Multiple sequence alignment - TraesCS7A01G367300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G367300 chr7A 100.000 4166 0 0 1 4166 540770636 540774801 0.000000e+00 7694.0
1 TraesCS7A01G367300 chr7A 90.213 2350 201 8 697 3018 540755418 540757766 0.000000e+00 3038.0
2 TraesCS7A01G367300 chr7A 97.481 1429 36 0 1590 3018 540283208 540284636 0.000000e+00 2440.0
3 TraesCS7A01G367300 chr7A 83.953 1184 109 42 402 1521 540282045 540283211 0.000000e+00 1059.0
4 TraesCS7A01G367300 chr7A 83.548 620 85 14 813 1428 539852831 539853437 7.820000e-157 564.0
5 TraesCS7A01G367300 chr7A 100.000 118 0 0 3018 3135 540773528 540773645 7.010000e-53 219.0
6 TraesCS7A01G367300 chr7A 100.000 118 0 0 2893 3010 540773653 540773770 7.010000e-53 219.0
7 TraesCS7A01G367300 chr7A 98.261 115 2 0 3018 3132 540284511 540284625 7.060000e-48 202.0
8 TraesCS7A01G367300 chr7A 96.040 101 4 0 152 252 540770750 540770850 9.270000e-37 165.0
9 TraesCS7A01G367300 chr7A 96.040 101 4 0 115 215 540770787 540770887 9.270000e-37 165.0
10 TraesCS7A01G367300 chr7A 95.312 64 3 0 189 252 540770750 540770813 7.370000e-18 102.0
11 TraesCS7A01G367300 chr7A 95.312 64 3 0 115 178 540770824 540770887 7.370000e-18 102.0
12 TraesCS7A01G367300 chr7D 89.355 2790 211 44 286 3018 459608375 459605615 0.000000e+00 3428.0
13 TraesCS7A01G367300 chr7D 90.617 2462 204 19 579 3018 459466647 459464191 0.000000e+00 3241.0
14 TraesCS7A01G367300 chr7D 93.908 2134 116 3 896 3018 459433493 459431363 0.000000e+00 3208.0
15 TraesCS7A01G367300 chr7D 79.560 1365 266 12 1418 2776 459746043 459744686 0.000000e+00 963.0
16 TraesCS7A01G367300 chr7D 84.219 602 81 11 829 1428 459746838 459746249 1.300000e-159 573.0
17 TraesCS7A01G367300 chr7D 97.458 118 3 0 3018 3135 459431488 459431371 7.060000e-48 202.0
18 TraesCS7A01G367300 chr7D 86.441 118 16 0 3018 3135 459464316 459464199 3.380000e-26 130.0
19 TraesCS7A01G367300 chr7D 92.857 42 3 0 50 91 577319655 577319696 1.250000e-05 62.1
20 TraesCS7A01G367300 chr7D 100.000 28 0 0 55 82 250654382 250654355 8.000000e-03 52.8
21 TraesCS7A01G367300 chr7B 90.354 2571 185 34 494 3018 481618369 481615816 0.000000e+00 3315.0
22 TraesCS7A01G367300 chr7B 89.256 121 13 0 3018 3138 481615941 481615821 7.210000e-33 152.0
23 TraesCS7A01G367300 chr6B 88.051 1632 189 4 957 2587 6195980 6197606 0.000000e+00 1929.0
24 TraesCS7A01G367300 chr2B 93.160 1038 62 5 3138 4166 137183172 137184209 0.000000e+00 1515.0
25 TraesCS7A01G367300 chr6D 89.339 1135 121 0 1454 2588 3028787 3029921 0.000000e+00 1426.0
26 TraesCS7A01G367300 chr6D 92.453 53 1 3 701 753 3026462 3026511 5.780000e-09 73.1
27 TraesCS7A01G367300 chr1B 91.407 1059 47 16 3136 4164 22157072 22156028 0.000000e+00 1411.0
28 TraesCS7A01G367300 chr3A 91.118 1002 77 6 3175 4166 728640962 728641961 0.000000e+00 1347.0
29 TraesCS7A01G367300 chr3A 84.783 184 16 9 3136 3309 64027114 64026933 1.540000e-39 174.0
30 TraesCS7A01G367300 chrUn 89.351 817 74 7 3288 4094 47649562 47650375 0.000000e+00 1014.0
31 TraesCS7A01G367300 chr2D 84.742 1029 101 25 3136 4141 390693 391688 0.000000e+00 979.0
32 TraesCS7A01G367300 chr1D 84.631 1002 104 22 3136 4119 365971259 365972228 0.000000e+00 952.0
33 TraesCS7A01G367300 chr1D 87.547 795 88 7 3359 4146 145544233 145545023 0.000000e+00 909.0
34 TraesCS7A01G367300 chr5B 83.316 983 122 23 3134 4095 711235344 711236305 0.000000e+00 869.0
35 TraesCS7A01G367300 chr5B 87.203 758 79 10 3136 3886 282702465 282701719 0.000000e+00 846.0
36 TraesCS7A01G367300 chr2A 89.600 500 44 4 3628 4123 299799718 299800213 2.730000e-176 628.0
37 TraesCS7A01G367300 chr4B 87.413 429 47 4 3700 4123 3749919 3750345 1.740000e-133 486.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G367300 chr7A 540770636 540774801 4165 False 7694.000000 7694 100.000000 1 4166 1 chr7A.!!$F3 4165
1 TraesCS7A01G367300 chr7A 540755418 540757766 2348 False 3038.000000 3038 90.213000 697 3018 1 chr7A.!!$F2 2321
2 TraesCS7A01G367300 chr7A 540282045 540284636 2591 False 1233.666667 2440 93.231667 402 3132 3 chr7A.!!$F4 2730
3 TraesCS7A01G367300 chr7A 539852831 539853437 606 False 564.000000 564 83.548000 813 1428 1 chr7A.!!$F1 615
4 TraesCS7A01G367300 chr7D 459605615 459608375 2760 True 3428.000000 3428 89.355000 286 3018 1 chr7D.!!$R2 2732
5 TraesCS7A01G367300 chr7D 459431363 459433493 2130 True 1705.000000 3208 95.683000 896 3135 2 chr7D.!!$R3 2239
6 TraesCS7A01G367300 chr7D 459464191 459466647 2456 True 1685.500000 3241 88.529000 579 3135 2 chr7D.!!$R4 2556
7 TraesCS7A01G367300 chr7D 459744686 459746838 2152 True 768.000000 963 81.889500 829 2776 2 chr7D.!!$R5 1947
8 TraesCS7A01G367300 chr7B 481615816 481618369 2553 True 1733.500000 3315 89.805000 494 3138 2 chr7B.!!$R1 2644
9 TraesCS7A01G367300 chr6B 6195980 6197606 1626 False 1929.000000 1929 88.051000 957 2587 1 chr6B.!!$F1 1630
10 TraesCS7A01G367300 chr2B 137183172 137184209 1037 False 1515.000000 1515 93.160000 3138 4166 1 chr2B.!!$F1 1028
11 TraesCS7A01G367300 chr6D 3026462 3029921 3459 False 749.550000 1426 90.896000 701 2588 2 chr6D.!!$F1 1887
12 TraesCS7A01G367300 chr1B 22156028 22157072 1044 True 1411.000000 1411 91.407000 3136 4164 1 chr1B.!!$R1 1028
13 TraesCS7A01G367300 chr3A 728640962 728641961 999 False 1347.000000 1347 91.118000 3175 4166 1 chr3A.!!$F1 991
14 TraesCS7A01G367300 chrUn 47649562 47650375 813 False 1014.000000 1014 89.351000 3288 4094 1 chrUn.!!$F1 806
15 TraesCS7A01G367300 chr2D 390693 391688 995 False 979.000000 979 84.742000 3136 4141 1 chr2D.!!$F1 1005
16 TraesCS7A01G367300 chr1D 365971259 365972228 969 False 952.000000 952 84.631000 3136 4119 1 chr1D.!!$F2 983
17 TraesCS7A01G367300 chr1D 145544233 145545023 790 False 909.000000 909 87.547000 3359 4146 1 chr1D.!!$F1 787
18 TraesCS7A01G367300 chr5B 711235344 711236305 961 False 869.000000 869 83.316000 3134 4095 1 chr5B.!!$F1 961
19 TraesCS7A01G367300 chr5B 282701719 282702465 746 True 846.000000 846 87.203000 3136 3886 1 chr5B.!!$R1 750

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.032540 GCTCCAAACCAAACAGCCTG 59.967 55.0 0.00 0.0 0.0 4.85 F
622 644 0.039798 GCGTCGACACTGTACCTCAA 60.040 55.0 17.16 0.0 0.0 3.02 F
709 738 0.105039 GGCATCGTCCCAGTCTAAGG 59.895 60.0 0.00 0.0 0.0 2.69 F
1013 1222 0.108585 ACAACAATGGCGTCCTCTGT 59.891 50.0 0.00 0.0 0.0 3.41 F
2269 4120 0.178932 TAGTCTGGAGTGGCTGTGGT 60.179 55.0 0.00 0.0 0.0 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1254 1463 0.254178 GGCCTGAGATGCCTTCTGAA 59.746 55.000 0.00 0.00 45.70 3.02 R
2289 4140 0.941963 TCTCTGGTGGTATAGGCCCT 59.058 55.000 0.00 0.00 0.00 5.19 R
2417 4268 1.604278 GCCCTGACAGTCTGTTTTGTC 59.396 52.381 7.00 0.00 43.07 3.18 R
2906 4757 2.245159 TCCTTCAACTGACACTGCAG 57.755 50.000 13.48 13.48 41.63 4.41 R
3887 5772 0.813821 GATCTGAAAGGCTTGGTGGC 59.186 55.000 0.00 0.00 42.15 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.662596 TACGTTGGGCAGCTCAGG 59.337 61.111 0.00 0.00 0.00 3.86
18 19 2.954684 TACGTTGGGCAGCTCAGGG 61.955 63.158 0.00 0.00 0.00 4.45
28 29 2.436109 GCTCAGGGCTCCAAACCA 59.564 61.111 0.00 0.00 38.06 3.67
29 30 1.228552 GCTCAGGGCTCCAAACCAA 60.229 57.895 0.00 0.00 38.06 3.67
30 31 0.827507 GCTCAGGGCTCCAAACCAAA 60.828 55.000 0.00 0.00 38.06 3.28
31 32 0.961753 CTCAGGGCTCCAAACCAAAC 59.038 55.000 0.00 0.00 0.00 2.93
32 33 0.260230 TCAGGGCTCCAAACCAAACA 59.740 50.000 0.00 0.00 0.00 2.83
