Multiple sequence alignment - TraesCS7A01G364000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G364000 chr7A 100.000 2294 0 0 1 2294 538377634 538379927 0.000000e+00 4237.0
1 TraesCS7A01G364000 chr7A 100.000 191 0 0 2479 2669 538380112 538380302 1.180000e-93 353.0
2 TraesCS7A01G364000 chr7A 78.161 87 17 2 2488 2573 732033685 732033600 1.000000e-03 54.7
3 TraesCS7A01G364000 chr7D 92.279 1619 68 18 273 1852 461667412 461665812 0.000000e+00 2244.0
4 TraesCS7A01G364000 chr7B 90.887 1646 89 28 268 1869 484527838 484526210 0.000000e+00 2152.0
5 TraesCS7A01G364000 chr7B 72.727 440 76 28 1868 2294 484525877 484525469 1.010000e-19 108.0
6 TraesCS7A01G364000 chr7B 80.000 115 18 5 2485 2596 43300497 43300609 2.200000e-11 80.5
7 TraesCS7A01G364000 chr5B 89.498 219 21 2 590 808 391647573 391647789 2.620000e-70 276.0
8 TraesCS7A01G364000 chr5B 78.295 129 28 0 2061 2189 325530794 325530666 1.700000e-12 84.2
9 TraesCS7A01G364000 chr5B 90.196 51 5 0 2489 2539 642305541 642305491 1.710000e-07 67.6
10 TraesCS7A01G364000 chr5D 91.667 132 11 0 593 724 334704501 334704632 1.630000e-42 183.0
11 TraesCS7A01G364000 chr5A 83.240 179 13 7 593 771 436265098 436265259 5.950000e-32 148.0
12 TraesCS7A01G364000 chr5A 74.566 173 34 6 2493 2661 623374785 623374951 1.710000e-07 67.6
13 TraesCS7A01G364000 chr1B 75.342 292 58 13 1975 2258 611778119 611777834 7.760000e-26 128.0
14 TraesCS7A01G364000 chr1A 75.362 276 57 11 1988 2255 521869825 521870097 3.610000e-24 122.0
15 TraesCS7A01G364000 chr4D 77.833 203 37 6 1987 2183 474555026 474555226 4.670000e-23 119.0
16 TraesCS7A01G364000 chr2D 73.567 314 69 13 1976 2281 423119217 423118910 1.010000e-19 108.0
17 TraesCS7A01G364000 chr2D 77.457 173 30 6 2491 2661 643292402 643292237 7.870000e-16 95.3
18 TraesCS7A01G364000 chr2A 74.654 217 45 9 1988 2199 82534602 82534391 1.320000e-13 87.9
19 TraesCS7A01G364000 chr2A 72.308 325 73 13 1973 2289 651269223 651269538 4.730000e-13 86.1
20 TraesCS7A01G364000 chr3B 71.895 306 78 6 1988 2288 486618443 486618745 6.120000e-12 82.4
21 TraesCS7A01G364000 chr3A 79.464 112 17 6 2493 2600 720592019 720591910 1.020000e-09 75.0
22 TraesCS7A01G364000 chr2B 90.741 54 5 0 2488 2541 691052584 691052531 3.690000e-09 73.1
23 TraesCS7A01G364000 chr6D 81.928 83 15 0 2491 2573 448504820 448504738 1.330000e-08 71.3
24 TraesCS7A01G364000 chr4A 92.157 51 2 2 2488 2537 473764130 473764081 1.330000e-08 71.3
25 TraesCS7A01G364000 chr6A 72.043 279 61 15 2024 2294 224275344 224275613 1.710000e-07 67.6
26 TraesCS7A01G364000 chr6B 100.000 29 0 0 87 115 678743989 678744017 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G364000 chr7A 538377634 538380302 2668 False 2295 4237 100.000 1 2669 2 chr7A.!!$F1 2668
1 TraesCS7A01G364000 chr7D 461665812 461667412 1600 True 2244 2244 92.279 273 1852 1 chr7D.!!$R1 1579
2 TraesCS7A01G364000 chr7B 484525469 484527838 2369 True 1130 2152 81.807 268 2294 2 chr7B.!!$R1 2026


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.178981 ACCCAAGTGCATGTGAGCTT 60.179 50.0 0.0 0.0 34.99 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1808 1849 0.179119 GTCGTCGGGAATTGGTCGAT 60.179 55.0 0.0 0.0 35.35 3.59 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.485463 TTTTCAGACCTCCACGAATGT 57.515 42.857 0.00 0.00 0.00 2.71
30 31 4.610605 TTTTCAGACCTCCACGAATGTA 57.389 40.909 0.00 0.00 0.00 2.29
31 32 3.587797 TTCAGACCTCCACGAATGTAC 57.412 47.619 0.00 0.00 0.00 2.90
32 33 2.521126 TCAGACCTCCACGAATGTACA 58.479 47.619 0.00 0.00 0.00 2.90
33 34 3.096852 TCAGACCTCCACGAATGTACAT 58.903 45.455 1.41 1.41 0.00 2.29
34 35 3.130516 TCAGACCTCCACGAATGTACATC 59.869 47.826 9.23 2.22 0.00 3.06
35 36 2.431057 AGACCTCCACGAATGTACATCC 59.569 50.000 9.23 0.00 0.00 3.51
36 37 2.167693 GACCTCCACGAATGTACATCCA 59.832 50.000 9.23 0.00 0.00 3.41
37 38 2.771943 ACCTCCACGAATGTACATCCAT 59.228 45.455 9.23 0.00 0.00 3.41
38 39 3.181465 ACCTCCACGAATGTACATCCATC 60.181 47.826 9.23 2.29 0.00 3.51
39 40 3.181466 CCTCCACGAATGTACATCCATCA 60.181 47.826 9.23 0.00 0.00 3.07
40 41 4.503817 CCTCCACGAATGTACATCCATCAT 60.504 45.833 9.23 0.00 0.00 2.45
41 42 4.379652 TCCACGAATGTACATCCATCATG 58.620 43.478 9.23 1.99 38.64 3.07
42 43 4.100808 TCCACGAATGTACATCCATCATGA 59.899 41.667 9.23 0.00 36.21 3.07
43 44 4.212004 CCACGAATGTACATCCATCATGAC 59.788 45.833 9.23 0.00 36.21 3.06
44 45 4.810491 CACGAATGTACATCCATCATGACA 59.190 41.667 9.23 0.00 36.21 3.58
45 46 5.467735 CACGAATGTACATCCATCATGACAT 59.532 40.000 9.23 0.00 36.01 3.06
46 47 5.698089 ACGAATGTACATCCATCATGACATC 59.302 40.000 9.23 0.00 34.65 3.06
47 48 5.930569 CGAATGTACATCCATCATGACATCT 59.069 40.000 9.23 0.00 34.65 2.90
48 49 6.128634 CGAATGTACATCCATCATGACATCTG 60.129 42.308 9.23 0.00 34.65 2.90
49 50 4.383173 TGTACATCCATCATGACATCTGC 58.617 43.478 0.00 0.00 36.21 4.26
50 51 3.570912 ACATCCATCATGACATCTGCA 57.429 42.857 0.00 0.00 36.21 4.41
51 52 4.100279 ACATCCATCATGACATCTGCAT 57.900 40.909 0.00 0.00 36.21 3.96
52 53 3.821033 ACATCCATCATGACATCTGCATG 59.179 43.478 0.00 0.00 43.39 4.06
53 54 3.570912 TCCATCATGACATCTGCATGT 57.429 42.857 0.00 0.00 46.64 3.21
54 55 4.693042 TCCATCATGACATCTGCATGTA 57.307 40.909 0.00 0.00 43.79 2.29
55 56 4.638304 TCCATCATGACATCTGCATGTAG 58.362 43.478 4.14 4.14 43.79 2.74
56 57 4.345837 TCCATCATGACATCTGCATGTAGA 59.654 41.667 16.23 16.23 43.79 2.59
57 58 5.012768 TCCATCATGACATCTGCATGTAGAT 59.987 40.000 19.38 19.38 43.79 1.98
67 68 5.723492 TCTGCATGTAGATGAAACATTCG 57.277 39.130 9.69 0.00 35.39 3.34
68 69 5.178061 TCTGCATGTAGATGAAACATTCGT 58.822 37.500 9.69 0.00 35.39 3.85
69 70 5.291858 TCTGCATGTAGATGAAACATTCGTC 59.708 40.000 9.69 4.51 44.26 4.20
70 71 4.934602 TGCATGTAGATGAAACATTCGTCA 59.065 37.500 3.61 0.00 45.90 4.35
71 72 5.411053 TGCATGTAGATGAAACATTCGTCAA 59.589 36.000 3.61 1.52 45.90 3.18
72 73 6.093909 TGCATGTAGATGAAACATTCGTCAAT 59.906 34.615 3.61 3.39 45.90 2.57
73 74 6.412943 GCATGTAGATGAAACATTCGTCAATG 59.587 38.462 3.61 13.10 45.90 2.82
115 116 9.974980 TTATTCTTTTGGATTTTACTGTTCACC 57.025 29.630 0.00 0.00 0.00 4.02
116 117 6.399639 TCTTTTGGATTTTACTGTTCACCC 57.600 37.500 0.00 0.00 0.00 4.61
117 118 5.894393 TCTTTTGGATTTTACTGTTCACCCA 59.106 36.000 0.00 0.00 0.00 4.51
118 119 6.381420 TCTTTTGGATTTTACTGTTCACCCAA 59.619 34.615 0.00 0.00 0.00 4.12
119 120 5.782893 TTGGATTTTACTGTTCACCCAAG 57.217 39.130 0.00 0.00 0.00 3.61
120 121 4.798882 TGGATTTTACTGTTCACCCAAGT 58.201 39.130 0.00 0.00 0.00 3.16
121 122 4.582656 TGGATTTTACTGTTCACCCAAGTG 59.417 41.667 0.00 0.00 46.00 3.16
122 123 4.546570 GATTTTACTGTTCACCCAAGTGC 58.453 43.478 0.00 0.00 44.16 4.40
123 124 2.719531 TTACTGTTCACCCAAGTGCA 57.280 45.000 0.00 0.00 44.16 4.57
124 125 2.949177 TACTGTTCACCCAAGTGCAT 57.051 45.000 0.00 0.00 44.16 3.96
125 126 1.321474 ACTGTTCACCCAAGTGCATG 58.679 50.000 0.00 0.00 44.16 4.06
126 127 1.321474 CTGTTCACCCAAGTGCATGT 58.679 50.000 0.00 0.00 44.16 3.21
127 128 1.001048 CTGTTCACCCAAGTGCATGTG 60.001 52.381 0.00 0.00 44.16 3.21
128 129 1.317613 GTTCACCCAAGTGCATGTGA 58.682 50.000 0.00 0.00 44.16 3.58
129 130 1.267806 GTTCACCCAAGTGCATGTGAG 59.732 52.381 0.00 0.00 44.16 3.51
130 131 0.890542 TCACCCAAGTGCATGTGAGC 60.891 55.000 0.00 0.00 44.16 4.26
131 132 0.892358 CACCCAAGTGCATGTGAGCT 60.892 55.000 0.00 0.00 37.14 4.09
132 133 0.178981 ACCCAAGTGCATGTGAGCTT 60.179 50.000 0.00 0.00 34.99 3.74
133 134 1.073763 ACCCAAGTGCATGTGAGCTTA 59.926 47.619 0.00 0.00 34.99 3.09
134 135 1.741706 CCCAAGTGCATGTGAGCTTAG 59.258 52.381 0.00 0.00 34.99 2.18
135 136 1.741706 CCAAGTGCATGTGAGCTTAGG 59.258 52.381 0.00 0.00 34.99 2.69
136 137 2.616256 CCAAGTGCATGTGAGCTTAGGA 60.616 50.000 0.00 0.00 34.99 2.94
137 138 3.076621 CAAGTGCATGTGAGCTTAGGAA 58.923 45.455 0.00 0.00 34.99 3.36
138 139 2.704572 AGTGCATGTGAGCTTAGGAAC 58.295 47.619 0.00 0.00 34.99 3.62
139 140 2.038952 AGTGCATGTGAGCTTAGGAACA 59.961 45.455 0.00 0.00 34.99 3.18
140 141 2.417933 GTGCATGTGAGCTTAGGAACAG 59.582 50.000 0.00 0.00 34.99 3.16
