Multiple sequence alignment - TraesCS7A01G362900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G362900 chr7A 100.000 4743 0 0 1 4743 537062895 537058153 0.000000e+00 8759.0
1 TraesCS7A01G362900 chr7A 77.719 570 86 16 1774 2340 520796366 520795835 1.280000e-80 311.0
2 TraesCS7A01G362900 chr7A 89.362 188 12 2 4187 4372 14494984 14495165 3.690000e-56 230.0
3 TraesCS7A01G362900 chr7A 96.800 125 4 0 4060 4184 14494808 14494932 4.810000e-50 209.0
4 TraesCS7A01G362900 chr7D 91.591 3734 212 53 377 4057 463037768 463041452 0.000000e+00 5062.0
5 TraesCS7A01G362900 chr7D 89.189 185 14 5 62 244 463035068 463035248 4.780000e-55 226.0
6 TraesCS7A01G362900 chr7B 89.584 3610 235 71 499 4057 488707636 488704117 0.000000e+00 4453.0
7 TraesCS7A01G362900 chr7B 85.906 447 46 7 1768 2213 458528591 458529021 1.200000e-125 460.0
8 TraesCS7A01G362900 chr7B 85.011 447 50 6 1774 2219 662234605 662234175 5.630000e-119 438.0
9 TraesCS7A01G362900 chr7B 88.158 76 6 3 311 384 488708070 488707996 2.350000e-13 87.9
10 TraesCS7A01G362900 chr4A 86.130 447 45 6 1774 2219 705330574 705330144 2.580000e-127 466.0
11 TraesCS7A01G362900 chr4A 79.123 570 79 16 1774 2340 549886380 549885848 1.620000e-94 357.0
12 TraesCS7A01G362900 chr2B 85.906 447 46 7 1768 2213 795843954 795844384 1.200000e-125 460.0
13 TraesCS7A01G362900 chr6A 84.872 390 59 0 3352 3741 219636587 219636976 1.240000e-105 394.0
14 TraesCS7A01G362900 chr6A 89.848 197 12 3 4187 4381 216446286 216446096 3.670000e-61 246.0
15 TraesCS7A01G362900 chr6A 85.356 239 34 1 2354 2592 219636055 219636292 3.670000e-61 246.0
16 TraesCS7A01G362900 chr6A 89.500 200 13 2 4187 4384 359015712 359015519 3.670000e-61 246.0
17 TraesCS7A01G362900 chr6A 89.340 197 11 5 4187 4381 209552045 209551857 6.130000e-59 239.0
18 TraesCS7A01G362900 chr6A 97.600 125 3 0 4060 4184 209552221 209552097 1.030000e-51 215.0
19 TraesCS7A01G362900 chr3D 77.990 577 74 17 1768 2340 608304636 608305163 3.560000e-81 313.0
20 TraesCS7A01G362900 chr6B 77.474 475 74 18 2354 2797 290685465 290685937 2.190000e-63 254.0
21 TraesCS7A01G362900 chr6B 77.474 475 74 18 2354 2797 290707148 290707620 2.190000e-63 254.0
22 TraesCS7A01G362900 chr6B 96.800 125 4 0 4060 4184 188188543 188188419 4.810000e-50 209.0
23 TraesCS7A01G362900 chr3A 89.848 197 12 3 4187 4381 83200274 83200084 3.670000e-61 246.0
24 TraesCS7A01G362900 chr3A 90.957 188 9 2 4187 4372 726082713 726082894 3.670000e-61 246.0
25 TraesCS7A01G362900 chr3A 95.683 139 5 1 4047 4184 726082523 726082661 6.180000e-54 222.0
26 TraesCS7A01G362900 chr3A 96.800 125 4 0 4060 4184 83200450 83200326 4.810000e-50 209.0
27 TraesCS7A01G362900 chr1B 88.832 197 14 2 4187 4381 490210366 490210176 7.940000e-58 235.0
28 TraesCS7A01G362900 chr1B 96.800 125 4 0 4060 4184 7190958 7191082 4.810000e-50 209.0
29 TraesCS7A01G362900 chr1B 87.766 188 10 3 4187 4372 7191134 7191310 1.730000e-49 207.0
30 TraesCS7A01G362900 chrUn 88.000 200 16 2 4187 4384 81420315 81420122 3.690000e-56 230.0
31 TraesCS7A01G362900 chrUn 96.800 125 4 0 4060 4184 81420491 81420367 4.810000e-50 209.0
32 TraesCS7A01G362900 chr5B 96.000 125 5 0 4060 4184 508785237 508785361 2.240000e-48 204.0
33 TraesCS7A01G362900 chr5B 96.000 125 5 0 4060 4184 508787399 508787523 2.240000e-48 204.0
34 TraesCS7A01G362900 chr6D 75.667 300 58 11 1622 1918 160558297 160558584 8.280000e-28 135.0
35 TraesCS7A01G362900 chr2D 84.672 137 11 6 1790 1925 129798783 129798910 1.390000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G362900 chr7A 537058153 537062895 4742 True 8759.00 8759 100.000 1 4743 1 chr7A.!!$R2 4742
1 TraesCS7A01G362900 chr7A 520795835 520796366 531 True 311.00 311 77.719 1774 2340 1 chr7A.!!$R1 566
2 TraesCS7A01G362900 chr7D 463035068 463041452 6384 False 2644.00 5062 90.390 62 4057 2 chr7D.!!$F1 3995
3 TraesCS7A01G362900 chr7B 488704117 488708070 3953 True 2270.45 4453 88.871 311 4057 2 chr7B.!!$R2 3746
4 TraesCS7A01G362900 chr4A 549885848 549886380 532 True 357.00 357 79.123 1774 2340 1 chr4A.!!$R1 566
5 TraesCS7A01G362900 chr6A 219636055 219636976 921 False 320.00 394 85.114 2354 3741 2 chr6A.!!$F1 1387
6 TraesCS7A01G362900 chr3D 608304636 608305163 527 False 313.00 313 77.990 1768 2340 1 chr3D.!!$F1 572
7 TraesCS7A01G362900 chr5B 508785237 508787523 2286 False 204.00 204 96.000 4060 4184 2 chr5B.!!$F1 124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 3184 0.039527 ATTTCTTTTCCGTGGCACGC 60.040 50.0 33.15 0.00 40.91 5.34 F
885 3575 0.179004 GCCTCTCGATCTCTCCTCCA 60.179 60.0 0.00 0.00 0.00 3.86 F
1198 3893 0.249238 CTCGGTAGGTCTCTGCATGC 60.249 60.0 11.82 11.82 0.00 4.06 F
1452 4150 0.517316 GCGACACAGTTGGAATGGAC 59.483 55.0 0.00 0.00 0.00 4.02 F
3083 5850 0.108945 GCTTGCCTTGCCTTGATCAC 60.109 55.0 0.00 0.00 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2116 4836 0.584396 CAACACGCGCCTACAAGAAA 59.416 50.000 5.73 0.00 0.00 2.52 R
2343 5066 2.791004 GTGTGTGTTCAATGCTTCAAGC 59.209 45.455 1.04 1.04 42.82 4.01 R
3065 5832 1.201647 CAGTGATCAAGGCAAGGCAAG 59.798 52.381 0.00 0.00 0.00 4.01 R
3316 6083 7.648142 TGAGTTTTGGTTCATGTTAAGATCAC 58.352 34.615 0.00 0.00 0.00 3.06 R
4255 7087 0.107456 ATGGCATCGGAGCAAGTAGG 59.893 55.000 0.00 0.00 35.83 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.373226 TCACCACTGGCGACTACC 58.627 61.111 0.00 0.00 0.00 3.18
18 19 2.126071 CACCACTGGCGACTACCG 60.126 66.667 0.00 0.00 42.21 4.02
19 20 2.282674 ACCACTGGCGACTACCGA 60.283 61.111 0.00 0.00 41.76 4.69
20 21 2.341101 ACCACTGGCGACTACCGAG 61.341 63.158 0.00 0.00 41.76 4.63
21 22 2.202623 CACTGGCGACTACCGAGC 60.203 66.667 0.00 0.00 41.76 5.03
22 23 2.675423 ACTGGCGACTACCGAGCA 60.675 61.111 0.00 0.00 41.76 4.26
23 24 2.273179 ACTGGCGACTACCGAGCAA 61.273 57.895 0.00 0.00 41.76 3.91
24 25 1.517257 CTGGCGACTACCGAGCAAG 60.517 63.158 0.00 0.00 41.76 4.01
25 26 1.934220 CTGGCGACTACCGAGCAAGA 61.934 60.000 0.00 0.00 41.76 3.02
26 27 1.214589 GGCGACTACCGAGCAAGAA 59.785 57.895 0.00 0.00 41.76 2.52
27 28 0.179108 GGCGACTACCGAGCAAGAAT 60.179 55.000 0.00 0.00 41.76 2.40
28 29 0.924090 GCGACTACCGAGCAAGAATG 59.076 55.000 0.00 0.00 41.76 2.67
29 30 1.469251 GCGACTACCGAGCAAGAATGA 60.469 52.381 0.00 0.00 41.76 2.57
30 31 2.876091 CGACTACCGAGCAAGAATGAA 58.124 47.619 0.00 0.00 41.76 2.57
31 32 2.854777 CGACTACCGAGCAAGAATGAAG 59.145 50.000 0.00 0.00 41.76 3.02
32 33 2.605366 GACTACCGAGCAAGAATGAAGC 59.395 50.000 0.00 0.00 0.00 3.86
33 34 1.936547 CTACCGAGCAAGAATGAAGCC 59.063 52.381 0.00 0.00 0.00 4.35
34 35 1.021390 ACCGAGCAAGAATGAAGCCG 61.021 55.000 0.00 0.00 0.00 5.52
35 36 0.740868 CCGAGCAAGAATGAAGCCGA 60.741 55.000 0.00 0.00 0.00 5.54
36 37 1.078709 CGAGCAAGAATGAAGCCGAA 58.921 50.000 0.00 0.00 0.00 4.30
37 38 1.061711 CGAGCAAGAATGAAGCCGAAG 59.938 52.381 0.00 0.00 0.00 3.79
38 39 2.350522 GAGCAAGAATGAAGCCGAAGA 58.649 47.619 0.00 0.00 0.00 2.87
39 40 2.744202 GAGCAAGAATGAAGCCGAAGAA 59.256 45.455 0.00 0.00 0.00 2.52
40 41 3.149196 AGCAAGAATGAAGCCGAAGAAA 58.851 40.909 0.00 0.00 0.00 2.52
41 42 3.190118 AGCAAGAATGAAGCCGAAGAAAG 59.810 43.478 0.00 0.00 0.00 2.62
42 43 3.189287 GCAAGAATGAAGCCGAAGAAAGA 59.811 43.478 0.00 0.00 0.00 2.52
43 44 4.320494 GCAAGAATGAAGCCGAAGAAAGAA 60.320 41.667 0.00 0.00 0.00 2.52
44 45 5.149977 CAAGAATGAAGCCGAAGAAAGAAC 58.850 41.667 0.00 0.00 0.00 3.01
45 46 3.753797 AGAATGAAGCCGAAGAAAGAACC 59.246 43.478 0.00 0.00 0.00 3.62
46 47 1.508632 TGAAGCCGAAGAAAGAACCG 58.491 50.000 0.00 0.00 0.00 4.44
47 48 0.796927 GAAGCCGAAGAAAGAACCGG 59.203 55.000 0.00 0.00 44.34 5.28
48 49 0.108019 AAGCCGAAGAAAGAACCGGT 59.892 50.000 0.00 0.00 43.51 5.28
49 50 0.971386 AGCCGAAGAAAGAACCGGTA 59.029 50.000 8.00 0.00 43.51 4.02
50 51 1.345415 AGCCGAAGAAAGAACCGGTAA 59.655 47.619 8.00 0.00 43.51 2.85
51 52 2.027469 AGCCGAAGAAAGAACCGGTAAT 60.027 45.455 8.00 0.00 43.51 1.89
52 53 2.095372 GCCGAAGAAAGAACCGGTAATG 59.905 50.000 8.00 0.00 43.51 1.90
53 54 3.592059 CCGAAGAAAGAACCGGTAATGA 58.408 45.455 8.00 0.00 37.40 2.57
54 55 4.189231 CCGAAGAAAGAACCGGTAATGAT 58.811 43.478 8.00 0.00 37.40 2.45
55 56 5.353938 CCGAAGAAAGAACCGGTAATGATA 58.646 41.667 8.00 0.00 37.40 2.15
56 57 5.989777 CCGAAGAAAGAACCGGTAATGATAT 59.010 40.000 8.00 0.00 37.40 1.63
57 58 6.482308 CCGAAGAAAGAACCGGTAATGATATT 59.518 38.462 8.00 0.00 37.40 1.28
58 59 7.345192 CGAAGAAAGAACCGGTAATGATATTG 58.655 38.462 8.00 0.00 0.00 1.90
59 60 7.223971 CGAAGAAAGAACCGGTAATGATATTGA 59.776 37.037 8.00 0.00 0.00 2.57
60 61 8.438676 AAGAAAGAACCGGTAATGATATTGAG 57.561 34.615 8.00 0.00 0.00 3.02
73 74 9.002600 GTAATGATATTGAGCCACATGTCATTA 57.997 33.333 0.00 11.57 36.54 1.90
84 85 5.050091 GCCACATGTCATTAAGTTCGATAGG 60.050 44.000 0.00 0.00 0.00 2.57