33 34 0.675633 CAGGGCTCCAAACCAAACAG 59.324 55.000 0.00 0.00 0.00 3.16
34 35 1.115326 AGGGCTCCAAACCAAACAGC 61.115 55.000 0.00 0.00 0.00 4.40
35 36 1.367471 GGCTCCAAACCAAACAGCC 59.633 57.895 0.00 0.00 42.87 4.85
36 37 1.115326 GGCTCCAAACCAAACAGCCT 61.115 55.000 0.84 0.00 45.40 4.58
37 38 0.032540 GCTCCAAACCAAACAGCCTG 59.967 55.000 0.00 0.00 0.00 4.85
38 39 1.402787 CTCCAAACCAAACAGCCTGT 58.597 50.000 0.00 0.00 0.00 4.00
39 40 2.582052 CTCCAAACCAAACAGCCTGTA 58.418 47.619 0.00 0.00 0.00 2.74
40 41 2.955660 CTCCAAACCAAACAGCCTGTAA 59.044 45.455 0.00 0.00 0.00 2.41
41 42 2.955660 TCCAAACCAAACAGCCTGTAAG 59.044 45.455 0.00 0.00 0.00 2.34
42 43 2.955660 CCAAACCAAACAGCCTGTAAGA 59.044 45.455 0.00 0.00 34.07 2.10
43 44 3.383185 CCAAACCAAACAGCCTGTAAGAA 59.617 43.478 0.00 0.00 34.07 2.52
44 45 4.359706 CAAACCAAACAGCCTGTAAGAAC 58.640 43.478 0.00 0.00 34.07 3.01
45 46 2.583143 ACCAAACAGCCTGTAAGAACC 58.417 47.619 0.00 0.00 34.07 3.62
46 47 1.886542 CCAAACAGCCTGTAAGAACCC 59.113 52.381 0.00 0.00 34.07 4.11
47 48 2.489073 CCAAACAGCCTGTAAGAACCCT 60.489 50.000 0.00 0.00 34.07 4.34
48 49 3.222603 CAAACAGCCTGTAAGAACCCTT 58.777 45.455 0.00 0.00 34.07 3.95
49 50 3.595190 AACAGCCTGTAAGAACCCTTT 57.405 42.857 0.00 0.00 34.07 3.11
50 51 3.595190 ACAGCCTGTAAGAACCCTTTT 57.405 42.857 0.00 0.00 34.07 2.27
51 52 3.487372 ACAGCCTGTAAGAACCCTTTTC 58.513 45.455 0.00 0.00 34.07 2.29
52 53 3.117663 ACAGCCTGTAAGAACCCTTTTCA 60.118 43.478 0.00 0.00 34.07 2.69
53 54 3.253432 CAGCCTGTAAGAACCCTTTTCAC 59.747 47.826 0.00 0.00 34.07 3.18
54 55 2.557056 GCCTGTAAGAACCCTTTTCACC 59.443 50.000 0.00 0.00 34.07 4.02
55 56 3.827722 CCTGTAAGAACCCTTTTCACCA 58.172 45.455 0.00 0.00 34.07 4.17
56 57 4.211920 CCTGTAAGAACCCTTTTCACCAA 58.788 43.478 0.00 0.00 34.07 3.67
57 58 4.647399 CCTGTAAGAACCCTTTTCACCAAA 59.353 41.667 0.00 0.00 34.07 3.28
58 59 5.128008 CCTGTAAGAACCCTTTTCACCAAAA 59.872 40.000 0.00 0.00 34.07 2.44
59 60 5.968254 TGTAAGAACCCTTTTCACCAAAAC 58.032 37.500 0.00 0.00 33.94 2.43
60 61 5.480772 TGTAAGAACCCTTTTCACCAAAACA 59.519 36.000 0.00 0.00 33.94 2.83
61 62 5.491323 AAGAACCCTTTTCACCAAAACAA 57.509 34.783 0.00 0.00 0.00 2.83
62 63 5.692115 AGAACCCTTTTCACCAAAACAAT 57.308 34.783 0.00 0.00 0.00 2.71
63 64 6.061022 AGAACCCTTTTCACCAAAACAATT 57.939 33.333 0.00 0.00 0.00 2.32
64 65 5.879777 AGAACCCTTTTCACCAAAACAATTG 59.120 36.000 3.24 3.24 0.00 2.32
65 66 3.944650 ACCCTTTTCACCAAAACAATTGC 59.055 39.130 5.05 0.00 0.00 3.56
66 67 3.314913 CCCTTTTCACCAAAACAATTGCC 59.685 43.478 5.05 0.00 0.00 4.52
67 68 4.198530 CCTTTTCACCAAAACAATTGCCT 58.801 39.130 5.05 0.00 0.00 4.75
68 69 4.639755 CCTTTTCACCAAAACAATTGCCTT 59.360 37.500 5.05 0.00 0.00 4.35
69 70 5.220835 CCTTTTCACCAAAACAATTGCCTTC 60.221 40.000 5.05 0.00 0.00 3.46
70 71 4.751767 TTCACCAAAACAATTGCCTTCT 57.248 36.364 5.05 0.00 0.00 2.85
71 72 5.860941 TTCACCAAAACAATTGCCTTCTA 57.139 34.783 5.05 0.00 0.00 2.10
72 73 5.860941 TCACCAAAACAATTGCCTTCTAA 57.139 34.783 5.05 0.00 0.00 2.10
73 74 6.418057 TCACCAAAACAATTGCCTTCTAAT 57.582 33.333 5.05 0.00 0.00 1.73
74 75 6.222389 TCACCAAAACAATTGCCTTCTAATG 58.778 36.000 5.05 0.00 0.00 1.90
75 76 6.041409 TCACCAAAACAATTGCCTTCTAATGA 59.959 34.615 5.05 0.00 0.00 2.57
76 77 6.705381 CACCAAAACAATTGCCTTCTAATGAA 59.295 34.615 5.05 0.00 0.00 2.57
77 78 7.226325 CACCAAAACAATTGCCTTCTAATGAAA 59.774 33.333 5.05 0.00 0.00 2.69
78 79 7.938490 ACCAAAACAATTGCCTTCTAATGAAAT 59.062 29.630 5.05 0.00 0.00 2.17
79 80 8.785946 CCAAAACAATTGCCTTCTAATGAAATT 58.214 29.630 5.05 0.00 41.28 1.82
82 83 8.907222 AACAATTGCCTTCTAATGAAATTTGT 57.093 26.923 5.05 0.00 37.87 2.83
83 84 8.907222 ACAATTGCCTTCTAATGAAATTTGTT 57.093 26.923 5.05 0.00 37.87 2.83
84 85 8.776470 ACAATTGCCTTCTAATGAAATTTGTTG 58.224 29.630 5.05 0.00 37.87 3.33
85 86 8.776470 CAATTGCCTTCTAATGAAATTTGTTGT 58.224 29.630 0.00 0.00 37.87 3.32
86 87 7.945033 TTGCCTTCTAATGAAATTTGTTGTC 57.055 32.000 0.00 0.00 37.87 3.18
87 88 7.048629 TGCCTTCTAATGAAATTTGTTGTCA 57.951 32.000 0.00 0.00 37.87 3.58
88 89 7.495901 TGCCTTCTAATGAAATTTGTTGTCAA 58.504 30.769 0.00 0.00 37.87 3.18
89 90 7.984050 TGCCTTCTAATGAAATTTGTTGTCAAA 59.016 29.630 0.00 0.00 45.71 2.69
90 91 8.275632 GCCTTCTAATGAAATTTGTTGTCAAAC 58.724 33.333 0.00 0.00 44.69 2.93
91 92 8.764287 CCTTCTAATGAAATTTGTTGTCAAACC 58.236 33.333 0.00 0.00 44.69 3.27
92 93 9.533253 CTTCTAATGAAATTTGTTGTCAAACCT 57.467 29.630 0.00 0.00 44.69 3.50
93 94 9.883142 TTCTAATGAAATTTGTTGTCAAACCTT 57.117 25.926 0.00 0.00 44.69 3.50
94 95 9.883142 TCTAATGAAATTTGTTGTCAAACCTTT 57.117 25.926 0.00 0.00 44.69 3.11
97 98 9.665719 AATGAAATTTGTTGTCAAACCTTTACT 57.334 25.926 0.00 0.00 44.69 2.24
99 100 9.575783 TGAAATTTGTTGTCAAACCTTTACTAC 57.424 29.630 0.00 0.00 44.69 2.73
100 101 8.936070 AAATTTGTTGTCAAACCTTTACTACC 57.064 30.769 0.00 0.00 44.69 3.18
101 102 7.648039 ATTTGTTGTCAAACCTTTACTACCA 57.352 32.000 0.00 0.00 44.69 3.25
102 103 6.687081 TTGTTGTCAAACCTTTACTACCAG 57.313 37.500 0.00 0.00 35.25 4.00
103 104 5.991861 TGTTGTCAAACCTTTACTACCAGA 58.008 37.500 0.00 0.00 35.25 3.86
104 105 6.053005 TGTTGTCAAACCTTTACTACCAGAG 58.947 40.000 0.00 0.00 35.25 3.35
105 106 4.638304 TGTCAAACCTTTACTACCAGAGC 58.362 43.478 0.00 0.00 0.00 4.09
106 107 4.101898 TGTCAAACCTTTACTACCAGAGCA 59.898 41.667 0.00 0.00 0.00 4.26
107 108 4.691216 GTCAAACCTTTACTACCAGAGCAG 59.309 45.833 0.00 0.00 0.00 4.24
108 109 4.591498 TCAAACCTTTACTACCAGAGCAGA 59.409 41.667 0.00 0.00 0.00 4.26
109 110 4.538746 AACCTTTACTACCAGAGCAGAC 57.461 45.455 0.00 0.00 0.00 3.51
110 111 3.507411 ACCTTTACTACCAGAGCAGACA 58.493 45.455 0.00 0.00 0.00 3.41
111 112 3.258622 ACCTTTACTACCAGAGCAGACAC 59.741 47.826 0.00 0.00 0.00 3.67
112 113 3.368531 CCTTTACTACCAGAGCAGACACC 60.369 52.174 0.00 0.00 0.00 4.16
113 114 2.597578 TACTACCAGAGCAGACACCA 57.402 50.000 0.00 0.00 0.00 4.17
114 115 1.944177 ACTACCAGAGCAGACACCAT 58.056 50.000 0.00 0.00 0.00 3.55
115 116 1.552337 ACTACCAGAGCAGACACCATG 59.448 52.381 0.00 0.00 0.00 3.66
116 117 0.250234 TACCAGAGCAGACACCATGC 59.750 55.000 0.00 0.00 44.18 4.06
117 118 1.748122 CCAGAGCAGACACCATGCC 60.748 63.158 0.00 0.00 44.97 4.40
118 119 1.298993 CAGAGCAGACACCATGCCT 59.701 57.895 0.00 0.00 44.97 4.75
119 120 0.322277 CAGAGCAGACACCATGCCTT 60.322 55.000 0.00 0.00 44.97 4.35
120 121 0.322277 AGAGCAGACACCATGCCTTG 60.322 55.000 0.00 0.00 44.97 3.61
121 122 0.321919 GAGCAGACACCATGCCTTGA 60.322 55.000 0.00 0.00 44.97 3.02
122 123 0.330604 AGCAGACACCATGCCTTGAT 59.669 50.000 0.00 0.00 44.97 2.57
123 124 1.180029 GCAGACACCATGCCTTGATT 58.820 50.000 0.00 0.00 37.73 2.57
124 125 1.135199 GCAGACACCATGCCTTGATTG 60.135 52.381 0.00 0.00 37.73 2.67
125 126 1.475280 CAGACACCATGCCTTGATTGG 59.525 52.381 0.00 0.00 36.56 3.16
137 138 3.815809 CCTTGATTGGCTTATAACCCGA 58.184 45.455 0.00 0.00 0.00 5.14
138 139 4.398319 CCTTGATTGGCTTATAACCCGAT 58.602 43.478 0.00 0.00 0.00 4.18
139 140 4.827284 CCTTGATTGGCTTATAACCCGATT 59.173 41.667 1.69 0.00 0.00 3.34
140 141 6.001460 CCTTGATTGGCTTATAACCCGATTA 58.999 40.000 1.69 0.00 0.00 1.75
141 142 6.149474 CCTTGATTGGCTTATAACCCGATTAG 59.851 42.308 1.69 3.38 0.00 1.73
142 143 6.428083 TGATTGGCTTATAACCCGATTAGA 57.572 37.500 1.69 0.00 0.00 2.10
143 144 6.464222 TGATTGGCTTATAACCCGATTAGAG 58.536 40.000 1.69 0.00 0.00 2.43
144 145 5.881923 TTGGCTTATAACCCGATTAGAGT 57.118 39.130 0.00 0.00 0.00 3.24