141 142 2.302733 TGCATGTGAGCTTAGGAACAGA 59.697 45.455 0.00 0.00 34.99 3.41
142 143 3.244526 TGCATGTGAGCTTAGGAACAGAA 60.245 43.478 0.00 0.00 34.99 3.02
143 144 3.753272 GCATGTGAGCTTAGGAACAGAAA 59.247 43.478 0.00 0.00 0.00 2.52
144 145 4.378874 GCATGTGAGCTTAGGAACAGAAAC 60.379 45.833 0.00 0.00 0.00 2.78
145 146 4.689612 TGTGAGCTTAGGAACAGAAACT 57.310 40.909 0.00 0.00 0.00 2.66
146 147 4.632153 TGTGAGCTTAGGAACAGAAACTC 58.368 43.478 0.00 0.00 0.00 3.01
147 148 3.997681 GTGAGCTTAGGAACAGAAACTCC 59.002 47.826 0.00 0.00 0.00 3.85
148 149 3.646162 TGAGCTTAGGAACAGAAACTCCA 59.354 43.478 0.00 0.00 33.83 3.86
149 150 4.287067 TGAGCTTAGGAACAGAAACTCCAT 59.713 41.667 0.00 0.00 33.83 3.41
150 151 4.583871 AGCTTAGGAACAGAAACTCCATG 58.416 43.478 0.00 0.00 33.83 3.66
151 152 4.042187 AGCTTAGGAACAGAAACTCCATGT 59.958 41.667 0.00 0.00 33.83 3.21
152 153 4.393371 GCTTAGGAACAGAAACTCCATGTC 59.607 45.833 0.00 0.00 33.83 3.06
153 154 3.425162 AGGAACAGAAACTCCATGTCC 57.575 47.619 0.00 0.00 33.83 4.02
154 155 2.711009 AGGAACAGAAACTCCATGTCCA 59.289 45.455 0.00 0.00 33.83 4.02
155 156 3.331889 AGGAACAGAAACTCCATGTCCAT 59.668 43.478 0.00 0.00 33.83 3.41
156 157 4.082125 GGAACAGAAACTCCATGTCCATT 58.918 43.478 0.00 0.00 0.00 3.16
157 158 4.524328 GGAACAGAAACTCCATGTCCATTT 59.476 41.667 0.00 0.00 0.00 2.32
158 159 5.011023 GGAACAGAAACTCCATGTCCATTTT 59.989 40.000 0.00 0.00 0.00 1.82
159 160 6.462909 GGAACAGAAACTCCATGTCCATTTTT 60.463 38.462 0.00 0.00 0.00 1.94
160 161 6.089249 ACAGAAACTCCATGTCCATTTTTC 57.911 37.500 0.00 0.00 0.00 2.29
161 162 5.835280 ACAGAAACTCCATGTCCATTTTTCT 59.165 36.000 0.00 0.00 33.21 2.52
162 163 6.015940 ACAGAAACTCCATGTCCATTTTTCTC 60.016 38.462 0.00 0.00 31.14 2.87
163 164 6.208204 CAGAAACTCCATGTCCATTTTTCTCT 59.792 38.462 0.00 0.00 31.14 3.10
164 165 6.432472 AGAAACTCCATGTCCATTTTTCTCTC 59.568 38.462 0.00 0.00 28.02 3.20
165 166 5.511386 ACTCCATGTCCATTTTTCTCTCT 57.489 39.130 0.00 0.00 0.00 3.10
166 167 5.495640 ACTCCATGTCCATTTTTCTCTCTC 58.504 41.667 0.00 0.00 0.00 3.20
167 168 5.250313 ACTCCATGTCCATTTTTCTCTCTCT 59.750 40.000 0.00 0.00 0.00 3.10
168 169 6.131972 TCCATGTCCATTTTTCTCTCTCTT 57.868 37.500 0.00 0.00 0.00 2.85
169 170 6.546484 TCCATGTCCATTTTTCTCTCTCTTT 58.454 36.000 0.00 0.00 0.00 2.52
170 171 7.006509 TCCATGTCCATTTTTCTCTCTCTTTT 58.993 34.615 0.00 0.00 0.00 2.27
171 172 7.506938 TCCATGTCCATTTTTCTCTCTCTTTTT 59.493 33.333 0.00 0.00 0.00 1.94
172 173 8.796475 CCATGTCCATTTTTCTCTCTCTTTTTA 58.204 33.333 0.00 0.00 0.00 1.52
220 221 8.126871 TCTTTTAAATGAATCGTGATACCTCG 57.873 34.615 1.49 0.00 0.00 4.63
221 222 7.977293 TCTTTTAAATGAATCGTGATACCTCGA 59.023 33.333 1.49 0.00 41.61 4.04
222 223 7.459394 TTTAAATGAATCGTGATACCTCGAC 57.541 36.000 0.00 0.00 40.45 4.20
223 224 4.920640 AATGAATCGTGATACCTCGACT 57.079 40.909 0.00 0.00 40.45 4.18
224 225 4.920640 ATGAATCGTGATACCTCGACTT 57.079 40.909 0.00 0.00 40.45 3.01
225 226 4.288670 TGAATCGTGATACCTCGACTTC 57.711 45.455 0.00 0.00 40.45 3.01
226 227 3.692593 TGAATCGTGATACCTCGACTTCA 59.307 43.478 0.00 0.00 40.45 3.02
227 228 4.338400 TGAATCGTGATACCTCGACTTCAT 59.662 41.667 0.00 0.00 40.45 2.57
228 229 3.692791 TCGTGATACCTCGACTTCATG 57.307 47.619 0.00 0.00 33.96 3.07
229 230 3.275999 TCGTGATACCTCGACTTCATGA 58.724 45.455 0.00 0.00 33.96 3.07
230 231 3.883489 TCGTGATACCTCGACTTCATGAT 59.117 43.478 0.00 0.00 33.96 2.45
231 232 4.338400 TCGTGATACCTCGACTTCATGATT 59.662 41.667 0.00 0.00 33.96 2.57
232 233 5.529800 TCGTGATACCTCGACTTCATGATTA 59.470 40.000 0.00 0.00 33.96 1.75
233 234 6.038936 TCGTGATACCTCGACTTCATGATTAA 59.961 38.462 0.00 0.00 33.96 1.40
234 235 6.863645 CGTGATACCTCGACTTCATGATTAAT 59.136 38.462 0.00 0.00 0.00 1.40
235 236 7.061210 CGTGATACCTCGACTTCATGATTAATC 59.939 40.741 8.60 8.60 0.00 1.75
236 237 7.867909 GTGATACCTCGACTTCATGATTAATCA 59.132 37.037 20.07 20.07 41.70 2.57
237 238 7.867909 TGATACCTCGACTTCATGATTAATCAC 59.132 37.037 20.19 5.92 40.03 3.06
238 239 5.977635 ACCTCGACTTCATGATTAATCACA 58.022 37.500 20.19 7.51 40.03 3.58
239 240 6.406370 ACCTCGACTTCATGATTAATCACAA 58.594 36.000 20.19 14.24 40.03 3.33
240 241 7.050377 ACCTCGACTTCATGATTAATCACAAT 58.950 34.615 20.19 2.16 40.03 2.71
241 242 7.554118 ACCTCGACTTCATGATTAATCACAATT 59.446 33.333 20.19 10.21 40.03 2.32
242 243 8.066595 CCTCGACTTCATGATTAATCACAATTC 58.933 37.037 20.19 16.25 40.03 2.17
243 244 8.722480 TCGACTTCATGATTAATCACAATTCT 57.278 30.769 20.19 0.64 40.03 2.40
244 245 8.820933 TCGACTTCATGATTAATCACAATTCTC 58.179 33.333 20.19 9.72 40.03 2.87
245 246 8.824781 CGACTTCATGATTAATCACAATTCTCT 58.175 33.333 20.19 0.00 40.03 3.10
246 247 9.932699 GACTTCATGATTAATCACAATTCTCTG 57.067 33.333 20.19 11.83 40.03 3.35
247 248 8.404000 ACTTCATGATTAATCACAATTCTCTGC 58.596 33.333 20.19 0.00 40.03 4.26
248 249 7.868906 TCATGATTAATCACAATTCTCTGCA 57.131 32.000 20.19 1.18 40.03 4.41
249 250 8.459911 TCATGATTAATCACAATTCTCTGCAT 57.540 30.769 20.19 0.00 40.03 3.96
250 251 8.349983 TCATGATTAATCACAATTCTCTGCATG 58.650 33.333 20.19 9.84 40.03 4.06
251 252 7.868906 TGATTAATCACAATTCTCTGCATGA 57.131 32.000 14.23 0.00 0.00 3.07
252 253 7.927048 TGATTAATCACAATTCTCTGCATGAG 58.073 34.615 14.23 6.79 43.96 2.90
263 264 4.617808 CTCTGCATGAGAAAGGTCAATG 57.382 45.455 0.00 0.00 45.39 2.82
264 265 2.751259 TCTGCATGAGAAAGGTCAATGC 59.249 45.455 0.00 0.00 42.32 3.56
265 266 1.820519 TGCATGAGAAAGGTCAATGCC 59.179 47.619 0.00 0.00 41.76 4.40
266 267 1.135721 GCATGAGAAAGGTCAATGCCC 59.864 52.381 0.00 0.00 38.90 5.36
267 268 2.449464 CATGAGAAAGGTCAATGCCCA 58.551 47.619 0.00 0.00 0.00 5.36
268 269 1.909700 TGAGAAAGGTCAATGCCCAC 58.090 50.000 0.00 0.00 0.00 4.61
269 270 1.144708 TGAGAAAGGTCAATGCCCACA 59.855 47.619 0.00 0.00 0.00 4.17
270 271 2.238521 GAGAAAGGTCAATGCCCACAA 58.761 47.619 0.00 0.00 0.00 3.33
271 272 2.827921 GAGAAAGGTCAATGCCCACAAT 59.172 45.455 0.00 0.00 0.00 2.71
280 281 3.831333 TCAATGCCCACAATAACACATGT 59.169 39.130 0.00 0.00 0.00 3.21
331 335 1.878522 GAGTAGCGTCCATGCACCG 60.879 63.158 0.00 0.00 37.31 4.94
336 340 4.457496 CGTCCATGCACCGGAGCT 62.457 66.667 24.52 7.67 31.65 4.09
355 359 3.476419 GCCGCCCCTAAGCCACTA 61.476 66.667 0.00 0.00 0.00 2.74
383 387 2.681848 CTCCACTACGACGATACCAAGT 59.318 50.000 0.00 0.00 0.00 3.16
482 486 1.568612 CGCCAGTTCAGTTCGTGCAT 61.569 55.000 0.00 0.00 0.00 3.96
523 527 2.028190 CCATCCTAGGAGCGCACG 59.972 66.667 18.34 1.25 0.00 5.34
529 533 2.126618 TAGGAGCGCACGACAACG 60.127 61.111 11.47 0.00 45.75 4.10
573 577 4.083862 GAGCCCGTGTCTGTCCCC 62.084 72.222 0.00 0.00 0.00 4.81
639 664 3.209812 TCGCCGTCGATGGAGGAG 61.210 66.667 28.06 14.12 40.21 3.69
884 909 2.430921 CAGACTCGCCACGGTCAC 60.431 66.667 9.94 0.00 35.18 3.67
1044 1069 2.439883 GTCCCCTACGTCGAGGCT 60.440 66.667 4.75 0.00 35.00 4.58
1107 1132 3.711814 TTCATCCCGGGCTTCGCA 61.712 61.111 18.49 0.00 37.59 5.10
1122 1147 2.690778 CGCAAAGAAGAAGCCGGGG 61.691 63.158 2.18 0.00 0.00 5.73
1170 1195 0.950116 GCATACAGAGGCAGCATTCC 59.050 55.000 0.00 0.00 30.94 3.01
1401 1426 2.383527 GGCACTGAAGAAGTCGGCG 61.384 63.158 0.00 0.00 36.83 6.46
1407 1432 1.139095 GAAGAAGTCGGCGTCGGAT 59.861 57.895 10.62 0.00 36.95 4.18
1677 1702 1.383744 CAGAGCGCGTAGATAATTCGC 59.616 52.381 8.43 0.00 45.34 4.70
1782 1823 4.515404 GCTTCCGGCGTGTTCTAT 57.485 55.556 6.01 0.00 0.00 1.98
1785 1826 1.467342 GCTTCCGGCGTGTTCTATTTT 59.533 47.619 6.01 0.00 0.00 1.82
1786 1827 2.095415 GCTTCCGGCGTGTTCTATTTTT 60.095 45.455 6.01 0.00 0.00 1.94
1808 1849 6.825944 TTTGTTCGATTGTCCATATTCCAA 57.174 33.333 0.00 0.00 0.00 3.53
1829 1870 0.389426 CGACCAATTCCCGACGACTT 60.389 55.000 0.00 0.00 0.00 3.01
1830 1871 1.076332 GACCAATTCCCGACGACTTG 58.924 55.000 0.00 0.00 32.35 3.16
1834 1875 1.486145 AATTCCCGACGACTTGGGGT 61.486 55.000 0.00 0.00 46.03 4.95
1844 1885 4.244862 GACGACTTGGGGTTTTTACGATA 58.755 43.478 0.00 0.00 0.00 2.92
1857 1901 7.711339 GGGTTTTTACGATAGATTGAGACAGAT 59.289 37.037 0.00 0.00 41.38 2.90
1858 1902 8.543774 GGTTTTTACGATAGATTGAGACAGATG 58.456 37.037 0.00 0.00 41.38 2.90
