATATTTTGCAGCGG 60.946 57.895 14.81 0.00 46.50 5.52
2928 3238 2.579574 GCGCGCCATATTTTGCAGC 61.580 57.895 23.24 0.00 0.00 5.25
2929 3239 2.287965 CGCGCGCCATATTTTGCAG 61.288 57.895 27.72 2.11 0.00 4.41
2930 3240 2.277820 CGCGCGCCATATTTTGCA 60.278 55.556 27.72 0.00 0.00 4.08
2931 3241 3.681318 GCGCGCGCCATATTTTGC 61.681 61.111 42.83 16.79 34.56 3.68
2932 3242 3.378042 CGCGCGCGCCATATTTTG 61.378 61.111 44.64 26.55 37.98 2.44
2933 3243 3.506312 CTCGCGCGCGCCATATTTT 62.506 57.895 45.41 0.00 39.59 1.82
2934 3244 4.000557 CTCGCGCGCGCCATATTT 62.001 61.111 45.41 0.00 39.59 1.40
2935 3245 3.834447 TACTCGCGCGCGCCATATT 62.834 57.895 45.41 27.14 39.59 1.28
2936 3246 4.337060 TACTCGCGCGCGCCATAT 62.337 61.111 45.41 30.22 39.59 1.78
2937 3247 4.975242 CTACTCGCGCGCGCCATA 62.975 66.667 45.41 32.57 39.59 2.74
2943 3253 3.611792 CTGAAGCTACTCGCGCGC 61.612 66.667 27.95 23.91 45.59 6.86
2944 3254 3.611792 GCTGAAGCTACTCGCGCG 61.612 66.667 26.76 26.76 45.59 6.86
2945 3255 2.507102 TGCTGAAGCTACTCGCGC 60.507 61.111 0.00 0.00 45.59 6.86
2946 3256 1.875813 CCTGCTGAAGCTACTCGCG 60.876 63.158 0.00 0.00 45.59 5.87
2947 3257 2.170434 GCCTGCTGAAGCTACTCGC 61.170 63.158 3.61 0.00 42.66 5.03
2948 3258 1.080995 GTGCCTGCTGAAGCTACTCG 61.081 60.000 3.61 0.00 42.66 4.18
2949 3259 1.080995 CGTGCCTGCTGAAGCTACTC 61.081 60.000 3.61 0.00 42.66 2.59
2950 3260 1.079543 CGTGCCTGCTGAAGCTACT 60.080 57.895 3.61 0.00 42.66 2.57
2951 3261 2.744768 GCGTGCCTGCTGAAGCTAC 61.745 63.158 3.61 0.00 42.66 3.58
2952 3262 1.604147 TAGCGTGCCTGCTGAAGCTA 61.604 55.000 9.82 0.00 46.70 3.32
2953 3263 2.454832 TTAGCGTGCCTGCTGAAGCT 62.455 55.000 9.82 0.00 46.70 3.74
2954 3264 1.577328 TTTAGCGTGCCTGCTGAAGC 61.577 55.000 9.82 0.00 46.70 3.86
2955 3265 1.089920 ATTTAGCGTGCCTGCTGAAG 58.910 50.000 9.82 0.00 46.70 3.02
2956 3266 1.533625 AATTTAGCGTGCCTGCTGAA 58.466 45.000 9.82 8.28 46.70 3.02
2957 3267 1.468520 GAAATTTAGCGTGCCTGCTGA 59.531 47.619 9.82 0.00 46.70 4.26
2958 3268 1.468054 GGAAATTTAGCGTGCCTGCTG 60.468 52.381 9.82 0.00 46.70 4.41
2960 3270 0.525761 TGGAAATTTAGCGTGCCTGC 59.474 50.000 0.00 0.00 0.00 4.85
2961 3271 1.468054 GCTGGAAATTTAGCGTGCCTG 60.468 52.381 0.00 0.00 0.00 4.85
2962 3272 0.811281 GCTGGAAATTTAGCGTGCCT 59.189 50.000 0.00 0.00 0.00 4.75
2963 3273 3.329114 GCTGGAAATTTAGCGTGCC 57.671 52.632 0.00 0.00 0.00 5.01