145 146 5.464030 TGGCTTATAACCCGATTAGAGTC 57.536 43.478 0.00 0.00 0.00 3.36
146 147 4.022589 TGGCTTATAACCCGATTAGAGTCG 60.023 45.833 0.00 0.00 41.13 4.18
147 148 4.022503 GGCTTATAACCCGATTAGAGTCGT 60.023 45.833 0.00 0.00 39.89 4.34
148 149 5.182001 GGCTTATAACCCGATTAGAGTCGTA 59.818 44.000 0.00 0.00 39.89 3.43
149 150 6.127786 GGCTTATAACCCGATTAGAGTCGTAT 60.128 42.308 0.00 0.00 39.89 3.06
150 151 6.746364 GCTTATAACCCGATTAGAGTCGTATG 59.254 42.308 0.00 0.00 39.89 2.39
151 152 7.574592 GCTTATAACCCGATTAGAGTCGTATGT 60.575 40.741 0.00 0.00 39.89 2.29
152 153 3.984508 ACCCGATTAGAGTCGTATGTG 57.015 47.619 0.00 0.00 39.89 3.21
153 154 2.034305 ACCCGATTAGAGTCGTATGTGC 59.966 50.000 0.00 0.00 39.89 4.57
154 155 2.607282 CCCGATTAGAGTCGTATGTGCC 60.607 54.545 0.00 0.00 39.89 5.01
155 156 2.293677 CCGATTAGAGTCGTATGTGCCT 59.706 50.000 0.00 0.00 39.89 4.75
156 157 3.243434 CCGATTAGAGTCGTATGTGCCTT 60.243 47.826 0.00 0.00 39.89 4.35
157 158 3.731216 CGATTAGAGTCGTATGTGCCTTG 59.269 47.826 0.00 0.00 36.88 3.61
158 159 4.497507 CGATTAGAGTCGTATGTGCCTTGA 60.498 45.833 0.00 0.00 36.88 3.02
159 160 5.533482 GATTAGAGTCGTATGTGCCTTGAT 58.467 41.667 0.00 0.00 0.00 2.57
160 161 3.895232 AGAGTCGTATGTGCCTTGATT 57.105 42.857 0.00 0.00 0.00 2.57
161 162 3.525537 AGAGTCGTATGTGCCTTGATTG 58.474 45.455 0.00 0.00 0.00 2.67
162 163 2.609459 GAGTCGTATGTGCCTTGATTGG 59.391 50.000 0.00 0.00 0.00 3.16
179 180 9.730705 CCTTGATTGGCTTATAATCTGATTAGA 57.269 33.333 14.76 8.27 35.94 2.10
182 183 9.935241 TGATTGGCTTATAATCTGATTAGAGTC 57.065 33.333 14.76 15.26 36.14 3.36
183 184 8.994429 ATTGGCTTATAATCTGATTAGAGTCG 57.006 34.615 14.76 5.39 36.14 4.18
184 185 7.526142 TGGCTTATAATCTGATTAGAGTCGT 57.474 36.000 14.76 1.16 36.14 4.34
185 186 8.631480 TGGCTTATAATCTGATTAGAGTCGTA 57.369 34.615 14.76 0.30 36.14 3.43
186 187 9.244292 TGGCTTATAATCTGATTAGAGTCGTAT 57.756 33.333 14.76 0.77 36.14 3.06
187 188 9.509855 GGCTTATAATCTGATTAGAGTCGTATG 57.490 37.037 14.76 5.89 36.14 2.39
190 191 9.841880 TTATAATCTGATTAGAGTCGTATGTGC 57.158 33.333 14.76 0.00 36.14 4.57
191 192 4.569761 TCTGATTAGAGTCGTATGTGCC 57.430 45.455 0.00 0.00 0.00 5.01
192 193 4.207955 TCTGATTAGAGTCGTATGTGCCT 58.792 43.478 0.00 0.00 0.00 4.75
193 194 4.645136 TCTGATTAGAGTCGTATGTGCCTT 59.355 41.667 0.00 0.00 0.00 4.35
194 195 4.682787 TGATTAGAGTCGTATGTGCCTTG 58.317 43.478 0.00 0.00 0.00 3.61
195 196 4.401202 TGATTAGAGTCGTATGTGCCTTGA 59.599 41.667 0.00 0.00 0.00 3.02
196 197 5.069119 TGATTAGAGTCGTATGTGCCTTGAT 59.931 40.000 0.00 0.00 0.00 2.57
197 198 3.895232 AGAGTCGTATGTGCCTTGATT 57.105 42.857 0.00 0.00 0.00 2.57
198 199 3.525537 AGAGTCGTATGTGCCTTGATTG 58.474 45.455 0.00 0.00 0.00 2.67
199 200 2.609459 GAGTCGTATGTGCCTTGATTGG 59.391 50.000 0.00 0.00 0.00 3.16
213 214 6.966534 CCTTGATTGGCTTATAACCTGATT 57.033 37.500 5.91 0.00 0.00 2.57
215 216 8.103948 CCTTGATTGGCTTATAACCTGATTAG 57.896 38.462 5.91 0.00 0.00 1.73
216 217 7.939039 CCTTGATTGGCTTATAACCTGATTAGA 59.061 37.037 5.91 0.00 0.00 2.10
217 218 8.908786 TTGATTGGCTTATAACCTGATTAGAG 57.091 34.615 5.91 0.00 0.00 2.43
218 219 8.034313 TGATTGGCTTATAACCTGATTAGAGT 57.966 34.615 5.91 0.00 0.00 3.24
219 220 8.150945 TGATTGGCTTATAACCTGATTAGAGTC 58.849 37.037 5.91 0.00 0.00 3.36
220 221 6.085555 TGGCTTATAACCTGATTAGAGTCG 57.914 41.667 5.91 0.00 0.00 4.18
221 222 5.597182 TGGCTTATAACCTGATTAGAGTCGT 59.403 40.000 5.91 0.00 0.00 4.34
222 223 6.774170 TGGCTTATAACCTGATTAGAGTCGTA 59.226 38.462 5.91 0.00 0.00 3.43
223 224 7.450634 TGGCTTATAACCTGATTAGAGTCGTAT 59.549 37.037 5.91 0.00 0.00 3.06
224 225 7.755822 GGCTTATAACCTGATTAGAGTCGTATG 59.244 40.741 0.00 0.00 0.00 2.39
225 226 8.298140 GCTTATAACCTGATTAGAGTCGTATGT 58.702 37.037 0.00 0.00 0.00 2.29
226 227 9.613957 CTTATAACCTGATTAGAGTCGTATGTG 57.386 37.037 0.00 0.00 0.00 3.21
227 228 4.308899 ACCTGATTAGAGTCGTATGTGC 57.691 45.455 0.00 0.00 0.00 4.57
228 229 3.068307 ACCTGATTAGAGTCGTATGTGCC 59.932 47.826 0.00 0.00 0.00 5.01
229 230 3.319405 CCTGATTAGAGTCGTATGTGCCT 59.681 47.826 0.00 0.00 0.00 4.75
230 231 4.202161 CCTGATTAGAGTCGTATGTGCCTT 60.202 45.833 0.00 0.00 0.00 4.35
231 232 4.682787 TGATTAGAGTCGTATGTGCCTTG 58.317 43.478 0.00 0.00 0.00 3.61
232 233 4.401202 TGATTAGAGTCGTATGTGCCTTGA 59.599 41.667 0.00 0.00 0.00 3.02
233 234 5.069119 TGATTAGAGTCGTATGTGCCTTGAT 59.931 40.000 0.00 0.00 0.00 2.57
234 235 3.895232 AGAGTCGTATGTGCCTTGATT 57.105 42.857 0.00 0.00 0.00 2.57
235 236 3.525537 AGAGTCGTATGTGCCTTGATTG 58.474 45.455 0.00 0.00 0.00 2.67
236 237 2.609459 GAGTCGTATGTGCCTTGATTGG 59.391 50.000 0.00 0.00 0.00 3.16
248 249 3.815809 CCTTGATTGGCTTATAACCCGA 58.184 45.455 0.00 0.00 0.00 5.14
249 250 4.398319 CCTTGATTGGCTTATAACCCGAT 58.602 43.478 0.00 0.00 0.00 4.18
250 251 4.827284 CCTTGATTGGCTTATAACCCGATT 59.173 41.667 1.69 0.00 0.00 3.34
251 252 6.001460 CCTTGATTGGCTTATAACCCGATTA 58.999 40.000 1.69 0.00 0.00 1.75
252 253 6.659242 CCTTGATTGGCTTATAACCCGATTAT 59.341 38.462 1.69 0.00 37.29 1.28
253 254 7.827236 CCTTGATTGGCTTATAACCCGATTATA 59.173 37.037 1.69 0.00 35.08 0.98
254 255 9.226606 CTTGATTGGCTTATAACCCGATTATAA 57.773 33.333 1.69 9.91 41.47 0.98
317 318 6.068670 ACAAAGCCACACTCTAAACCTTAAT 58.931 36.000 0.00 0.00 0.00 1.40
318 319 6.549736 ACAAAGCCACACTCTAAACCTTAATT 59.450 34.615 0.00 0.00 0.00 1.40
319 320 7.722285 ACAAAGCCACACTCTAAACCTTAATTA 59.278 33.333 0.00 0.00 0.00 1.40
320 321 8.573035 CAAAGCCACACTCTAAACCTTAATTAA 58.427 33.333 0.00 0.00 0.00 1.40
323 324 6.657966 GCCACACTCTAAACCTTAATTAACCT 59.342 38.462 0.00 0.00 0.00 3.50
345 346 5.184096 CCTGATTATAGAGTCGTATGTGCCT 59.816 44.000 0.00 0.00 0.00 4.75
353 354 8.732746 ATAGAGTCGTATGTGCCTTAAAATTT 57.267 30.769 0.00 0.00 0.00 1.82
356 357 7.174253 AGAGTCGTATGTGCCTTAAAATTTGAA 59.826 33.333 0.00 0.00 0.00 2.69
361 362 9.139174 CGTATGTGCCTTAAAATTTGAAGAAAT 57.861 29.630 15.86 6.92 32.87 2.17
394 395 2.073816 GTGAACAGTGGGGATGTTACG 58.926 52.381 0.00 0.00 40.86 3.18
397 398 1.640917 ACAGTGGGGATGTTACGAGT 58.359 50.000 0.00 0.00 0.00 4.18
398 399 1.549170 ACAGTGGGGATGTTACGAGTC 59.451 52.381 0.00 0.00 0.00 3.36
423 428 4.379652 GGAACCTGCAAACATTCAACAAT 58.620 39.130 0.00 0.00 0.00 2.71
430 435 6.645827 CCTGCAAACATTCAACAATATGACAA 59.354 34.615 0.00 0.00 0.00 3.18
434 439 9.532697 GCAAACATTCAACAATATGACAATTTC 57.467 29.630 0.00 0.00 0.00 2.17
496 501 7.771183 TCTCTTGTTATTTTTGCACAGTTTCT 58.229 30.769 0.00 0.00 0.00 2.52
500 505 9.824534 CTTGTTATTTTTGCACAGTTTCTTTTT 57.175 25.926 0.00 0.00 0.00 1.94
554 571 5.849475 TCCTAGCATTCCCTACATCCATTTA 59.151 40.000 0.00 0.00 0.00 1.40
557 574 6.460103 AGCATTCCCTACATCCATTTATCT 57.540 37.500 0.00 0.00 0.00 1.98
605 627 3.575297 CTTCAAGATGAAGCGTGCG 57.425 52.632 7.13 0.00 46.03 5.34
608 630 1.057822 CAAGATGAAGCGTGCGTCG 59.942 57.895 3.46 0.00 43.12 5.12
622 644 0.039798 GCGTCGACACTGTACCTCAA 60.040 55.000 17.16 0.00 0.00 3.02
632 654 2.106511 ACTGTACCTCAAGCAACCACAT 59.893 45.455 0.00 0.00 0.00 3.21
633 655 2.485426 CTGTACCTCAAGCAACCACATG 59.515 50.000 0.00 0.00 0.00 3.21
654 677 2.552155 GCACTCATGTTGTTGGAGGGTA 60.552 50.000 0.00 0.00 34.55 3.69
656 679 2.979678 ACTCATGTTGTTGGAGGGTAGT 59.020 45.455 0.00 0.00 32.98 2.73
677 704 1.472082 TGGGTCAATGCAATGTAAGCG 59.528 47.619 0.85 0.00 33.85 4.68
691 718 2.685380 AGCGGAGGTTGGAGGAGG 60.685 66.667 0.00 0.00 27.67 4.30
706 735 0.755698 GGAGGCATCGTCCCAGTCTA 60.756 60.000 0.00 0.00 32.87 2.59