89 90 9.832445 ACATGTCATTAAGTTCGATAGGTATTT 57.168 29.630 0.00 0.00 0.00 1.40
99 100 8.888579 AGTTCGATAGGTATTTTCATGTTAGG 57.111 34.615 0.00 0.00 0.00 2.69
149 150 0.391793 TATTCCGTGGCAATGCACGA 60.392 50.000 23.91 11.11 46.46 4.35
150 151 1.922135 ATTCCGTGGCAATGCACGAC 61.922 55.000 23.91 10.44 46.46 4.34
160 162 3.792956 GGCAATGCACGACATTCAATTAG 59.207 43.478 7.79 0.00 46.28 1.73
162 164 5.448496 GGCAATGCACGACATTCAATTAGTA 60.448 40.000 7.79 0.00 46.28 1.82
165 167 7.531871 GCAATGCACGACATTCAATTAGTATAG 59.468 37.037 0.00 0.00 46.28 1.31
219 221 1.850345 GGGGATGGGGATAAGTGTTCA 59.150 52.381 0.00 0.00 0.00 3.18
220 222 2.158608 GGGGATGGGGATAAGTGTTCAG 60.159 54.545 0.00 0.00 0.00 3.02
222 224 3.545703 GGATGGGGATAAGTGTTCAGTG 58.454 50.000 0.00 0.00 0.00 3.66
223 225 3.054361 GGATGGGGATAAGTGTTCAGTGT 60.054 47.826 0.00 0.00 0.00 3.55
224 226 4.163458 GGATGGGGATAAGTGTTCAGTGTA 59.837 45.833 0.00 0.00 0.00 2.90
227 229 4.020573 TGGGGATAAGTGTTCAGTGTAGTG 60.021 45.833 0.00 0.00 0.00 2.74
228 230 4.020485 GGGGATAAGTGTTCAGTGTAGTGT 60.020 45.833 0.00 0.00 0.00 3.55
229 231 5.169295 GGGATAAGTGTTCAGTGTAGTGTC 58.831 45.833 0.00 0.00 0.00 3.67
244 246 5.690857 GTGTAGTGTCAAAAGTAGAGTGACC 59.309 44.000 0.00 0.00 40.79 4.02
246 248 5.615925 AGTGTCAAAAGTAGAGTGACCTT 57.384 39.130 0.00 0.00 40.79 3.50
247 249 5.990668 AGTGTCAAAAGTAGAGTGACCTTT 58.009 37.500 0.00 0.00 40.79 3.11
248 250 6.415573 AGTGTCAAAAGTAGAGTGACCTTTT 58.584 36.000 0.00 0.00 40.79 2.27
249 251 6.884836 AGTGTCAAAAGTAGAGTGACCTTTTT 59.115 34.615 0.00 0.00 40.79 1.94
323 325 5.203060 AGTAGAGTGACTTGGTTCTCAAC 57.797 43.478 0.00 0.00 0.00 3.18
346 352 1.869132 GCTCCGTTCGTAACCAAGTTT 59.131 47.619 0.00 0.00 0.00 2.66
384 390 2.661718 AGCACTTCCCCGAAAAGAAAA 58.338 42.857 0.00 0.00 0.00 2.29
429 2877 1.908793 AGGACCGGATATGCCCTCG 60.909 63.158 9.46 0.00 0.00 4.63
430 2878 2.207924 GGACCGGATATGCCCTCGT 61.208 63.158 9.46 0.00 0.00 4.18
431 2879 0.896940 GGACCGGATATGCCCTCGTA 60.897 60.000 9.46 0.00 0.00 3.43
432 2880 0.243095 GACCGGATATGCCCTCGTAC 59.757 60.000 9.46 0.00 0.00 3.67
433 2881 0.178970 ACCGGATATGCCCTCGTACT 60.179 55.000 9.46 0.00 0.00 2.73
480 3165 2.322081 GCAAACGTTCGCTAGCCCA 61.322 57.895 9.66 0.00 0.00 5.36
484 3169 1.084289 AACGTTCGCTAGCCCATTTC 58.916 50.000 9.66 0.00 0.00 2.17
485 3170 0.249398 ACGTTCGCTAGCCCATTTCT 59.751 50.000 9.66 0.00 0.00 2.52
490 3175 2.365582 TCGCTAGCCCATTTCTTTTCC 58.634 47.619 9.66 0.00 0.00 3.13
492 3177 2.092323 GCTAGCCCATTTCTTTTCCGT 58.908 47.619 2.29 0.00 0.00 4.69
493 3178 2.159379 GCTAGCCCATTTCTTTTCCGTG 60.159 50.000 2.29 0.00 0.00 4.94
494 3179 1.256812 AGCCCATTTCTTTTCCGTGG 58.743 50.000 0.00 0.00 0.00 4.94
495 3180 0.389817 GCCCATTTCTTTTCCGTGGC 60.390 55.000 0.00 0.00 0.00 5.01
496 3181 0.965439 CCCATTTCTTTTCCGTGGCA 59.035 50.000 0.00 0.00 0.00 4.92
497 3182 1.336795 CCCATTTCTTTTCCGTGGCAC 60.337 52.381 7.79 7.79 0.00 5.01
498 3183 1.665735 CCATTTCTTTTCCGTGGCACG 60.666 52.381 31.78 31.78 42.11 5.34
499 3184 0.039527 ATTTCTTTTCCGTGGCACGC 60.040 50.000 33.15 0.00 40.91 5.34
500 3185 1.377366 TTTCTTTTCCGTGGCACGCA 61.377 50.000 33.15 18.68 40.91 5.24
501 3186 1.781025 TTCTTTTCCGTGGCACGCAG 61.781 55.000 33.15 23.23 40.91 5.18
527 3212 0.309302 CACCGACCGTGCAAATGAAA 59.691 50.000 0.00 0.00 35.18 2.69
528 3213 1.025812 ACCGACCGTGCAAATGAAAA 58.974 45.000 0.00 0.00 0.00 2.29
532 3217 2.250188 GACCGTGCAAATGAAAATCCG 58.750 47.619 0.00 0.00 0.00 4.18
543 3228 6.455513 GCAAATGAAAATCCGAATTACAAGGC 60.456 38.462 0.00 0.00 0.00 4.35
574 3260 3.591254 GACCCGACACTGCCTCCAC 62.591 68.421 0.00 0.00 0.00 4.02
575 3261 4.742201 CCCGACACTGCCTCCACG 62.742 72.222 0.00 0.00 0.00 4.94
587 3273 1.303317 CTCCACGAAAACCCAGGGG 60.303 63.158 11.37 6.87 42.03 4.79
588 3274 2.989253 CCACGAAAACCCAGGGGC 60.989 66.667 11.37 0.00 39.32 5.80
590 3276 3.182996 ACGAAAACCCAGGGGCCT 61.183 61.111 11.37 0.00 39.32 5.19
596 3282 2.089116 AAACCCAGGGGCCTAACACC 62.089 60.000 11.37 0.00 39.32 4.16
602 3288 0.558712 AGGGGCCTAACACCAAAACA 59.441 50.000 0.84 0.00 0.00 2.83
650 3336 1.602165 CGAATAATCCCGTCCGTCCAG 60.602 57.143 0.00 0.00 0.00 3.86
656 3342 4.530857 CCGTCCGTCCAGCCATCC 62.531 72.222 0.00 0.00 0.00 3.51
676 3362 2.764128 ATCCCGCCATCGTGACCT 60.764 61.111 0.00 0.00 0.00 3.85
680 3366 2.264480 CGCCATCGTGACCTTCCA 59.736 61.111 0.00 0.00 0.00 3.53
681 3367 1.153369 CGCCATCGTGACCTTCCAT 60.153 57.895 0.00 0.00 0.00 3.41
685 3371 0.541392 CATCGTGACCTTCCATCCCA 59.459 55.000 0.00 0.00 0.00 4.37
792 3478 4.787280 CTCCTCCCCACCCTCGCT 62.787 72.222 0.00 0.00 0.00 4.93
793 3479 4.779733 TCCTCCCCACCCTCGCTC 62.780 72.222 0.00 0.00 0.00 5.03
861 3547 1.955458 AAGATCCCGAGCCTCCTCCT 61.955 60.000 0.00 0.00 34.49 3.69
881 3567 2.265182 CCCGCCTCTCGATCTCTCC 61.265 68.421 0.00 0.00 41.67 3.71
885 3575 0.179004 GCCTCTCGATCTCTCCTCCA 60.179 60.000 0.00 0.00 0.00 3.86
927 3619 1.006571 TGGTCGAGCTCACGGTTTC 60.007 57.895 16.64 0.00 0.00 2.78
928 3620 2.087009 GGTCGAGCTCACGGTTTCG 61.087 63.158 15.40 0.00 43.02 3.46
1023 3716 1.013596 CGCTCGTGAGTCTCTCATCT 58.986 55.000 0.65 0.00 42.73 2.90
1025 3718 1.333619 GCTCGTGAGTCTCTCATCTCC 59.666 57.143 0.65 0.00 42.73 3.71
1026 3719 2.637947 CTCGTGAGTCTCTCATCTCCA 58.362 52.381 0.65 0.00 42.73 3.86
1027 3720 3.213506 CTCGTGAGTCTCTCATCTCCAT 58.786 50.000 0.65 0.00 42.73 3.41
1028 3721 3.210227 TCGTGAGTCTCTCATCTCCATC 58.790 50.000 0.65 0.00 42.73 3.51
1029 3722 3.118075 TCGTGAGTCTCTCATCTCCATCT 60.118 47.826 0.65 0.00 42.73 2.90
1030 3723 3.250762 CGTGAGTCTCTCATCTCCATCTC 59.749 52.174 0.65 0.00 42.73 2.75
1031 3724 3.569701 GTGAGTCTCTCATCTCCATCTCC 59.430 52.174 0.65 0.00 42.73 3.71
1036 3729 1.862242 TCTCATCTCCATCTCCCCTCA 59.138 52.381 0.00 0.00 0.00 3.86
1059 3752 6.801377 TCATAGATTTCGTTGTTTGATTGTGC 59.199 34.615 0.00 0.00 0.00 4.57
1104 3797 0.940126 GCCAGTAGATGTTGATGCGG 59.060 55.000 0.00 0.00 0.00 5.69
1107 3800 2.352651 CCAGTAGATGTTGATGCGGTTG 59.647 50.000 0.00 0.00 0.00 3.77
1117 3810 1.079503 GATGCGGTTGGAGTTCTGTC 58.920 55.000 0.00 0.00 0.00 3.51
1143 3836 3.929948 CCGATTTGGAGAGCGCGC 61.930 66.667 26.66 26.66 42.00 6.86
1169 3862 0.674581 CGGCTGGCTTGTTCTGATGA 60.675 55.000 0.00 0.00 0.00 2.92
1179 3872 1.672363 TGTTCTGATGATTGATGCGGC 59.328 47.619 0.00 0.00 0.00 6.53
1181 3874 1.875009 TCTGATGATTGATGCGGCTC 58.125 50.000 0.00 0.00 0.00 4.70
1198 3893 0.249238 CTCGGTAGGTCTCTGCATGC 60.249 60.000 11.82 11.82 0.00 4.06
1232 3927 1.227176 GATGTAGTTCGCGGGTCCC 60.227 63.158 6.13 0.00 0.00 4.46
1281 3977 6.602410 TCCAATTATTGATTTGGTTGCTGA 57.398 33.333 6.50 0.00 0.00 4.26
1287 3983 0.874390 GATTTGGTTGCTGACGCTGA 59.126 50.000 0.00 0.00 36.97 4.26
1342 4038 3.000041 TCATGGTGTCGTAGATTTGTGC 59.000 45.455 0.00 0.00 40.67 4.57
1349 4045 3.551485 TGTCGTAGATTTGTGCATGATCG 59.449 43.478 0.00 0.00 40.67 3.69
1406 4104 9.567776 TCAGTTATTCCTAAATTTGTGAACTCA 57.432 29.630 0.00 0.00 0.00 3.41
1414 4112 8.908903 TCCTAAATTTGTGAACTCAAGCTTTTA 58.091 29.630 0.00 0.00 0.00 1.52
1427 4125 4.212636 TCAAGCTTTTAAGTCGCTGTAACC 59.787 41.667 0.00 0.00 33.64 2.85
1429 4127 4.386711 AGCTTTTAAGTCGCTGTAACCTT 58.613 39.130 0.00 0.00 31.82 3.50
1439 4137 2.222729 CGCTGTAACCTTTATGCGACAC 60.223 50.000 0.00 0.00 45.15 3.67
1452 4150 0.517316 GCGACACAGTTGGAATGGAC 59.483 55.000 0.00 0.00 0.00 4.02
1459 4157 1.352352 CAGTTGGAATGGACTCAGGGT 59.648 52.381 0.00 0.00 0.00 4.34
1492 4190 2.898729 ACCCGAGATTAGTGCATCTG 57.101 50.000 0.00 0.00 33.36 2.90
1494 4192 2.501723 ACCCGAGATTAGTGCATCTGTT 59.498 45.455 0.00 0.00 33.36 3.16
1499 4197 4.505922 CGAGATTAGTGCATCTGTTCTTCC 59.494 45.833 0.00 0.00 33.36 3.46
1508 4206 5.121454 GTGCATCTGTTCTTCCTTCACTTAG 59.879 44.000 0.00 0.00 0.00 2.18
1529 4230 3.197766 AGCTTAGCTTGCTGGTGTACATA 59.802 43.478 12.24 0.00 39.56 2.29
1530 4231 3.309954 GCTTAGCTTGCTGGTGTACATAC 59.690 47.826 0.00 0.00 0.00 2.39
1538 4239 6.597262 TTGCTGGTGTACATACGATTAATG 57.403 37.500 0.00 0.00 0.00 1.90
1553 4255 4.487948 GATTAATGTGCTTCTGCTTGCAA 58.512 39.130 0.00 0.00 41.10 4.08
1600 4309 3.921119 TGTCCATTGTTCTGAACATGC 57.079 42.857 22.60 11.97 41.79 4.06
1609 4318 1.527034 TCTGAACATGCCTTGTGCTC 58.473 50.000 0.00 0.00 38.99 4.26
1618 4327 1.630369 TGCCTTGTGCTCTATCCTTGT 59.370 47.619 0.00 0.00 42.00 3.16
1619 4328 2.837591 TGCCTTGTGCTCTATCCTTGTA 59.162 45.455 0.00 0.00 42.00 2.41
1620 4329 3.263170 TGCCTTGTGCTCTATCCTTGTAA 59.737 43.478 0.00 0.00 42.00 2.41
1713 4422 3.152341 CAAGGTTGAGCTGACCAAGAAT 58.848 45.455 16.09 0.00 39.71 2.40
1802 4511 7.702772 ACACGAATCAGACTCACATATTAGTTC 59.297 37.037 0.00 0.00 0.00 3.01
1803 4512 7.702348 CACGAATCAGACTCACATATTAGTTCA 59.298 37.037 0.00 0.00 0.00 3.18