2968 3278 1.934476 CGCGCGCTGGAAATTTAGC 60.934 57.895 30.48 3.28 36.60 3.09
2969 3279 0.315382 CTCGCGCGCTGGAAATTTAG 60.315 55.000 30.48 9.38 0.00 1.85
2970 3280 1.713246 CTCGCGCGCTGGAAATTTA 59.287 52.632 30.48 1.98 0.00 1.40
2971 3281 2.480555 CTCGCGCGCTGGAAATTT 59.519 55.556 30.48 0.00 0.00 1.82
2972 3282 4.166011 GCTCGCGCGCTGGAAATT 62.166 61.111 30.48 0.00 0.00 1.82
2984 3294 3.782244 CAAGTGTCGGCTGCTCGC 61.782 66.667 0.00 0.00 38.13 5.03
2985 3295 3.782244 GCAAGTGTCGGCTGCTCG 61.782 66.667 0.00 1.60 0.00 5.03
2986 3296 1.785041 TTTGCAAGTGTCGGCTGCTC 61.785 55.000 0.00 0.00 0.00 4.26
2987 3297 1.174712 ATTTGCAAGTGTCGGCTGCT 61.175 50.000 0.00 0.00 0.00 4.24
2988 3298 0.521291 TATTTGCAAGTGTCGGCTGC 59.479 50.000 4.47 0.00 0.00 5.25
2989 3299 1.466360 GCTATTTGCAAGTGTCGGCTG 60.466 52.381 4.47 0.00 42.31 4.85
2990 3300 0.804989 GCTATTTGCAAGTGTCGGCT 59.195 50.000 4.47 0.00 42.31 5.52
2991 3301 3.312709 GCTATTTGCAAGTGTCGGC 57.687 52.632 4.47 0.67 42.31 5.54
3001 3311 6.979817 TGGACATGTAAAATCATGCTATTTGC 59.020 34.615 0.00 0.00 46.15 3.68
3002 3312 9.537192 AATGGACATGTAAAATCATGCTATTTG 57.463 29.630 0.00 0.00 46.15 2.32
3004 3314 9.537192 CAAATGGACATGTAAAATCATGCTATT 57.463 29.630 0.00 6.69 46.15 1.73
3005 3315 8.916062 TCAAATGGACATGTAAAATCATGCTAT 58.084 29.630 0.00 1.96 46.15 2.97
3006 3316 8.190122 GTCAAATGGACATGTAAAATCATGCTA 58.810 33.333 0.00 0.00 46.15 3.49
3007 3317 7.037438 GTCAAATGGACATGTAAAATCATGCT 58.963 34.615 0.00 0.00 46.15 3.79
3008 3318 7.225523 GTCAAATGGACATGTAAAATCATGC 57.774 36.000 0.00 1.13 46.15 4.06
3023 3333 8.968969 TGAAACATCATCATATTGTCAAATGGA 58.031 29.630 0.00 0.00 0.00 3.41
3024 3334 9.589111 TTGAAACATCATCATATTGTCAAATGG 57.411 29.630 0.00 0.00 0.00 3.16
3057 3367 9.995003 TCCAACTCTTATTTTTGCATATTTGTT 57.005 25.926 0.00 0.00 0.00 2.83
3058 3368 9.643693 CTCCAACTCTTATTTTTGCATATTTGT 57.356 29.630 0.00 0.00 0.00 2.83
3059 3369 8.598075 GCTCCAACTCTTATTTTTGCATATTTG 58.402 33.333 0.00 0.00 0.00 2.32
3060 3370 8.313292 TGCTCCAACTCTTATTTTTGCATATTT 58.687 29.630 0.00 0.00 0.00 1.40
3061 3371 7.839907 TGCTCCAACTCTTATTTTTGCATATT 58.160 30.769 0.00 0.00 0.00 1.28
3062 3372 7.408756 TGCTCCAACTCTTATTTTTGCATAT 57.591 32.000 0.00 0.00 0.00 1.78
3063 3373 6.832520 TGCTCCAACTCTTATTTTTGCATA 57.167 33.333 0.00 0.00 0.00 3.14