709 738 0.105039 GGCATCGTCCCAGTCTAAGG 59.895 60.000 0.00 0.00 0.00 2.69
711 740 0.824109 CATCGTCCCAGTCTAAGGCA 59.176 55.000 0.00 0.00 0.00 4.75
794 953 2.814336 GGGCTTGAACAACTACTTCCAG 59.186 50.000 0.00 0.00 0.00 3.86
807 966 6.038997 ACTACTTCCAGGTCACAACTAATC 57.961 41.667 0.00 0.00 0.00 1.75
812 971 4.422057 TCCAGGTCACAACTAATCCAGTA 58.578 43.478 0.00 0.00 36.04 2.74
823 1010 8.946085 CACAACTAATCCAGTAAGCAAAATCTA 58.054 33.333 0.00 0.00 36.04 1.98
872 1070 2.106511 CCCGTTCCCACCATATTGATCT 59.893 50.000 0.00 0.00 0.00 2.75
877 1075 5.512060 CGTTCCCACCATATTGATCTCTGAT 60.512 44.000 0.00 0.00 0.00 2.90
887 1085 3.839051 TGATCTCTGATCCGCGAATAG 57.161 47.619 8.23 0.00 0.00 1.73
888 1086 2.095008 TGATCTCTGATCCGCGAATAGC 60.095 50.000 8.23 0.00 43.95 2.97
928 1126 5.221130 GGTTAGCTACTATCACATTCGACC 58.779 45.833 0.00 0.00 0.00 4.79
934 1132 2.120232 CTATCACATTCGACCGCTGAC 58.880 52.381 0.00 0.00 0.00 3.51
991 1200 2.939103 CTCCATAGCTGTAACCTGCAAC 59.061 50.000 0.00 0.00 37.95 4.17
992 1201 2.304470 TCCATAGCTGTAACCTGCAACA 59.696 45.455 0.00 0.00 37.95 3.33
1008 1217 1.857837 CAACAAACAACAATGGCGTCC 59.142 47.619 0.00 0.00 0.00 4.79
1013 1222 0.108585 ACAACAATGGCGTCCTCTGT 59.891 50.000 0.00 0.00 0.00 3.41
1030 1239 2.023673 CTGTTGTCTTGTTTCCAGGCA 58.976 47.619 0.00 0.00 0.00 4.75
1254 1463 4.265073 GTGTGATTGAGCTGGACCTTAAT 58.735 43.478 0.00 0.00 0.00 1.40
1535 3386 3.108376 GTCCATCCCTCCAAGTACTTCT 58.892 50.000 4.77 0.00 0.00 2.85
1607 3458 7.756395 ACACATCATCTCTTCTTGACATTTT 57.244 32.000 0.00 0.00 0.00 1.82
1824 3675 4.667573 TCTCAACACTGGAGATACTGACT 58.332 43.478 0.00 0.00 36.52 3.41
1849 3700 0.468029 AGCCAACAACTTGTCTGGGG 60.468 55.000 17.62 9.72 32.74 4.96
1882 3733 7.385478 CACCATCTCTCTTCAATATGTCATCAG 59.615 40.741 0.00 0.00 0.00 2.90
2269 4120 0.178932 TAGTCTGGAGTGGCTGTGGT 60.179 55.000 0.00 0.00 0.00 4.16
2405 4256 0.314935 AATTTGCACAGCTTGGTCCG 59.685 50.000 0.00 0.00 0.00 4.79
2410 4261 1.014564 GCACAGCTTGGTCCGTCTAC 61.015 60.000 0.00 0.00 0.00 2.59
2417 4268 0.688487 TTGGTCCGTCTACCCTTTGG 59.312 55.000 0.00 0.00 38.90 3.28
2520 4371 0.387929 TTAGCGGAAGGATACCTGCG 59.612 55.000 0.00 0.00 32.13 5.18
2835 4686 4.175962 TCCTCACATCCTTAAGTTCCCTT 58.824 43.478 0.97 0.00 34.56 3.95
2836 4687 5.347124 TCCTCACATCCTTAAGTTCCCTTA 58.653 41.667 0.97 0.00 31.89 2.69
2998 4849 2.427095 ACACAAGTTGACAGAAAAGGGC 59.573 45.455 10.54 0.00 0.00 5.19
3007 4858 4.440880 TGACAGAAAAGGGCAACAAAATG 58.559 39.130 0.00 0.00 39.74 2.32
3018 4869 2.927871 GCAACAAAATGCATCGGCTCTT 60.928 45.455 0.00 0.00 45.70 2.85
3019 4870 3.319755 CAACAAAATGCATCGGCTCTTT 58.680 40.909 0.00 0.00 41.91 2.52
3020 4871 3.665745 ACAAAATGCATCGGCTCTTTT 57.334 38.095 0.00 0.00 41.91 2.27
3021 4872 4.782019 ACAAAATGCATCGGCTCTTTTA 57.218 36.364 0.00 0.00 41.91 1.52
3022 4873 5.132897 ACAAAATGCATCGGCTCTTTTAA 57.867 34.783 0.00 0.00 41.91 1.52
3023 4874 4.923281 ACAAAATGCATCGGCTCTTTTAAC 59.077 37.500 0.00 0.00 41.91 2.01
3024 4875 4.782019 AAATGCATCGGCTCTTTTAACA 57.218 36.364 0.00 0.00 41.91 2.41
3025 4876 4.782019 AATGCATCGGCTCTTTTAACAA 57.218 36.364 0.00 0.00 41.91 2.83
3026 4877 4.989279 ATGCATCGGCTCTTTTAACAAT 57.011 36.364 0.00 0.00 41.91 2.71
3027 4878 6.449635 AATGCATCGGCTCTTTTAACAATA 57.550 33.333 0.00 0.00 41.91 1.90
3028 4879 5.229921 TGCATCGGCTCTTTTAACAATAC 57.770 39.130 0.00 0.00 41.91 1.89
3029 4880 4.941263 TGCATCGGCTCTTTTAACAATACT 59.059 37.500 0.00 0.00 41.91 2.12
3030 4881 5.163764 TGCATCGGCTCTTTTAACAATACTG 60.164 40.000 0.00 0.00 41.91 2.74
3031 4882 4.939509 TCGGCTCTTTTAACAATACTGC 57.060 40.909 0.00 0.00 0.00 4.40
3032 4883 4.575885 TCGGCTCTTTTAACAATACTGCT 58.424 39.130 0.00 0.00 0.00 4.24
3033 4884 4.391830 TCGGCTCTTTTAACAATACTGCTG 59.608 41.667 0.00 0.00 0.00 4.41
3034 4885 4.415735 GGCTCTTTTAACAATACTGCTGC 58.584 43.478 0.00 0.00 0.00 5.25
3035 4886 4.082787 GGCTCTTTTAACAATACTGCTGCA 60.083 41.667 0.88 0.88 0.00 4.41
3036 4887 5.091431 GCTCTTTTAACAATACTGCTGCAG 58.909 41.667 27.02 27.02 37.52 4.41
3038 4889 6.000891 TCTTTTAACAATACTGCTGCAGTG 57.999 37.500 37.89 26.20 45.01 3.66
3039 4890 5.530915 TCTTTTAACAATACTGCTGCAGTGT 59.469 36.000 37.89 31.21 45.01 3.55
3040 4891 5.356882 TTTAACAATACTGCTGCAGTGTC 57.643 39.130 37.89 0.00 45.01 3.67
3041 4892 2.549064 ACAATACTGCTGCAGTGTCA 57.451 45.000 37.89 23.16 45.01 3.58
3042 4893 2.420642 ACAATACTGCTGCAGTGTCAG 58.579 47.619 37.89 28.74 45.01 3.51
3043 4894 2.224378 ACAATACTGCTGCAGTGTCAGT 60.224 45.455 37.89 29.28 45.01 3.41
3044 4895 2.810274 CAATACTGCTGCAGTGTCAGTT 59.190 45.455 37.89 22.87 45.01 3.16
3045 4896 1.869774 TACTGCTGCAGTGTCAGTTG 58.130 50.000 37.89 11.45 45.01 3.16
3046 4897 0.178767 ACTGCTGCAGTGTCAGTTGA 59.821 50.000 32.54 0.00 43.63 3.18
3047 4898 1.302366 CTGCTGCAGTGTCAGTTGAA 58.698 50.000 21.21 0.00 36.49 2.69
3048 4899 1.263484 CTGCTGCAGTGTCAGTTGAAG 59.737 52.381 21.21 0.00 36.49 3.02
3049 4900 0.590195 GCTGCAGTGTCAGTTGAAGG 59.410 55.000 16.64 0.00 36.49 3.46
3050 4901 1.811558 GCTGCAGTGTCAGTTGAAGGA 60.812 52.381 16.64 0.00 36.49 3.36
3051 4902 2.564771 CTGCAGTGTCAGTTGAAGGAA 58.435 47.619 5.25 0.00 0.00 3.36
3052 4903 2.945008 CTGCAGTGTCAGTTGAAGGAAA 59.055 45.455 5.25 0.00 0.00 3.13
3053 4904 3.554934 TGCAGTGTCAGTTGAAGGAAAT 58.445 40.909 0.00 0.00 0.00 2.17
3054 4905 3.565482 TGCAGTGTCAGTTGAAGGAAATC 59.435 43.478 0.00 0.00 0.00 2.17
3055 4906 3.565482 GCAGTGTCAGTTGAAGGAAATCA 59.435 43.478 0.00 0.00 0.00 2.57
3056 4907 4.217118 GCAGTGTCAGTTGAAGGAAATCAT 59.783 41.667 0.00 0.00 0.00 2.45
3057 4908 5.696822 CAGTGTCAGTTGAAGGAAATCATG 58.303 41.667 0.00 0.00 0.00 3.07
3058 4909 5.471116 CAGTGTCAGTTGAAGGAAATCATGA 59.529 40.000 0.00 0.00 0.00 3.07
3059 4910 6.150641 CAGTGTCAGTTGAAGGAAATCATGAT 59.849 38.462 1.18 1.18 0.00 2.45
3060 4911 6.718454 AGTGTCAGTTGAAGGAAATCATGATT 59.282 34.615 15.36 15.36 0.00 2.57
3061 4912 7.232127 AGTGTCAGTTGAAGGAAATCATGATTT 59.768 33.333 29.31 29.31 43.14 2.17
3062 4913 7.327761 GTGTCAGTTGAAGGAAATCATGATTTG 59.672 37.037 32.89 18.39 40.77 2.32
3063 4914 7.014518 TGTCAGTTGAAGGAAATCATGATTTGT 59.985 33.333 32.89 19.32 40.77 2.83
3064 4915 7.327761 GTCAGTTGAAGGAAATCATGATTTGTG 59.672 37.037 32.89 17.49 40.77 3.33
3065 4916 7.014518 TCAGTTGAAGGAAATCATGATTTGTGT 59.985 33.333 32.89 19.02 40.77 3.72
3066 4917 8.298854 CAGTTGAAGGAAATCATGATTTGTGTA 58.701 33.333 32.89 15.27 40.77 2.90
3067 4918 8.299570 AGTTGAAGGAAATCATGATTTGTGTAC 58.700 33.333 32.89 21.71 40.77 2.90
3068 4919 7.156876 TGAAGGAAATCATGATTTGTGTACC 57.843 36.000 32.89 25.99 40.77 3.34
3069 4920 6.718912 TGAAGGAAATCATGATTTGTGTACCA 59.281 34.615 32.89 20.08 40.77 3.25
3070 4921 6.764308 AGGAAATCATGATTTGTGTACCAG 57.236 37.500 32.89 0.00 40.77 4.00
3071 4922 5.126061 AGGAAATCATGATTTGTGTACCAGC 59.874 40.000 32.89 17.19 40.77 4.85
3072 4923 5.105797 GGAAATCATGATTTGTGTACCAGCA 60.106 40.000 32.89 0.00 40.77 4.41
3073 4924 6.406177 GGAAATCATGATTTGTGTACCAGCAT 60.406 38.462 32.89 9.02 40.77 3.79
3074 4925 6.534475 AATCATGATTTGTGTACCAGCATT 57.466 33.333 15.36 0.00 0.00 3.56
3075 4926 5.565592 TCATGATTTGTGTACCAGCATTC 57.434 39.130 0.00 0.00 0.00 2.67
3076 4927 4.398988 TCATGATTTGTGTACCAGCATTCC 59.601 41.667 0.00 0.00 0.00 3.01
3077 4928 3.760738 TGATTTGTGTACCAGCATTCCA 58.239 40.909 0.00 0.00 0.00 3.53
3078 4929 4.148079 TGATTTGTGTACCAGCATTCCAA 58.852 39.130 0.00 0.00 0.00 3.53
3079 4930 4.022416 TGATTTGTGTACCAGCATTCCAAC 60.022 41.667 0.00 0.00 0.00 3.77