1866 1910 4.573900 AGATTGAGACAGATGTGTGTTCC 58.426 43.478 0.00 0.00 36.88 3.62
1908 2286 5.277779 CCGTGTGAAAATCAGCTCTTGTTAA 60.278 40.000 0.00 0.00 0.00 2.01
1909 2287 6.198687 CGTGTGAAAATCAGCTCTTGTTAAA 58.801 36.000 0.00 0.00 0.00 1.52
1910 2288 6.690957 CGTGTGAAAATCAGCTCTTGTTAAAA 59.309 34.615 0.00 0.00 0.00 1.52
1911 2289 7.379529 CGTGTGAAAATCAGCTCTTGTTAAAAT 59.620 33.333 0.00 0.00 0.00 1.82
1912 2290 8.482429 GTGTGAAAATCAGCTCTTGTTAAAATG 58.518 33.333 0.00 0.00 0.00 2.32
1913 2291 8.196771 TGTGAAAATCAGCTCTTGTTAAAATGT 58.803 29.630 0.00 0.00 0.00 2.71
1914 2292 8.482429 GTGAAAATCAGCTCTTGTTAAAATGTG 58.518 33.333 0.00 0.00 0.00 3.21
1915 2293 8.412456 TGAAAATCAGCTCTTGTTAAAATGTGA 58.588 29.630 0.00 0.00 0.00 3.58
1916 2294 9.415544 GAAAATCAGCTCTTGTTAAAATGTGAT 57.584 29.630 0.00 0.00 0.00 3.06
1917 2295 9.768662 AAAATCAGCTCTTGTTAAAATGTGATT 57.231 25.926 0.00 0.00 34.41 2.57
1918 2296 8.752766 AATCAGCTCTTGTTAAAATGTGATTG 57.247 30.769 0.00 0.00 32.34 2.67
1919 2297 7.509141 TCAGCTCTTGTTAAAATGTGATTGA 57.491 32.000 0.00 0.00 0.00 2.57
1920 2298 7.939782 TCAGCTCTTGTTAAAATGTGATTGAA 58.060 30.769 0.00 0.00 0.00 2.69
1921 2299 8.412456 TCAGCTCTTGTTAAAATGTGATTGAAA 58.588 29.630 0.00 0.00 0.00 2.69
1922 2300 9.033481 CAGCTCTTGTTAAAATGTGATTGAAAA 57.967 29.630 0.00 0.00 0.00 2.29
1923 2301 9.034544 AGCTCTTGTTAAAATGTGATTGAAAAC 57.965 29.630 0.00 0.00 0.00 2.43
1924 2302 8.275632 GCTCTTGTTAAAATGTGATTGAAAACC 58.724 33.333 0.00 0.00 0.00 3.27
1925 2303 8.346476 TCTTGTTAAAATGTGATTGAAAACCG 57.654 30.769 0.00 0.00 0.00 4.44
1926 2304 7.976734 TCTTGTTAAAATGTGATTGAAAACCGT 59.023 29.630 0.00 0.00 0.00 4.83
1927 2305 9.239002 CTTGTTAAAATGTGATTGAAAACCGTA 57.761 29.630 0.00 0.00 0.00 4.02
1928 2306 9.582431 TTGTTAAAATGTGATTGAAAACCGTAA 57.418 25.926 0.00 0.00 0.00 3.18
1929 2307 9.582431 TGTTAAAATGTGATTGAAAACCGTAAA 57.418 25.926 0.00 0.00 0.00 2.01
1935 2313 7.330900 TGTGATTGAAAACCGTAAAAAGGTA 57.669 32.000 0.00 0.00 41.95 3.08
1938 2316 8.908678 GTGATTGAAAACCGTAAAAAGGTAATC 58.091 33.333 0.00 0.00 41.95 1.75
1961 2339 3.147595 GCTCCCCGCCCCAATTTC 61.148 66.667 0.00 0.00 0.00 2.17
1964 2342 1.076339 TCCCCGCCCCAATTTCATC 60.076 57.895 0.00 0.00 0.00 2.92
1968 2346 1.696063 CCGCCCCAATTTCATCTCAT 58.304 50.000 0.00 0.00 0.00 2.90
1970 2348 2.300433 CGCCCCAATTTCATCTCATGA 58.700 47.619 0.00 0.00 37.55 3.07
2006 2384 6.293462 GCGGGTAAAACTTCCATCTATTCATC 60.293 42.308 0.00 0.00 0.00 2.92
2008 2386 7.282224 CGGGTAAAACTTCCATCTATTCATCAA 59.718 37.037 0.00 0.00 0.00 2.57
2010 2388 9.788960 GGTAAAACTTCCATCTATTCATCAAAC 57.211 33.333 0.00 0.00 0.00 2.93
2018 2396 8.387190 TCCATCTATTCATCAAACATCATGAC 57.613 34.615 0.00 0.00 0.00 3.06
2021 2399 7.255491 TCTATTCATCAAACATCATGACAGC 57.745 36.000 0.00 0.00 0.00 4.40
2025 2406 5.705902 TCATCAAACATCATGACAGCAAAG 58.294 37.500 0.00 0.00 0.00 2.77
2032 2413 6.432607 ACATCATGACAGCAAAGAACATAG 57.567 37.500 0.00 0.00 0.00 2.23
2035 2416 6.732531 TCATGACAGCAAAGAACATAGAAG 57.267 37.500 0.00 0.00 0.00 2.85
2052 2433 9.979578 AACATAGAAGTAACAAAAATTGCATCA 57.020 25.926 0.00 0.00 0.00 3.07
2057 2438 9.979578 AGAAGTAACAAAAATTGCATCAATGTA 57.020 25.926 0.00 0.00 34.04 2.29
2075 2456 7.530863 TCAATGTATGTAGATCATCTAGCGAC 58.469 38.462 0.00 0.00 37.91 5.19
2076 2457 5.532025 TGTATGTAGATCATCTAGCGACG 57.468 43.478 0.00 0.00 37.91 5.12
2079 2460 3.729966 TGTAGATCATCTAGCGACGACT 58.270 45.455 0.00 0.00 28.01 4.18
2081 2462 4.685165 TGTAGATCATCTAGCGACGACTAC 59.315 45.833 0.00 0.00 28.01 2.73
2088 2469 0.179207 TAGCGACGACTACAAGCACG 60.179 55.000 0.00 0.00 0.00 5.34
2089 2470 1.728426 GCGACGACTACAAGCACGT 60.728 57.895 0.00 0.00 41.57 4.49
2090 2471 0.453282 GCGACGACTACAAGCACGTA 60.453 55.000 0.00 0.00 39.04 3.57
2104 2485 2.421168 CACGTAAGCGAGCTAAAAGC 57.579 50.000 0.00 0.00 41.62 3.51
2105 2486 1.724623 CACGTAAGCGAGCTAAAAGCA 59.275 47.619 0.00 0.00 43.38 3.91
2106 2487 1.725164 ACGTAAGCGAGCTAAAAGCAC 59.275 47.619 0.00 0.00 43.38 4.40
2120 2501 4.880748 GCACGTTGCTATCATCGC 57.119 55.556 0.00 0.00 40.96 4.58
2123 2504 1.227556 ACGTTGCTATCATCGCCCC 60.228 57.895 0.00 0.00 38.57 5.80
2130 2511 1.599606 CTATCATCGCCCCTCCCTCG 61.600 65.000 0.00 0.00 0.00 4.63
2153 2534 0.595095 GAGCCAGACAAGCCTTGTTG 59.405 55.000 12.09 11.27 45.52 3.33
2155 2536 0.031178 GCCAGACAAGCCTTGTTGTG 59.969 55.000 12.09 11.97 45.52 3.33
2158 2539 1.750778 CAGACAAGCCTTGTTGTGGTT 59.249 47.619 12.09 0.00 45.52 3.67
2161 2542 1.476488 ACAAGCCTTGTTGTGGTTGAC 59.524 47.619 3.74 0.00 42.22 3.18
2163 2544 1.846007 AGCCTTGTTGTGGTTGACAA 58.154 45.000 0.00 0.00 42.55 3.18
2165 2546 2.101249 AGCCTTGTTGTGGTTGACAATG 59.899 45.455 0.00 0.00 46.34 2.82
2166 2547 2.100584 GCCTTGTTGTGGTTGACAATGA 59.899 45.455 0.00 0.00 46.34 2.57
2176 2557 3.807622 TGGTTGACAATGAAGAAGTCGTC 59.192 43.478 0.00 0.00 35.09 4.20
2177 2558 3.807622 GGTTGACAATGAAGAAGTCGTCA 59.192 43.478 0.00 0.00 38.61 4.35
2183 2564 4.627467 ACAATGAAGAAGTCGTCATGCTAC 59.373 41.667 9.97 0.00 42.66 3.58
2184 2565 2.863739 TGAAGAAGTCGTCATGCTACG 58.136 47.619 0.69 0.69 44.19 3.51
2189 2570 4.331622 TCGTCATGCTACGACCCT 57.668 55.556 5.60 0.00 46.29 4.34
2191 2572 1.753930 TCGTCATGCTACGACCCTAA 58.246 50.000 5.60 0.00 46.29 2.69
2194 2575 2.798499 CGTCATGCTACGACCCTAAAGG 60.798 54.545 0.84 0.00 45.68 3.11
2196 2577 3.101437 TCATGCTACGACCCTAAAGGAA 58.899 45.455 0.00 0.00 39.89 3.36
2197 2578 3.118884 TCATGCTACGACCCTAAAGGAAC 60.119 47.826 0.00 0.00 39.89 3.62
2199 2580 2.633967 TGCTACGACCCTAAAGGAACAA 59.366 45.455 0.00 0.00 39.89 2.83
2200 2581 3.262405 TGCTACGACCCTAAAGGAACAAT 59.738 43.478 0.00 0.00 39.89 2.71
2204 2585 5.431179 ACGACCCTAAAGGAACAATACAT 57.569 39.130 0.00 0.00 39.89 2.29
2205 2586 5.425630 ACGACCCTAAAGGAACAATACATC 58.574 41.667 0.00 0.00 39.89 3.06
2206 2587 4.506654 CGACCCTAAAGGAACAATACATCG 59.493 45.833 0.00 0.00 39.89 3.84
2212 2596 6.373216 CCTAAAGGAACAATACATCGGAACAA 59.627 38.462 0.00 0.00 37.39 2.83
2214 2598 4.007659 AGGAACAATACATCGGAACAACC 58.992 43.478 0.00 0.00 0.00 3.77
2215 2599 3.754323 GGAACAATACATCGGAACAACCA 59.246 43.478 0.00 0.00 38.90 3.67
2217 2601 3.078837 ACAATACATCGGAACAACCACC 58.921 45.455 0.00 0.00 38.90 4.61
2219 2603 1.354101 TACATCGGAACAACCACCCT 58.646 50.000 0.00 0.00 38.90 4.34
2223 2607 2.600470 GGAACAACCACCCTGCCC 60.600 66.667 0.00 0.00 38.79 5.36
2226 2610 1.533753 AACAACCACCCTGCCCATG 60.534 57.895 0.00 0.00 0.00 3.66
2231 2615 1.383799 CCACCCTGCCCATGAAGAA 59.616 57.895 0.00 0.00 0.00 2.52
2234 2618 1.547372 CACCCTGCCCATGAAGAAAAG 59.453 52.381 0.00 0.00 0.00 2.27
2235 2619 1.147817 ACCCTGCCCATGAAGAAAAGT 59.852 47.619 0.00 0.00 0.00 2.66
2236 2620 1.547372 CCCTGCCCATGAAGAAAAGTG 59.453 52.381 0.00 0.00 0.00 3.16
2237 2621 2.242043 CCTGCCCATGAAGAAAAGTGT 58.758 47.619 0.00 0.00 0.00 3.55
2238 2622 3.420893 CCTGCCCATGAAGAAAAGTGTA 58.579 45.455 0.00 0.00 0.00 2.90
2239 2623 3.441572 CCTGCCCATGAAGAAAAGTGTAG 59.558 47.826 0.00 0.00 0.00 2.74
2240 2624 4.326826 CTGCCCATGAAGAAAAGTGTAGA 58.673 43.478 0.00 0.00 0.00 2.59
2242 2626 4.943705 TGCCCATGAAGAAAAGTGTAGATC 59.056 41.667 0.00 0.00 0.00 2.75
2247 2631 6.591834 CCATGAAGAAAAGTGTAGATCGAAGT 59.408 38.462 0.00 0.00 0.00 3.01
2248 2632 7.412346 CCATGAAGAAAAGTGTAGATCGAAGTG 60.412 40.741 0.00 0.00 0.00 3.16
2249 2633 6.513180 TGAAGAAAAGTGTAGATCGAAGTGT 58.487 36.000 0.00 0.00 0.00 3.55
2257 2641 3.322541 TGTAGATCGAAGTGTTCCAACCA 59.677 43.478 0.00 0.00 0.00 3.67
2258 2642 2.767505 AGATCGAAGTGTTCCAACCAC 58.232 47.619 0.00 0.00 0.00 4.16
2267 2651 3.199071 AGTGTTCCAACCACTAGACACAA 59.801 43.478 0.00 0.00 39.71 3.33
2268 2652 3.942748 GTGTTCCAACCACTAGACACAAA 59.057 43.478 0.00 0.00 37.79 2.83
2272 2656 4.590918 TCCAACCACTAGACACAAAAACA 58.409 39.130 0.00 0.00 0.00 2.83
2275 2659 5.331902 CAACCACTAGACACAAAAACACAG 58.668 41.667 0.00 0.00 0.00 3.66
2277 2661 5.437060 ACCACTAGACACAAAAACACAGAT 58.563 37.500 0.00 0.00 0.00 2.90
2288 2672 6.808212 CACAAAAACACAGATGAACAAAGACT 59.192 34.615 0.00 0.00 0.00 3.24