3064 3374 5.726980 TGCTCCAACTCTTATTTTTGCAT 57.273 34.783 0.00 0.00 0.00 3.96
3065 3375 5.163468 TGTTGCTCCAACTCTTATTTTTGCA 60.163 36.000 9.23 0.00 43.85 4.08
3066 3376 5.288804 TGTTGCTCCAACTCTTATTTTTGC 58.711 37.500 9.23 0.00 43.85 3.68
3067 3377 7.274250 GCTATGTTGCTCCAACTCTTATTTTTG 59.726 37.037 9.23 0.00 43.85 2.44
3068 3378 7.039784 TGCTATGTTGCTCCAACTCTTATTTTT 60.040 33.333 9.23 0.00 43.85 1.94
3069 3379 6.434028 TGCTATGTTGCTCCAACTCTTATTTT 59.566 34.615 9.23 0.00 43.85 1.82
3070 3380 5.945784 TGCTATGTTGCTCCAACTCTTATTT 59.054 36.000 9.23 0.00 43.85 1.40
3071 3381 5.500234 TGCTATGTTGCTCCAACTCTTATT 58.500 37.500 9.23 0.00 43.85 1.40
3072 3382 5.102953 TGCTATGTTGCTCCAACTCTTAT 57.897 39.130 9.23 0.00 43.85 1.73
3073 3383 4.551702 TGCTATGTTGCTCCAACTCTTA 57.448 40.909 9.23 0.00 43.85 2.10
3074 3384 3.423539 TGCTATGTTGCTCCAACTCTT 57.576 42.857 9.23 0.00 43.85 2.85
3075 3385 3.641434 ATGCTATGTTGCTCCAACTCT 57.359 42.857 9.23 0.74 43.85 3.24
3076 3386 4.446371 ACTATGCTATGTTGCTCCAACTC 58.554 43.478 9.23 0.00 43.85 3.01
3077 3387 4.494091 ACTATGCTATGTTGCTCCAACT 57.506 40.909 9.23 0.00 43.85 3.16
3078 3388 4.635765 TGAACTATGCTATGTTGCTCCAAC 59.364 41.667 1.33 1.33 43.78 3.77
3079 3389 4.842574 TGAACTATGCTATGTTGCTCCAA 58.157 39.130 0.00 0.00 0.00 3.53
3080 3390 4.486125 TGAACTATGCTATGTTGCTCCA 57.514 40.909 0.00 0.00 0.00 3.86
3081 3391 6.204359 CAATTGAACTATGCTATGTTGCTCC 58.796 40.000 0.00 0.00 0.00 4.70
3082 3392 5.684626 GCAATTGAACTATGCTATGTTGCTC 59.315 40.000 10.34 0.00 37.16 4.26
3083 3393 5.450965 GGCAATTGAACTATGCTATGTTGCT 60.451 40.000 10.34 0.00 39.33 3.91
3084 3394 4.741676 GGCAATTGAACTATGCTATGTTGC 59.258 41.667 10.34 0.00 39.94 4.17
3085 3395 4.971830 CGGCAATTGAACTATGCTATGTTG 59.028 41.667 10.34 0.00 39.94 3.33
3086 3396 4.881273 TCGGCAATTGAACTATGCTATGTT 59.119 37.500 10.34 0.00 39.94 2.71
3087 3397 4.273480 GTCGGCAATTGAACTATGCTATGT 59.727 41.667 10.34 0.00 39.94 2.29
3088 3398 4.609113 CGTCGGCAATTGAACTATGCTATG 60.609 45.833 10.34 0.00 39.94 2.23
3089 3399 3.494626 CGTCGGCAATTGAACTATGCTAT 59.505 43.478 10.34 0.00 39.94 2.97
3090 3400 2.863740 CGTCGGCAATTGAACTATGCTA 59.136 45.455 10.34 0.00 39.94 3.49
3091 3401 1.665679 CGTCGGCAATTGAACTATGCT 59.334 47.619 10.34 0.00 39.94 3.79
3092 3402 1.268032 CCGTCGGCAATTGAACTATGC 60.268 52.381 10.34 0.00 39.33 3.14