3080 4931 2.647683 TGTGTACCAGCATTCCAACA 57.352 45.000 0.00 0.00 0.00 3.33
3081 4932 2.503331 TGTGTACCAGCATTCCAACAG 58.497 47.619 0.00 0.00 0.00 3.16
3082 4933 1.812571 GTGTACCAGCATTCCAACAGG 59.187 52.381 0.00 0.00 0.00 4.00
3083 4934 1.702401 TGTACCAGCATTCCAACAGGA 59.298 47.619 0.00 0.00 0.00 3.86
3084 4935 2.290260 TGTACCAGCATTCCAACAGGAG 60.290 50.000 0.00 0.00 31.86 3.69
3085 4936 0.038744 ACCAGCATTCCAACAGGAGG 59.961 55.000 0.00 0.00 31.86 4.30
3086 4937 0.038744 CCAGCATTCCAACAGGAGGT 59.961 55.000 0.00 0.00 31.86 3.85
3087 4938 1.281867 CCAGCATTCCAACAGGAGGTA 59.718 52.381 0.00 0.00 31.86 3.08
3088 4939 2.092212 CCAGCATTCCAACAGGAGGTAT 60.092 50.000 0.00 0.00 31.86 2.73
3089 4940 3.136443 CCAGCATTCCAACAGGAGGTATA 59.864 47.826 0.00 0.00 31.86 1.47
3090 4941 4.130118 CAGCATTCCAACAGGAGGTATAC 58.870 47.826 0.00 0.00 31.86 1.47
3091 4942 3.136626 AGCATTCCAACAGGAGGTATACC 59.863 47.826 14.54 14.54 31.86 2.73
3106 4957 6.182507 AGGTATACCTCTTTGTTCAACACA 57.817 37.500 19.27 0.00 44.77 3.72
3107 4958 6.597562 AGGTATACCTCTTTGTTCAACACAA 58.402 36.000 19.27 0.00 44.77 3.33
3108 4959 6.710744 AGGTATACCTCTTTGTTCAACACAAG 59.289 38.462 19.27 0.00 44.17 3.16
3109 4960 6.485648 GGTATACCTCTTTGTTCAACACAAGT 59.514 38.462 15.09 0.00 46.37 3.16
3110 4961 7.012989 GGTATACCTCTTTGTTCAACACAAGTT 59.987 37.037 15.09 0.00 46.37 2.66
3122 4973 4.718940 AACACAAGTTGACAGAAAAGGG 57.281 40.909 10.54 0.00 36.39 3.95
3123 4974 2.427095 ACACAAGTTGACAGAAAAGGGC 59.573 45.455 10.54 0.00 0.00 5.19
3124 4975 2.426738 CACAAGTTGACAGAAAAGGGCA 59.573 45.455 10.54 0.00 0.00 5.36
3125 4976 3.096092 ACAAGTTGACAGAAAAGGGCAA 58.904 40.909 10.54 0.00 0.00 4.52
3126 4977 3.119137 ACAAGTTGACAGAAAAGGGCAAC 60.119 43.478 10.54 2.99 39.17 4.17
3127 4978 2.733956 AGTTGACAGAAAAGGGCAACA 58.266 42.857 13.03 0.00 40.80 3.33
3128 4979 3.096092 AGTTGACAGAAAAGGGCAACAA 58.904 40.909 13.03 0.00 40.80 2.83
3129 4980 3.513515 AGTTGACAGAAAAGGGCAACAAA 59.486 39.130 13.03 0.00 40.80 2.83
3130 4981 4.020662 AGTTGACAGAAAAGGGCAACAAAA 60.021 37.500 13.03 0.00 40.80 2.44
3131 4982 4.751767 TGACAGAAAAGGGCAACAAAAT 57.248 36.364 0.00 0.00 39.74 1.82
3132 4983 4.440880 TGACAGAAAAGGGCAACAAAATG 58.559 39.130 0.00 0.00 39.74 2.32
3374 5244 2.037251 ACCATATCTGCACCGACCATAC 59.963 50.000 0.00 0.00 0.00 2.39
3383 5253 1.066502 CACCGACCATACCATGACACA 60.067 52.381 0.00 0.00 0.00 3.72
3645 5525 2.794981 CGTAGCACCACCATCGAAGTAG 60.795 54.545 0.00 0.00 0.00 2.57
3656 5537 6.447162 CACCATCGAAGTAGCTCATGTATTA 58.553 40.000 0.00 0.00 0.00 0.98
3749 5633 5.375417 TCAAGACGTCGTCCATAGTTTTA 57.625 39.130 21.40 0.00 32.18 1.52
3775 5659 1.078918 CCGCAGAAGTCAGCCATCA 60.079 57.895 0.00 0.00 0.00 3.07
3840 5724 1.647545 CCGTCGTGGAGCCGTAGTAA 61.648 60.000 0.00 0.00 42.00 2.24
3872 5757 2.124236 ACCACCAAACGGCCGAAA 60.124 55.556 35.90 0.00 0.00 3.46
3887 5772 1.858091 CGAAAGGATCTGGATCACCG 58.142 55.000 11.93 6.04 39.54 4.94
3925 5810 1.421268 TCTGAGTCAAGGCAACCATGT 59.579 47.619 0.00 0.00 37.17 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 0.961753 GTTTGGTTTGGAGCCCTGAG 59.038 55.000 0.00 0.00 0.00 3.35
13 14 0.260230 TGTTTGGTTTGGAGCCCTGA 59.740 50.000 0.00 0.00 0.00 3.86
14 15 0.675633 CTGTTTGGTTTGGAGCCCTG 59.324 55.000 0.00 0.00 0.00 4.45
15 16 1.115326 GCTGTTTGGTTTGGAGCCCT 61.115 55.000 0.00 0.00 0.00 5.19
16 17 1.367471 GCTGTTTGGTTTGGAGCCC 59.633 57.895 0.00 0.00 0.00 5.19
17 18 1.367471 GGCTGTTTGGTTTGGAGCC 59.633 57.895 0.00 0.00 42.37 4.70
18 19 0.032540 CAGGCTGTTTGGTTTGGAGC 59.967 55.000 6.28 0.00 0.00 4.70
19 20 1.402787 ACAGGCTGTTTGGTTTGGAG 58.597 50.000 15.88 0.00 0.00 3.86
20 21 2.738587 TACAGGCTGTTTGGTTTGGA 57.261 45.000 27.24 0.37 0.00 3.53
21 22 2.955660 TCTTACAGGCTGTTTGGTTTGG 59.044 45.455 27.24 7.37 0.00 3.28
22 23 4.359706 GTTCTTACAGGCTGTTTGGTTTG 58.640 43.478 27.24 8.39 0.00 2.93
23 24 3.383505 GGTTCTTACAGGCTGTTTGGTTT 59.616 43.478 27.24 0.39 0.00 3.27
24 25 2.956333 GGTTCTTACAGGCTGTTTGGTT 59.044 45.455 27.24 1.24 0.00 3.67
25 26 2.583143 GGTTCTTACAGGCTGTTTGGT 58.417 47.619 27.24 2.08 0.00 3.67
26 27 1.886542 GGGTTCTTACAGGCTGTTTGG 59.113 52.381 27.24 15.52 0.00 3.28
27 28 2.863809 AGGGTTCTTACAGGCTGTTTG 58.136 47.619 27.24 18.09 0.00 2.93
28 29 3.595190 AAGGGTTCTTACAGGCTGTTT 57.405 42.857 27.24 8.35 0.00 2.83
29 30 3.595190 AAAGGGTTCTTACAGGCTGTT 57.405 42.857 27.24 10.10 32.01 3.16
30 31 3.117663 TGAAAAGGGTTCTTACAGGCTGT 60.118 43.478 25.34 25.34 32.01 4.40
31 32 3.253432 GTGAAAAGGGTTCTTACAGGCTG 59.747 47.826 14.16 14.16 32.01 4.85
32 33 3.487372 GTGAAAAGGGTTCTTACAGGCT 58.513 45.455 0.00 0.00 32.01 4.58
33 34 2.557056 GGTGAAAAGGGTTCTTACAGGC 59.443 50.000 0.00 0.00 32.01 4.85
34 35 3.827722 TGGTGAAAAGGGTTCTTACAGG 58.172 45.455 0.00 0.00 32.01 4.00
35 36 5.845391 TTTGGTGAAAAGGGTTCTTACAG 57.155 39.130 0.00 0.00 32.01 2.74
36 37 5.480772 TGTTTTGGTGAAAAGGGTTCTTACA 59.519 36.000 0.00 0.00 31.57 2.41
37 38 5.968254 TGTTTTGGTGAAAAGGGTTCTTAC 58.032 37.500 0.00 0.00 31.57 2.34
38 39 6.607004 TTGTTTTGGTGAAAAGGGTTCTTA 57.393 33.333 0.00 0.00 31.57 2.10
39 40 5.491323 TTGTTTTGGTGAAAAGGGTTCTT 57.509 34.783 0.00 0.00 31.57 2.52
40 41 5.692115 ATTGTTTTGGTGAAAAGGGTTCT 57.308 34.783 0.00 0.00 31.57 3.01
41 42 5.448496 GCAATTGTTTTGGTGAAAAGGGTTC 60.448 40.000 7.40 0.00 31.57 3.62
42 43 4.397730 GCAATTGTTTTGGTGAAAAGGGTT 59.602 37.500 7.40 0.00 31.57 4.11
43 44 3.944650 GCAATTGTTTTGGTGAAAAGGGT 59.055 39.130 7.40 0.00 31.57 4.34
44 45 3.314913 GGCAATTGTTTTGGTGAAAAGGG 59.685 43.478 7.40 0.00 31.57 3.95
45 46 4.198530 AGGCAATTGTTTTGGTGAAAAGG 58.801 39.130 7.40 0.00 31.57 3.11
46 47 5.585844 AGAAGGCAATTGTTTTGGTGAAAAG 59.414 36.000 7.40 0.00 31.57 2.27
47 48 5.495640 AGAAGGCAATTGTTTTGGTGAAAA 58.504 33.333 7.40 0.00 0.00 2.29
48 49 5.096443 AGAAGGCAATTGTTTTGGTGAAA 57.904 34.783 7.40 0.00 0.00 2.69
49 50 4.751767 AGAAGGCAATTGTTTTGGTGAA 57.248 36.364 7.40 0.00 0.00 3.18
50 51 5.860941 TTAGAAGGCAATTGTTTTGGTGA 57.139 34.783 7.40 0.00 0.00 4.02
51 52 6.222389 TCATTAGAAGGCAATTGTTTTGGTG 58.778 36.000 7.40 0.00 0.00 4.17
52 53 6.418057 TCATTAGAAGGCAATTGTTTTGGT 57.582 33.333 7.40 0.00 0.00 3.67
53 54 7.727331 TTTCATTAGAAGGCAATTGTTTTGG 57.273 32.000 7.40 0.00 34.71 3.28
56 57 9.341078 ACAAATTTCATTAGAAGGCAATTGTTT 57.659 25.926 7.40 2.19 34.71 2.83
57 58 8.907222 ACAAATTTCATTAGAAGGCAATTGTT 57.093 26.923 7.40 0.00 34.71 2.83
58 59 8.776470 CAACAAATTTCATTAGAAGGCAATTGT 58.224 29.630 7.40 0.00 34.71 2.71
59 60 8.776470 ACAACAAATTTCATTAGAAGGCAATTG 58.224 29.630 0.00 0.00 34.71 2.32
60 61 8.907222 ACAACAAATTTCATTAGAAGGCAATT 57.093 26.923 0.00 0.00 34.71 2.32
61 62 8.149647 TGACAACAAATTTCATTAGAAGGCAAT 58.850 29.630 0.00 0.00 34.71 3.56
62 63 7.495901 TGACAACAAATTTCATTAGAAGGCAA 58.504 30.769 0.00 0.00 34.71 4.52
63 64 7.048629 TGACAACAAATTTCATTAGAAGGCA 57.951 32.000 0.00 0.00 34.71 4.75
64 65 7.945033 TTGACAACAAATTTCATTAGAAGGC 57.055 32.000 0.00 0.00 32.28 4.35
65 66 8.764287 GGTTTGACAACAAATTTCATTAGAAGG 58.236 33.333 0.00 0.00 45.71 3.46
66 67 9.533253 AGGTTTGACAACAAATTTCATTAGAAG 57.467 29.630 0.00 0.00 45.71 2.85
67 68 9.883142 AAGGTTTGACAACAAATTTCATTAGAA 57.117 25.926 0.00 0.00 45.71 2.10
68 69 9.883142 AAAGGTTTGACAACAAATTTCATTAGA 57.117 25.926 0.00 0.00 45.71 2.10
71 72 9.665719 AGTAAAGGTTTGACAACAAATTTCATT 57.334 25.926 0.00 0.00 45.71 2.57
73 74 9.575783 GTAGTAAAGGTTTGACAACAAATTTCA 57.424 29.630 0.00 0.00 45.71 2.69