2290 2674 6.757897 AAAACACAGATGAACAAAGACTGA 57.242 33.333 0.00 0.00 33.53 3.41
2495 2879 3.142393 CGAGCTACTGGGATGGGG 58.858 66.667 0.00 0.00 0.00 4.96
2496 2880 1.457643 CGAGCTACTGGGATGGGGA 60.458 63.158 0.00 0.00 0.00 4.81
2497 2881 1.749334 CGAGCTACTGGGATGGGGAC 61.749 65.000 0.00 0.00 0.00 4.46
2498 2882 0.399233 GAGCTACTGGGATGGGGACT 60.399 60.000 0.00 0.00 0.00 3.85
2499 2883 0.941963 AGCTACTGGGATGGGGACTA 59.058 55.000 0.00 0.00 0.00 2.59
2500 2884 1.133009 AGCTACTGGGATGGGGACTAG 60.133 57.143 0.00 0.00 0.00 2.57
2501 2885 2.016905 CTACTGGGATGGGGACTAGG 57.983 60.000 0.00 0.00 0.00 3.02
2502 2886 0.105142 TACTGGGATGGGGACTAGGC 60.105 60.000 0.00 0.00 0.00 3.93
2503 2887 1.384502 CTGGGATGGGGACTAGGCA 60.385 63.158 0.00 0.00 0.00 4.75
2504 2888 1.384502 TGGGATGGGGACTAGGCAG 60.385 63.158 0.00 0.00 0.00 4.85
2505 2889 2.150051 GGGATGGGGACTAGGCAGG 61.150 68.421 0.00 0.00 0.00 4.85
2506 2890 2.150051 GGATGGGGACTAGGCAGGG 61.150 68.421 0.00 0.00 0.00 4.45
2507 2891 1.074471 GATGGGGACTAGGCAGGGA 60.074 63.158 0.00 0.00 0.00 4.20
2508 2892 1.074167 ATGGGGACTAGGCAGGGAG 60.074 63.158 0.00 0.00 0.00 4.30
2509 2893 1.603633 ATGGGGACTAGGCAGGGAGA 61.604 60.000 0.00 0.00 0.00 3.71
2510 2894 1.003051 GGGGACTAGGCAGGGAGAA 59.997 63.158 0.00 0.00 0.00 2.87
2511 2895 1.338890 GGGGACTAGGCAGGGAGAAC 61.339 65.000 0.00 0.00 0.00 3.01
2512 2896 1.338890 GGGACTAGGCAGGGAGAACC 61.339 65.000 0.00 0.00 40.67 3.62
2527 2911 6.934048 GGGAGAACCTTATTTCATCTTCTG 57.066 41.667 0.00 0.00 35.85 3.02
2528 2912 6.653989 GGGAGAACCTTATTTCATCTTCTGA 58.346 40.000 0.00 0.00 35.85 3.27
2529 2913 6.765512 GGGAGAACCTTATTTCATCTTCTGAG 59.234 42.308 0.00 0.00 33.56 3.35
2530 2914 7.334858 GGAGAACCTTATTTCATCTTCTGAGT 58.665 38.462 0.00 0.00 34.68 3.41
2531 2915 7.279758 GGAGAACCTTATTTCATCTTCTGAGTG 59.720 40.741 0.00 0.00 34.68 3.51
2532 2916 6.597280 AGAACCTTATTTCATCTTCTGAGTGC 59.403 38.462 0.00 0.00 34.68 4.40
2533 2917 5.189180 ACCTTATTTCATCTTCTGAGTGCC 58.811 41.667 0.00 0.00 34.68 5.01
2534 2918 4.272018 CCTTATTTCATCTTCTGAGTGCCG 59.728 45.833 0.00 0.00 34.68 5.69
2535 2919 1.442769 TTTCATCTTCTGAGTGCCGC 58.557 50.000 0.00 0.00 34.68 6.53
2536 2920 0.391661 TTCATCTTCTGAGTGCCGCC 60.392 55.000 0.00 0.00 34.68 6.13
2537 2921 2.169789 CATCTTCTGAGTGCCGCCG 61.170 63.158 0.00 0.00 0.00 6.46
2538 2922 4.742201 TCTTCTGAGTGCCGCCGC 62.742 66.667 0.00 0.00 0.00 6.53
2554 2938 4.980805 GCCACACCGCCTTCACGA 62.981 66.667 0.00 0.00 34.06 4.35
2555 2939 2.280524 CCACACCGCCTTCACGAA 60.281 61.111 0.00 0.00 34.06 3.85
2556 2940 2.604174 CCACACCGCCTTCACGAAC 61.604 63.158 0.00 0.00 34.06 3.95
2557 2941 1.885388 CACACCGCCTTCACGAACA 60.885 57.895 0.00 0.00 34.06 3.18
2558 2942 1.594293 ACACCGCCTTCACGAACAG 60.594 57.895 0.00 0.00 34.06 3.16
2559 2943 2.030562 ACCGCCTTCACGAACAGG 59.969 61.111 0.00 0.00 34.06 4.00
2560 2944 2.342279 CCGCCTTCACGAACAGGA 59.658 61.111 0.00 0.00 34.06 3.86
2561 2945 2.027625 CCGCCTTCACGAACAGGAC 61.028 63.158 0.00 0.00 34.06 3.85
2562 2946 1.300620 CGCCTTCACGAACAGGACA 60.301 57.895 0.00 0.00 34.06 4.02
2563 2947 0.878523 CGCCTTCACGAACAGGACAA 60.879 55.000 0.00 0.00 34.06 3.18
2564 2948 1.305201 GCCTTCACGAACAGGACAAA 58.695 50.000 0.00 0.00 30.81 2.83
2565 2949 1.673920 GCCTTCACGAACAGGACAAAA 59.326 47.619 0.00 0.00 30.81 2.44
2566 2950 2.287009 GCCTTCACGAACAGGACAAAAG 60.287 50.000 0.00 0.00 30.81 2.27
2567 2951 2.287009 CCTTCACGAACAGGACAAAAGC 60.287 50.000 0.00 0.00 30.81 3.51
2568 2952 0.934496 TCACGAACAGGACAAAAGCG 59.066 50.000 0.00 0.00 0.00 4.68
2569 2953 0.657368 CACGAACAGGACAAAAGCGC 60.657 55.000 0.00 0.00 0.00 5.92
2570 2954 0.814010 ACGAACAGGACAAAAGCGCT 60.814 50.000 2.64 2.64 0.00 5.92
2571 2955 1.144969 CGAACAGGACAAAAGCGCTA 58.855 50.000 12.05 0.00 0.00 4.26
2572 2956 1.529438 CGAACAGGACAAAAGCGCTAA 59.471 47.619 12.05 0.00 0.00 3.09
2573 2957 2.032377 CGAACAGGACAAAAGCGCTAAA 60.032 45.455 12.05 0.00 0.00 1.85
2574 2958 3.297472 GAACAGGACAAAAGCGCTAAAC 58.703 45.455 12.05 0.49 0.00 2.01
2575 2959 2.294074 ACAGGACAAAAGCGCTAAACA 58.706 42.857 12.05 0.00 0.00 2.83
2576 2960 2.884639 ACAGGACAAAAGCGCTAAACAT 59.115 40.909 12.05 0.00 0.00 2.71
2577 2961 4.069304 ACAGGACAAAAGCGCTAAACATA 58.931 39.130 12.05 0.00 0.00 2.29
2578 2962 4.083484 ACAGGACAAAAGCGCTAAACATAC 60.083 41.667 12.05 0.00 0.00 2.39
2579 2963 4.154195 CAGGACAAAAGCGCTAAACATACT 59.846 41.667 12.05 0.89 0.00 2.12
2580 2964 5.350365 CAGGACAAAAGCGCTAAACATACTA 59.650 40.000 12.05 0.00 0.00 1.82
2581 2965 5.935789 AGGACAAAAGCGCTAAACATACTAA 59.064 36.000 12.05 0.00 0.00 2.24
2582 2966 6.428771 AGGACAAAAGCGCTAAACATACTAAA 59.571 34.615 12.05 0.00 0.00 1.85
2583 2967 7.040961 AGGACAAAAGCGCTAAACATACTAAAA 60.041 33.333 12.05 0.00 0.00 1.52
2584 2968 7.592164 GGACAAAAGCGCTAAACATACTAAAAA 59.408 33.333 12.05 0.00 0.00 1.94
2585 2969 8.277270 ACAAAAGCGCTAAACATACTAAAAAC 57.723 30.769 12.05 0.00 0.00 2.43
2586 2970 7.916450 ACAAAAGCGCTAAACATACTAAAAACA 59.084 29.630 12.05 0.00 0.00 2.83
2587 2971 7.847166 AAAGCGCTAAACATACTAAAAACAC 57.153 32.000 12.05 0.00 0.00 3.32
2588 2972 6.548441 AGCGCTAAACATACTAAAAACACA 57.452 33.333 8.99 0.00 0.00 3.72
2589 2973 6.368213 AGCGCTAAACATACTAAAAACACAC 58.632 36.000 8.99 0.00 0.00 3.82
2590 2974 5.566395 GCGCTAAACATACTAAAAACACACC 59.434 40.000 0.00 0.00 0.00 4.16
2591 2975 6.567132 GCGCTAAACATACTAAAAACACACCT 60.567 38.462 0.00 0.00 0.00 4.00
2592 2976 7.360269 GCGCTAAACATACTAAAAACACACCTA 60.360 37.037 0.00 0.00 0.00 3.08
2593 2977 8.497554 CGCTAAACATACTAAAAACACACCTAA 58.502 33.333 0.00 0.00 0.00 2.69
2602 2986 8.642908 ACTAAAAACACACCTAAAATTGAAGC 57.357 30.769 0.00 0.00 0.00 3.86
2603 2987 8.254508 ACTAAAAACACACCTAAAATTGAAGCA 58.745 29.630 0.00 0.00 0.00 3.91
2604 2988 9.260002 CTAAAAACACACCTAAAATTGAAGCAT 57.740 29.630 0.00 0.00 0.00 3.79
2605 2989 7.481275 AAAACACACCTAAAATTGAAGCATG 57.519 32.000 0.00 0.00 0.00 4.06
2606 2990 6.403866 AACACACCTAAAATTGAAGCATGA 57.596 33.333 0.00 0.00 0.00 3.07
2607 2991 6.017400 ACACACCTAAAATTGAAGCATGAG 57.983 37.500 0.00 0.00 0.00 2.90
2608 2992 4.860907 CACACCTAAAATTGAAGCATGAGC 59.139 41.667 0.00 0.00 42.56 4.26
2609 2993 4.082026 ACACCTAAAATTGAAGCATGAGCC 60.082 41.667 0.00 0.00 43.56 4.70
2610 2994 3.448660 ACCTAAAATTGAAGCATGAGCCC 59.551 43.478 0.00 0.00 43.56 5.19
2611 2995 3.703052 CCTAAAATTGAAGCATGAGCCCT 59.297 43.478 0.00 0.00 43.56 5.19
2612 2996 3.881937 AAAATTGAAGCATGAGCCCTC 57.118 42.857 0.00 0.00 43.56 4.30
2613 2997 1.772836 AATTGAAGCATGAGCCCTCC 58.227 50.000 0.00 0.00 43.56 4.30
2614 2998 0.465097 ATTGAAGCATGAGCCCTCCG 60.465 55.000 0.00 0.00 43.56 4.63
2615 2999 2.203126 GAAGCATGAGCCCTCCGG 60.203 66.667 0.00 0.00 43.56 5.14
2626 3010 4.431131 CCTCCGGCAAGCATGGGT 62.431 66.667 0.00 0.00 0.00 4.51
2627 3011 2.825836 CTCCGGCAAGCATGGGTC 60.826 66.667 0.00 0.00 0.00 4.46
2628 3012 3.626996 CTCCGGCAAGCATGGGTCA 62.627 63.158 0.00 0.00 0.00 4.02
2629 3013 3.136123 CCGGCAAGCATGGGTCAG 61.136 66.667 0.00 0.00 0.00 3.51
2630 3014 3.136123 CGGCAAGCATGGGTCAGG 61.136 66.667 0.00 0.00 0.00 3.86
2631 3015 2.356278 GGCAAGCATGGGTCAGGA 59.644 61.111 0.00 0.00 0.00 3.86
2632 3016 1.076485 GGCAAGCATGGGTCAGGAT 60.076 57.895 0.00 0.00 0.00 3.24
2633 3017 1.105759 GGCAAGCATGGGTCAGGATC 61.106 60.000 0.00 0.00 0.00 3.36
2634 3018 1.105759 GCAAGCATGGGTCAGGATCC 61.106 60.000 2.48 2.48 0.00 3.36
2640 3024 1.224315 TGGGTCAGGATCCATTGCG 59.776 57.895 15.82 0.00 36.49 4.85
2641 3025 2.189499 GGGTCAGGATCCATTGCGC 61.189 63.158 15.82 0.00 0.00 6.09
2642 3026 2.189499 GGTCAGGATCCATTGCGCC 61.189 63.158 15.82 6.60 0.00 6.53
2643 3027 1.153086 GTCAGGATCCATTGCGCCT 60.153 57.895 15.82 0.00 0.00 5.52
2644 3028 1.146930 TCAGGATCCATTGCGCCTC 59.853 57.895 15.82 0.00 0.00 4.70
2645 3029 1.895707 CAGGATCCATTGCGCCTCC 60.896 63.158 15.82 1.38 0.00 4.30
2646 3030 2.192979 GGATCCATTGCGCCTCCA 59.807 61.111 6.95 0.00 0.00 3.86
2647 3031 2.189499 GGATCCATTGCGCCTCCAC 61.189 63.158 6.95 0.00 0.00 4.02
2648 3032 2.514592 ATCCATTGCGCCTCCACG 60.515 61.111 4.18 0.00 0.00 4.94