3093 3403 2.737467 CCGTCGGCAATTGAACTATG 57.263 50.000 10.34 0.00 0.00 2.23
3118 3428 4.697756 TGCGGGGTTGAGCTTCGG 62.698 66.667 0.00 0.00 0.00 4.30
3119 3429 2.501223 TAGTGCGGGGTTGAGCTTCG 62.501 60.000 0.00 0.00 0.00 3.79
3120 3430 0.741221 CTAGTGCGGGGTTGAGCTTC 60.741 60.000 0.00 0.00 0.00 3.86
3121 3431 1.296715 CTAGTGCGGGGTTGAGCTT 59.703 57.895 0.00 0.00 0.00 3.74
3122 3432 2.660064 CCTAGTGCGGGGTTGAGCT 61.660 63.158 0.00 0.00 0.00 4.09
3123 3433 2.125106 CCTAGTGCGGGGTTGAGC 60.125 66.667 0.00 0.00 0.00 4.26
3124 3434 2.584608 CCCTAGTGCGGGGTTGAG 59.415 66.667 0.00 0.00 40.75 3.02
3133 3443 3.799755 CGCCGCAAACCCTAGTGC 61.800 66.667 0.00 0.00 37.40 4.40
3134 3444 2.510064 TACCGCCGCAAACCCTAGTG 62.510 60.000 0.00 0.00 0.00 2.74
3135 3445 2.234913 CTACCGCCGCAAACCCTAGT 62.235 60.000 0.00 0.00 0.00 2.57
3136 3446 1.520787 CTACCGCCGCAAACCCTAG 60.521 63.158 0.00 0.00 0.00 3.02
3137 3447 2.580276 CTACCGCCGCAAACCCTA 59.420 61.111 0.00 0.00 0.00 3.53
3149 3459 3.118454 CTGTTGCCACCGCTACCG 61.118 66.667 0.00 0.00 39.64 4.02
3150 3460 3.431725 GCTGTTGCCACCGCTACC 61.432 66.667 0.00 0.00 39.64 3.18
3151 3461 3.788766 CGCTGTTGCCACCGCTAC 61.789 66.667 2.96 0.00 40.62 3.58
3157 3467 3.628646 ATCCCTCCGCTGTTGCCAC 62.629 63.158 0.00 0.00 35.36 5.01
3158 3468 3.329542 GATCCCTCCGCTGTTGCCA 62.330 63.158 0.00 0.00 35.36 4.92
3159 3469 2.514824 GATCCCTCCGCTGTTGCC 60.515 66.667 0.00 0.00 35.36 4.52
3160 3470 2.892425 CGATCCCTCCGCTGTTGC 60.892 66.667 0.00 0.00 0.00 4.17
3168 3478 2.836360 TACACCCGCGATCCCTCC 60.836 66.667 8.23 0.00 0.00 4.30
3169 3479 2.728817 CTACACCCGCGATCCCTC 59.271 66.667 8.23 0.00 0.00 4.30
3170 3480 2.838225 CCTACACCCGCGATCCCT 60.838 66.667 8.23 0.00 0.00 4.20
3171 3481 3.925090 CCCTACACCCGCGATCCC 61.925 72.222 8.23 0.00 0.00 3.85
3172 3482 2.836360 TCCCTACACCCGCGATCC 60.836 66.667 8.23 0.00 0.00 3.36
3173 3483 2.728817 CTCCCTACACCCGCGATC 59.271 66.667 8.23 0.00 0.00 3.69
3174 3484 2.838225 CCTCCCTACACCCGCGAT 60.838 66.667 8.23 0.00 0.00 4.58
3178 3488 2.285144 AACCCCTCCCTACACCCG 60.285 66.667 0.00 0.00 0.00 5.28
3179 3489 2.306384 CCAACCCCTCCCTACACCC 61.306 68.421 0.00 0.00 0.00 4.61
3180 3490 2.306384 CCCAACCCCTCCCTACACC 61.306 68.421 0.00 0.00 0.00 4.16
3181 3491 1.229723 TCCCAACCCCTCCCTACAC 60.230 63.158 0.00 0.00 0.00 2.90
3182 3492 1.082206 CTCCCAACCCCTCCCTACA 59.918 63.158 0.00 0.00 0.00 2.74