1804 4513 8.251026 ACGAATCAGACTCACATATTAGTTCAA 58.749 33.333 0.00 0.00 0.00 2.69
1805 4514 9.254133 CGAATCAGACTCACATATTAGTTCAAT 57.746 33.333 0.00 0.00 0.00 2.57
1845 4554 6.479001 TCAGCGAGCAAGGAACTAATAATTAC 59.521 38.462 0.00 0.00 38.49 1.89
1846 4555 6.480320 CAGCGAGCAAGGAACTAATAATTACT 59.520 38.462 0.00 0.00 38.49 2.24
1963 4680 1.808945 GTCTTGCTGATTCCACACTGG 59.191 52.381 0.00 0.00 39.43 4.00
1974 4691 2.422597 TCCACACTGGCTAAATTGACG 58.577 47.619 0.00 0.00 37.47 4.35
2002 4719 4.918810 TTCTTTTCTTCCTTCAGTTGCC 57.081 40.909 0.00 0.00 0.00 4.52
2019 4736 1.672356 CCCGCTCAAAGGGTGACAG 60.672 63.158 0.00 0.00 43.89 3.51
2250 4970 7.148641 CAGGTAAGTGTACACATCAGATATCC 58.851 42.308 27.06 14.45 31.21 2.59
2270 4992 4.556233 TCCGAATTATCTATGTTCAGGCG 58.444 43.478 0.00 0.00 0.00 5.52
2343 5066 1.750193 TTGCTGGATTAAAGAGGGCG 58.250 50.000 0.00 0.00 0.00 6.13
2421 5144 5.121811 GTCACTCTGGCTGATATTGTCATT 58.878 41.667 0.00 0.00 35.97 2.57
2873 5633 6.057533 CCCTTGCAAGTTCTATATGTGATGA 58.942 40.000 24.35 0.00 0.00 2.92
3039 5806 7.819900 GTCCATTCTTTAGTGTGTCTACTTGAT 59.180 37.037 0.00 0.00 32.19 2.57
3065 5832 3.244033 ACTACTTCTGAGTCATGCAGC 57.756 47.619 0.00 0.00 37.33 5.25
3083 5850 0.108945 GCTTGCCTTGCCTTGATCAC 60.109 55.000 0.00 0.00 0.00 3.06
3161 5928 6.714810 AGTTGTGGCATTCTGTTCTTGTTATA 59.285 34.615 0.00 0.00 0.00 0.98
3262 6029 0.828762 TGCATCAGGGCAGCAGTTTT 60.829 50.000 0.00 0.00 39.25 2.43
3316 6083 6.618287 TCTGTCCTTGTTCATTTGTAACTG 57.382 37.500 0.00 0.00 0.00 3.16
3445 6212 2.094854 GGAAGAGAACACCGTGTCGTAT 60.095 50.000 4.23 0.00 0.00 3.06
3775 6542 2.499205 GGATCGTGATGGCGGTGA 59.501 61.111 0.00 0.00 0.00 4.02
3777 6544 1.153647 GATCGTGATGGCGGTGACA 60.154 57.895 0.00 0.00 0.00 3.58
3797 6564 7.036829 GTGACAAAAGAACCTATCTAGGACTC 58.963 42.308 10.25 6.22 46.63 3.36
3820 6588 5.123186 TCAAATTCAGTGTCGAAACAGTTGT 59.877 36.000 8.78 0.00 36.92 3.32
3821 6589 4.795970 ATTCAGTGTCGAAACAGTTGTC 57.204 40.909 8.78 0.00 36.92 3.18
3873 6643 3.181434 TGGCTATTTGACCTGGTGAACTT 60.181 43.478 2.82 0.00 0.00 2.66
3879 6649 6.976934 ATTTGACCTGGTGAACTTGTTAAT 57.023 33.333 2.82 0.00 0.00 1.40
3909 6679 5.646360 TGCTATGCTAAGAGTTTTTGGGTAC 59.354 40.000 0.00 0.00 0.00 3.34
3925 6695 1.338200 GGTACCTGGTCTTGCAGTCTG 60.338 57.143 0.63 0.00 0.00 3.51
3926 6696 1.344763 GTACCTGGTCTTGCAGTCTGT 59.655 52.381 0.63 0.00 0.00 3.41
3928 6698 1.233019 CCTGGTCTTGCAGTCTGTTG 58.767 55.000 0.93 0.00 0.00 3.33
3933 6704 3.133901 TGGTCTTGCAGTCTGTTGTTCTA 59.866 43.478 0.93 0.00 0.00 2.10
3935 6706 4.757149 GGTCTTGCAGTCTGTTGTTCTATT 59.243 41.667 0.93 0.00 0.00 1.73
3941 6712 6.999950 TGCAGTCTGTTGTTCTATTAGGTTA 58.000 36.000 0.93 0.00 0.00 2.85
3944 6715 8.391106 GCAGTCTGTTGTTCTATTAGGTTAATG 58.609 37.037 0.93 0.00 0.00 1.90
3956 6727 5.652994 TTAGGTTAATGCATTTGTGTCCC 57.347 39.130 18.75 8.63 0.00 4.46
3959 6730 3.197549 GGTTAATGCATTTGTGTCCCCAT 59.802 43.478 18.75 0.00 0.00 4.00
3962 6733 4.675976 AATGCATTTGTGTCCCCATATG 57.324 40.909 5.99 0.00 0.00 1.78
3967 6738 1.294041 TTGTGTCCCCATATGGAGCA 58.706 50.000 24.00 14.82 37.39 4.26
3968 6739 1.521764 TGTGTCCCCATATGGAGCAT 58.478 50.000 24.00 0.00 37.39 3.79
3975 6753 4.777896 GTCCCCATATGGAGCATCTACTTA 59.222 45.833 24.00 0.00 37.39 2.24
3976 6754 5.248477 GTCCCCATATGGAGCATCTACTTAA 59.752 44.000 24.00 0.00 37.39 1.85
3982 6760 7.601886 CCATATGGAGCATCTACTTAAGTGAAG 59.398 40.741 17.49 8.65 38.14 3.02
3986 6764 4.177026 AGCATCTACTTAAGTGAAGCGTG 58.823 43.478 18.56 11.01 38.92 5.34
3999 6780 2.419673 TGAAGCGTGATATTGCTGTTGG 59.580 45.455 0.00 0.00 41.46 3.77
4028 6809 4.498009 GCTAACTGTTTCTGAGCAAAGCAA 60.498 41.667 7.88 0.00 33.26 3.91
4029 6810 3.705043 ACTGTTTCTGAGCAAAGCAAG 57.295 42.857 0.00 0.00 0.00 4.01
4030 6811 2.360165 ACTGTTTCTGAGCAAAGCAAGG 59.640 45.455 0.00 0.00 0.00 3.61
4031 6812 1.067516 TGTTTCTGAGCAAAGCAAGGC 59.932 47.619 0.00 0.00 0.00 4.35
4032 6813 1.067516 GTTTCTGAGCAAAGCAAGGCA 59.932 47.619 0.00 0.00 0.00 4.75
4049 6830 2.240493 GCATGTATGGCCTTCGTAGT 57.760 50.000 3.32 0.00 0.00 2.73
4051 6832 2.483013 GCATGTATGGCCTTCGTAGTGA 60.483 50.000 3.32 0.00 0.00 3.41
4052 6833 3.803715 GCATGTATGGCCTTCGTAGTGAT 60.804 47.826 3.32 0.00 0.00 3.06
4054 6835 4.579454 TGTATGGCCTTCGTAGTGATAC 57.421 45.455 3.32 0.39 0.00 2.24
4071 6852 1.429930 TACACTCAGGCCTTCCACAA 58.570 50.000 0.00 0.00 33.74 3.33
4152 6933 2.591571 TTCAGCCATCGATCTCACAG 57.408 50.000 0.00 0.00 0.00 3.66
4155 6936 2.593134 GCCATCGATCTCACAGCGC 61.593 63.158 0.00 0.00 0.00 5.92
4179 6960 2.416027 GGCTTCGGCAGGAAAAAGATTC 60.416 50.000 0.00 0.00 43.96 2.52
4184 6965 2.529632 GGCAGGAAAAAGATTCTGGGT 58.470 47.619 0.00 0.00 0.00 4.51
4250 7082 1.027357 CTGAAGGAATTGGGCATCGG 58.973 55.000 0.00 0.00 0.00 4.18
4251 7083 0.331278 TGAAGGAATTGGGCATCGGT 59.669 50.000 0.00 0.00 0.00 4.69
4252 7084 0.740737 GAAGGAATTGGGCATCGGTG 59.259 55.000 0.00 0.00 0.00 4.94
4284 7116 4.159321 TGCTCCGATGCCATGAAAATTTTA 59.841 37.500 2.75 0.00 0.00 1.52
4325 7157 2.029073 CAACGTGAGAGCACCGGT 59.971 61.111 0.00 0.00 42.09 5.28
4342 7174 3.270962 CGGTTATCGGAGCTAGAAGTC 57.729 52.381 0.00 0.00 34.75 3.01
4348 7180 7.208080 GGTTATCGGAGCTAGAAGTCAATTTA 58.792 38.462 0.00 0.00 0.00 1.40
4355 7187 5.810095 AGCTAGAAGTCAATTTAGCACCTT 58.190 37.500 7.20 0.00 40.66 3.50
4381 7213 9.662947 TTTTTAGCCTACATAGTAAAAGGTCTC 57.337 33.333 0.00 0.00 0.00 3.36
4384 7216 5.958987 AGCCTACATAGTAAAAGGTCTCAGT 59.041 40.000 0.00 0.00 0.00 3.41
4386 7218 6.127423 GCCTACATAGTAAAAGGTCTCAGTGA 60.127 42.308 0.00 0.00 0.00 3.41
4388 7220 8.478877 CCTACATAGTAAAAGGTCTCAGTGATT 58.521 37.037 0.00 0.00 0.00 2.57
4389 7221 9.877178 CTACATAGTAAAAGGTCTCAGTGATTT 57.123 33.333 0.00 0.00 0.00 2.17
4393 7225 7.617041 AGTAAAAGGTCTCAGTGATTTATGC 57.383 36.000 0.00 0.00 0.00 3.14
4394 7226 5.904362 AAAAGGTCTCAGTGATTTATGCC 57.096 39.130 0.00 0.00 0.00 4.40
4396 7228 4.785346 AGGTCTCAGTGATTTATGCCAT 57.215 40.909 0.00 0.00 0.00 4.40
4397 7229 4.458397 AGGTCTCAGTGATTTATGCCATG 58.542 43.478 0.00 0.00 0.00 3.66
4398 7230 4.164796 AGGTCTCAGTGATTTATGCCATGA 59.835 41.667 0.00 0.00 0.00 3.07
4400 7232 5.357878 GGTCTCAGTGATTTATGCCATGAAA 59.642 40.000 0.00 0.00 0.00 2.69
4401 7233 6.040166 GGTCTCAGTGATTTATGCCATGAAAT 59.960 38.462 0.00 0.00 0.00 2.17
4402 7234 7.137426 GTCTCAGTGATTTATGCCATGAAATC 58.863 38.462 9.54 9.54 40.80 2.17
4403 7235 7.013083 GTCTCAGTGATTTATGCCATGAAATCT 59.987 37.037 14.95 0.00 40.94 2.40
4404 7236 7.228108 TCTCAGTGATTTATGCCATGAAATCTC 59.772 37.037 14.95 12.33 40.94 2.75
4406 7238 7.228108 TCAGTGATTTATGCCATGAAATCTCTC 59.772 37.037 14.45 8.34 40.92 3.20
4407 7239 6.204301 AGTGATTTATGCCATGAAATCTCTCG 59.796 38.462 14.95 0.00 39.74 4.04
4408 7240 4.818534 TTTATGCCATGAAATCTCTCGC 57.181 40.909 0.00 0.00 0.00 5.03
4409 7241 1.602311 ATGCCATGAAATCTCTCGCC 58.398 50.000 0.00 0.00 0.00 5.54
4411 7243 0.942962 GCCATGAAATCTCTCGCCAG 59.057 55.000 0.00 0.00 0.00 4.85
4412 7244 0.942962 CCATGAAATCTCTCGCCAGC 59.057 55.000 0.00 0.00 0.00 4.85
4414 7246 0.531532 ATGAAATCTCTCGCCAGCCG 60.532 55.000 0.00 0.00 38.61 5.52
4415 7247 1.153549 GAAATCTCTCGCCAGCCGT 60.154 57.895 0.00 0.00 38.35 5.68
4416 7248 1.424493 GAAATCTCTCGCCAGCCGTG 61.424 60.000 0.00 0.00 38.35 4.94
4417 7249 1.888436 AAATCTCTCGCCAGCCGTGA 61.888 55.000 0.00 0.00 37.79 4.35
4418 7250 1.680522 AATCTCTCGCCAGCCGTGAT 61.681 55.000 0.00 0.00 38.58 3.06
4419 7251 1.680522 ATCTCTCGCCAGCCGTGATT 61.681 55.000 0.00 0.00 38.58 2.57
4421 7253 1.424493 CTCTCGCCAGCCGTGATTTC 61.424 60.000 0.00 0.00 38.58 2.17
4423 7255 1.078497 TCGCCAGCCGTGATTTCAT 60.078 52.632 0.00 0.00 38.35 2.57
4424 7256 1.063006 CGCCAGCCGTGATTTCATG 59.937 57.895 0.00 0.00 0.00 3.07
4425 7257 1.368345 CGCCAGCCGTGATTTCATGA 61.368 55.000 0.00 0.00 34.90 3.07
4426 7258 0.379669 GCCAGCCGTGATTTCATGAG 59.620 55.000 0.00 0.00 34.90 2.90
4427 7259 2.013563 GCCAGCCGTGATTTCATGAGA 61.014 52.381 0.00 0.00 34.90 3.27
4429 7261 2.947652 CCAGCCGTGATTTCATGAGATT 59.052 45.455 0.00 0.00 34.90 2.40
4430 7262 3.379372 CCAGCCGTGATTTCATGAGATTT 59.621 43.478 0.00 0.00 34.90 2.17
4431 7263 4.497006 CCAGCCGTGATTTCATGAGATTTC 60.497 45.833 0.00 0.00 34.90 2.17
4433 7265 4.095483 AGCCGTGATTTCATGAGATTTCAC 59.905 41.667 9.04 9.04 35.83 3.18
4437 7269 6.348786 CCGTGATTTCATGAGATTTCACAAGT 60.349 38.462 16.08 0.00 36.54 3.16
4438 7270 6.740002 CGTGATTTCATGAGATTTCACAAGTC 59.260 38.462 16.08 0.00 36.54 3.01
4439 7271 7.571798 CGTGATTTCATGAGATTTCACAAGTCA 60.572 37.037 16.08 1.50 36.54 3.41
4442 7274 9.467258 GATTTCATGAGATTTCACAAGTCAAAA 57.533 29.630 0.00 0.00 35.83 2.44
4443 7275 8.861033 TTTCATGAGATTTCACAAGTCAAAAG 57.139 30.769 0.00 0.00 35.83 2.27