2649 3033 4.776322 TCCATTGCGCCTCCACGG 62.776 66.667 4.18 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.815809 ACATTCGTGGAGGTCTGAAAAA 58.184 40.909 0.00 0.00 0.00 1.94
9 10 3.485463 ACATTCGTGGAGGTCTGAAAA 57.515 42.857 0.00 0.00 0.00 2.29
10 11 3.322541 TGTACATTCGTGGAGGTCTGAAA 59.677 43.478 0.00 0.00 0.00 2.69
11 12 2.894765 TGTACATTCGTGGAGGTCTGAA 59.105 45.455 0.00 0.00 0.00 3.02
12 13 2.521126 TGTACATTCGTGGAGGTCTGA 58.479 47.619 0.00 0.00 0.00 3.27
13 14 3.448686 GATGTACATTCGTGGAGGTCTG 58.551 50.000 10.30 0.00 0.00 3.51
14 15 2.431057 GGATGTACATTCGTGGAGGTCT 59.569 50.000 10.30 0.00 0.00 3.85
15 16 2.167693 TGGATGTACATTCGTGGAGGTC 59.832 50.000 10.30 0.00 0.00 3.85
16 17 2.184533 TGGATGTACATTCGTGGAGGT 58.815 47.619 10.30 0.00 0.00 3.85
17 18 2.979814 TGGATGTACATTCGTGGAGG 57.020 50.000 10.30 0.00 0.00 4.30
18 19 4.058721 TGATGGATGTACATTCGTGGAG 57.941 45.455 13.84 0.00 0.00 3.86
19 20 4.100808 TCATGATGGATGTACATTCGTGGA 59.899 41.667 13.84 5.84 33.29 4.02
20 21 4.212004 GTCATGATGGATGTACATTCGTGG 59.788 45.833 13.84 3.65 33.29 4.94
21 22 4.810491 TGTCATGATGGATGTACATTCGTG 59.190 41.667 13.84 15.73 33.29 4.35
22 23 5.022282 TGTCATGATGGATGTACATTCGT 57.978 39.130 8.70 8.70 33.29 3.85
23 24 5.930569 AGATGTCATGATGGATGTACATTCG 59.069 40.000 10.30 0.00 35.09 3.34
24 25 6.348295 GCAGATGTCATGATGGATGTACATTC 60.348 42.308 10.30 8.72 35.09 2.67
25 26 5.472478 GCAGATGTCATGATGGATGTACATT 59.528 40.000 10.30 0.00 35.09 2.71
26 27 5.001874 GCAGATGTCATGATGGATGTACAT 58.998 41.667 8.43 8.43 36.41 2.29
27 28 4.141665 TGCAGATGTCATGATGGATGTACA 60.142 41.667 0.00 0.00 33.29 2.90
28 29 4.383173 TGCAGATGTCATGATGGATGTAC 58.617 43.478 0.00 0.00 33.29 2.90
29 30 4.693042 TGCAGATGTCATGATGGATGTA 57.307 40.909 0.00 0.00 33.29 2.29
30 31 3.570912 TGCAGATGTCATGATGGATGT 57.429 42.857 0.00 0.00 33.29 3.06
31 32 3.821033 ACATGCAGATGTCATGATGGATG 59.179 43.478 20.54 20.54 44.26 3.51
32 33 4.100279 ACATGCAGATGTCATGATGGAT 57.900 40.909 17.98 0.00 42.84 3.41
33 34 3.570912 ACATGCAGATGTCATGATGGA 57.429 42.857 17.98 0.00 42.84 3.41
34 35 4.638304 TCTACATGCAGATGTCATGATGG 58.362 43.478 17.98 10.49 42.14 3.51
35 36 6.170675 CATCTACATGCAGATGTCATGATG 57.829 41.667 22.89 6.46 44.59 3.07
44 45 5.819379 ACGAATGTTTCATCTACATGCAGAT 59.181 36.000 2.32 2.32 36.41 2.90
45 46 5.178061 ACGAATGTTTCATCTACATGCAGA 58.822 37.500 0.00 0.00 36.41 4.26
46 47 5.063817 TGACGAATGTTTCATCTACATGCAG 59.936 40.000 0.00 0.00 36.41 4.41
47 48 4.934602 TGACGAATGTTTCATCTACATGCA 59.065 37.500 0.00 0.00 36.41 3.96
48 49 5.469373 TGACGAATGTTTCATCTACATGC 57.531 39.130 0.00 0.00 36.41 4.06
49 50 7.887752 CATTGACGAATGTTTCATCTACATG 57.112 36.000 0.00 0.00 36.41 3.21
89 90 9.974980 GGTGAACAGTAAAATCCAAAAGAATAA 57.025 29.630 0.00 0.00 0.00 1.40
90 91 8.581578 GGGTGAACAGTAAAATCCAAAAGAATA 58.418 33.333 0.00 0.00 0.00 1.75
91 92 7.070571 TGGGTGAACAGTAAAATCCAAAAGAAT 59.929 33.333 0.00 0.00 0.00 2.40
92 93 6.381420 TGGGTGAACAGTAAAATCCAAAAGAA 59.619 34.615 0.00 0.00 0.00 2.52
93 94 5.894393 TGGGTGAACAGTAAAATCCAAAAGA 59.106 36.000 0.00 0.00 0.00 2.52
94 95 6.155475 TGGGTGAACAGTAAAATCCAAAAG 57.845 37.500 0.00 0.00 0.00 2.27
95 96 6.155393 ACTTGGGTGAACAGTAAAATCCAAAA 59.845 34.615 0.00 0.00 33.38 2.44
96 97 5.659079 ACTTGGGTGAACAGTAAAATCCAAA 59.341 36.000 0.00 0.00 33.38 3.28
97 98 5.068460 CACTTGGGTGAACAGTAAAATCCAA 59.932 40.000 0.00 0.00 45.61 3.53
98 99 4.582656 CACTTGGGTGAACAGTAAAATCCA 59.417 41.667 0.00 0.00 45.61 3.41
99 100 4.558697 GCACTTGGGTGAACAGTAAAATCC 60.559 45.833 0.00 0.00 45.61 3.01
100 101 4.037446 TGCACTTGGGTGAACAGTAAAATC 59.963 41.667 0.00 0.00 45.61 2.17
101 102 3.957497 TGCACTTGGGTGAACAGTAAAAT 59.043 39.130 0.00 0.00 45.61 1.82
102 103 3.357203 TGCACTTGGGTGAACAGTAAAA 58.643 40.909 0.00 0.00 45.61 1.52
103 104 3.006112 TGCACTTGGGTGAACAGTAAA 57.994 42.857 0.00 0.00 45.61 2.01
104 105 2.719531 TGCACTTGGGTGAACAGTAA 57.280 45.000 0.00 0.00 45.61 2.24
105 106 2.158682 ACATGCACTTGGGTGAACAGTA 60.159 45.455 0.00 0.00 45.61 2.74
106 107 1.321474 CATGCACTTGGGTGAACAGT 58.679 50.000 0.00 0.00 45.61 3.55
107 108 1.001048 CACATGCACTTGGGTGAACAG 60.001 52.381 0.00 0.00 45.61 3.16
108 109 1.031235 CACATGCACTTGGGTGAACA 58.969 50.000 0.00 0.00 45.61 3.18
109 110 1.267806 CTCACATGCACTTGGGTGAAC 59.732 52.381 0.00 0.00 45.61 3.18
110 111 1.608055 CTCACATGCACTTGGGTGAA 58.392 50.000 0.00 0.00 45.61 3.18
111 112 0.890542 GCTCACATGCACTTGGGTGA 60.891 55.000 0.00 0.00 45.61 4.02
112 113 0.892358 AGCTCACATGCACTTGGGTG 60.892 55.000 0.00 0.00 45.53 4.61
113 114 0.178981 AAGCTCACATGCACTTGGGT 60.179 50.000 0.00 0.00 34.99 4.51
114 115 1.741706 CTAAGCTCACATGCACTTGGG 59.258 52.381 0.00 0.00 34.99 4.12
115 116 1.741706 CCTAAGCTCACATGCACTTGG 59.258 52.381 0.00 0.00 34.99 3.61
116 117 2.703416 TCCTAAGCTCACATGCACTTG 58.297 47.619 0.00 0.00 34.99 3.16
117 118 3.077359 GTTCCTAAGCTCACATGCACTT 58.923 45.455 0.00 0.00 34.99 3.16
118 119 2.038952 TGTTCCTAAGCTCACATGCACT 59.961 45.455 0.00 0.00 34.99 4.40
119 120 2.417933 CTGTTCCTAAGCTCACATGCAC 59.582 50.000 0.00 0.00 34.99 4.57
120 121 2.302733 TCTGTTCCTAAGCTCACATGCA 59.697 45.455 0.00 0.00 34.99 3.96
121 122 2.977914 TCTGTTCCTAAGCTCACATGC 58.022 47.619 0.00 0.00 0.00 4.06
122 123 4.999950 AGTTTCTGTTCCTAAGCTCACATG 59.000 41.667 0.00 0.00 0.00 3.21
123 124 5.234466 AGTTTCTGTTCCTAAGCTCACAT 57.766 39.130 0.00 0.00 0.00 3.21
124 125 4.503296 GGAGTTTCTGTTCCTAAGCTCACA 60.503 45.833 0.00 0.00 35.39 3.58
125 126 3.997681 GGAGTTTCTGTTCCTAAGCTCAC 59.002 47.826 0.00 0.00 35.39 3.51
126 127 3.646162 TGGAGTTTCTGTTCCTAAGCTCA 59.354 43.478 0.00 0.00 35.39 4.26
127 128 4.273148 TGGAGTTTCTGTTCCTAAGCTC 57.727 45.455 0.00 0.00 34.48 4.09
128 129 4.042187 ACATGGAGTTTCTGTTCCTAAGCT 59.958 41.667 0.00 0.00 34.48 3.74
129 130 4.327680 ACATGGAGTTTCTGTTCCTAAGC 58.672 43.478 0.00 0.00 34.48 3.09
130 131 4.938226 GGACATGGAGTTTCTGTTCCTAAG 59.062 45.833 0.00 0.00 34.48 2.18
131 132 4.349636 TGGACATGGAGTTTCTGTTCCTAA 59.650 41.667 0.00 0.00 34.48 2.69
132 133 3.907474 TGGACATGGAGTTTCTGTTCCTA 59.093 43.478 0.00 0.00 34.48 2.94
133 134 2.711009 TGGACATGGAGTTTCTGTTCCT 59.289 45.455 0.00 0.00 34.48 3.36
134 135 3.140325 TGGACATGGAGTTTCTGTTCC 57.860 47.619 0.00 0.00 0.00 3.62
135 136 5.712152 AAATGGACATGGAGTTTCTGTTC 57.288 39.130 0.00 0.00 0.00 3.18
136 137 6.324770 AGAAAAATGGACATGGAGTTTCTGTT 59.675 34.615 0.00 0.00 33.72 3.16
137 138 5.835280 AGAAAAATGGACATGGAGTTTCTGT 59.165 36.000 0.00 0.00 33.72 3.41
138 139 6.208204 AGAGAAAAATGGACATGGAGTTTCTG 59.792 38.462 13.55 0.00 34.80 3.02
139 140 6.310149 AGAGAAAAATGGACATGGAGTTTCT 58.690 36.000 0.00 3.51 36.74 2.52
140 141 6.432472 AGAGAGAAAAATGGACATGGAGTTTC 59.568 38.462 0.00 0.00 0.00 2.78
141 142 6.310149 AGAGAGAAAAATGGACATGGAGTTT 58.690 36.000 0.00 0.00 0.00 2.66
142 143 5.885465 AGAGAGAAAAATGGACATGGAGTT 58.115 37.500 0.00 0.00 0.00 3.01
143 144 5.250313 AGAGAGAGAAAAATGGACATGGAGT 59.750 40.000 0.00 0.00 0.00 3.85
144 145 5.743117 AGAGAGAGAAAAATGGACATGGAG 58.257 41.667 0.00 0.00 0.00 3.86
145 146 5.768980 AGAGAGAGAAAAATGGACATGGA 57.231 39.130 0.00 0.00 0.00 3.41
146 147 6.830873 AAAGAGAGAGAAAAATGGACATGG 57.169 37.500 0.00 0.00 0.00 3.66
194 195 8.765219 CGAGGTATCACGATTCATTTAAAAGAT 58.235 33.333 0.00 0.00 0.00 2.40
195 196 7.977293 TCGAGGTATCACGATTCATTTAAAAGA 59.023 33.333 0.00 0.00 31.48 2.52
196 197 8.056571 GTCGAGGTATCACGATTCATTTAAAAG 58.943 37.037 0.00 0.00 38.18 2.27
197 198 7.762615 AGTCGAGGTATCACGATTCATTTAAAA 59.237 33.333 0.00 0.00 38.18 1.52
198 199 7.262772 AGTCGAGGTATCACGATTCATTTAAA 58.737 34.615 0.00 0.00 38.18 1.52
199 200 6.802608 AGTCGAGGTATCACGATTCATTTAA 58.197 36.000 0.00 0.00 38.18 1.52
200 201 6.387041 AGTCGAGGTATCACGATTCATTTA 57.613 37.500 0.00 0.00 38.18 1.40
201 202 5.263968 AGTCGAGGTATCACGATTCATTT 57.736 39.130 0.00 0.00 38.18 2.32
202 203 4.920640 AGTCGAGGTATCACGATTCATT 57.079 40.909 0.00 0.00 38.18 2.57
203 204 4.338400 TGAAGTCGAGGTATCACGATTCAT 59.662 41.667 12.74 0.00 38.18 2.57