74 75 9.027129 GGTAGTAAAGGTTTGACAACAAATTTC 57.973 33.333 0.00 0.00 45.71 2.17
75 76 8.532819 TGGTAGTAAAGGTTTGACAACAAATTT 58.467 29.630 0.00 0.00 45.71 1.82
76 77 8.068892 TGGTAGTAAAGGTTTGACAACAAATT 57.931 30.769 0.00 0.00 45.71 1.82
77 78 7.558444 TCTGGTAGTAAAGGTTTGACAACAAAT 59.442 33.333 0.00 0.00 45.71 2.32
78 79 6.885376 TCTGGTAGTAAAGGTTTGACAACAAA 59.115 34.615 0.00 0.00 42.66 2.83
79 80 6.416415 TCTGGTAGTAAAGGTTTGACAACAA 58.584 36.000 0.00 0.00 34.15 2.83
80 81 5.991861 TCTGGTAGTAAAGGTTTGACAACA 58.008 37.500 0.00 0.00 34.15 3.33
81 82 5.049612 GCTCTGGTAGTAAAGGTTTGACAAC 60.050 44.000 0.00 0.00 0.00 3.32
82 83 5.061179 GCTCTGGTAGTAAAGGTTTGACAA 58.939 41.667 0.00 0.00 0.00 3.18
83 84 4.101898 TGCTCTGGTAGTAAAGGTTTGACA 59.898 41.667 0.00 0.00 0.00 3.58
84 85 4.638304 TGCTCTGGTAGTAAAGGTTTGAC 58.362 43.478 0.00 0.00 0.00 3.18
85 86 4.591498 TCTGCTCTGGTAGTAAAGGTTTGA 59.409 41.667 0.00 0.00 0.00 2.69
86 87 4.691216 GTCTGCTCTGGTAGTAAAGGTTTG 59.309 45.833 0.00 0.00 0.00 2.93
87 88 4.347000 TGTCTGCTCTGGTAGTAAAGGTTT 59.653 41.667 0.00 0.00 0.00 3.27
88 89 3.901844 TGTCTGCTCTGGTAGTAAAGGTT 59.098 43.478 0.00 0.00 0.00 3.50
89 90 3.258622 GTGTCTGCTCTGGTAGTAAAGGT 59.741 47.826 0.00 0.00 0.00 3.50
90 91 3.368531 GGTGTCTGCTCTGGTAGTAAAGG 60.369 52.174 0.00 0.00 0.00 3.11
91 92 3.258372 TGGTGTCTGCTCTGGTAGTAAAG 59.742 47.826 0.00 0.00 0.00 1.85
92 93 3.236047 TGGTGTCTGCTCTGGTAGTAAA 58.764 45.455 0.00 0.00 0.00 2.01
93 94 2.884320 TGGTGTCTGCTCTGGTAGTAA 58.116 47.619 0.00 0.00 0.00 2.24
94 95 2.597578 TGGTGTCTGCTCTGGTAGTA 57.402 50.000 0.00 0.00 0.00 1.82
95 96 1.552337 CATGGTGTCTGCTCTGGTAGT 59.448 52.381 0.00 0.00 0.00 2.73
96 97 1.741732 GCATGGTGTCTGCTCTGGTAG 60.742 57.143 0.00 0.00 36.68 3.18
97 98 0.250234 GCATGGTGTCTGCTCTGGTA 59.750 55.000 0.00 0.00 36.68 3.25
98 99 1.002868 GCATGGTGTCTGCTCTGGT 60.003 57.895 0.00 0.00 36.68 4.00
99 100 1.748122 GGCATGGTGTCTGCTCTGG 60.748 63.158 0.00 0.00 39.60 3.86
100 101 0.322277 AAGGCATGGTGTCTGCTCTG 60.322 55.000 0.00 0.00 39.60 3.35
101 102 0.322277 CAAGGCATGGTGTCTGCTCT 60.322 55.000 0.00 0.00 39.60 4.09
102 103 0.321919 TCAAGGCATGGTGTCTGCTC 60.322 55.000 0.00 0.00 39.60 4.26
103 104 0.330604 ATCAAGGCATGGTGTCTGCT 59.669 50.000 0.00 0.00 39.60 4.24
104 105 1.135199 CAATCAAGGCATGGTGTCTGC 60.135 52.381 0.00 0.00 29.54 4.26
105 106 1.475280 CCAATCAAGGCATGGTGTCTG 59.525 52.381 0.00 0.00 29.54 3.51
106 107 1.843368 CCAATCAAGGCATGGTGTCT 58.157 50.000 0.00 0.00 30.81 3.41
116 117 3.815809 TCGGGTTATAAGCCAATCAAGG 58.184 45.455 28.38 13.54 46.75 3.61
117 118 6.934645 TCTAATCGGGTTATAAGCCAATCAAG 59.065 38.462 28.38 18.03 46.75 3.02
118 119 6.833041 TCTAATCGGGTTATAAGCCAATCAA 58.167 36.000 28.38 10.80 46.75 2.57
119 120 6.042781 ACTCTAATCGGGTTATAAGCCAATCA 59.957 38.462 28.38 12.70 46.75 2.57
120 121 6.465084 ACTCTAATCGGGTTATAAGCCAATC 58.535 40.000 28.38 6.55 46.75 2.67
121 122 6.435292 ACTCTAATCGGGTTATAAGCCAAT 57.565 37.500 28.38 16.68 46.75 3.16
122 123 5.508489 CGACTCTAATCGGGTTATAAGCCAA 60.508 44.000 28.38 15.10 46.75 4.52
123 124 4.022589 CGACTCTAATCGGGTTATAAGCCA 60.023 45.833 28.38 17.84 46.75 4.75
124 125 4.022503 ACGACTCTAATCGGGTTATAAGCC 60.023 45.833 21.52 21.52 46.56 4.35
125 126 5.118642 ACGACTCTAATCGGGTTATAAGC 57.881 43.478 6.10 6.10 46.56 3.09
126 127 7.749570 CACATACGACTCTAATCGGGTTATAAG 59.250 40.741 0.00 0.00 46.56 1.73
127 128 7.587629 CACATACGACTCTAATCGGGTTATAA 58.412 38.462 0.00 0.00 46.56 0.98
128 129 6.348786 GCACATACGACTCTAATCGGGTTATA 60.349 42.308 0.00 0.00 46.56 0.98
129 130 5.564259 GCACATACGACTCTAATCGGGTTAT 60.564 44.000 0.00 0.00 46.56 1.89
130 131 4.261322 GCACATACGACTCTAATCGGGTTA 60.261 45.833 0.00 0.00 46.56 2.85
131 132 3.490419 GCACATACGACTCTAATCGGGTT 60.490 47.826 0.00 0.00 46.56 4.11
132 133 2.034305 GCACATACGACTCTAATCGGGT 59.966 50.000 0.00 0.00 46.56 5.28
133 134 2.607282 GGCACATACGACTCTAATCGGG 60.607 54.545 0.00 0.00 46.56 5.14
134 135 2.293677 AGGCACATACGACTCTAATCGG 59.706 50.000 0.00 0.00 46.56 4.18
136 137 4.933330 TCAAGGCACATACGACTCTAATC 58.067 43.478 0.00 0.00 0.00 1.75
137 138 5.537300 ATCAAGGCACATACGACTCTAAT 57.463 39.130 0.00 0.00 0.00 1.73
138 139 5.109210 CAATCAAGGCACATACGACTCTAA 58.891 41.667 0.00 0.00 0.00 2.10
139 140 4.441495 CCAATCAAGGCACATACGACTCTA 60.441 45.833 0.00 0.00 0.00 2.43
140 141 3.525537 CAATCAAGGCACATACGACTCT 58.474 45.455 0.00 0.00 0.00 3.24
141 142 2.609459 CCAATCAAGGCACATACGACTC 59.391 50.000 0.00 0.00 0.00 3.36
142 143 2.632377 CCAATCAAGGCACATACGACT 58.368 47.619 0.00 0.00 0.00 4.18
153 154 9.730705 TCTAATCAGATTATAAGCCAATCAAGG 57.269 33.333 3.19 0.00 35.30 3.61
156 157 9.935241 GACTCTAATCAGATTATAAGCCAATCA 57.065 33.333 3.19 0.00 35.30 2.57
157 158 9.081997 CGACTCTAATCAGATTATAAGCCAATC 57.918 37.037 3.19 0.00 33.43 2.67
158 159 8.589338 ACGACTCTAATCAGATTATAAGCCAAT 58.411 33.333 3.19 0.00 0.00 3.16
159 160 7.952671 ACGACTCTAATCAGATTATAAGCCAA 58.047 34.615 3.19 0.00 0.00 4.52
160 161 7.526142 ACGACTCTAATCAGATTATAAGCCA 57.474 36.000 3.19 0.00 0.00 4.75
161 162 9.509855 CATACGACTCTAATCAGATTATAAGCC 57.490 37.037 3.19 0.00 0.00 4.35
164 165 9.841880 GCACATACGACTCTAATCAGATTATAA 57.158 33.333 3.19 0.00 0.00 0.98
165 166 8.459635 GGCACATACGACTCTAATCAGATTATA 58.540 37.037 3.19 0.00 0.00 0.98
166 167 7.177568 AGGCACATACGACTCTAATCAGATTAT 59.822 37.037 3.19 0.00 0.00 1.28
167 168 6.490381 AGGCACATACGACTCTAATCAGATTA 59.510 38.462 2.77 2.77 0.00 1.75
168 169 5.303078 AGGCACATACGACTCTAATCAGATT 59.697 40.000 0.20 0.20 0.00 2.40
169 170 4.830046 AGGCACATACGACTCTAATCAGAT 59.170 41.667 0.00 0.00 0.00 2.90
170 171 4.207955 AGGCACATACGACTCTAATCAGA 58.792 43.478 0.00 0.00 0.00 3.27
171 172 4.576216 AGGCACATACGACTCTAATCAG 57.424 45.455 0.00 0.00 0.00 2.90
172 173 4.401202 TCAAGGCACATACGACTCTAATCA 59.599 41.667 0.00 0.00 0.00 2.57
173 174 4.933330 TCAAGGCACATACGACTCTAATC 58.067 43.478 0.00 0.00 0.00 1.75
174 175 5.537300 ATCAAGGCACATACGACTCTAAT 57.463 39.130 0.00 0.00 0.00 1.73
175 176 5.109210 CAATCAAGGCACATACGACTCTAA 58.891 41.667 0.00 0.00 0.00 2.10
176 177 4.441495 CCAATCAAGGCACATACGACTCTA 60.441 45.833 0.00 0.00 0.00 2.43
177 178 3.525537 CAATCAAGGCACATACGACTCT 58.474 45.455 0.00 0.00 0.00 3.24
178 179 2.609459 CCAATCAAGGCACATACGACTC 59.391 50.000 0.00 0.00 0.00 3.36
179 180 2.632377 CCAATCAAGGCACATACGACT 58.368 47.619 0.00 0.00 0.00 4.18
190 191 6.966534 AATCAGGTTATAAGCCAATCAAGG 57.033 37.500 10.99 0.00 0.00 3.61
191 192 8.908786 TCTAATCAGGTTATAAGCCAATCAAG 57.091 34.615 10.99 6.86 0.00 3.02
192 193 8.494433 ACTCTAATCAGGTTATAAGCCAATCAA 58.506 33.333 10.99 0.00 0.00 2.57
193 194 8.034313 ACTCTAATCAGGTTATAAGCCAATCA 57.966 34.615 10.99 0.00 0.00 2.57
194 195 7.329717 CGACTCTAATCAGGTTATAAGCCAATC 59.670 40.741 10.99 0.00 0.00 2.67
195 196 7.155328 CGACTCTAATCAGGTTATAAGCCAAT 58.845 38.462 10.99 2.72 0.00 3.16
196 197 6.097839 ACGACTCTAATCAGGTTATAAGCCAA 59.902 38.462 10.99 0.36 0.00 4.52
197 198 5.597182 ACGACTCTAATCAGGTTATAAGCCA 59.403 40.000 10.99 0.00 0.00 4.75
198 199 6.086785 ACGACTCTAATCAGGTTATAAGCC 57.913 41.667 10.99 3.83 0.00 4.35
199 200 8.298140 ACATACGACTCTAATCAGGTTATAAGC 58.702 37.037 6.56 6.56 0.00 3.09
200 201 9.613957 CACATACGACTCTAATCAGGTTATAAG 57.386 37.037 0.00 0.00 0.00 1.73
201 202 8.080417 GCACATACGACTCTAATCAGGTTATAA 58.920 37.037 0.00 0.00 0.00 0.98