3183 3493 1.693103 CCTCCCAACCCCTCCCTAC 60.693 68.421 0.00 0.00 0.00 3.18
3184 3494 1.243230 ATCCTCCCAACCCCTCCCTA 61.243 60.000 0.00 0.00 0.00 3.53
3185 3495 1.243230 TATCCTCCCAACCCCTCCCT 61.243 60.000 0.00 0.00 0.00 4.20
3186 3496 0.103876 ATATCCTCCCAACCCCTCCC 60.104 60.000 0.00 0.00 0.00 4.30
3187 3497 1.363246 GATATCCTCCCAACCCCTCC 58.637 60.000 0.00 0.00 0.00 4.30
3188 3498 0.977395 CGATATCCTCCCAACCCCTC 59.023 60.000 0.00 0.00 0.00 4.30
3189 3499 0.566176 TCGATATCCTCCCAACCCCT 59.434 55.000 0.00 0.00 0.00 4.79
3190 3500 0.685660 GTCGATATCCTCCCAACCCC 59.314 60.000 0.00 0.00 0.00 4.95
3191 3501 1.070289 GTGTCGATATCCTCCCAACCC 59.930 57.143 0.00 0.00 0.00 4.11
3192 3502 1.269621 CGTGTCGATATCCTCCCAACC 60.270 57.143 0.00 0.00 0.00 3.77
3193 3503 1.679680 TCGTGTCGATATCCTCCCAAC 59.320 52.381 0.00 0.00 0.00 3.77
3194 3504 1.679680 GTCGTGTCGATATCCTCCCAA 59.320 52.381 0.00 0.00 38.42 4.12
3195 3505 1.315690 GTCGTGTCGATATCCTCCCA 58.684 55.000 0.00 0.00 38.42 4.37
3196 3506 0.597072 GGTCGTGTCGATATCCTCCC 59.403 60.000 0.00 0.00 38.42 4.30
3197 3507 1.606903 AGGTCGTGTCGATATCCTCC 58.393 55.000 0.00 0.00 38.42 4.30
3198 3508 2.030981 GGAAGGTCGTGTCGATATCCTC 60.031 54.545 0.00 0.00 38.42 3.71
3199 3509 1.955080 GGAAGGTCGTGTCGATATCCT 59.045 52.381 0.00 0.00 38.42 3.24
3200 3510 1.679680 TGGAAGGTCGTGTCGATATCC 59.320 52.381 0.00 11.15 38.42 2.59
3201 3511 3.566523 GATGGAAGGTCGTGTCGATATC 58.433 50.000 0.00 0.00 38.42 1.63
3202 3512 2.031069 CGATGGAAGGTCGTGTCGATAT 60.031 50.000 0.00 0.00 38.42 1.63
3203 3513 1.332686 CGATGGAAGGTCGTGTCGATA 59.667 52.381 0.00 0.00 38.42 2.92
3204 3514 0.100682 CGATGGAAGGTCGTGTCGAT 59.899 55.000 0.00 0.00 38.42 3.59
3205 3515 1.504900 CGATGGAAGGTCGTGTCGA 59.495 57.895 0.00 0.00 34.56 4.20
3206 3516 1.516386 CCGATGGAAGGTCGTGTCG 60.516 63.158 0.00 0.00 37.39 4.35
3207 3517 1.590147 ACCGATGGAAGGTCGTGTC 59.410 57.895 0.00 0.00 37.44 3.67
3208 3518 3.787394 ACCGATGGAAGGTCGTGT 58.213 55.556 0.00 0.00 37.44 4.49
3213 3523 2.629051 GAATTTCGACCGATGGAAGGT 58.371 47.619 0.00 0.00 46.16 3.50
3214 3524 1.593006 CGAATTTCGACCGATGGAAGG 59.407 52.381 13.45 0.00 43.74 3.46
3215 3525 1.004927 GCGAATTTCGACCGATGGAAG 60.005 52.381 22.25 0.00 43.74 3.46
3216 3526 1.003851 GCGAATTTCGACCGATGGAA 58.996 50.000 22.25 0.00 43.74 3.53