204 205 3.692593 TGAAGTCGAGGTATCACGATTCA 59.307 43.478 12.74 12.74 38.18 2.57
205 206 4.288670 TGAAGTCGAGGTATCACGATTC 57.711 45.455 0.00 5.23 38.18 2.52
206 207 4.338400 TCATGAAGTCGAGGTATCACGATT 59.662 41.667 0.00 0.00 38.18 3.34
207 208 3.883489 TCATGAAGTCGAGGTATCACGAT 59.117 43.478 0.00 0.00 38.18 3.73
208 209 3.275999 TCATGAAGTCGAGGTATCACGA 58.724 45.455 0.00 0.00 33.87 4.35
209 210 3.692791 TCATGAAGTCGAGGTATCACG 57.307 47.619 0.00 0.00 0.00 4.35
210 211 7.867909 TGATTAATCATGAAGTCGAGGTATCAC 59.132 37.037 14.23 0.00 0.00 3.06
211 212 7.867909 GTGATTAATCATGAAGTCGAGGTATCA 59.132 37.037 20.65 0.00 39.30 2.15
212 213 7.867909 TGTGATTAATCATGAAGTCGAGGTATC 59.132 37.037 20.65 3.47 39.30 2.24
213 214 7.726216 TGTGATTAATCATGAAGTCGAGGTAT 58.274 34.615 20.65 0.00 39.30 2.73
214 215 7.107639 TGTGATTAATCATGAAGTCGAGGTA 57.892 36.000 20.65 0.00 39.30 3.08
215 216 5.977635 TGTGATTAATCATGAAGTCGAGGT 58.022 37.500 20.65 0.00 39.30 3.85
216 217 6.908870 TTGTGATTAATCATGAAGTCGAGG 57.091 37.500 20.65 0.00 39.30 4.63
217 218 8.824781 AGAATTGTGATTAATCATGAAGTCGAG 58.175 33.333 20.65 0.00 39.30 4.04
218 219 8.722480 AGAATTGTGATTAATCATGAAGTCGA 57.278 30.769 20.65 7.52 39.30 4.20
219 220 8.824781 AGAGAATTGTGATTAATCATGAAGTCG 58.175 33.333 20.65 0.00 39.30 4.18
220 221 9.932699 CAGAGAATTGTGATTAATCATGAAGTC 57.067 33.333 20.65 21.10 39.30 3.01
221 222 8.404000 GCAGAGAATTGTGATTAATCATGAAGT 58.596 33.333 20.65 15.07 39.30 3.01
222 223 8.403236 TGCAGAGAATTGTGATTAATCATGAAG 58.597 33.333 20.65 6.11 39.30 3.02
223 224 8.283699 TGCAGAGAATTGTGATTAATCATGAA 57.716 30.769 20.65 16.05 39.30 2.57
224 225 7.868906 TGCAGAGAATTGTGATTAATCATGA 57.131 32.000 20.65 12.70 39.30 3.07
225 226 8.349983 TCATGCAGAGAATTGTGATTAATCATG 58.650 33.333 20.65 12.96 39.30 3.07
226 227 8.459911 TCATGCAGAGAATTGTGATTAATCAT 57.540 30.769 20.65 5.22 39.30 2.45
227 228 7.868906 TCATGCAGAGAATTGTGATTAATCA 57.131 32.000 14.23 14.23 0.00 2.57
242 243 3.181499 GCATTGACCTTTCTCATGCAGAG 60.181 47.826 0.00 0.00 46.14 3.35
243 244 2.751259 GCATTGACCTTTCTCATGCAGA 59.249 45.455 0.00 0.00 38.27 4.26
244 245 2.159282 GGCATTGACCTTTCTCATGCAG 60.159 50.000 4.93 0.00 39.29 4.41
245 246 1.820519 GGCATTGACCTTTCTCATGCA 59.179 47.619 4.93 0.00 39.29 3.96
246 247 1.135721 GGGCATTGACCTTTCTCATGC 59.864 52.381 0.00 0.00 37.93 4.06
247 248 2.165030 GTGGGCATTGACCTTTCTCATG 59.835 50.000 10.60 0.00 0.00 3.07
248 249 2.225091 TGTGGGCATTGACCTTTCTCAT 60.225 45.455 10.60 0.00 0.00 2.90
249 250 1.144708 TGTGGGCATTGACCTTTCTCA 59.855 47.619 10.60 0.00 0.00 3.27
250 251 1.909700 TGTGGGCATTGACCTTTCTC 58.090 50.000 10.60 0.00 0.00 2.87
251 252 2.380064 TTGTGGGCATTGACCTTTCT 57.620 45.000 10.60 0.00 0.00 2.52
252 253 4.021544 TGTTATTGTGGGCATTGACCTTTC 60.022 41.667 10.60 1.23 0.00 2.62
253 254 3.900601 TGTTATTGTGGGCATTGACCTTT 59.099 39.130 10.60 0.00 0.00 3.11
254 255 3.258123 GTGTTATTGTGGGCATTGACCTT 59.742 43.478 10.60 0.00 0.00 3.50
255 256 2.825532 GTGTTATTGTGGGCATTGACCT 59.174 45.455 10.60 0.00 0.00 3.85
256 257 2.560542 TGTGTTATTGTGGGCATTGACC 59.439 45.455 0.00 0.00 0.00 4.02
257 258 3.932545 TGTGTTATTGTGGGCATTGAC 57.067 42.857 0.00 0.00 0.00 3.18
258 259 3.831333 ACATGTGTTATTGTGGGCATTGA 59.169 39.130 0.00 0.00 0.00 2.57
259 260 4.191033 ACATGTGTTATTGTGGGCATTG 57.809 40.909 0.00 0.00 0.00 2.82
260 261 4.769488 TGTACATGTGTTATTGTGGGCATT 59.231 37.500 9.11 0.00 0.00 3.56
261 262 4.339748 TGTACATGTGTTATTGTGGGCAT 58.660 39.130 9.11 0.00 0.00 4.40
262 263 3.756117 TGTACATGTGTTATTGTGGGCA 58.244 40.909 9.11 0.00 0.00 5.36
263 264 4.439974 CCATGTACATGTGTTATTGTGGGC 60.440 45.833 29.25 0.00 37.11 5.36
264 265 4.704540 ACCATGTACATGTGTTATTGTGGG 59.295 41.667 29.25 14.96 37.11 4.61
265 266 5.414144 TCACCATGTACATGTGTTATTGTGG 59.586 40.000 29.25 16.89 37.11 4.17
266 267 6.493449 TCACCATGTACATGTGTTATTGTG 57.507 37.500 29.25 25.53 37.11 3.33
267 268 6.072175 GGTTCACCATGTACATGTGTTATTGT 60.072 38.462 29.25 17.51 37.11 2.71
268 269 6.072230 TGGTTCACCATGTACATGTGTTATTG 60.072 38.462 29.25 16.94 42.01 1.90
269 270 6.007076 TGGTTCACCATGTACATGTGTTATT 58.993 36.000 29.25 7.97 42.01 1.40
270 271 5.565509 TGGTTCACCATGTACATGTGTTAT 58.434 37.500 29.25 10.56 42.01 1.89
271 272 4.974399 TGGTTCACCATGTACATGTGTTA 58.026 39.130 29.25 17.35 42.01 2.41
336 340 4.733542 GTGGCTTAGGGGCGGCAA 62.734 66.667 12.47 0.00 44.11 4.52
355 359 0.452184 CGTCGTAGTGGAGAGCATGT 59.548 55.000 0.00 0.00 0.00 3.21
383 387 0.180642 TTGACTTTGGGTGGTGCGTA 59.819 50.000 0.00 0.00 0.00 4.42
501 505 1.882989 GCGCTCCTAGGATGGGCTAG 61.883 65.000 27.74 13.02 36.20 3.42
530 534 4.371417 AGTGCATGGTGGGCTGGG 62.371 66.667 0.00 0.00 0.00 4.45
531 535 2.753043 GAGTGCATGGTGGGCTGG 60.753 66.667 0.00 0.00 0.00 4.85
532 536 2.753043 GGAGTGCATGGTGGGCTG 60.753 66.667 0.00 0.00 0.00 4.85
533 537 4.415150 CGGAGTGCATGGTGGGCT 62.415 66.667 0.00 0.00 0.00 5.19
570 574 4.814294 GTAGTGCTCACGGCGGGG 62.814 72.222 10.28 0.92 45.43 5.73
1027 1052 2.439883 AGCCTCGACGTAGGGGAC 60.440 66.667 19.91 9.71 37.11 4.46
1028 1053 2.439701 CAGCCTCGACGTAGGGGA 60.440 66.667 19.91 0.00 37.11 4.81
1029 1054 4.208686 GCAGCCTCGACGTAGGGG 62.209 72.222 10.70 10.70 37.11 4.79
1030 1055 4.208686 GGCAGCCTCGACGTAGGG 62.209 72.222 3.29 0.00 37.11 3.53
1031 1056 4.554363 CGGCAGCCTCGACGTAGG 62.554 72.222 10.54 0.00 39.87 3.18
1032 1057 3.506096 TCGGCAGCCTCGACGTAG 61.506 66.667 10.54 0.00 0.00 3.51
1055 1080 1.934463 CACGTGAAGCTTTGCTCGT 59.066 52.632 10.90 4.89 38.25 4.18
1107 1132 1.003718 CGACCCCGGCTTCTTCTTT 60.004 57.895 0.00 0.00 0.00 2.52
1339 1364 2.745884 CGCCATCTTGACCGGCAA 60.746 61.111 0.00 6.22 46.60 4.52
1385 1410 1.337817 CGACGCCGACTTCTTCAGTG 61.338 60.000 0.00 0.00 35.01 3.66
1386 1411 1.081376 CGACGCCGACTTCTTCAGT 60.081 57.895 0.00 0.00 39.07 3.41
1705 1730 2.253392 GCACGAAGCAAATCCAAGAG 57.747 50.000 0.00 0.00 44.79 2.85
1785 1826 6.825944 TTGGAATATGGACAATCGAACAAA 57.174 33.333 0.00 0.00 0.00 2.83
1786 1827 7.026631 GATTGGAATATGGACAATCGAACAA 57.973 36.000 9.93 0.00 40.47 2.83
1808 1849 0.179119 GTCGTCGGGAATTGGTCGAT 60.179 55.000 0.00 0.00 35.35 3.59
1829 1870 6.110707 GTCTCAATCTATCGTAAAAACCCCA 58.889 40.000 0.00 0.00 0.00 4.96
1830 1871 6.110707 TGTCTCAATCTATCGTAAAAACCCC 58.889 40.000 0.00 0.00 0.00 4.95
1834 1875 9.087424 CACATCTGTCTCAATCTATCGTAAAAA 57.913 33.333 0.00 0.00 0.00 1.94
1844 1885 4.040829 TGGAACACACATCTGTCTCAATCT 59.959 41.667 0.00 0.00 0.00 2.40
1866 1910 1.259770 CGGCATGACAAGATCGATGTG 59.740 52.381 0.54 3.08 0.00 3.21
1908 2286 7.766738 ACCTTTTTACGGTTTTCAATCACATTT 59.233 29.630 0.00 0.00 0.00 2.32
1909 2287 7.269316 ACCTTTTTACGGTTTTCAATCACATT 58.731 30.769 0.00 0.00 0.00 2.71
1910 2288 6.811954 ACCTTTTTACGGTTTTCAATCACAT 58.188 32.000 0.00 0.00 0.00 3.21
1911 2289 6.210287 ACCTTTTTACGGTTTTCAATCACA 57.790 33.333 0.00 0.00 0.00 3.58
1912 2290 8.806177 ATTACCTTTTTACGGTTTTCAATCAC 57.194 30.769 0.00 0.00 35.98 3.06
1913 2291 8.630917 TGATTACCTTTTTACGGTTTTCAATCA 58.369 29.630 0.00 0.00 35.23 2.57
1914 2292 9.465985 TTGATTACCTTTTTACGGTTTTCAATC 57.534 29.630 0.00 0.00 33.26 2.67
1915 2293 9.819267 TTTGATTACCTTTTTACGGTTTTCAAT 57.181 25.926 0.00 0.00 35.74 2.57
1916 2294 9.819267 ATTTGATTACCTTTTTACGGTTTTCAA 57.181 25.926 0.00 0.00 34.85 2.69
1917 2295 9.250624 CATTTGATTACCTTTTTACGGTTTTCA 57.749 29.630 0.00 0.00 35.98 2.69
1918 2296 8.705134 CCATTTGATTACCTTTTTACGGTTTTC 58.295 33.333 0.00 0.00 35.98 2.29
1919 2297 7.171848 GCCATTTGATTACCTTTTTACGGTTTT 59.828 33.333 0.00 0.00 35.98 2.43
1920 2298 6.647481 GCCATTTGATTACCTTTTTACGGTTT 59.353 34.615 0.00 0.00 35.98 3.27
1921 2299 6.014925 AGCCATTTGATTACCTTTTTACGGTT 60.015 34.615 0.00 0.00 35.98 4.44
1922 2300 5.479027 AGCCATTTGATTACCTTTTTACGGT 59.521 36.000 0.00 0.00 38.55 4.83
1923 2301 5.961272 AGCCATTTGATTACCTTTTTACGG 58.039 37.500 0.00 0.00 0.00 4.02
1924 2302 6.033966 GGAGCCATTTGATTACCTTTTTACG 58.966 40.000 0.00 0.00 0.00 3.18
1925 2303 6.338146 GGGAGCCATTTGATTACCTTTTTAC 58.662 40.000 0.00 0.00 0.00 2.01