202 203 7.309012 GGCACATACGACTCTAATCAGGTTATA 60.309 40.741 0.00 0.00 0.00 0.98
203 204 6.448006 GCACATACGACTCTAATCAGGTTAT 58.552 40.000 0.00 0.00 0.00 1.89
204 205 5.221185 GGCACATACGACTCTAATCAGGTTA 60.221 44.000 0.00 0.00 0.00 2.85
205 206 4.441634 GGCACATACGACTCTAATCAGGTT 60.442 45.833 0.00 0.00 0.00 3.50
206 207 3.068307 GGCACATACGACTCTAATCAGGT 59.932 47.826 0.00 0.00 0.00 4.00
207 208 3.319405 AGGCACATACGACTCTAATCAGG 59.681 47.826 0.00 0.00 0.00 3.86
208 209 4.576216 AGGCACATACGACTCTAATCAG 57.424 45.455 0.00 0.00 0.00 2.90
209 210 4.401202 TCAAGGCACATACGACTCTAATCA 59.599 41.667 0.00 0.00 0.00 2.57
210 211 4.933330 TCAAGGCACATACGACTCTAATC 58.067 43.478 0.00 0.00 0.00 1.75
211 212 5.537300 ATCAAGGCACATACGACTCTAAT 57.463 39.130 0.00 0.00 0.00 1.73
212 213 5.109210 CAATCAAGGCACATACGACTCTAA 58.891 41.667 0.00 0.00 0.00 2.10
213 214 4.441495 CCAATCAAGGCACATACGACTCTA 60.441 45.833 0.00 0.00 0.00 2.43
214 215 3.525537 CAATCAAGGCACATACGACTCT 58.474 45.455 0.00 0.00 0.00 3.24
215 216 2.609459 CCAATCAAGGCACATACGACTC 59.391 50.000 0.00 0.00 0.00 3.36
216 217 2.632377 CCAATCAAGGCACATACGACT 58.368 47.619 0.00 0.00 0.00 4.18
226 227 8.710980 ATAATCGGGTTATAAGCCAATCAAGGC 61.711 40.741 28.38 0.00 46.75 4.35
227 228 3.815809 TCGGGTTATAAGCCAATCAAGG 58.184 45.455 28.38 13.54 46.75 3.61
228 229 7.687941 ATAATCGGGTTATAAGCCAATCAAG 57.312 36.000 28.38 14.15 46.75 3.02
280 281 7.500141 AGTGTGGCTTTGTATTTCAGATTTTT 58.500 30.769 0.00 0.00 0.00 1.94
281 282 7.014615 AGAGTGTGGCTTTGTATTTCAGATTTT 59.985 33.333 0.00 0.00 0.00 1.82
282 283 6.491403 AGAGTGTGGCTTTGTATTTCAGATTT 59.509 34.615 0.00 0.00 0.00 2.17
283 284 6.006449 AGAGTGTGGCTTTGTATTTCAGATT 58.994 36.000 0.00 0.00 0.00 2.40
284 285 5.564550 AGAGTGTGGCTTTGTATTTCAGAT 58.435 37.500 0.00 0.00 0.00 2.90
298 299 6.657966 AGGTTAATTAAGGTTTAGAGTGTGGC 59.342 38.462 0.00 0.00 0.00 5.01
317 318 8.080417 GCACATACGACTCTATAATCAGGTTAA 58.920 37.037 0.00 0.00 0.00 2.01
318 319 7.309012 GGCACATACGACTCTATAATCAGGTTA 60.309 40.741 0.00 0.00 0.00 2.85
319 320 6.448006 GCACATACGACTCTATAATCAGGTT 58.552 40.000 0.00 0.00 0.00 3.50
320 321 5.047943 GGCACATACGACTCTATAATCAGGT 60.048 44.000 0.00 0.00 0.00 4.00
323 324 6.650427 AAGGCACATACGACTCTATAATCA 57.350 37.500 0.00 0.00 0.00 2.57
335 336 8.514136 TTTCTTCAAATTTTAAGGCACATACG 57.486 30.769 11.28 0.00 0.00 3.06
361 362 6.462207 CCCCACTGTTCACACATTTTTCAATA 60.462 38.462 0.00 0.00 30.39 1.90
362 363 5.358922 CCCACTGTTCACACATTTTTCAAT 58.641 37.500 0.00 0.00 30.39 2.57
370 371 1.425066 ACATCCCCACTGTTCACACAT 59.575 47.619 0.00 0.00 30.39 3.21
371 372 0.843309 ACATCCCCACTGTTCACACA 59.157 50.000 0.00 0.00 0.00 3.72
372 373 1.981256 AACATCCCCACTGTTCACAC 58.019 50.000 0.00 0.00 31.29 3.82
380 381 1.825474 CAGACTCGTAACATCCCCACT 59.175 52.381 0.00 0.00 0.00 4.00
381 382 1.134788 CCAGACTCGTAACATCCCCAC 60.135 57.143 0.00 0.00 0.00 4.61
394 395 1.239347 GTTTGCAGGTTCCCAGACTC 58.761 55.000 0.00 0.00 0.00 3.36
397 398 2.238521 GAATGTTTGCAGGTTCCCAGA 58.761 47.619 0.00 0.00 0.00 3.86
398 399 1.962807 TGAATGTTTGCAGGTTCCCAG 59.037 47.619 0.00 0.00 0.00 4.45
408 409 9.532697 GAAATTGTCATATTGTTGAATGTTTGC 57.467 29.630 0.00 0.00 0.00 3.68
471 476 7.771183 AGAAACTGTGCAAAAATAACAAGAGA 58.229 30.769 0.00 0.00 0.00 3.10
605 627 1.000607 TGCTTGAGGTACAGTGTCGAC 60.001 52.381 9.11 9.11 0.00 4.20
608 630 2.143925 GGTTGCTTGAGGTACAGTGTC 58.856 52.381 0.00 0.00 0.00 3.67
622 644 0.885879 CATGAGTGCATGTGGTTGCT 59.114 50.000 0.00 0.00 45.41 3.91
632 654 1.608055 CCTCCAACAACATGAGTGCA 58.392 50.000 0.00 0.00 0.00 4.57
633 655 0.883833 CCCTCCAACAACATGAGTGC 59.116 55.000 0.00 0.00 0.00 4.40
637 659 3.497763 CCAACTACCCTCCAACAACATGA 60.498 47.826 0.00 0.00 0.00 3.07
654 677 3.056607 GCTTACATTGCATTGACCCAACT 60.057 43.478 15.20 0.00 0.00 3.16
656 679 2.094803 CGCTTACATTGCATTGACCCAA 60.095 45.455 15.20 3.42 0.00 4.12
677 704 1.529309 GATGCCTCCTCCAACCTCC 59.471 63.158 0.00 0.00 0.00 4.30
689 716 1.115467 CTTAGACTGGGACGATGCCT 58.885 55.000 0.00 0.00 0.00 4.75
690 717 0.105039 CCTTAGACTGGGACGATGCC 59.895 60.000 0.00 0.00 0.00 4.40
691 718 0.530870 GCCTTAGACTGGGACGATGC 60.531 60.000 0.00 0.00 0.00 3.91
706 735 3.011032 AGAGATTTGACCCTTCATGCCTT 59.989 43.478 0.00 0.00 0.00 4.35
709 738 4.036144 GCTAAGAGATTTGACCCTTCATGC 59.964 45.833 0.00 0.00 0.00 4.06
711 740 4.080863 ACGCTAAGAGATTTGACCCTTCAT 60.081 41.667 0.00 0.00 0.00 2.57
763 792 0.875059 GTTCAAGCCCACACTAGTGC 59.125 55.000 22.90 8.83 44.53 4.40
767 797 3.389983 AGTAGTTGTTCAAGCCCACACTA 59.610 43.478 0.00 0.00 0.00 2.74
775 805 3.477530 ACCTGGAAGTAGTTGTTCAAGC 58.522 45.455 0.00 0.00 0.00 4.01
794 953 4.575885 TGCTTACTGGATTAGTTGTGACC 58.424 43.478 0.00 0.00 40.89 4.02
807 966 7.276438 GCTTTTGGATTAGATTTTGCTTACTGG 59.724 37.037 0.00 0.00 0.00 4.00
812 971 7.489113 CGTATGCTTTTGGATTAGATTTTGCTT 59.511 33.333 0.00 0.00 0.00 3.91
887 1085 2.005537 CGCTCAAAACAGCACACGC 61.006 57.895 0.00 0.00 39.62 5.34
888 1086 1.369209 CCGCTCAAAACAGCACACG 60.369 57.895 0.00 0.00 39.62 4.49
928 1126 4.113354 GGAGGATGTTTAAGTAGTCAGCG 58.887 47.826 0.00 0.00 0.00 5.18
934 1132 5.983540 AGCTGAAGGAGGATGTTTAAGTAG 58.016 41.667 0.00 0.00 0.00 2.57
991 1200 1.608590 AGAGGACGCCATTGTTGTTTG 59.391 47.619 0.00 0.00 0.00 2.93
992 1201 1.608590 CAGAGGACGCCATTGTTGTTT 59.391 47.619 0.00 0.00 0.00 2.83
1008 1217 2.291741 GCCTGGAAACAAGACAACAGAG 59.708 50.000 0.00 0.00 42.06 3.35
1013 1222 3.030291 ACAATGCCTGGAAACAAGACAA 58.970 40.909 0.00 0.00 42.06 3.18
1030 1239 4.322057 AGAGGCATAGGAACCAAACAAT 57.678 40.909 0.00 0.00 0.00 2.71
1254 1463 0.254178 GGCCTGAGATGCCTTCTGAA 59.746 55.000 0.00 0.00 45.70 3.02
1607 3458 3.976015 ACAAGGTTGTTCTTTTGGAGGA 58.024 40.909 0.00 0.00 38.47 3.71
1778 3629 8.119246 AGATATGACCTAAGCTGTCTGGTATAT 58.881 37.037 4.51 0.33 33.83 0.86
1824 3675 3.502191 GACAAGTTGTTGGCTGTCAAA 57.498 42.857 10.45 0.00 38.85 2.69
1849 3700 2.027745 TGAAGAGAGATGGTGGAACTGC 60.028 50.000 0.00 0.00 36.74 4.40
1882 3733 1.804151 TGCTACGCCAAGAAATGTCAC 59.196 47.619 0.00 0.00 0.00 3.67
2269 4120 5.455469 GCCCTGAAATTTGGTTTTCCCTTAA 60.455 40.000 0.00 0.00 39.73 1.85
2289 4140 0.941963 TCTCTGGTGGTATAGGCCCT 59.058 55.000 0.00 0.00 0.00 5.19
2405 4256 4.275196 GTCTGTTTTGTCCAAAGGGTAGAC 59.725 45.833 0.00 0.00 34.93 2.59
2410 4261 3.023832 ACAGTCTGTTTTGTCCAAAGGG 58.976 45.455 0.00 0.00 0.00 3.95
2417 4268 1.604278 GCCCTGACAGTCTGTTTTGTC 59.396 52.381 7.00 0.00 43.07 3.18
2520 4371 8.375506 TGGAGTTGATTACAATGTCCTATATCC 58.624 37.037 0.00 0.00 40.06 2.59
2906 4757 2.245159 TCCTTCAACTGACACTGCAG 57.755 50.000 13.48 13.48 41.63 4.41
2998 4849 2.642139 AGAGCCGATGCATTTTGTTG 57.358 45.000 0.00 0.00 41.13 3.33
3007 4858 5.266242 CAGTATTGTTAAAAGAGCCGATGC 58.734 41.667 0.00 0.00 37.95 3.91
3018 4869 4.819088 TGACACTGCAGCAGTATTGTTAAA 59.181 37.500 27.80 9.10 43.43 1.52
3019 4870 4.384940 TGACACTGCAGCAGTATTGTTAA 58.615 39.130 27.80 11.34 43.43 2.01
3020 4871 3.996363 CTGACACTGCAGCAGTATTGTTA 59.004 43.478 27.80 16.60 43.43 2.41
3021 4872 2.810274 CTGACACTGCAGCAGTATTGTT 59.190 45.455 27.80 9.82 43.43 2.83
3022 4873 2.224378 ACTGACACTGCAGCAGTATTGT 60.224 45.455 27.80 20.95 43.43 2.71
3023 4874 2.420642 ACTGACACTGCAGCAGTATTG 58.579 47.619 27.80 17.83 43.43 1.90
3024 4875 2.810274 CAACTGACACTGCAGCAGTATT 59.190 45.455 27.80 17.47 43.43 1.89
3025 4876 2.037641 TCAACTGACACTGCAGCAGTAT 59.962 45.455 27.80 18.21 43.43 2.12