3217 3527 0.808453 GGCGAATTTCGACCGATGGA 60.808 55.000 22.25 0.00 43.36 3.41
3218 3528 1.641677 GGCGAATTTCGACCGATGG 59.358 57.895 22.25 0.00 43.36 3.51
3225 3535 3.496131 GCCGCTGGCGAATTTCGA 61.496 61.111 22.25 1.56 43.74 3.71
3253 3563 4.785453 CAGCCCCACCTTCGCCTC 62.785 72.222 0.00 0.00 0.00 4.70
3265 3575 4.785453 CAACCTCTCCGGCAGCCC 62.785 72.222 5.63 0.00 35.61 5.19
3266 3576 4.785453 CCAACCTCTCCGGCAGCC 62.785 72.222 0.00 0.00 35.61 4.85
3273 3583 3.553095 AAGTGCCGCCAACCTCTCC 62.553 63.158 0.00 0.00 0.00 3.71
3274 3584 2.032681 AAGTGCCGCCAACCTCTC 59.967 61.111 0.00 0.00 0.00 3.20
3275 3585 2.281761 CAAGTGCCGCCAACCTCT 60.282 61.111 0.00 0.00 0.00 3.69
3276 3586 3.365265 CCAAGTGCCGCCAACCTC 61.365 66.667 0.00 0.00 0.00 3.85
3277 3587 4.204028 ACCAAGTGCCGCCAACCT 62.204 61.111 0.00 0.00 0.00 3.50
3278 3588 3.670377 GACCAAGTGCCGCCAACC 61.670 66.667 0.00 0.00 0.00 3.77
3279 3589 4.025401 CGACCAAGTGCCGCCAAC 62.025 66.667 0.00 0.00 0.00 3.77
3297 3607 4.812476 TGGACAATCGAGCGCCCG 62.812 66.667 4.37 4.37 0.00 6.13
3298 3608 2.892425 CTGGACAATCGAGCGCCC 60.892 66.667 2.29 0.00 0.00 6.13
3299 3609 3.567797 GCTGGACAATCGAGCGCC 61.568 66.667 2.29 0.00 38.40 6.53
3302 3612 3.918220 CGCGCTGGACAATCGAGC 61.918 66.667 5.56 3.00 43.52 5.03
3303 3613 2.202610 TCGCGCTGGACAATCGAG 60.203 61.111 5.56 0.00 0.00 4.04
3304 3614 2.202610 CTCGCGCTGGACAATCGA 60.203 61.111 5.56 0.00 0.00 3.59
3305 3615 3.257561 CCTCGCGCTGGACAATCG 61.258 66.667 5.56 0.00 0.00 3.34
3306 3616 2.892425 CCCTCGCGCTGGACAATC 60.892 66.667 17.46 0.00 0.00 2.67
3307 3617 3.376935 CTCCCTCGCGCTGGACAAT 62.377 63.158 17.46 0.00 0.00 2.71
3308 3618 4.069232 CTCCCTCGCGCTGGACAA 62.069 66.667 17.46 4.23 0.00 3.18
3323 3633 2.361427 CTTATTTCGTGCGCCCGCTC 62.361 60.000 7.61 9.32 42.51 5.03
3324 3634 2.435234 TTATTTCGTGCGCCCGCT 60.435 55.556 7.61 0.00 42.51 5.52
3325 3635 2.022762 CTTATTTCGTGCGCCCGC 59.977 61.111 7.61 5.60 42.35 6.13
3326 3636 2.022762 GCTTATTTCGTGCGCCCG 59.977 61.111 5.73 5.73 0.00 6.13
3327 3637 2.022762 CGCTTATTTCGTGCGCCC 59.977 61.111 4.18 0.00 43.08 6.13
3331 3641 2.647791 GCGCCGCTTATTTCGTGC 60.648 61.111 0.00 0.00 0.00 5.34
3332 3642 2.349648 CGCGCCGCTTATTTCGTG 60.350 61.111 7.78 0.00 0.00 4.35
3347 3657 0.247695 GGAGTAAAACAGCATCGCGC 60.248 55.000 0.00 0.00 42.91 6.86
3348 3658 1.075542 TGGAGTAAAACAGCATCGCG 58.924 50.000 0.00 0.00 0.00 5.87