4445 7277 7.999679 TCATGAGATTTCACAAGTCAAAAGTT 58.000 30.769 0.00 0.00 35.83 2.66
4447 7279 8.537223 CATGAGATTTCACAAGTCAAAAGTTTG 58.463 33.333 0.00 0.00 35.83 2.93
4448 7280 7.035004 TGAGATTTCACAAGTCAAAAGTTTGG 58.965 34.615 4.04 0.00 38.66 3.28
4449 7281 6.340522 AGATTTCACAAGTCAAAAGTTTGGG 58.659 36.000 4.04 0.00 38.66 4.12
4450 7282 3.518634 TCACAAGTCAAAAGTTTGGGC 57.481 42.857 4.04 0.00 38.66 5.36
4451 7283 2.828520 TCACAAGTCAAAAGTTTGGGCA 59.171 40.909 0.00 0.00 38.66 5.36
4452 7284 3.259374 TCACAAGTCAAAAGTTTGGGCAA 59.741 39.130 0.00 0.00 38.66 4.52
4453 7285 3.999663 CACAAGTCAAAAGTTTGGGCAAA 59.000 39.130 0.00 0.00 38.66 3.68
4454 7286 4.093261 CACAAGTCAAAAGTTTGGGCAAAG 59.907 41.667 0.00 0.00 38.66 2.77
4455 7287 4.020662 ACAAGTCAAAAGTTTGGGCAAAGA 60.021 37.500 0.00 0.00 38.66 2.52
4456 7288 4.817318 AGTCAAAAGTTTGGGCAAAGAA 57.183 36.364 0.00 0.00 38.66 2.52
4457 7289 5.357742 AGTCAAAAGTTTGGGCAAAGAAT 57.642 34.783 0.00 0.00 38.66 2.40
4458 7290 5.744171 AGTCAAAAGTTTGGGCAAAGAATT 58.256 33.333 0.00 0.00 38.66 2.17
4459 7291 5.817296 AGTCAAAAGTTTGGGCAAAGAATTC 59.183 36.000 0.00 0.00 38.66 2.17
4460 7292 5.584251 GTCAAAAGTTTGGGCAAAGAATTCA 59.416 36.000 8.44 0.00 38.66 2.57
4461 7293 6.260714 GTCAAAAGTTTGGGCAAAGAATTCAT 59.739 34.615 8.44 0.00 38.66 2.57
4462 7294 7.440856 GTCAAAAGTTTGGGCAAAGAATTCATA 59.559 33.333 8.44 0.00 38.66 2.15
4465 7297 5.793817 AGTTTGGGCAAAGAATTCATAACC 58.206 37.500 8.44 3.76 0.00 2.85
4466 7298 4.448537 TTGGGCAAAGAATTCATAACCG 57.551 40.909 8.44 0.00 0.00 4.44
4467 7299 2.165437 TGGGCAAAGAATTCATAACCGC 59.835 45.455 8.44 1.36 0.00 5.68
4468 7300 2.481276 GGGCAAAGAATTCATAACCGCC 60.481 50.000 8.44 9.97 36.26 6.13
4470 7302 2.096819 GCAAAGAATTCATAACCGCCGA 59.903 45.455 8.44 0.00 0.00 5.54
4471 7303 3.680789 CAAAGAATTCATAACCGCCGAC 58.319 45.455 8.44 0.00 0.00 4.79
4472 7304 2.981859 AGAATTCATAACCGCCGACT 57.018 45.000 8.44 0.00 0.00 4.18
4475 7307 5.717078 AGAATTCATAACCGCCGACTATA 57.283 39.130 8.44 0.00 0.00 1.31
4476 7308 6.282199 AGAATTCATAACCGCCGACTATAT 57.718 37.500 8.44 0.00 0.00 0.86
4477 7309 7.400599 AGAATTCATAACCGCCGACTATATA 57.599 36.000 8.44 0.00 0.00 0.86
4479 7311 5.571784 TTCATAACCGCCGACTATATAGG 57.428 43.478 14.25 0.00 0.00 2.57
4480 7312 4.592942 TCATAACCGCCGACTATATAGGT 58.407 43.478 14.25 0.00 0.00 3.08
4481 7313 5.744171 TCATAACCGCCGACTATATAGGTA 58.256 41.667 14.25 0.00 0.00 3.08
4482 7314 6.179756 TCATAACCGCCGACTATATAGGTAA 58.820 40.000 14.25 0.00 0.00 2.85
4485 7317 5.990120 ACCGCCGACTATATAGGTAAAAT 57.010 39.130 14.25 0.00 0.00 1.82
4486 7318 5.958955 ACCGCCGACTATATAGGTAAAATC 58.041 41.667 14.25 0.83 0.00 2.17
4488 7320 5.126707 CCGCCGACTATATAGGTAAAATCCT 59.873 44.000 14.25 0.00 41.20 3.24
4489 7321 6.350780 CCGCCGACTATATAGGTAAAATCCTT 60.351 42.308 14.25 0.00 38.86 3.36
4490 7322 7.148018 CCGCCGACTATATAGGTAAAATCCTTA 60.148 40.741 14.25 0.00 38.86 2.69
4491 7323 7.914346 CGCCGACTATATAGGTAAAATCCTTAG 59.086 40.741 14.25 0.00 38.86 2.18
4492 7324 8.747471 GCCGACTATATAGGTAAAATCCTTAGT 58.253 37.037 14.25 0.00 38.86 2.24
4499 7331 5.836024 AGGTAAAATCCTTAGTGTCCACA 57.164 39.130 0.00 0.00 33.52 4.17
4500 7332 5.557866 AGGTAAAATCCTTAGTGTCCACAC 58.442 41.667 1.28 1.28 39.80 3.82
4501 7333 5.514310 AGGTAAAATCCTTAGTGTCCACACC 60.514 44.000 6.22 0.00 40.12 4.16
4502 7334 7.889263 AGGTAAAATCCTTAGTGTCCACACCA 61.889 42.308 6.22 0.00 40.12 4.17
4505 7337 2.684943 TCCTTAGTGTCCACACCAAGA 58.315 47.619 16.68 3.30 44.58 3.02
4506 7338 3.042682 TCCTTAGTGTCCACACCAAGAA 58.957 45.455 16.68 0.00 44.58 2.52
4507 7339 3.456644 TCCTTAGTGTCCACACCAAGAAA 59.543 43.478 16.68 4.86 44.58 2.52
4509 7341 4.451900 CTTAGTGTCCACACCAAGAAACT 58.548 43.478 11.32 0.00 44.58 2.66
4511 7343 5.465724 CTTAGTGTCCACACCAAGAAACTAC 59.534 44.000 11.32 0.00 44.58 2.73
4512 7344 2.876550 GTGTCCACACCAAGAAACTACC 59.123 50.000 0.00 0.00 40.85 3.18
4513 7345 2.506231 TGTCCACACCAAGAAACTACCA 59.494 45.455 0.00 0.00 0.00 3.25
4514 7346 2.876550 GTCCACACCAAGAAACTACCAC 59.123 50.000 0.00 0.00 0.00 4.16
4516 7348 3.137544 TCCACACCAAGAAACTACCACAT 59.862 43.478 0.00 0.00 0.00 3.21
4517 7349 3.502211 CCACACCAAGAAACTACCACATC 59.498 47.826 0.00 0.00 0.00 3.06
4520 7352 4.821805 ACACCAAGAAACTACCACATCAAG 59.178 41.667 0.00 0.00 0.00 3.02
4522 7354 5.530915 CACCAAGAAACTACCACATCAAGAA 59.469 40.000 0.00 0.00 0.00 2.52
4523 7355 5.531287 ACCAAGAAACTACCACATCAAGAAC 59.469 40.000 0.00 0.00 0.00 3.01
4524 7356 5.765182 CCAAGAAACTACCACATCAAGAACT 59.235 40.000 0.00 0.00 0.00 3.01
4527 7359 6.831976 AGAAACTACCACATCAAGAACTTCT 58.168 36.000 0.00 0.00 0.00 2.85
4528 7360 6.708054 AGAAACTACCACATCAAGAACTTCTG 59.292 38.462 0.00 0.00 0.00 3.02
4529 7361 5.552870 ACTACCACATCAAGAACTTCTGT 57.447 39.130 0.00 0.00 0.00 3.41
4530 7362 5.930135 ACTACCACATCAAGAACTTCTGTT 58.070 37.500 0.00 0.00 39.42 3.16
4531 7363 5.760253 ACTACCACATCAAGAACTTCTGTTG 59.240 40.000 0.00 0.00 36.39 3.33
4533 7365 4.949856 ACCACATCAAGAACTTCTGTTGTT 59.050 37.500 0.00 0.00 39.76 2.83
4534 7366 5.418840 ACCACATCAAGAACTTCTGTTGTTT 59.581 36.000 0.00 0.00 37.53 2.83
4535 7367 5.745294 CCACATCAAGAACTTCTGTTGTTTG 59.255 40.000 0.00 0.00 37.53 2.93
4539 7371 6.135290 TCAAGAACTTCTGTTGTTTGGATG 57.865 37.500 0.00 0.00 37.53 3.51
4540 7372 5.652014 TCAAGAACTTCTGTTGTTTGGATGT 59.348 36.000 0.00 0.00 37.53 3.06
4541 7373 5.505173 AGAACTTCTGTTGTTTGGATGTG 57.495 39.130 0.00 0.00 36.39 3.21
4542 7374 5.192927 AGAACTTCTGTTGTTTGGATGTGA 58.807 37.500 0.00 0.00 36.39 3.58
4543 7375 5.297776 AGAACTTCTGTTGTTTGGATGTGAG 59.702 40.000 0.00 0.00 36.39 3.51
4544 7376 3.885297 ACTTCTGTTGTTTGGATGTGAGG 59.115 43.478 0.00 0.00 0.00 3.86
4545 7377 3.576078 TCTGTTGTTTGGATGTGAGGT 57.424 42.857 0.00 0.00 0.00 3.85
4546 7378 3.897239 TCTGTTGTTTGGATGTGAGGTT 58.103 40.909 0.00 0.00 0.00 3.50
4548 7380 3.885297 CTGTTGTTTGGATGTGAGGTTCT 59.115 43.478 0.00 0.00 0.00 3.01
4549 7381 3.631686 TGTTGTTTGGATGTGAGGTTCTG 59.368 43.478 0.00 0.00 0.00 3.02
4550 7382 3.576078 TGTTTGGATGTGAGGTTCTGT 57.424 42.857 0.00 0.00 0.00 3.41
4551 7383 3.476552 TGTTTGGATGTGAGGTTCTGTC 58.523 45.455 0.00 0.00 0.00 3.51
4553 7385 4.137543 GTTTGGATGTGAGGTTCTGTCTT 58.862 43.478 0.00 0.00 0.00 3.01
4555 7387 2.972021 TGGATGTGAGGTTCTGTCTTCA 59.028 45.455 0.00 0.00 0.00 3.02
4556 7388 3.584406 TGGATGTGAGGTTCTGTCTTCAT 59.416 43.478 0.00 0.00 0.00 2.57
4557 7389 4.042062 TGGATGTGAGGTTCTGTCTTCATT 59.958 41.667 0.00 0.00 0.00 2.57
4558 7390 5.006386 GGATGTGAGGTTCTGTCTTCATTT 58.994 41.667 0.00 0.00 0.00 2.32
4559 7391 5.474876 GGATGTGAGGTTCTGTCTTCATTTT 59.525 40.000 0.00 0.00 0.00 1.82
4560 7392 6.015940 GGATGTGAGGTTCTGTCTTCATTTTT 60.016 38.462 0.00 0.00 0.00 1.94
4561 7393 6.377327 TGTGAGGTTCTGTCTTCATTTTTC 57.623 37.500 0.00 0.00 0.00 2.29
4562 7394 6.122277 TGTGAGGTTCTGTCTTCATTTTTCT 58.878 36.000 0.00 0.00 0.00 2.52
4563 7395 6.260936 TGTGAGGTTCTGTCTTCATTTTTCTC 59.739 38.462 0.00 0.00 0.00 2.87
4564 7396 5.765182 TGAGGTTCTGTCTTCATTTTTCTCC 59.235 40.000 0.00 0.00 0.00 3.71
4567 7399 5.106908 GGTTCTGTCTTCATTTTTCTCCTCG 60.107 44.000 0.00 0.00 0.00 4.63
4568 7400 5.215252 TCTGTCTTCATTTTTCTCCTCGT 57.785 39.130 0.00 0.00 0.00 4.18
4569 7401 5.230942 TCTGTCTTCATTTTTCTCCTCGTC 58.769 41.667 0.00 0.00 0.00 4.20
4570 7402 4.956085 TGTCTTCATTTTTCTCCTCGTCA 58.044 39.130 0.00 0.00 0.00 4.35
4571 7403 4.750098 TGTCTTCATTTTTCTCCTCGTCAC 59.250 41.667 0.00 0.00 0.00 3.67
4572 7404 4.991687 GTCTTCATTTTTCTCCTCGTCACT 59.008 41.667 0.00 0.00 0.00 3.41
4573 7405 5.119434 GTCTTCATTTTTCTCCTCGTCACTC 59.881 44.000 0.00 0.00 0.00 3.51
4574 7406 3.575630 TCATTTTTCTCCTCGTCACTCG 58.424 45.455 0.00 0.00 41.41 4.18
4575 7407 3.005472 TCATTTTTCTCCTCGTCACTCGT 59.995 43.478 0.00 0.00 40.80 4.18
4576 7408 3.447918 TTTTTCTCCTCGTCACTCGTT 57.552 42.857 0.00 0.00 40.80 3.85
4578 7410 1.893544 TTCTCCTCGTCACTCGTTCT 58.106 50.000 0.00 0.00 40.80 3.01
4579 7411 2.756840 TCTCCTCGTCACTCGTTCTA 57.243 50.000 0.00 0.00 40.80 2.10
4581 7413 2.074576 CTCCTCGTCACTCGTTCTACA 58.925 52.381 0.00 0.00 40.80 2.74
4582 7414 2.678836 CTCCTCGTCACTCGTTCTACAT 59.321 50.000 0.00 0.00 40.80 2.29
4583 7415 3.865446 TCCTCGTCACTCGTTCTACATA 58.135 45.455 0.00 0.00 40.80 2.29
4584 7416 4.256110 TCCTCGTCACTCGTTCTACATAA 58.744 43.478 0.00 0.00 40.80 1.90
4585 7417 4.093998 TCCTCGTCACTCGTTCTACATAAC 59.906 45.833 0.00 0.00 40.80 1.89
4587 7419 4.005650 TCGTCACTCGTTCTACATAACCT 58.994 43.478 0.00 0.00 40.80 3.50
4590 7422 6.317140 TCGTCACTCGTTCTACATAACCTAAT 59.683 38.462 0.00 0.00 40.80 1.73
4591 7423 7.495606 TCGTCACTCGTTCTACATAACCTAATA 59.504 37.037 0.00 0.00 40.80 0.98
4592 7424 8.124823 CGTCACTCGTTCTACATAACCTAATAA 58.875 37.037 0.00 0.00 34.52 1.40