3026 4877 1.412343 TCAACTGACACTGCAGCAGTA 59.588 47.619 27.80 11.96 43.43 2.74
3027 4878 0.178767 TCAACTGACACTGCAGCAGT 59.821 50.000 23.11 23.11 46.51 4.40
3028 4879 1.263484 CTTCAACTGACACTGCAGCAG 59.737 52.381 21.54 21.54 39.51 4.24
3029 4880 1.302366 CTTCAACTGACACTGCAGCA 58.698 50.000 15.27 2.62 39.51 4.41
3030 4881 0.590195 CCTTCAACTGACACTGCAGC 59.410 55.000 15.27 0.00 39.51 5.25
3031 4882 2.245159 TCCTTCAACTGACACTGCAG 57.755 50.000 13.48 13.48 41.63 4.41
3032 4883 2.708216 TTCCTTCAACTGACACTGCA 57.292 45.000 0.00 0.00 0.00 4.41
3033 4884 3.565482 TGATTTCCTTCAACTGACACTGC 59.435 43.478 0.00 0.00 0.00 4.40
3034 4885 5.471116 TCATGATTTCCTTCAACTGACACTG 59.529 40.000 0.00 0.00 0.00 3.66
3035 4886 5.624159 TCATGATTTCCTTCAACTGACACT 58.376 37.500 0.00 0.00 0.00 3.55
3036 4887 5.947228 TCATGATTTCCTTCAACTGACAC 57.053 39.130 0.00 0.00 0.00 3.67
3037 4888 7.014518 ACAAATCATGATTTCCTTCAACTGACA 59.985 33.333 27.08 0.00 38.84 3.58
3038 4889 7.327761 CACAAATCATGATTTCCTTCAACTGAC 59.672 37.037 27.08 0.00 38.84 3.51
3039 4890 7.014518 ACACAAATCATGATTTCCTTCAACTGA 59.985 33.333 27.08 0.00 38.84 3.41
3040 4891 7.149973 ACACAAATCATGATTTCCTTCAACTG 58.850 34.615 27.08 17.16 38.84 3.16
3041 4892 7.294017 ACACAAATCATGATTTCCTTCAACT 57.706 32.000 27.08 4.35 38.84 3.16
3042 4893 7.542130 GGTACACAAATCATGATTTCCTTCAAC 59.458 37.037 27.08 19.27 38.84 3.18
3043 4894 7.232330 TGGTACACAAATCATGATTTCCTTCAA 59.768 33.333 27.08 10.84 38.84 2.69
3044 4895 6.718912 TGGTACACAAATCATGATTTCCTTCA 59.281 34.615 27.08 17.81 38.84 3.02
3045 4896 7.156876 TGGTACACAAATCATGATTTCCTTC 57.843 36.000 27.08 16.79 38.84 3.46
3046 4897 6.350445 GCTGGTACACAAATCATGATTTCCTT 60.350 38.462 27.08 16.99 38.84 3.36
3047 4898 5.126061 GCTGGTACACAAATCATGATTTCCT 59.874 40.000 27.08 14.56 38.84 3.36
3048 4899 5.105797 TGCTGGTACACAAATCATGATTTCC 60.106 40.000 27.08 23.60 38.84 3.13
3049 4900 5.953183 TGCTGGTACACAAATCATGATTTC 58.047 37.500 27.08 16.78 38.84 2.17
3050 4901 5.981088 TGCTGGTACACAAATCATGATTT 57.019 34.783 24.83 24.83 41.33 2.17
3051 4902 6.406177 GGAATGCTGGTACACAAATCATGATT 60.406 38.462 15.36 15.36 0.00 2.57
3052 4903 5.068198 GGAATGCTGGTACACAAATCATGAT 59.932 40.000 1.18 1.18 0.00 2.45
3053 4904 4.398988 GGAATGCTGGTACACAAATCATGA 59.601 41.667 0.00 0.00 0.00 3.07
3054 4905 4.158209 TGGAATGCTGGTACACAAATCATG 59.842 41.667 0.00 0.00 0.00 3.07
3055 4906 4.343231 TGGAATGCTGGTACACAAATCAT 58.657 39.130 0.00 0.00 0.00 2.45
3056 4907 3.760738 TGGAATGCTGGTACACAAATCA 58.239 40.909 0.00 0.00 0.00 2.57
3057 4908 4.022416 TGTTGGAATGCTGGTACACAAATC 60.022 41.667 0.00 0.00 0.00 2.17
3058 4909 3.894427 TGTTGGAATGCTGGTACACAAAT 59.106 39.130 0.00 0.00 0.00 2.32
3059 4910 3.291584 TGTTGGAATGCTGGTACACAAA 58.708 40.909 0.00 0.00 0.00 2.83
3060 4911 2.884012 CTGTTGGAATGCTGGTACACAA 59.116 45.455 0.00 0.00 0.00 3.33
3061 4912 2.503331 CTGTTGGAATGCTGGTACACA 58.497 47.619 0.00 0.00 0.00 3.72
3062 4913 1.812571 CCTGTTGGAATGCTGGTACAC 59.187 52.381 0.00 0.00 34.57 2.90
3063 4914 1.702401 TCCTGTTGGAATGCTGGTACA 59.298 47.619 0.00 0.00 39.87 2.90
3064 4915 2.359900 CTCCTGTTGGAATGCTGGTAC 58.640 52.381 0.00 0.00 42.66 3.34
3065 4916 1.281867 CCTCCTGTTGGAATGCTGGTA 59.718 52.381 0.00 0.00 42.66 3.25
3066 4917 0.038744 CCTCCTGTTGGAATGCTGGT 59.961 55.000 0.00 0.00 42.66 4.00
3067 4918 0.038744 ACCTCCTGTTGGAATGCTGG 59.961 55.000 0.00 0.00 42.66 4.85
3068 4919 2.787473 TACCTCCTGTTGGAATGCTG 57.213 50.000 0.00 0.00 42.66 4.41
3069 4920 3.136626 GGTATACCTCCTGTTGGAATGCT 59.863 47.826 15.09 0.00 42.66 3.79
3070 4921 3.136626 AGGTATACCTCCTGTTGGAATGC 59.863 47.826 19.27 0.00 44.77 3.56
3083 4934 6.182507 TGTGTTGAACAAAGAGGTATACCT 57.817 37.500 24.84 24.84 42.38 3.08
3084 4935 6.870971 TTGTGTTGAACAAAGAGGTATACC 57.129 37.500 14.54 14.54 45.85 2.73
3101 4952 3.119137 GCCCTTTTCTGTCAACTTGTGTT 60.119 43.478 0.00 0.00 36.75 3.32
3102 4953 2.427095 GCCCTTTTCTGTCAACTTGTGT 59.573 45.455 0.00 0.00 0.00 3.72
3103 4954 2.426738 TGCCCTTTTCTGTCAACTTGTG 59.573 45.455 0.00 0.00 0.00 3.33
3104 4955 2.733956 TGCCCTTTTCTGTCAACTTGT 58.266 42.857 0.00 0.00 0.00 3.16
3105 4956 3.119173 TGTTGCCCTTTTCTGTCAACTTG 60.119 43.478 0.00 0.00 38.19 3.16
3106 4957 3.096092 TGTTGCCCTTTTCTGTCAACTT 58.904 40.909 0.00 0.00 38.19 2.66
3107 4958 2.733956 TGTTGCCCTTTTCTGTCAACT 58.266 42.857 0.00 0.00 38.19 3.16
3108 4959 3.518634 TTGTTGCCCTTTTCTGTCAAC 57.481 42.857 0.00 0.00 37.94 3.18
3109 4960 4.543590 TTTTGTTGCCCTTTTCTGTCAA 57.456 36.364 0.00 0.00 0.00 3.18
3110 4961 4.440880 CATTTTGTTGCCCTTTTCTGTCA 58.559 39.130 0.00 0.00 0.00 3.58
3111 4962 3.248363 GCATTTTGTTGCCCTTTTCTGTC 59.752 43.478 0.00 0.00 36.60 3.51
3112 4963 3.205338 GCATTTTGTTGCCCTTTTCTGT 58.795 40.909 0.00 0.00 36.60 3.41
3113 4964 3.204526 TGCATTTTGTTGCCCTTTTCTG 58.795 40.909 0.00 0.00 42.06 3.02
3114 4965 3.557228 TGCATTTTGTTGCCCTTTTCT 57.443 38.095 0.00 0.00 42.06 2.52
3115 4966 3.376546 TGTTGCATTTTGTTGCCCTTTTC 59.623 39.130 0.00 0.00 42.06 2.29
3116 4967 3.350833 TGTTGCATTTTGTTGCCCTTTT 58.649 36.364 0.00 0.00 42.06 2.27
3117 4968 2.996631 TGTTGCATTTTGTTGCCCTTT 58.003 38.095 0.00 0.00 42.06 3.11
3118 4969 2.706339 TGTTGCATTTTGTTGCCCTT 57.294 40.000 0.00 0.00 42.06 3.95
3119 4970 2.706339 TTGTTGCATTTTGTTGCCCT 57.294 40.000 0.00 0.00 42.06 5.19
3120 4971 2.033174 CCTTTGTTGCATTTTGTTGCCC 59.967 45.455 0.00 0.00 42.06 5.36
3121 4972 2.033174 CCCTTTGTTGCATTTTGTTGCC 59.967 45.455 0.00 0.00 42.06 4.52
3122 4973 2.682352 ACCCTTTGTTGCATTTTGTTGC 59.318 40.909 0.00 0.00 43.07 4.17
3123 4974 3.065095 CCACCCTTTGTTGCATTTTGTTG 59.935 43.478 0.00 0.00 0.00 3.33
3124 4975 3.054802 TCCACCCTTTGTTGCATTTTGTT 60.055 39.130 0.00 0.00 0.00 2.83
3125 4976 2.503356 TCCACCCTTTGTTGCATTTTGT 59.497 40.909 0.00 0.00 0.00 2.83
3126 4977 3.191078 TCCACCCTTTGTTGCATTTTG 57.809 42.857 0.00 0.00 0.00 2.44
3127 4978 4.436113 AATCCACCCTTTGTTGCATTTT 57.564 36.364 0.00 0.00 0.00 1.82
3128 4979 4.436113 AAATCCACCCTTTGTTGCATTT 57.564 36.364 0.00 0.00 0.00 2.32
3129 4980 4.436113 AAAATCCACCCTTTGTTGCATT 57.564 36.364 0.00 0.00 0.00 3.56
3130 4981 5.760484 ATAAAATCCACCCTTTGTTGCAT 57.240 34.783 0.00 0.00 0.00 3.96
3131 4982 5.070981 TCAATAAAATCCACCCTTTGTTGCA 59.929 36.000 0.00 0.00 35.09 4.08
3132 4983 5.408299 GTCAATAAAATCCACCCTTTGTTGC 59.592 40.000 0.00 0.00 35.09 4.17
3319 5189 3.459232 TTGACGATCATGGATCTGGTC 57.541 47.619 4.86 6.13 36.96 4.02
3321 5191 4.194640 AGTTTTGACGATCATGGATCTGG 58.805 43.478 4.86 0.00 36.96 3.86
3391 5261 1.040646 TGCTGTTGAAGACCTCGTCT 58.959 50.000 0.00 0.00 45.64 4.18
3563 5440 2.762327 GACCGGAGTTGGTTATACCTGA 59.238 50.000 9.46 0.00 44.01 3.86
3645 5525 2.480419 GTGGTGGCGATAATACATGAGC 59.520 50.000 0.00 0.00 0.00 4.26
3656 5537 2.332654 GCGGAAAAGTGGTGGCGAT 61.333 57.895 0.00 0.00 0.00 4.58
3749 5633 0.969149 TGACTTCTGCGGTGAGATGT 59.031 50.000 5.83 0.00 34.07 3.06
3775 5659 3.486383 GAGGGTTCATCTCTCGAGATCT 58.514 50.000 17.03 3.12 45.78 2.75
3840 5724 1.276421 GGTGGTGACTATGCAGTGACT 59.724 52.381 0.00 0.00 38.76 3.41
3872 5757 1.383109 TGGCGGTGATCCAGATCCT 60.383 57.895 5.22 0.00 37.02 3.24
3887 5772 0.813821 GATCTGAAAGGCTTGGTGGC 59.186 55.000 0.00 0.00 42.15 5.01
3925 5810 2.967397 CAGCTTGGTACGACCCGA 59.033 61.111 0.00 0.00 37.50 5.14
3955 5842 2.410939 TCGTAGACGGTCGGATCTATG 58.589 52.381 1.89 0.51 40.29 2.23


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.