3349 3659 1.804151 TGTGGAGTAAAACAGCATCGC 59.196 47.619 0.00 0.00 0.00 4.58
3350 3660 2.159841 CGTGTGGAGTAAAACAGCATCG 60.160 50.000 0.00 0.00 0.00 3.84
3351 3661 2.412847 GCGTGTGGAGTAAAACAGCATC 60.413 50.000 0.00 0.00 0.00 3.91
3352 3662 1.535462 GCGTGTGGAGTAAAACAGCAT 59.465 47.619 0.00 0.00 0.00 3.79
3353 3663 0.941542 GCGTGTGGAGTAAAACAGCA 59.058 50.000 0.00 0.00 0.00 4.41
3354 3664 1.226746 AGCGTGTGGAGTAAAACAGC 58.773 50.000 0.00 0.00 0.00 4.40
3355 3665 4.319261 GGTTTAGCGTGTGGAGTAAAACAG 60.319 45.833 0.00 0.00 0.00 3.16
3356 3666 3.560896 GGTTTAGCGTGTGGAGTAAAACA 59.439 43.478 0.00 0.00 0.00 2.83
3357 3667 3.058708 GGGTTTAGCGTGTGGAGTAAAAC 60.059 47.826 0.00 0.00 0.00 2.43
3358 3668 3.140623 GGGTTTAGCGTGTGGAGTAAAA 58.859 45.455 0.00 0.00 0.00 1.52
3359 3669 2.769893 GGGTTTAGCGTGTGGAGTAAA 58.230 47.619 0.00 0.00 0.00 2.01
3360 3670 1.337074 CGGGTTTAGCGTGTGGAGTAA 60.337 52.381 0.00 0.00 0.00 2.24
3361 3671 0.244450 CGGGTTTAGCGTGTGGAGTA 59.756 55.000 0.00 0.00 0.00 2.59
3362 3672 1.005394 CGGGTTTAGCGTGTGGAGT 60.005 57.895 0.00 0.00 0.00 3.85
3363 3673 0.601841 AACGGGTTTAGCGTGTGGAG 60.602 55.000 0.00 0.00 0.00 3.86
3364 3674 0.678395 TAACGGGTTTAGCGTGTGGA 59.322 50.000 0.00 0.00 0.00 4.02
3365 3675 1.729284 ATAACGGGTTTAGCGTGTGG 58.271 50.000 0.00 0.00 0.00 4.17
3366 3676 2.604462 GGTATAACGGGTTTAGCGTGTG 59.396 50.000 0.00 0.00 0.00 3.82
3367 3677 2.735126 CGGTATAACGGGTTTAGCGTGT 60.735 50.000 1.07 0.00 33.50 4.49
3368 3678 1.854126 CGGTATAACGGGTTTAGCGTG 59.146 52.381 1.07 0.00 33.50 5.34
3369 3679 1.802508 GCGGTATAACGGGTTTAGCGT 60.803 52.381 12.94 0.00 38.64 5.07
3370 3680 0.854705 GCGGTATAACGGGTTTAGCG 59.145 55.000 12.94 10.12 39.20 4.26
3371 3681 0.854705 CGCGGTATAACGGGTTTAGC 59.145 55.000 18.29 0.00 41.21 3.09
3372 3682 2.388121 CTCGCGGTATAACGGGTTTAG 58.612 52.381 24.31 12.59 45.53 1.85
3373 3683 1.535860 GCTCGCGGTATAACGGGTTTA 60.536 52.381 24.31 6.99 45.53 2.01
3374 3684 0.807275 GCTCGCGGTATAACGGGTTT 60.807 55.000 24.31 0.00 45.53 3.27
3375 3685 1.227060 GCTCGCGGTATAACGGGTT 60.227 57.895 24.31 0.00 45.53 4.11
3376 3686 2.414594 GCTCGCGGTATAACGGGT 59.585 61.111 24.31 0.00 45.53 5.28
3377 3687 2.728383 CGCTCGCGGTATAACGGG 60.728 66.667 20.24 20.24 46.53 5.28
3378 3688 2.025156 ACGCTCGCGGTATAACGG 59.975 61.111 12.94 2.23 44.69 4.44