4593 7425 9.793252 GTCACTCGTTCTACATAACCTAATAAA 57.207 33.333 0.00 0.00 0.00 1.40
4623 7455 6.951198 ACAATGGTCCATAAACAAATACTCCA 59.049 34.615 4.33 0.00 0.00 3.86
4625 7457 7.823745 ATGGTCCATAAACAAATACTCCATC 57.176 36.000 1.24 0.00 0.00 3.51
4626 7458 6.969043 TGGTCCATAAACAAATACTCCATCT 58.031 36.000 0.00 0.00 0.00 2.90
4628 7460 6.828785 GGTCCATAAACAAATACTCCATCTGT 59.171 38.462 0.00 0.00 0.00 3.41
4630 7462 9.391006 GTCCATAAACAAATACTCCATCTGTAA 57.609 33.333 0.00 0.00 0.00 2.41
4631 7463 9.613428 TCCATAAACAAATACTCCATCTGTAAG 57.387 33.333 0.00 0.00 0.00 2.34
4636 7468 9.959721 AAACAAATACTCCATCTGTAAGTGTAT 57.040 29.630 0.00 0.00 33.76 2.29
4637 7469 9.601217 AACAAATACTCCATCTGTAAGTGTATC 57.399 33.333 0.00 0.00 33.76 2.24
4638 7470 7.921214 ACAAATACTCCATCTGTAAGTGTATCG 59.079 37.037 0.00 0.00 33.76 2.92
4639 7471 7.584122 AATACTCCATCTGTAAGTGTATCGT 57.416 36.000 0.00 0.00 33.76 3.73
4640 7472 5.250235 ACTCCATCTGTAAGTGTATCGTG 57.750 43.478 0.00 0.00 33.76 4.35
4642 7474 5.185249 ACTCCATCTGTAAGTGTATCGTGTT 59.815 40.000 0.00 0.00 33.76 3.32
4645 7477 6.151480 TCCATCTGTAAGTGTATCGTGTTGTA 59.849 38.462 0.00 0.00 33.76 2.41
4646 7478 6.978659 CCATCTGTAAGTGTATCGTGTTGTAT 59.021 38.462 0.00 0.00 33.76 2.29
4648 7480 7.148355 TCTGTAAGTGTATCGTGTTGTATCA 57.852 36.000 0.00 0.00 33.76 2.15
4649 7481 7.768240 TCTGTAAGTGTATCGTGTTGTATCAT 58.232 34.615 0.00 0.00 33.76 2.45
4651 7483 6.976349 TGTAAGTGTATCGTGTTGTATCATCC 59.024 38.462 0.00 0.00 0.00 3.51
4652 7484 4.607955 AGTGTATCGTGTTGTATCATCCG 58.392 43.478 0.00 0.00 0.00 4.18
4655 7487 5.290158 GTGTATCGTGTTGTATCATCCGTTT 59.710 40.000 0.00 0.00 0.00 3.60
4657 7489 2.997303 TCGTGTTGTATCATCCGTTTGG 59.003 45.455 0.00 0.00 0.00 3.28
4696 7528 9.961265 GGGTTTGATTACATTTACTTATTAGGC 57.039 33.333 0.00 0.00 0.00 3.93
4706 7538 8.929487 ACATTTACTTATTAGGCTAGCTTCTCT 58.071 33.333 15.72 5.54 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.126071 CGGTAGTCGCCAGTGGTG 60.126 66.667 17.07 17.07 33.99 4.17
2 3 2.282674 TCGGTAGTCGCCAGTGGT 60.283 61.111 11.74 0.00 39.05 4.16
3 4 2.490217 CTCGGTAGTCGCCAGTGG 59.510 66.667 4.20 4.20 39.05 4.00
5 6 2.214181 CTTGCTCGGTAGTCGCCAGT 62.214 60.000 0.00 0.00 39.05 4.00
6 7 1.517257 CTTGCTCGGTAGTCGCCAG 60.517 63.158 0.00 0.00 39.05 4.85
7 8 1.529152 TTCTTGCTCGGTAGTCGCCA 61.529 55.000 0.00 0.00 39.05 5.69
8 9 0.179108 ATTCTTGCTCGGTAGTCGCC 60.179 55.000 0.00 0.00 39.05 5.54
9 10 0.924090 CATTCTTGCTCGGTAGTCGC 59.076 55.000 0.00 0.00 39.05 5.19
10 11 2.561733 TCATTCTTGCTCGGTAGTCG 57.438 50.000 0.00 0.00 40.90 4.18
11 12 2.605366 GCTTCATTCTTGCTCGGTAGTC 59.395 50.000 0.00 0.00 0.00 2.59
12 13 2.622436 GCTTCATTCTTGCTCGGTAGT 58.378 47.619 0.00 0.00 0.00 2.73
13 14 1.936547 GGCTTCATTCTTGCTCGGTAG 59.063 52.381 0.00 0.00 0.00 3.18
14 15 1.739035 CGGCTTCATTCTTGCTCGGTA 60.739 52.381 0.00 0.00 0.00 4.02
15 16 1.021390 CGGCTTCATTCTTGCTCGGT 61.021 55.000 0.00 0.00 0.00 4.69
16 17 0.740868 TCGGCTTCATTCTTGCTCGG 60.741 55.000 0.00 0.00 0.00 4.63
17 18 1.061711 CTTCGGCTTCATTCTTGCTCG 59.938 52.381 0.00 0.00 0.00 5.03
18 19 2.350522 TCTTCGGCTTCATTCTTGCTC 58.649 47.619 0.00 0.00 0.00 4.26
19 20 2.479566 TCTTCGGCTTCATTCTTGCT 57.520 45.000 0.00 0.00 0.00 3.91
20 21 3.189287 TCTTTCTTCGGCTTCATTCTTGC 59.811 43.478 0.00 0.00 0.00 4.01
21 22 5.149977 GTTCTTTCTTCGGCTTCATTCTTG 58.850 41.667 0.00 0.00 0.00 3.02
22 23 4.216472 GGTTCTTTCTTCGGCTTCATTCTT 59.784 41.667 0.00 0.00 0.00 2.52
23 24 3.753797 GGTTCTTTCTTCGGCTTCATTCT 59.246 43.478 0.00 0.00 0.00 2.40
24 25 3.424962 CGGTTCTTTCTTCGGCTTCATTC 60.425 47.826 0.00 0.00 0.00 2.67
25 26 2.484264 CGGTTCTTTCTTCGGCTTCATT 59.516 45.455 0.00 0.00 0.00 2.57
26 27 2.076863 CGGTTCTTTCTTCGGCTTCAT 58.923 47.619 0.00 0.00 0.00 2.57
27 28 1.508632 CGGTTCTTTCTTCGGCTTCA 58.491 50.000 0.00 0.00 0.00 3.02
28 29 0.796927 CCGGTTCTTTCTTCGGCTTC 59.203 55.000 0.00 0.00 35.95 3.86
29 30 0.108019 ACCGGTTCTTTCTTCGGCTT 59.892 50.000 0.00 0.00 45.65 4.35
30 31 0.971386 TACCGGTTCTTTCTTCGGCT 59.029 50.000 15.04 0.00 45.65 5.52
31 32 1.799544 TTACCGGTTCTTTCTTCGGC 58.200 50.000 15.04 0.00 45.65 5.54
32 33 3.592059 TCATTACCGGTTCTTTCTTCGG 58.408 45.455 15.04 0.00 46.95 4.30
33 34 7.223971 TCAATATCATTACCGGTTCTTTCTTCG 59.776 37.037 15.04 0.00 0.00 3.79
34 35 8.433421 TCAATATCATTACCGGTTCTTTCTTC 57.567 34.615 15.04 0.00 0.00 2.87
35 36 7.012421 GCTCAATATCATTACCGGTTCTTTCTT 59.988 37.037 15.04 0.00 0.00 2.52
36 37 6.483640 GCTCAATATCATTACCGGTTCTTTCT 59.516 38.462 15.04 0.00 0.00 2.52
37 38 6.293462 GGCTCAATATCATTACCGGTTCTTTC 60.293 42.308 15.04 0.00 0.00 2.62
38 39 5.531287 GGCTCAATATCATTACCGGTTCTTT 59.469 40.000 15.04 0.00 0.00 2.52
39 40 5.063880 GGCTCAATATCATTACCGGTTCTT 58.936 41.667 15.04 0.00 0.00 2.52
40 41 4.102524 TGGCTCAATATCATTACCGGTTCT 59.897 41.667 15.04 0.00 0.00 3.01
41 42 4.213482 GTGGCTCAATATCATTACCGGTTC 59.787 45.833 15.04 0.00 0.00 3.62
42 43 4.134563 GTGGCTCAATATCATTACCGGTT 58.865 43.478 15.04 0.00 0.00 4.44
43 44 3.135712 TGTGGCTCAATATCATTACCGGT 59.864 43.478 13.98 13.98 0.00 5.28
44 45 3.738982 TGTGGCTCAATATCATTACCGG 58.261 45.455 0.00 0.00 0.00 5.28
45 46 4.756642 ACATGTGGCTCAATATCATTACCG 59.243 41.667 0.00 0.00 0.00 4.02
46 47 5.764686 TGACATGTGGCTCAATATCATTACC 59.235 40.000 1.15 0.00 0.00 2.85
47 48 6.866010 TGACATGTGGCTCAATATCATTAC 57.134 37.500 1.15 0.00 0.00 1.89
48 49 9.571816 TTAATGACATGTGGCTCAATATCATTA 57.428 29.630 19.03 19.03 37.27 1.90
49 50 6.971726 AATGACATGTGGCTCAATATCATT 57.028 33.333 1.15 15.01 34.31 2.57
50 51 7.722728 ACTTAATGACATGTGGCTCAATATCAT 59.277 33.333 1.15 1.08 31.69 2.45
51 52 7.056006 ACTTAATGACATGTGGCTCAATATCA 58.944 34.615 1.15 0.00 0.00 2.15
52 53 7.502120 ACTTAATGACATGTGGCTCAATATC 57.498 36.000 1.15 0.00 0.00 1.63
53 54 7.254898 CGAACTTAATGACATGTGGCTCAATAT 60.255 37.037 1.15 0.00 0.00 1.28
54 55 6.037062 CGAACTTAATGACATGTGGCTCAATA 59.963 38.462 1.15 0.00 0.00 1.90
55 56 5.163723 CGAACTTAATGACATGTGGCTCAAT 60.164 40.000 1.15 0.00 0.00 2.57
56 57 4.154015 CGAACTTAATGACATGTGGCTCAA 59.846 41.667 1.15 0.00 0.00 3.02
57 58 3.684305 CGAACTTAATGACATGTGGCTCA 59.316 43.478 1.15 0.00 0.00 4.26
58 59 3.932710 TCGAACTTAATGACATGTGGCTC 59.067 43.478 1.15 0.00 0.00 4.70
59 60 3.937814 TCGAACTTAATGACATGTGGCT 58.062 40.909 1.15 0.00 0.00 4.75
60 61 4.882671 ATCGAACTTAATGACATGTGGC 57.117 40.909 1.15 0.00 0.00 5.01
73 74 9.326413 CCTAACATGAAAATACCTATCGAACTT 57.674 33.333 0.00 0.00 0.00 2.66
89 90 8.554835 TGTTCGAACAATTATCCTAACATGAA 57.445 30.769 27.94 0.00 35.67 2.57
136 137 0.240678 TGAATGTCGTGCATTGCCAC 59.759 50.000 6.12 3.87 46.90 5.01
184 186 7.326248 TCCCCATCCCCTAGTTTTATACTAAT 58.674 38.462 0.00 0.00 38.84 1.73
192 194 4.168088 CACTTATCCCCATCCCCTAGTTTT 59.832 45.833 0.00 0.00 0.00 2.43
193 195 3.722101 CACTTATCCCCATCCCCTAGTTT 59.278 47.826 0.00 0.00 0.00 2.66
219 221 6.461231 GGTCACTCTACTTTTGACACTACACT 60.461 42.308 3.57 0.00 41.27 3.55
220 222 5.690857 GGTCACTCTACTTTTGACACTACAC 59.309 44.000 3.57 0.00 41.27 2.90
222 224 6.086785 AGGTCACTCTACTTTTGACACTAC 57.913 41.667 3.57 0.00 41.27 2.73
223 225 6.726490 AAGGTCACTCTACTTTTGACACTA 57.274 37.500 3.57 0.00 41.27 2.74
224 226 5.615925 AAGGTCACTCTACTTTTGACACT 57.384 39.130 3.57 0.00 41.27 3.55
297 299 6.650120 TGAGAACCAAGTCACTCTACTTTTT 58.350 36.000 0.00 0.00 37.61 1.94
298 300 6.235231 TGAGAACCAAGTCACTCTACTTTT 57.765 37.500 0.00 0.00 37.61 2.27
299 301 5.871396 TGAGAACCAAGTCACTCTACTTT 57.129 39.130 0.00 0.00 37.61 2.66
300 302 5.602628 GTTGAGAACCAAGTCACTCTACTT 58.397 41.667 0.00 0.00 40.33 2.24
301 303 4.261656 CGTTGAGAACCAAGTCACTCTACT 60.262 45.833 0.00 0.00 35.03 2.57
302 304 3.982058 CGTTGAGAACCAAGTCACTCTAC 59.018 47.826 0.00 0.00 35.03 2.59
303 305 3.005472 CCGTTGAGAACCAAGTCACTCTA 59.995 47.826 0.00 0.00 35.03 2.43
304 306 2.224066 CCGTTGAGAACCAAGTCACTCT 60.224 50.000 0.00 0.00 35.03 3.24
305 307 2.135933 CCGTTGAGAACCAAGTCACTC 58.864 52.381 0.00 0.00 35.03 3.51
306 308 1.202651 CCCGTTGAGAACCAAGTCACT 60.203 52.381 0.00 0.00 35.03 3.41
307 309 1.226746 CCCGTTGAGAACCAAGTCAC 58.773 55.000 0.00 0.00 35.03 3.67
308 310 0.534203 GCCCGTTGAGAACCAAGTCA 60.534 55.000 0.00 0.00 35.03 3.41
309 311 0.250338 AGCCCGTTGAGAACCAAGTC 60.250 55.000 0.00 0.00 35.03 3.01
346 352 2.642311 TGCTATGGTTCCTTCTGTTGGA 59.358 45.455 0.00 0.00 0.00 3.53
395 2843 1.140312 TCCTGGGATGCTATGGGTTC 58.860 55.000 0.00 0.00 0.00 3.62
429 2877 2.029649 TCTGGCTTTCCACGTACAGTAC 60.030 50.000 0.00 0.00 37.47 2.73
430 2878 2.230508 CTCTGGCTTTCCACGTACAGTA 59.769 50.000 0.00 0.00 37.47 2.74
431 2879 1.000955 CTCTGGCTTTCCACGTACAGT 59.999 52.381 0.00 0.00 37.47 3.55