1926 2304 5.423931 GGGGAGCCATTTGATTACCTTTTTA 59.576 40.000 0.00 0.00 0.00 1.52
1927 2305 4.225042 GGGGAGCCATTTGATTACCTTTTT 59.775 41.667 0.00 0.00 0.00 1.94
1928 2306 3.774766 GGGGAGCCATTTGATTACCTTTT 59.225 43.478 0.00 0.00 0.00 2.27
1929 2307 3.374764 GGGGAGCCATTTGATTACCTTT 58.625 45.455 0.00 0.00 0.00 3.11
1932 2310 1.318576 CGGGGAGCCATTTGATTACC 58.681 55.000 0.00 0.00 0.00 2.85
1935 2313 3.939564 GCGGGGAGCCATTTGATT 58.060 55.556 0.00 0.00 40.81 2.57
1988 2366 9.246670 TGATGTTTGATGAATAGATGGAAGTTT 57.753 29.630 0.00 0.00 0.00 2.66
1990 2368 8.847196 CATGATGTTTGATGAATAGATGGAAGT 58.153 33.333 0.00 0.00 0.00 3.01
1991 2369 9.063615 TCATGATGTTTGATGAATAGATGGAAG 57.936 33.333 0.00 0.00 0.00 3.46
1994 2372 8.161699 TGTCATGATGTTTGATGAATAGATGG 57.838 34.615 0.00 0.00 30.45 3.51
1995 2373 7.803659 GCTGTCATGATGTTTGATGAATAGATG 59.196 37.037 0.00 0.00 30.45 2.90
2006 2384 5.283294 TGTTCTTTGCTGTCATGATGTTTG 58.717 37.500 0.00 0.00 0.00 2.93
2008 2386 5.717078 ATGTTCTTTGCTGTCATGATGTT 57.283 34.783 0.00 0.00 0.00 2.71
2010 2388 6.673154 TCTATGTTCTTTGCTGTCATGATG 57.327 37.500 0.00 0.00 0.00 3.07
2018 2396 9.515020 TTTTTGTTACTTCTATGTTCTTTGCTG 57.485 29.630 0.00 0.00 0.00 4.41
2045 2426 9.649167 CTAGATGATCTACATACATTGATGCAA 57.351 33.333 0.00 0.00 39.56 4.08
2047 2428 7.043524 CGCTAGATGATCTACATACATTGATGC 60.044 40.741 0.00 0.00 39.56 3.91
2050 2431 7.530863 GTCGCTAGATGATCTACATACATTGA 58.469 38.462 0.00 0.00 39.56 2.57
2052 2433 6.371825 TCGTCGCTAGATGATCTACATACATT 59.628 38.462 0.00 0.00 39.56 2.71
2057 2438 4.320023 AGTCGTCGCTAGATGATCTACAT 58.680 43.478 0.00 0.00 43.54 2.29
2064 2445 2.031807 GCTTGTAGTCGTCGCTAGATGA 59.968 50.000 0.00 0.00 39.89 2.92
2067 2448 1.129998 GTGCTTGTAGTCGTCGCTAGA 59.870 52.381 0.00 0.00 0.00 2.43
2075 2456 0.633733 CGCTTACGTGCTTGTAGTCG 59.366 55.000 0.00 0.00 33.53 4.18
2076 2457 1.912110 CTCGCTTACGTGCTTGTAGTC 59.088 52.381 0.00 0.00 41.18 2.59
2103 2484 1.276844 GGCGATGATAGCAACGTGC 59.723 57.895 12.27 0.91 45.46 5.34
2104 2485 1.498865 GGGGCGATGATAGCAACGTG 61.499 60.000 12.27 0.00 41.64 4.49
2105 2486 1.227556 GGGGCGATGATAGCAACGT 60.228 57.895 12.27 0.00 41.64 3.99
2106 2487 0.946221 GAGGGGCGATGATAGCAACG 60.946 60.000 6.25 6.25 42.38 4.10
2108 2489 1.754745 GGAGGGGCGATGATAGCAA 59.245 57.895 0.00 0.00 36.08 3.91
2109 2490 2.217038 GGGAGGGGCGATGATAGCA 61.217 63.158 0.00 0.00 36.08 3.49
2110 2491 1.893919 GAGGGAGGGGCGATGATAGC 61.894 65.000 0.00 0.00 0.00 2.97
2112 2493 1.606601 CGAGGGAGGGGCGATGATA 60.607 63.158 0.00 0.00 0.00 2.15
2113 2494 2.919856 CGAGGGAGGGGCGATGAT 60.920 66.667 0.00 0.00 0.00 2.45
2131 2512 3.259633 AAGGCTTGTCTGGCTCCCG 62.260 63.158 0.00 0.00 42.20 5.14
2132 2513 1.676967 CAAGGCTTGTCTGGCTCCC 60.677 63.158 19.07 0.00 42.20 4.30
2137 2518 0.670162 CCACAACAAGGCTTGTCTGG 59.330 55.000 31.24 29.80 44.59 3.86
2138 2519 1.392589 ACCACAACAAGGCTTGTCTG 58.607 50.000 31.24 28.32 44.59 3.51
2153 2534 3.560068 ACGACTTCTTCATTGTCAACCAC 59.440 43.478 0.00 0.00 0.00 4.16
2155 2536 3.807622 TGACGACTTCTTCATTGTCAACC 59.192 43.478 0.00 0.00 36.50 3.77
2158 2539 3.433274 GCATGACGACTTCTTCATTGTCA 59.567 43.478 0.00 0.00 42.17 3.58
2161 2542 4.259570 CGTAGCATGACGACTTCTTCATTG 60.260 45.833 0.00 0.00 45.82 2.82
2163 2544 3.128764 TCGTAGCATGACGACTTCTTCAT 59.871 43.478 5.60 0.00 46.43 2.57
2165 2546 3.132629 TCGTAGCATGACGACTTCTTC 57.867 47.619 5.60 0.00 46.43 2.87
2176 2557 3.195661 GTTCCTTTAGGGTCGTAGCATG 58.804 50.000 0.00 0.00 36.25 4.06
2177 2558 2.835764 TGTTCCTTTAGGGTCGTAGCAT 59.164 45.455 0.00 0.00 36.25 3.79
2183 2564 4.506654 CGATGTATTGTTCCTTTAGGGTCG 59.493 45.833 0.00 0.00 36.25 4.79
2184 2565 4.814771 CCGATGTATTGTTCCTTTAGGGTC 59.185 45.833 0.00 0.00 36.25 4.46
2185 2566 4.472108 TCCGATGTATTGTTCCTTTAGGGT 59.528 41.667 0.00 0.00 36.25 4.34
2186 2567 5.031066 TCCGATGTATTGTTCCTTTAGGG 57.969 43.478 0.00 0.00 35.41 3.53
2187 2568 5.878116 TGTTCCGATGTATTGTTCCTTTAGG 59.122 40.000 0.00 0.00 0.00 2.69
2189 2570 6.149807 GGTTGTTCCGATGTATTGTTCCTTTA 59.850 38.462 0.00 0.00 0.00 1.85
2191 2572 4.457949 GGTTGTTCCGATGTATTGTTCCTT 59.542 41.667 0.00 0.00 0.00 3.36
2194 2575 4.379082 GGTGGTTGTTCCGATGTATTGTTC 60.379 45.833 0.00 0.00 39.52 3.18
2196 2577 3.078837 GGTGGTTGTTCCGATGTATTGT 58.921 45.455 0.00 0.00 39.52 2.71
2197 2578 2.422127 GGGTGGTTGTTCCGATGTATTG 59.578 50.000 0.00 0.00 39.52 1.90
2199 2580 1.913419 AGGGTGGTTGTTCCGATGTAT 59.087 47.619 0.00 0.00 39.52 2.29
2200 2581 1.002659 CAGGGTGGTTGTTCCGATGTA 59.997 52.381 0.00 0.00 39.52 2.29
2204 2585 2.112297 GCAGGGTGGTTGTTCCGA 59.888 61.111 0.00 0.00 39.52 4.55
2205 2586 2.983592 GGCAGGGTGGTTGTTCCG 60.984 66.667 0.00 0.00 39.52 4.30
2206 2587 2.600470 GGGCAGGGTGGTTGTTCC 60.600 66.667 0.00 0.00 0.00 3.62
2212 2596 1.434513 TTCTTCATGGGCAGGGTGGT 61.435 55.000 0.00 0.00 0.00 4.16
2214 2598 1.547372 CTTTTCTTCATGGGCAGGGTG 59.453 52.381 0.00 0.00 0.00 4.61
2215 2599 1.147817 ACTTTTCTTCATGGGCAGGGT 59.852 47.619 0.00 0.00 0.00 4.34
2217 2601 2.242043 ACACTTTTCTTCATGGGCAGG 58.758 47.619 0.00 0.00 0.00 4.85
2219 2603 4.365514 TCTACACTTTTCTTCATGGGCA 57.634 40.909 0.00 0.00 0.00 5.36
2223 2607 7.116948 ACACTTCGATCTACACTTTTCTTCATG 59.883 37.037 0.00 0.00 0.00 3.07
2226 2610 7.359347 GGAACACTTCGATCTACACTTTTCTTC 60.359 40.741 0.00 0.00 0.00 2.87
2231 2615 5.209818 TGGAACACTTCGATCTACACTTT 57.790 39.130 0.00 0.00 0.00 2.66
2234 2618 3.678548 GGTTGGAACACTTCGATCTACAC 59.321 47.826 0.00 0.00 39.29 2.90
2235 2619 3.322541 TGGTTGGAACACTTCGATCTACA 59.677 43.478 0.00 0.00 39.29 2.74
2236 2620 3.678548 GTGGTTGGAACACTTCGATCTAC 59.321 47.826 0.00 0.00 39.29 2.59
2237 2621 3.576982 AGTGGTTGGAACACTTCGATCTA 59.423 43.478 0.00 0.00 46.38 1.98
2238 2622 2.368875 AGTGGTTGGAACACTTCGATCT 59.631 45.455 0.00 0.00 46.38 2.75
2239 2623 2.767505 AGTGGTTGGAACACTTCGATC 58.232 47.619 0.00 0.00 46.38 3.69
2240 2624 2.930826 AGTGGTTGGAACACTTCGAT 57.069 45.000 0.00 0.00 46.38 3.59
2242 2626 3.057734 GTCTAGTGGTTGGAACACTTCG 58.942 50.000 3.72 0.00 46.38 3.79
2247 2631 3.916359 TTGTGTCTAGTGGTTGGAACA 57.084 42.857 0.00 0.00 0.00 3.18
2248 2632 5.106078 TGTTTTTGTGTCTAGTGGTTGGAAC 60.106 40.000 0.00 0.00 0.00 3.62
2249 2633 5.010933 TGTTTTTGTGTCTAGTGGTTGGAA 58.989 37.500 0.00 0.00 0.00 3.53
2257 2641 6.597672 TGTTCATCTGTGTTTTTGTGTCTAGT 59.402 34.615 0.00 0.00 0.00 2.57
2258 2642 7.015226 TGTTCATCTGTGTTTTTGTGTCTAG 57.985 36.000 0.00 0.00 0.00 2.43
2267 2651 6.757897 TCAGTCTTTGTTCATCTGTGTTTT 57.242 33.333 0.00 0.00 0.00 2.43
2268 2652 6.757897 TTCAGTCTTTGTTCATCTGTGTTT 57.242 33.333 0.00 0.00 0.00 2.83
2478 2862 1.457643 TCCCCATCCCAGTAGCTCG 60.458 63.158 0.00 0.00 0.00 5.03
2479 2863 0.399233 AGTCCCCATCCCAGTAGCTC 60.399 60.000 0.00 0.00 0.00 4.09
2480 2864 0.941963 TAGTCCCCATCCCAGTAGCT 59.058 55.000 0.00 0.00 0.00 3.32
2481 2865 1.343069 CTAGTCCCCATCCCAGTAGC 58.657 60.000 0.00 0.00 0.00 3.58
2482 2866 2.016905 CCTAGTCCCCATCCCAGTAG 57.983 60.000 0.00 0.00 0.00 2.57
2483 2867 0.105142 GCCTAGTCCCCATCCCAGTA 60.105 60.000 0.00 0.00 0.00 2.74
2484 2868 1.384643 GCCTAGTCCCCATCCCAGT 60.385 63.158 0.00 0.00 0.00 4.00
2485 2869 1.384502 TGCCTAGTCCCCATCCCAG 60.385 63.158 0.00 0.00 0.00 4.45
2486 2870 1.384502 CTGCCTAGTCCCCATCCCA 60.385 63.158 0.00 0.00 0.00 4.37
2487 2871 2.150051 CCTGCCTAGTCCCCATCCC 61.150 68.421 0.00 0.00 0.00 3.85
2488 2872 2.150051 CCCTGCCTAGTCCCCATCC 61.150 68.421 0.00 0.00 0.00 3.51
2489 2873 1.074471 TCCCTGCCTAGTCCCCATC 60.074 63.158 0.00 0.00 0.00 3.51
2490 2874 1.074167 CTCCCTGCCTAGTCCCCAT 60.074 63.158 0.00 0.00 0.00 4.00
2491 2875 1.821966 TTCTCCCTGCCTAGTCCCCA 61.822 60.000 0.00 0.00 0.00 4.96
2492 2876 1.003051 TTCTCCCTGCCTAGTCCCC 59.997 63.158 0.00 0.00 0.00 4.81
2493 2877 1.338890 GGTTCTCCCTGCCTAGTCCC 61.339 65.000 0.00 0.00 0.00 4.46
2494 2878 0.325765 AGGTTCTCCCTGCCTAGTCC 60.326 60.000 0.00 0.00 44.08 3.85
2495 2879 1.574263 AAGGTTCTCCCTGCCTAGTC 58.426 55.000 0.00 0.00 45.47 2.59
2496 2880 2.942604 TAAGGTTCTCCCTGCCTAGT 57.057 50.000 0.00 0.00 45.47 2.57