3379 3689 0.659417 ATCACGCTCGCGGTATAACG 60.659 55.000 16.18 5.62 44.69 3.18
3380 3690 1.484356 AATCACGCTCGCGGTATAAC 58.516 50.000 16.18 0.00 44.69 1.89
3381 3691 3.564235 ATAATCACGCTCGCGGTATAA 57.436 42.857 16.18 0.00 44.69 0.98
3382 3692 3.239254 CAATAATCACGCTCGCGGTATA 58.761 45.455 16.18 3.90 44.69 1.47
3383 3693 2.058798 CAATAATCACGCTCGCGGTAT 58.941 47.619 16.18 5.61 44.69 2.73
3384 3694 1.483316 CAATAATCACGCTCGCGGTA 58.517 50.000 16.18 3.34 44.69 4.02
3385 3695 1.762222 GCAATAATCACGCTCGCGGT 61.762 55.000 16.18 0.00 44.69 5.68
3386 3696 1.083401 GCAATAATCACGCTCGCGG 60.083 57.895 16.18 4.97 44.69 6.46
3387 3697 1.435488 CGCAATAATCACGCTCGCG 60.435 57.895 10.06 10.06 46.03 5.87
3388 3698 0.651610 CACGCAATAATCACGCTCGC 60.652 55.000 0.00 0.00 0.00 5.03
3389 3699 0.043053 CCACGCAATAATCACGCTCG 60.043 55.000 0.00 0.00 0.00 5.03
3390 3700 0.316196 GCCACGCAATAATCACGCTC 60.316 55.000 0.00 0.00 0.00 5.03
3391 3701 0.744414 AGCCACGCAATAATCACGCT 60.744 50.000 0.00 0.00 0.00 5.07
3392 3702 0.589729 CAGCCACGCAATAATCACGC 60.590 55.000 0.00 0.00 0.00 5.34
3393 3703 0.589729 GCAGCCACGCAATAATCACG 60.590 55.000 0.00 0.00 0.00 4.35
3394 3704 0.734889 AGCAGCCACGCAATAATCAC 59.265 50.000 0.00 0.00 0.00 3.06
3395 3705 0.734309 CAGCAGCCACGCAATAATCA 59.266 50.000 0.00 0.00 0.00 2.57
3396 3706 0.029834 CCAGCAGCCACGCAATAATC 59.970 55.000 0.00 0.00 0.00 1.75
3397 3707 0.394216 TCCAGCAGCCACGCAATAAT 60.394 50.000 0.00 0.00 0.00 1.28
3398 3708 1.002746 TCCAGCAGCCACGCAATAA 60.003 52.632 0.00 0.00 0.00 1.40
3399 3709 1.745115 GTCCAGCAGCCACGCAATA 60.745 57.895 0.00 0.00 0.00 1.90
3400 3710 3.058160 GTCCAGCAGCCACGCAAT 61.058 61.111 0.00 0.00 0.00 3.56
3409 3719 4.351054 AAAGGGGCGGTCCAGCAG 62.351 66.667 0.00 0.00 39.27 4.24
3410 3720 4.344865 GAAAGGGGCGGTCCAGCA 62.345 66.667 0.00 0.00 39.27 4.41
3423 3733 1.278637 GTGTGCACGGAACCGAAAG 59.721 57.895 20.14 9.91 42.83 2.62
3424 3734 1.025113 TTGTGTGCACGGAACCGAAA 61.025 50.000 20.14 2.04 42.83 3.46
3425 3735 1.025113 TTTGTGTGCACGGAACCGAA 61.025 50.000 20.14 1.01 42.83 4.30
3426 3736 1.025113 TTTTGTGTGCACGGAACCGA 61.025 50.000 20.14 0.00 42.83 4.69
3427 3737 0.179161 TTTTTGTGTGCACGGAACCG 60.179 50.000 13.13 11.83 46.03 4.44
3428 3738 3.723554 TTTTTGTGTGCACGGAACC 57.276 47.368 13.13 0.00 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.