432 2880 1.000955 ACTCTGGCTTTCCACGTACAG 59.999 52.381 0.00 0.00 37.47 2.74
433 2881 1.045407 ACTCTGGCTTTCCACGTACA 58.955 50.000 0.00 0.00 37.47 2.90
469 3135 2.752903 GGAAAAGAAATGGGCTAGCGAA 59.247 45.455 9.00 0.00 0.00 4.70
480 3165 0.039527 GCGTGCCACGGAAAAGAAAT 60.040 50.000 20.07 0.00 42.82 2.17
484 3169 2.252260 CTGCGTGCCACGGAAAAG 59.748 61.111 20.07 0.16 42.43 2.27
485 3170 3.959975 GCTGCGTGCCACGGAAAA 61.960 61.111 20.07 0.00 42.43 2.29
511 3196 2.250188 GGATTTTCATTTGCACGGTCG 58.750 47.619 0.00 0.00 0.00 4.79
514 3199 2.627863 TCGGATTTTCATTTGCACGG 57.372 45.000 0.00 0.00 0.00 4.94
516 3201 6.942886 TGTAATTCGGATTTTCATTTGCAC 57.057 33.333 0.00 0.00 0.00 4.57
522 3207 4.202010 CGGCCTTGTAATTCGGATTTTCAT 60.202 41.667 0.00 0.00 0.00 2.57
527 3212 2.285977 GTCGGCCTTGTAATTCGGATT 58.714 47.619 0.00 0.00 0.00 3.01
528 3213 1.474498 GGTCGGCCTTGTAATTCGGAT 60.474 52.381 0.00 0.00 0.00 4.18
532 3217 1.379527 CAGGGTCGGCCTTGTAATTC 58.620 55.000 10.53 0.00 37.12 2.17
560 3245 0.878523 TTTTCGTGGAGGCAGTGTCG 60.879 55.000 0.00 0.00 0.00 4.35
568 3254 1.303317 CCCTGGGTTTTCGTGGAGG 60.303 63.158 3.97 0.00 0.00 4.30
574 3260 0.963856 GTTAGGCCCCTGGGTTTTCG 60.964 60.000 12.71 0.00 37.65 3.46
575 3261 0.113580 TGTTAGGCCCCTGGGTTTTC 59.886 55.000 12.71 0.00 37.65 2.29
587 3273 1.866471 GCGGTTGTTTTGGTGTTAGGC 60.866 52.381 0.00 0.00 0.00 3.93
588 3274 1.269361 GGCGGTTGTTTTGGTGTTAGG 60.269 52.381 0.00 0.00 0.00 2.69
590 3276 0.745468 GGGCGGTTGTTTTGGTGTTA 59.255 50.000 0.00 0.00 0.00 2.41
596 3282 4.656117 GGGCGGGCGGTTGTTTTG 62.656 66.667 0.00 0.00 0.00 2.44
620 3306 2.615493 CGGGATTATTCGGAGAATGGGG 60.615 54.545 5.61 0.00 45.90 4.96
628 3314 0.670162 GACGGACGGGATTATTCGGA 59.330 55.000 0.00 0.00 0.00 4.55
629 3315 0.319297 GGACGGACGGGATTATTCGG 60.319 60.000 0.00 0.00 0.00 4.30
653 3339 3.640407 CGATGGCGGGATGGGGAT 61.640 66.667 0.00 0.00 0.00 3.85
656 3342 3.860605 TCACGATGGCGGGATGGG 61.861 66.667 0.00 0.00 46.66 4.00
676 3362 2.352561 TCTAGGGTTGTGGGATGGAA 57.647 50.000 0.00 0.00 0.00 3.53
680 3366 1.285078 GGCTTTCTAGGGTTGTGGGAT 59.715 52.381 0.00 0.00 0.00 3.85
681 3367 0.696501 GGCTTTCTAGGGTTGTGGGA 59.303 55.000 0.00 0.00 0.00 4.37
685 3371 1.683441 CGGGGCTTTCTAGGGTTGT 59.317 57.895 0.00 0.00 0.00 3.32
712 3398 4.825679 GGGAGTGGGGAGGGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
792 3478 4.388499 GGAAACCTCAGCGGCCGA 62.388 66.667 33.48 7.20 35.61 5.54
861 3547 2.203365 GAGATCGAGAGGCGGGGA 60.203 66.667 0.00 0.00 41.33 4.81
865 3551 1.234615 GGAGGAGAGATCGAGAGGCG 61.235 65.000 0.00 0.00 42.69 5.52
881 3567 4.899239 GGGCAGGCGACGATGGAG 62.899 72.222 0.00 0.00 0.00 3.86
927 3619 1.268335 CGGGGAACAAAACACAAGACG 60.268 52.381 0.00 0.00 0.00 4.18
928 3620 1.746787 ACGGGGAACAAAACACAAGAC 59.253 47.619 0.00 0.00 0.00 3.01
929 3621 2.131776 ACGGGGAACAAAACACAAGA 57.868 45.000 0.00 0.00 0.00 3.02
931 3623 2.299297 ACAAACGGGGAACAAAACACAA 59.701 40.909 0.00 0.00 0.00 3.33
1023 3716 3.834813 CGAAATCTATGAGGGGAGATGGA 59.165 47.826 0.00 0.00 32.66 3.41
1025 3718 4.881019 ACGAAATCTATGAGGGGAGATG 57.119 45.455 0.00 0.00 32.66 2.90
1026 3719 4.656112 ACAACGAAATCTATGAGGGGAGAT 59.344 41.667 0.00 0.00 33.75 2.75
1027 3720 4.030913 ACAACGAAATCTATGAGGGGAGA 58.969 43.478 0.00 0.00 0.00 3.71
1028 3721 4.408182 ACAACGAAATCTATGAGGGGAG 57.592 45.455 0.00 0.00 0.00 4.30
1029 3722 4.837093 AACAACGAAATCTATGAGGGGA 57.163 40.909 0.00 0.00 0.00 4.81
1030 3723 4.941263 TCAAACAACGAAATCTATGAGGGG 59.059 41.667 0.00 0.00 0.00 4.79
1031 3724 6.683974 ATCAAACAACGAAATCTATGAGGG 57.316 37.500 0.00 0.00 0.00 4.30
1036 3729 6.676950 TGCACAATCAAACAACGAAATCTAT 58.323 32.000 0.00 0.00 0.00 1.98
1059 3752 1.366111 CCCCGAACTACGCAACCATG 61.366 60.000 0.00 0.00 41.07 3.66
1087 3780 2.352651 CCAACCGCATCAACATCTACTG 59.647 50.000 0.00 0.00 0.00 2.74
1104 3797 1.009389 CGGCTCGACAGAACTCCAAC 61.009 60.000 0.00 0.00 0.00 3.77
1107 3800 2.507324 GCGGCTCGACAGAACTCC 60.507 66.667 0.00 0.00 0.00 3.85
1117 3810 3.264897 CCAAATCGGAGCGGCTCG 61.265 66.667 22.63 17.44 36.56 5.03
1143 3836 2.202518 CAAGCCAGCCGCAAATCG 60.203 61.111 0.00 0.00 41.38 3.34
1153 3846 4.733815 GCATCAATCATCAGAACAAGCCAG 60.734 45.833 0.00 0.00 0.00 4.85
1169 3862 1.069765 CCTACCGAGCCGCATCAAT 59.930 57.895 0.00 0.00 0.00 2.57
1179 3872 0.249238 GCATGCAGAGACCTACCGAG 60.249 60.000 14.21 0.00 0.00 4.63
1181 3874 1.589993 CGCATGCAGAGACCTACCG 60.590 63.158 19.57 0.00 0.00 4.02
1198 3893 1.135373 ACATCCAGCAGAGACGTTACG 60.135 52.381 2.19 2.19 0.00 3.18
1232 3927 3.012934 ACCCTAAAAATCCCACATCCG 57.987 47.619 0.00 0.00 0.00 4.18
1246 3942 9.713684 AAATCAATAATTGGATCAGAACCCTAA 57.286 29.630 0.00 0.00 0.00 2.69
1281 3977 4.778143 GGGCCATCGGTTCAGCGT 62.778 66.667 4.39 0.00 0.00 5.07
1287 3983 1.745827 CGAGTAAATGGGCCATCGGTT 60.746 52.381 21.48 13.30 0.00 4.44
1342 4038 1.253116 CAAACTTGCGCACGATCATG 58.747 50.000 21.81 9.33 0.00 3.07
1349 4045 3.424962 GGAGATCTAACAAACTTGCGCAC 60.425 47.826 11.12 0.00 0.00 5.34
1406 4104 4.386711 AGGTTACAGCGACTTAAAAGCTT 58.613 39.130 0.00 0.00 39.48 3.74
1427 4125 4.406069 CATTCCAACTGTGTCGCATAAAG 58.594 43.478 0.00 0.00 0.00 1.85
1429 4127 2.746904 CCATTCCAACTGTGTCGCATAA 59.253 45.455 0.00 0.00 0.00 1.90
1439 4137 1.352352 ACCCTGAGTCCATTCCAACTG 59.648 52.381 0.00 0.00 0.00 3.16
1452 4150 5.106436 GGGTAACAATAAAAACGACCCTGAG 60.106 44.000 0.00 0.00 41.60 3.35
1459 4157 7.818930 ACTAATCTCGGGTAACAATAAAAACGA 59.181 33.333 0.00 0.00 39.74 3.85
1492 4190 5.483811 AGCTAAGCTAAGTGAAGGAAGAAC 58.516 41.667 0.00 0.00 36.99 3.01
1494 4192 5.482908 CAAGCTAAGCTAAGTGAAGGAAGA 58.517 41.667 0.00 0.00 38.25 2.87
1499 4197 3.373439 CCAGCAAGCTAAGCTAAGTGAAG 59.627 47.826 12.67 0.43 41.14 3.02
1508 4206 1.808411 TGTACACCAGCAAGCTAAGC 58.192 50.000 3.00 3.00 0.00 3.09
1529 4230 3.426695 GCAAGCAGAAGCACATTAATCGT 60.427 43.478 0.00 0.00 45.49 3.73
1530 4231 3.103738 GCAAGCAGAAGCACATTAATCG 58.896 45.455 0.00 0.00 45.49 3.34
1538 4239 1.336125 AGAACTTGCAAGCAGAAGCAC 59.664 47.619 26.27 8.63 45.49 4.40
1553 4255 7.076446 ACATGGGATATAAGGTCACTAGAACT 58.924 38.462 0.00 0.00 45.93 3.01
1600 4309 6.183361 ACCTATTACAAGGATAGAGCACAAGG 60.183 42.308 0.00 0.00 39.15 3.61
1609 4318 8.070171 CGAATGCAAAACCTATTACAAGGATAG 58.930 37.037 0.00 0.00 39.15 2.08
1618 4327 3.357203 TGCCCGAATGCAAAACCTATTA 58.643 40.909 0.00 0.00 38.56 0.98
1619 4328 2.166254 CTGCCCGAATGCAAAACCTATT 59.834 45.455 0.00 0.00 41.51 1.73
1620 4329 1.750778 CTGCCCGAATGCAAAACCTAT 59.249 47.619 0.00 0.00 41.51 2.57
1802 4511 5.234972 TCGCTGACTCACTGCATATTTATTG 59.765 40.000 0.00 0.00 42.30 1.90
1803 4512 5.359756 TCGCTGACTCACTGCATATTTATT 58.640 37.500 0.00 0.00 42.30 1.40
1804 4513 4.948847 TCGCTGACTCACTGCATATTTAT 58.051 39.130 0.00 0.00 42.30 1.40
1805 4514 4.363138 CTCGCTGACTCACTGCATATTTA 58.637 43.478 0.00 0.00 42.30 1.40
1963 4680 7.644157 AGAAAAGAAAACAGTCGTCAATTTAGC 59.356 33.333 0.00 0.00 0.00 3.09
1974 4691 7.089770 ACTGAAGGAAGAAAAGAAAACAGTC 57.910 36.000 0.00 0.00 30.77 3.51
2002 4719 2.328099 GCTGTCACCCTTTGAGCGG 61.328 63.158 0.00 0.00 33.71 5.52
2019 4736 2.524148 AACCACCCCAAAGCAGGC 60.524 61.111 0.00 0.00 0.00 4.85
2110 4830 3.494626 CACGCGCCTACAAGAAATATCAT 59.505 43.478 5.73 0.00 0.00 2.45
2116 4836 0.584396 CAACACGCGCCTACAAGAAA 59.416 50.000 5.73 0.00 0.00 2.52
2250 4970 5.907197 AACGCCTGAACATAGATAATTCG 57.093 39.130 0.00 0.00 0.00 3.34
2267 4989 4.333926 AGAATCTTGCATCTTTCTAACGCC 59.666 41.667 4.30 0.00 0.00 5.68
2343 5066 2.791004 GTGTGTGTTCAATGCTTCAAGC 59.209 45.455 1.04 1.04 42.82 4.01
2421 5144 2.843730 ACCATGGTAGAGGTTGCATGTA 59.156 45.455 18.10 0.00 33.39 2.29
2830 5584 9.212593 TGCAAGGGATCACTAGCATATATATTA 57.787 33.333 0.00 0.00 0.00 0.98
2831 5585 8.094284 TGCAAGGGATCACTAGCATATATATT 57.906 34.615 0.00 0.00 0.00 1.28
2841 5595 4.213564 AGAACTTGCAAGGGATCACTAG 57.786 45.455 29.18 2.09 0.00 2.57
2873 5633 9.739276 TGACCAGACTTCTAAACAATTAATGAT 57.261 29.630 0.00 0.00 0.00 2.45
2894 5654 4.334203 GTCACAATTAACACACAGTGACCA 59.666 41.667 7.81 0.00 46.01 4.02
3039 5806 7.492669 GCTGCATGACTCAGAAGTAGTTAAATA 59.507 37.037 0.00 0.00 35.28 1.40
3043 5810 4.464244 AGCTGCATGACTCAGAAGTAGTTA 59.536 41.667 1.02 0.00 35.28 2.24
3065 5832 1.201647 CAGTGATCAAGGCAAGGCAAG 59.798 52.381 0.00 0.00 0.00 4.01
3123 5890 8.458843 AGAATGCCACAACTATAAACACATAAC 58.541 33.333 0.00 0.00 0.00 1.89
3262 6029 8.349245 CACAACTACCAAACACATAATTGAGAA 58.651 33.333 0.00 0.00 0.00 2.87
3316 6083 7.648142 TGAGTTTTGGTTCATGTTAAGATCAC 58.352 34.615 0.00 0.00 0.00 3.06
3748 6515 0.904649 ATCACGATCCCAAGCACTGA 59.095 50.000 0.00 0.00 0.00 3.41
3775 6542 7.554959 TTGAGTCCTAGATAGGTTCTTTTGT 57.445 36.000 5.82 0.00 44.02 2.83