2497 2881 4.164221 TGAAATAAGGTTCTCCCTGCCTAG 59.836 45.833 0.00 0.00 45.47 3.02
2498 2882 4.108570 TGAAATAAGGTTCTCCCTGCCTA 58.891 43.478 0.00 0.00 45.47 3.93
2499 2883 2.919602 TGAAATAAGGTTCTCCCTGCCT 59.080 45.455 0.00 0.00 45.47 4.75
2500 2884 3.366052 TGAAATAAGGTTCTCCCTGCC 57.634 47.619 0.00 0.00 45.47 4.85
2501 2885 4.786425 AGATGAAATAAGGTTCTCCCTGC 58.214 43.478 0.00 0.00 45.47 4.85
2502 2886 6.541641 CAGAAGATGAAATAAGGTTCTCCCTG 59.458 42.308 0.00 0.00 45.47 4.45
2503 2887 6.445139 TCAGAAGATGAAATAAGGTTCTCCCT 59.555 38.462 0.00 0.00 39.46 4.20
2504 2888 6.653989 TCAGAAGATGAAATAAGGTTCTCCC 58.346 40.000 0.00 0.00 34.02 4.30
2505 2889 7.279758 CACTCAGAAGATGAAATAAGGTTCTCC 59.720 40.741 0.00 0.00 37.52 3.71
2506 2890 7.201600 GCACTCAGAAGATGAAATAAGGTTCTC 60.202 40.741 0.00 0.00 37.52 2.87
2507 2891 6.597280 GCACTCAGAAGATGAAATAAGGTTCT 59.403 38.462 0.00 0.00 37.52 3.01
2508 2892 6.183360 GGCACTCAGAAGATGAAATAAGGTTC 60.183 42.308 0.00 0.00 37.52 3.62
2509 2893 5.649831 GGCACTCAGAAGATGAAATAAGGTT 59.350 40.000 0.00 0.00 37.52 3.50
2510 2894 5.189180 GGCACTCAGAAGATGAAATAAGGT 58.811 41.667 0.00 0.00 37.52 3.50
2511 2895 4.272018 CGGCACTCAGAAGATGAAATAAGG 59.728 45.833 0.00 0.00 37.52 2.69
2512 2896 4.260538 GCGGCACTCAGAAGATGAAATAAG 60.261 45.833 0.00 0.00 37.52 1.73
2513 2897 3.623060 GCGGCACTCAGAAGATGAAATAA 59.377 43.478 0.00 0.00 37.52 1.40
2514 2898 3.198068 GCGGCACTCAGAAGATGAAATA 58.802 45.455 0.00 0.00 37.52 1.40
2515 2899 2.012673 GCGGCACTCAGAAGATGAAAT 58.987 47.619 0.00 0.00 37.52 2.17
2516 2900 1.442769 GCGGCACTCAGAAGATGAAA 58.557 50.000 0.00 0.00 37.52 2.69
2517 2901 0.391661 GGCGGCACTCAGAAGATGAA 60.392 55.000 3.07 0.00 37.52 2.57
2518 2902 1.219124 GGCGGCACTCAGAAGATGA 59.781 57.895 3.07 0.00 36.21 2.92
2519 2903 2.169789 CGGCGGCACTCAGAAGATG 61.170 63.158 10.53 0.00 0.00 2.90
2520 2904 2.185350 CGGCGGCACTCAGAAGAT 59.815 61.111 10.53 0.00 0.00 2.40
2521 2905 4.742201 GCGGCGGCACTCAGAAGA 62.742 66.667 9.78 0.00 39.62 2.87
2537 2921 4.980805 TCGTGAAGGCGGTGTGGC 62.981 66.667 0.00 0.00 45.27 5.01
2538 2922 2.280524 TTCGTGAAGGCGGTGTGG 60.281 61.111 0.00 0.00 0.00 4.17
2539 2923 1.831389 CTGTTCGTGAAGGCGGTGTG 61.831 60.000 0.00 0.00 0.00 3.82
2540 2924 1.594293 CTGTTCGTGAAGGCGGTGT 60.594 57.895 0.00 0.00 0.00 4.16
2541 2925 2.317609 CCTGTTCGTGAAGGCGGTG 61.318 63.158 0.00 0.00 0.00 4.94
2542 2926 2.030562 CCTGTTCGTGAAGGCGGT 59.969 61.111 0.00 0.00 0.00 5.68
2543 2927 2.027625 GTCCTGTTCGTGAAGGCGG 61.028 63.158 0.00 0.00 33.25 6.13
2544 2928 0.878523 TTGTCCTGTTCGTGAAGGCG 60.879 55.000 0.00 0.00 33.25 5.52
2545 2929 1.305201 TTTGTCCTGTTCGTGAAGGC 58.695 50.000 0.00 0.00 33.25 4.35
2546 2930 2.287009 GCTTTTGTCCTGTTCGTGAAGG 60.287 50.000 0.00 0.00 34.65 3.46
2547 2931 2.599848 CGCTTTTGTCCTGTTCGTGAAG 60.600 50.000 0.00 0.00 0.00 3.02
2548 2932 1.329292 CGCTTTTGTCCTGTTCGTGAA 59.671 47.619 0.00 0.00 0.00 3.18
2549 2933 0.934496 CGCTTTTGTCCTGTTCGTGA 59.066 50.000 0.00 0.00 0.00 4.35
2550 2934 0.657368 GCGCTTTTGTCCTGTTCGTG 60.657 55.000 0.00 0.00 0.00 4.35
2551 2935 0.814010 AGCGCTTTTGTCCTGTTCGT 60.814 50.000 2.64 0.00 0.00 3.85
2552 2936 1.144969 TAGCGCTTTTGTCCTGTTCG 58.855 50.000 18.68 0.00 0.00 3.95
2553 2937 3.242936 TGTTTAGCGCTTTTGTCCTGTTC 60.243 43.478 18.68 0.00 0.00 3.18
2554 2938 2.685897 TGTTTAGCGCTTTTGTCCTGTT 59.314 40.909 18.68 0.00 0.00 3.16
2555 2939 2.294074 TGTTTAGCGCTTTTGTCCTGT 58.706 42.857 18.68 0.00 0.00 4.00
2556 2940 3.559238 ATGTTTAGCGCTTTTGTCCTG 57.441 42.857 18.68 0.00 0.00 3.86
2557 2941 4.324267 AGTATGTTTAGCGCTTTTGTCCT 58.676 39.130 18.68 0.75 0.00 3.85
2558 2942 4.680171 AGTATGTTTAGCGCTTTTGTCC 57.320 40.909 18.68 0.00 0.00 4.02
2559 2943 8.414923 GTTTTTAGTATGTTTAGCGCTTTTGTC 58.585 33.333 18.68 2.90 0.00 3.18
2560 2944 7.916450 TGTTTTTAGTATGTTTAGCGCTTTTGT 59.084 29.630 18.68 0.70 0.00 2.83
2561 2945 8.205297 GTGTTTTTAGTATGTTTAGCGCTTTTG 58.795 33.333 18.68 0.00 0.00 2.44
2562 2946 7.916450 TGTGTTTTTAGTATGTTTAGCGCTTTT 59.084 29.630 18.68 0.00 0.00 2.27
2563 2947 7.377662 GTGTGTTTTTAGTATGTTTAGCGCTTT 59.622 33.333 18.68 0.00 0.00 3.51
2564 2948 6.854381 GTGTGTTTTTAGTATGTTTAGCGCTT 59.146 34.615 18.68 0.00 0.00 4.68
2565 2949 6.368213 GTGTGTTTTTAGTATGTTTAGCGCT 58.632 36.000 17.26 17.26 0.00 5.92
2566 2950 5.566395 GGTGTGTTTTTAGTATGTTTAGCGC 59.434 40.000 0.00 0.00 0.00 5.92
2567 2951 6.894828 AGGTGTGTTTTTAGTATGTTTAGCG 58.105 36.000 0.00 0.00 0.00 4.26
2576 2960 9.738832 GCTTCAATTTTAGGTGTGTTTTTAGTA 57.261 29.630 0.00 0.00 0.00 1.82
2577 2961 8.254508 TGCTTCAATTTTAGGTGTGTTTTTAGT 58.745 29.630 0.00 0.00 0.00 2.24
2578 2962 8.641499 TGCTTCAATTTTAGGTGTGTTTTTAG 57.359 30.769 0.00 0.00 0.00 1.85
2579 2963 9.039870 CATGCTTCAATTTTAGGTGTGTTTTTA 57.960 29.630 0.00 0.00 0.00 1.52
2580 2964 7.768120 TCATGCTTCAATTTTAGGTGTGTTTTT 59.232 29.630 0.00 0.00 0.00 1.94
2581 2965 7.271511 TCATGCTTCAATTTTAGGTGTGTTTT 58.728 30.769 0.00 0.00 0.00 2.43
2582 2966 6.815089 TCATGCTTCAATTTTAGGTGTGTTT 58.185 32.000 0.00 0.00 0.00 2.83
2583 2967 6.403866 TCATGCTTCAATTTTAGGTGTGTT 57.596 33.333 0.00 0.00 0.00 3.32
2584 2968 5.565439 GCTCATGCTTCAATTTTAGGTGTGT 60.565 40.000 0.00 0.00 36.03 3.72
2585 2969 4.860907 GCTCATGCTTCAATTTTAGGTGTG 59.139 41.667 0.00 0.00 36.03 3.82
2586 2970 4.082026 GGCTCATGCTTCAATTTTAGGTGT 60.082 41.667 0.00 0.00 39.59 4.16
2587 2971 4.427312 GGCTCATGCTTCAATTTTAGGTG 58.573 43.478 0.00 0.00 39.59 4.00
2588 2972 3.448660 GGGCTCATGCTTCAATTTTAGGT 59.551 43.478 0.00 0.00 39.59 3.08
2589 2973 3.703052 AGGGCTCATGCTTCAATTTTAGG 59.297 43.478 0.00 0.00 39.59 2.69
2590 2974 4.202090 GGAGGGCTCATGCTTCAATTTTAG 60.202 45.833 0.00 0.00 39.59 1.85
2591 2975 3.701040 GGAGGGCTCATGCTTCAATTTTA 59.299 43.478 0.00 0.00 39.59 1.52
2592 2976 2.498885 GGAGGGCTCATGCTTCAATTTT 59.501 45.455 0.00 0.00 39.59 1.82
2593 2977 2.105766 GGAGGGCTCATGCTTCAATTT 58.894 47.619 0.00 0.00 39.59 1.82
2594 2978 1.772836 GGAGGGCTCATGCTTCAATT 58.227 50.000 0.00 0.00 39.59 2.32
2595 2979 0.465097 CGGAGGGCTCATGCTTCAAT 60.465 55.000 0.00 0.00 39.59 2.57
2596 2980 1.078214 CGGAGGGCTCATGCTTCAA 60.078 57.895 0.00 0.00 39.59 2.69
2597 2981 2.586245 CGGAGGGCTCATGCTTCA 59.414 61.111 0.00 0.00 39.59 3.02
2610 2994 2.825836 GACCCATGCTTGCCGGAG 60.826 66.667 5.05 0.00 0.00 4.63
2611 2995 3.626996 CTGACCCATGCTTGCCGGA 62.627 63.158 5.05 0.00 0.00 5.14
2612 2996 3.136123 CTGACCCATGCTTGCCGG 61.136 66.667 0.00 0.00 0.00 6.13
2613 2997 2.898920 ATCCTGACCCATGCTTGCCG 62.899 60.000 0.00 0.00 0.00 5.69
2614 2998 1.076485 ATCCTGACCCATGCTTGCC 60.076 57.895 0.00 0.00 0.00 4.52
2615 2999 1.105759 GGATCCTGACCCATGCTTGC 61.106 60.000 3.84 0.00 0.00 4.01
2616 3000 0.256752 TGGATCCTGACCCATGCTTG 59.743 55.000 14.23 0.00 0.00 4.01
2617 3001 1.229131 ATGGATCCTGACCCATGCTT 58.771 50.000 14.23 0.00 41.32 3.91
2618 3002 1.133575 CAATGGATCCTGACCCATGCT 60.134 52.381 14.23 0.00 41.98 3.79
2619 3003 1.325355 CAATGGATCCTGACCCATGC 58.675 55.000 14.23 0.00 41.98 4.06
2620 3004 1.325355 GCAATGGATCCTGACCCATG 58.675 55.000 14.23 2.86 41.98 3.66
2621 3005 0.179009 CGCAATGGATCCTGACCCAT 60.179 55.000 14.23 0.00 44.52 4.00
2622 3006 1.224315 CGCAATGGATCCTGACCCA 59.776 57.895 14.23 0.00 36.79 4.51
2623 3007 2.189499 GCGCAATGGATCCTGACCC 61.189 63.158 14.23 0.00 0.00 4.46
2624 3008 2.189499 GGCGCAATGGATCCTGACC 61.189 63.158 14.23 5.60 0.00 4.02
2625 3009 1.153086 AGGCGCAATGGATCCTGAC 60.153 57.895 14.23 0.00 0.00 3.51
2626 3010 1.146930 GAGGCGCAATGGATCCTGA 59.853 57.895 14.23 0.00 0.00 3.86
2627 3011 1.895707 GGAGGCGCAATGGATCCTG 60.896 63.158 14.23 4.84 0.00 3.86
2628 3012 2.377810 TGGAGGCGCAATGGATCCT 61.378 57.895 14.23 0.00 0.00 3.24
2629 3013 2.189499 GTGGAGGCGCAATGGATCC 61.189 63.158 10.83 4.20 0.00 3.36
2630 3014 2.537560 CGTGGAGGCGCAATGGATC 61.538 63.158 10.83 0.00 0.00 3.36
2631 3015 2.514592 CGTGGAGGCGCAATGGAT 60.515 61.111 10.83 0.00 0.00 3.41
2632 3016 4.776322 CCGTGGAGGCGCAATGGA 62.776 66.667 10.83 0.00 0.00 3.41



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.