3777 6544 9.674068 GAATTTGAGTCCTAGATAGGTTCTTTT 57.326 33.333 5.82 2.46 44.02 2.27
3797 6564 5.331902 ACAACTGTTTCGACACTGAATTTG 58.668 37.500 14.54 10.84 0.00 2.32
3873 6643 8.792633 ACTCTTAGCATAGCACAAAAATTAACA 58.207 29.630 0.00 0.00 0.00 2.41
3879 6649 7.437862 CCAAAAACTCTTAGCATAGCACAAAAA 59.562 33.333 0.00 0.00 0.00 1.94
3909 6679 1.233019 CAACAGACTGCAAGACCAGG 58.767 55.000 1.25 0.00 37.16 4.45
3916 6686 5.865085 ACCTAATAGAACAACAGACTGCAA 58.135 37.500 1.25 0.00 0.00 4.08
3920 6690 8.100791 TGCATTAACCTAATAGAACAACAGACT 58.899 33.333 0.00 0.00 0.00 3.24
3925 6695 9.855021 ACAAATGCATTAACCTAATAGAACAAC 57.145 29.630 13.39 0.00 0.00 3.32
3926 6696 9.853555 CACAAATGCATTAACCTAATAGAACAA 57.146 29.630 13.39 0.00 0.00 2.83
3928 6698 9.503427 GACACAAATGCATTAACCTAATAGAAC 57.497 33.333 13.39 0.00 0.00 3.01
3933 6704 5.128663 GGGGACACAAATGCATTAACCTAAT 59.871 40.000 13.39 0.00 0.00 1.73
3935 6706 4.020543 GGGGACACAAATGCATTAACCTA 58.979 43.478 13.39 0.00 0.00 3.08
3956 6727 6.997655 TCACTTAAGTAGATGCTCCATATGG 58.002 40.000 16.25 16.25 0.00 2.74
3959 6730 6.516718 GCTTCACTTAAGTAGATGCTCCATA 58.483 40.000 23.36 5.73 37.53 2.74
3962 6733 3.799420 CGCTTCACTTAAGTAGATGCTCC 59.201 47.826 25.34 11.40 37.53 4.70
3967 6738 7.169982 GCAATATCACGCTTCACTTAAGTAGAT 59.830 37.037 8.04 6.15 37.53 1.98
3968 6739 6.475727 GCAATATCACGCTTCACTTAAGTAGA 59.524 38.462 8.04 5.78 37.53 2.59
3975 6753 3.338249 ACAGCAATATCACGCTTCACTT 58.662 40.909 0.00 0.00 35.96 3.16
3976 6754 2.977914 ACAGCAATATCACGCTTCACT 58.022 42.857 0.00 0.00 35.96 3.41
3982 6760 2.286418 GCTACCAACAGCAATATCACGC 60.286 50.000 0.00 0.00 41.40 5.34
3986 6764 1.264288 GCGGCTACCAACAGCAATATC 59.736 52.381 0.00 0.00 43.67 1.63
3999 6780 2.924290 CTCAGAAACAGTTAGCGGCTAC 59.076 50.000 9.68 5.43 0.00 3.58
4030 6811 1.867233 CACTACGAAGGCCATACATGC 59.133 52.381 5.01 0.00 0.00 4.06
4031 6812 3.452755 TCACTACGAAGGCCATACATG 57.547 47.619 5.01 0.00 0.00 3.21
4032 6813 4.587262 TGTATCACTACGAAGGCCATACAT 59.413 41.667 5.01 0.00 0.00 2.29
4045 6826 3.181474 GGAAGGCCTGAGTGTATCACTAC 60.181 52.174 5.69 0.00 45.44 2.73
4049 6830 1.555075 GTGGAAGGCCTGAGTGTATCA 59.445 52.381 5.69 0.00 36.21 2.15
4051 6832 1.656587 TGTGGAAGGCCTGAGTGTAT 58.343 50.000 5.69 0.00 34.31 2.29
4052 6833 1.071699 GTTGTGGAAGGCCTGAGTGTA 59.928 52.381 5.69 0.00 34.31 2.90
4054 6835 1.230635 CGTTGTGGAAGGCCTGAGTG 61.231 60.000 5.69 0.00 34.31 3.51
4057 6838 0.320374 CTACGTTGTGGAAGGCCTGA 59.680 55.000 5.69 0.00 34.31 3.86
4071 6852 0.741927 GTATTTGGCACCGGCTACGT 60.742 55.000 0.00 0.00 40.87 3.57
4138 6919 1.213733 CTGCGCTGTGAGATCGATGG 61.214 60.000 9.73 0.00 0.00 3.51
4155 6936 1.178534 TTTTTCCTGCCGAAGCCCTG 61.179 55.000 0.00 0.00 38.69 4.45
4179 6960 4.580167 TGAACAAAATGTCTTCTGACCCAG 59.420 41.667 0.00 0.00 42.28 4.45
4184 6965 7.825681 TCAACTTTGAACAAAATGTCTTCTGA 58.174 30.769 1.76 0.00 33.55 3.27
4234 7066 1.322538 GCACCGATGCCCAATTCCTT 61.323 55.000 0.00 0.00 46.97 3.36
4250 7082 0.461961 ATCGGAGCAAGTAGGAGCAC 59.538 55.000 0.00 0.00 0.00 4.40
4251 7083 0.461548 CATCGGAGCAAGTAGGAGCA 59.538 55.000 0.00 0.00 0.00 4.26
4252 7084 0.878086 GCATCGGAGCAAGTAGGAGC 60.878 60.000 0.00 0.00 0.00 4.70
4253 7085 0.249657 GGCATCGGAGCAAGTAGGAG 60.250 60.000 2.61 0.00 35.83 3.69
4254 7086 0.975556 TGGCATCGGAGCAAGTAGGA 60.976 55.000 2.61 0.00 35.83 2.94
4255 7087 0.107456 ATGGCATCGGAGCAAGTAGG 59.893 55.000 0.00 0.00 35.83 3.18
4256 7088 1.202568 TCATGGCATCGGAGCAAGTAG 60.203 52.381 0.00 0.00 35.83 2.57
4297 7129 3.345808 CACGTTGTGAGGCCGGTG 61.346 66.667 1.90 0.00 35.23 4.94
4298 7130 3.542676 TCACGTTGTGAGGCCGGT 61.543 61.111 1.90 0.00 37.67 5.28
4325 7157 6.924060 GCTAAATTGACTTCTAGCTCCGATAA 59.076 38.462 0.00 0.00 35.06 1.75
4355 7187 9.662947 GAGACCTTTTACTATGTAGGCTAAAAA 57.337 33.333 0.00 0.00 0.00 1.94
4360 7192 5.958987 ACTGAGACCTTTTACTATGTAGGCT 59.041 40.000 0.00 0.00 0.00 4.58
4370 7202 6.374333 TGGCATAAATCACTGAGACCTTTTAC 59.626 38.462 0.00 0.00 0.00 2.01
4372 7204 5.324409 TGGCATAAATCACTGAGACCTTTT 58.676 37.500 0.00 0.00 0.00 2.27
4373 7205 4.922206 TGGCATAAATCACTGAGACCTTT 58.078 39.130 0.00 0.00 0.00 3.11
4381 7213 7.273320 AGAGATTTCATGGCATAAATCACTG 57.727 36.000 26.19 8.81 42.14 3.66
4384 7216 5.049198 GCGAGAGATTTCATGGCATAAATCA 60.049 40.000 26.19 2.44 42.14 2.57
4386 7218 4.217118 GGCGAGAGATTTCATGGCATAAAT 59.783 41.667 0.00 7.10 0.00 1.40
4388 7220 3.141398 GGCGAGAGATTTCATGGCATAA 58.859 45.455 0.00 0.00 0.00 1.90
4389 7221 2.104622 TGGCGAGAGATTTCATGGCATA 59.895 45.455 0.00 0.00 32.82 3.14
4390 7222 1.134007 TGGCGAGAGATTTCATGGCAT 60.134 47.619 0.00 0.00 32.82 4.40
4392 7224 0.942962 CTGGCGAGAGATTTCATGGC 59.057 55.000 0.00 0.00 0.00 4.40
4393 7225 0.942962 GCTGGCGAGAGATTTCATGG 59.057 55.000 0.00 0.00 0.00 3.66
4394 7226 0.942962 GGCTGGCGAGAGATTTCATG 59.057 55.000 0.00 0.00 0.00 3.07
4396 7228 1.153568 CGGCTGGCGAGAGATTTCA 60.154 57.895 19.64 0.00 0.00 2.69
4397 7229 1.153549 ACGGCTGGCGAGAGATTTC 60.154 57.895 30.58 0.00 0.00 2.17
4398 7230 1.448540 CACGGCTGGCGAGAGATTT 60.449 57.895 30.58 2.32 0.00 2.17
4400 7232 1.680522 AATCACGGCTGGCGAGAGAT 61.681 55.000 30.58 23.36 0.00 2.75
4401 7233 1.888436 AAATCACGGCTGGCGAGAGA 61.888 55.000 30.58 22.29 0.00 3.10
4402 7234 1.424493 GAAATCACGGCTGGCGAGAG 61.424 60.000 30.58 18.05 0.00 3.20
4403 7235 1.447838 GAAATCACGGCTGGCGAGA 60.448 57.895 30.58 26.90 0.00 4.04
4404 7236 1.091771 ATGAAATCACGGCTGGCGAG 61.092 55.000 30.58 22.34 0.00 5.03
4406 7238 1.063006 CATGAAATCACGGCTGGCG 59.937 57.895 22.58 22.58 0.00 5.69
4407 7239 0.379669 CTCATGAAATCACGGCTGGC 59.620 55.000 0.00 0.00 0.00 4.85
4408 7240 2.028420 TCTCATGAAATCACGGCTGG 57.972 50.000 0.00 0.00 0.00 4.85
4409 7241 4.095334 TGAAATCTCATGAAATCACGGCTG 59.905 41.667 0.00 0.00 0.00 4.85
4411 7243 4.142622 TGTGAAATCTCATGAAATCACGGC 60.143 41.667 17.68 3.73 33.05 5.68
4412 7244 5.550232 TGTGAAATCTCATGAAATCACGG 57.450 39.130 17.68 0.00 33.05 4.94
4414 7246 7.587629 TGACTTGTGAAATCTCATGAAATCAC 58.412 34.615 16.75 16.75 33.05 3.06
4415 7247 7.748691 TGACTTGTGAAATCTCATGAAATCA 57.251 32.000 0.00 0.00 33.05 2.57
4416 7248 9.467258 TTTTGACTTGTGAAATCTCATGAAATC 57.533 29.630 0.00 0.00 33.05 2.17
4417 7249 9.472361 CTTTTGACTTGTGAAATCTCATGAAAT 57.528 29.630 0.00 0.00 33.05 2.17
4418 7250 8.469200 ACTTTTGACTTGTGAAATCTCATGAAA 58.531 29.630 0.00 0.00 33.05 2.69
4419 7251 7.999679 ACTTTTGACTTGTGAAATCTCATGAA 58.000 30.769 0.00 0.00 33.05 2.57
4421 7253 8.537223 CAAACTTTTGACTTGTGAAATCTCATG 58.463 33.333 0.00 0.00 40.55 3.07
4423 7255 7.035004 CCAAACTTTTGACTTGTGAAATCTCA 58.965 34.615 3.17 0.00 40.55 3.27
4424 7256 6.476706 CCCAAACTTTTGACTTGTGAAATCTC 59.523 38.462 3.17 0.00 40.55 2.75
4425 7257 6.340522 CCCAAACTTTTGACTTGTGAAATCT 58.659 36.000 3.17 0.00 40.55 2.40
4426 7258 5.006649 GCCCAAACTTTTGACTTGTGAAATC 59.993 40.000 3.17 0.00 40.55 2.17
4427 7259 4.875536 GCCCAAACTTTTGACTTGTGAAAT 59.124 37.500 3.17 0.00 40.55 2.17
4429 7261 3.259374 TGCCCAAACTTTTGACTTGTGAA 59.741 39.130 3.17 0.00 40.55 3.18
4430 7262 2.828520 TGCCCAAACTTTTGACTTGTGA 59.171 40.909 3.17 0.00 40.55 3.58
4431 7263 3.244033 TGCCCAAACTTTTGACTTGTG 57.756 42.857 3.17 0.00 40.55 3.33
4433 7265 4.502962 TCTTTGCCCAAACTTTTGACTTG 58.497 39.130 3.17 0.00 40.55 3.16
4437 7269 5.738909 TGAATTCTTTGCCCAAACTTTTGA 58.261 33.333 7.05 0.00 40.55 2.69
4438 7270 6.622833 ATGAATTCTTTGCCCAAACTTTTG 57.377 33.333 7.05 0.00 37.90 2.44
4439 7271 7.228507 GGTTATGAATTCTTTGCCCAAACTTTT 59.771 33.333 7.05 0.00 0.00 2.27
4442 7274 5.566627 CGGTTATGAATTCTTTGCCCAAACT 60.567 40.000 7.05 0.00 0.00 2.66
4443 7275 4.625311 CGGTTATGAATTCTTTGCCCAAAC 59.375 41.667 7.05 1.12 0.00 2.93
4445 7277 3.367910 GCGGTTATGAATTCTTTGCCCAA 60.368 43.478 7.05 0.00 0.00 4.12
4447 7279 2.481276 GGCGGTTATGAATTCTTTGCCC 60.481 50.000 7.05 0.00 33.95 5.36
4448 7280 2.794631 CGGCGGTTATGAATTCTTTGCC 60.795 50.000 7.05 10.09 36.64 4.52
4449 7281 2.096819 TCGGCGGTTATGAATTCTTTGC 59.903 45.455 7.21 2.55 0.00 3.68
4450 7282 3.374058 AGTCGGCGGTTATGAATTCTTTG 59.626 43.478 7.21 0.00 0.00 2.77
4451 7283 3.606687 AGTCGGCGGTTATGAATTCTTT 58.393 40.909 7.21 0.00 0.00 2.52
4452 7284 3.261981 AGTCGGCGGTTATGAATTCTT 57.738 42.857 7.21 2.84 0.00 2.52
4453 7285 2.981859 AGTCGGCGGTTATGAATTCT 57.018 45.000 7.21 0.00 0.00 2.40
4454 7286 6.696148 CCTATATAGTCGGCGGTTATGAATTC 59.304 42.308 7.21 0.00 0.00 2.17
4455 7287 6.154021 ACCTATATAGTCGGCGGTTATGAATT 59.846 38.462 7.21 0.00 0.00 2.17
4456 7288 5.655532 ACCTATATAGTCGGCGGTTATGAAT 59.344 40.000 7.21 0.27 0.00 2.57
4457 7289 5.012239 ACCTATATAGTCGGCGGTTATGAA 58.988 41.667 7.21 0.00 0.00 2.57
4458 7290 4.592942 ACCTATATAGTCGGCGGTTATGA 58.407 43.478 7.21 0.00 0.00 2.15
4459 7291 4.978083 ACCTATATAGTCGGCGGTTATG 57.022 45.455 7.21 0.00 0.00 1.90
4460 7292 7.466746 TTTTACCTATATAGTCGGCGGTTAT 57.533 36.000 7.21 8.12 0.00 1.89
4461 7293 6.892658 TTTTACCTATATAGTCGGCGGTTA 57.107 37.500 7.21 0.00 0.00 2.85
4462 7294 5.789643 TTTTACCTATATAGTCGGCGGTT 57.210 39.130 7.21 0.00 0.00 4.44
4465 7297 6.205101 AGGATTTTACCTATATAGTCGGCG 57.795 41.667 0.00 0.00 38.65 6.46
4466 7298 8.747471 ACTAAGGATTTTACCTATATAGTCGGC 58.253 37.037 8.92 0.00 39.62 5.54
4475 7307 7.336396 GTGTGGACACTAAGGATTTTACCTAT 58.664 38.462 2.53 0.00 43.25 2.57
4476 7308 6.296030 GGTGTGGACACTAAGGATTTTACCTA 60.296 42.308 9.69 0.00 45.73 3.08
4477 7309 5.514310 GGTGTGGACACTAAGGATTTTACCT 60.514 44.000 9.69 0.00 45.73 3.08
4479 7311 5.310451 TGGTGTGGACACTAAGGATTTTAC 58.690 41.667 9.69 0.00 45.73 2.01
4480 7312 5.570205 TGGTGTGGACACTAAGGATTTTA 57.430 39.130 9.69 0.00 45.73 1.52
4481 7313 4.447138 TGGTGTGGACACTAAGGATTTT 57.553 40.909 9.69 0.00 45.73 1.82
4482 7314 4.447138 TTGGTGTGGACACTAAGGATTT 57.553 40.909 9.69 0.00 45.73 2.17
4488 7320 4.497291 AGTTTCTTGGTGTGGACACTAA 57.503 40.909 9.69 8.93 45.73 2.24
4489 7321 4.202284 GGTAGTTTCTTGGTGTGGACACTA 60.202 45.833 9.69 0.67 45.73 2.74
4490 7322 3.433173 GGTAGTTTCTTGGTGTGGACACT 60.433 47.826 9.69 0.00 45.73 3.55
4491 7323 2.876550 GGTAGTTTCTTGGTGTGGACAC 59.123 50.000 0.99 0.99 45.72 3.67
4492 7324 2.506231 TGGTAGTTTCTTGGTGTGGACA 59.494 45.455 0.00 0.00 0.00 4.02
4493 7325 2.876550 GTGGTAGTTTCTTGGTGTGGAC 59.123 50.000 0.00 0.00 0.00 4.02
4494 7326 2.506231 TGTGGTAGTTTCTTGGTGTGGA 59.494 45.455 0.00 0.00 0.00 4.02
4495 7327 2.925724 TGTGGTAGTTTCTTGGTGTGG 58.074 47.619 0.00 0.00 0.00 4.17
4496 7328 4.133820 TGATGTGGTAGTTTCTTGGTGTG 58.866 43.478 0.00 0.00 0.00 3.82
4497 7329 4.431416 TGATGTGGTAGTTTCTTGGTGT 57.569 40.909 0.00 0.00 0.00 4.16
4498 7330 5.063204 TCTTGATGTGGTAGTTTCTTGGTG 58.937 41.667 0.00 0.00 0.00 4.17
4499 7331 5.304686 TCTTGATGTGGTAGTTTCTTGGT 57.695 39.130 0.00 0.00 0.00 3.67
4500 7332 5.765182 AGTTCTTGATGTGGTAGTTTCTTGG 59.235 40.000 0.00 0.00 0.00 3.61
4501 7333 6.867662 AGTTCTTGATGTGGTAGTTTCTTG 57.132 37.500 0.00 0.00 0.00 3.02
4502 7334 7.227512 CAGAAGTTCTTGATGTGGTAGTTTCTT 59.772 37.037 1.56 0.00 0.00 2.52
4504 7336 6.483640 ACAGAAGTTCTTGATGTGGTAGTTTC 59.516 38.462 1.56 0.00 0.00 2.78
4505 7337 6.357367 ACAGAAGTTCTTGATGTGGTAGTTT 58.643 36.000 1.56 0.00 0.00 2.66
4506 7338 5.930135 ACAGAAGTTCTTGATGTGGTAGTT 58.070 37.500 1.56 0.00 0.00 2.24
4507 7339 5.552870 ACAGAAGTTCTTGATGTGGTAGT 57.447 39.130 1.56 0.00 0.00 2.73
4509 7341 5.680619 ACAACAGAAGTTCTTGATGTGGTA 58.319 37.500 10.83 0.00 35.28 3.25
4511 7343 5.505173 AACAACAGAAGTTCTTGATGTGG 57.495 39.130 10.83 4.14 35.28 4.17
4512 7344 5.745294 CCAAACAACAGAAGTTCTTGATGTG 59.255 40.000 10.83 4.59 35.28 3.21
4513 7345 5.652014 TCCAAACAACAGAAGTTCTTGATGT 59.348 36.000 10.83 9.56 35.28 3.06
4514 7346 6.135290 TCCAAACAACAGAAGTTCTTGATG 57.865 37.500 10.83 9.01 35.28 3.07
4516 7348 5.652014 ACATCCAAACAACAGAAGTTCTTGA 59.348 36.000 10.83 0.00 35.28 3.02
4517 7349 5.745294 CACATCCAAACAACAGAAGTTCTTG 59.255 40.000 1.56 2.69 35.28 3.02
4520 7352 5.499139 TCACATCCAAACAACAGAAGTTC 57.501 39.130 0.00 0.00 35.28 3.01
4522 7354 3.885297 CCTCACATCCAAACAACAGAAGT 59.115 43.478 0.00 0.00 0.00 3.01
4523 7355 3.885297 ACCTCACATCCAAACAACAGAAG 59.115 43.478 0.00 0.00 0.00 2.85
4524 7356 3.897239 ACCTCACATCCAAACAACAGAA 58.103 40.909 0.00 0.00 0.00 3.02
4527 7359 3.631686 CAGAACCTCACATCCAAACAACA 59.368 43.478 0.00 0.00 0.00 3.33
4528 7360 3.632145 ACAGAACCTCACATCCAAACAAC 59.368 43.478 0.00 0.00 0.00 3.32
4529 7361 3.882888 GACAGAACCTCACATCCAAACAA 59.117 43.478 0.00 0.00 0.00 2.83
4530 7362 3.136443 AGACAGAACCTCACATCCAAACA 59.864 43.478 0.00 0.00 0.00 2.83
4531 7363 3.744660 AGACAGAACCTCACATCCAAAC 58.255 45.455 0.00 0.00 0.00 2.93
4533 7365 3.390967 TGAAGACAGAACCTCACATCCAA 59.609 43.478 0.00 0.00 0.00 3.53
4534 7366 2.972021 TGAAGACAGAACCTCACATCCA 59.028 45.455 0.00 0.00 0.00 3.41
4535 7367 3.685139 TGAAGACAGAACCTCACATCC 57.315 47.619 0.00 0.00 0.00 3.51
4539 7371 6.293680 GGAGAAAAATGAAGACAGAACCTCAC 60.294 42.308 0.00 0.00 0.00 3.51
4540 7372 5.765182 GGAGAAAAATGAAGACAGAACCTCA 59.235 40.000 0.00 0.00 0.00 3.86
4541 7373 6.000840 AGGAGAAAAATGAAGACAGAACCTC 58.999 40.000 0.00 0.00 0.00 3.85
4542 7374 5.946486 AGGAGAAAAATGAAGACAGAACCT 58.054 37.500 0.00 0.00 0.00 3.50
4543 7375 5.106908 CGAGGAGAAAAATGAAGACAGAACC 60.107 44.000 0.00 0.00 0.00 3.62
4544 7376 5.467063 ACGAGGAGAAAAATGAAGACAGAAC 59.533 40.000 0.00 0.00 0.00 3.01
4545 7377 5.611374 ACGAGGAGAAAAATGAAGACAGAA 58.389 37.500 0.00 0.00 0.00 3.02
4546 7378 5.215252 ACGAGGAGAAAAATGAAGACAGA 57.785 39.130 0.00 0.00 0.00 3.41
4548 7380 4.750098 GTGACGAGGAGAAAAATGAAGACA 59.250 41.667 0.00 0.00 0.00 3.41
4549 7381 4.991687 AGTGACGAGGAGAAAAATGAAGAC 59.008 41.667 0.00 0.00 0.00 3.01
4550 7382 5.215252 AGTGACGAGGAGAAAAATGAAGA 57.785 39.130 0.00 0.00 0.00 2.87
4551 7383 4.090642 CGAGTGACGAGGAGAAAAATGAAG 59.909 45.833 0.00 0.00 45.77 3.02
4553 7385 3.005472 ACGAGTGACGAGGAGAAAAATGA 59.995 43.478 0.00 0.00 45.77 2.57
4555 7387 3.662247 ACGAGTGACGAGGAGAAAAAT 57.338 42.857 0.00 0.00 45.77 1.82
4556 7388 3.067742 AGAACGAGTGACGAGGAGAAAAA 59.932 43.478 0.00 0.00 45.77 1.94
4557 7389 2.621998 AGAACGAGTGACGAGGAGAAAA 59.378 45.455 0.00 0.00 45.77 2.29
4558 7390 2.228059 AGAACGAGTGACGAGGAGAAA 58.772 47.619 0.00 0.00 45.77 2.52
4559 7391 1.893544 AGAACGAGTGACGAGGAGAA 58.106 50.000 0.00 0.00 45.77 2.87
4560 7392 2.289257 TGTAGAACGAGTGACGAGGAGA 60.289 50.000 0.00 0.00 45.77 3.71
4561 7393 2.074576 TGTAGAACGAGTGACGAGGAG 58.925 52.381 0.00 0.00 45.77 3.69
4562 7394 2.174363 TGTAGAACGAGTGACGAGGA 57.826 50.000 0.00 0.00 45.77 3.71
4563 7395 4.341099 GTTATGTAGAACGAGTGACGAGG 58.659 47.826 0.00 0.00 45.77 4.63
4564 7396 4.094590 AGGTTATGTAGAACGAGTGACGAG 59.905 45.833 0.00 0.00 45.77 4.18
4567 7399 9.793252 TTTATTAGGTTATGTAGAACGAGTGAC 57.207 33.333 0.00 0.00 0.00 3.67
4596 7428 8.962679 GGAGTATTTGTTTATGGACCATTGTTA 58.037 33.333 13.40 0.00 0.00 2.41
4597 7429 7.453126 TGGAGTATTTGTTTATGGACCATTGTT 59.547 33.333 13.40 0.00 0.00 2.83
4598 7430 6.951198 TGGAGTATTTGTTTATGGACCATTGT 59.049 34.615 13.40 0.00 0.00 2.71
4599 7431 7.403312 TGGAGTATTTGTTTATGGACCATTG 57.597 36.000 13.40 0.00 0.00 2.82
4600 7432 8.061304 AGATGGAGTATTTGTTTATGGACCATT 58.939 33.333 13.40 0.00 35.08 3.16
4602 7434 6.828273 CAGATGGAGTATTTGTTTATGGACCA 59.172 38.462 0.00 0.00 0.00 4.02
4603 7435 6.828785 ACAGATGGAGTATTTGTTTATGGACC 59.171 38.462 0.00 0.00 30.50 4.46
4606 7438 9.396022 ACTTACAGATGGAGTATTTGTTTATGG 57.604 33.333 0.00 0.00 35.83 2.74
4608 7440 9.959721 ACACTTACAGATGGAGTATTTGTTTAT 57.040 29.630 0.00 0.00 35.83 1.40
4610 7442 9.959721 ATACACTTACAGATGGAGTATTTGTTT 57.040 29.630 0.00 0.00 35.83 2.83
4611 7443 9.601217 GATACACTTACAGATGGAGTATTTGTT 57.399 33.333 0.00 0.00 35.83 2.83
4612 7444 7.921214 CGATACACTTACAGATGGAGTATTTGT 59.079 37.037 0.00 0.00 37.77 2.83
4613 7445 7.921214 ACGATACACTTACAGATGGAGTATTTG 59.079 37.037 0.00 0.00 0.00 2.32
4614 7446 7.921214 CACGATACACTTACAGATGGAGTATTT 59.079 37.037 0.00 0.00 0.00 1.40
4615 7447 7.068348 ACACGATACACTTACAGATGGAGTATT 59.932 37.037 0.00 0.00 0.00 1.89
4616 7448 6.546403 ACACGATACACTTACAGATGGAGTAT 59.454 38.462 0.00 0.00 0.00 2.12
4617 7449 5.884232 ACACGATACACTTACAGATGGAGTA 59.116 40.000 0.00 0.00 0.00 2.59
4620 7452 5.047590 ACAACACGATACACTTACAGATGGA 60.048 40.000 0.00 0.00 0.00 3.41
4621 7453 5.168569 ACAACACGATACACTTACAGATGG 58.831 41.667 0.00 0.00 0.00 3.51
4623 7455 7.768240 TGATACAACACGATACACTTACAGAT 58.232 34.615 0.00 0.00 0.00 2.90
4625 7457 7.167635 GGATGATACAACACGATACACTTACAG 59.832 40.741 0.00 0.00 0.00 2.74
4626 7458 6.976349 GGATGATACAACACGATACACTTACA 59.024 38.462 0.00 0.00 0.00 2.41
4628 7460 6.183360 ACGGATGATACAACACGATACACTTA 60.183 38.462 0.00 0.00 0.00 2.24
4630 7462 4.097437 ACGGATGATACAACACGATACACT 59.903 41.667 0.00 0.00 0.00 3.55
4631 7463 4.357142 ACGGATGATACAACACGATACAC 58.643 43.478 0.00 0.00 0.00 2.90
4633 7465 5.276678 CCAAACGGATGATACAACACGATAC 60.277 44.000 0.00 0.00 0.00 2.24
4635 7467 3.621268 CCAAACGGATGATACAACACGAT 59.379 43.478 0.00 0.00 0.00 3.73
4636 7468 2.997303 CCAAACGGATGATACAACACGA 59.003 45.455 0.00 0.00 0.00 4.35
4637 7469 2.997303 TCCAAACGGATGATACAACACG 59.003 45.455 0.00 0.00 0.00 4.49
4638 7470 6.861065 ATATCCAAACGGATGATACAACAC 57.139 37.500 4.21 0.00 43.47 3.32
4639 7471 7.873719 AAATATCCAAACGGATGATACAACA 57.126 32.000 4.21 0.00 43.47 3.33
4670 7502 9.961265 GCCTAATAAGTAAATGTAATCAAACCC 57.039 33.333 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.