Multiple sequence alignment - TraesCS7A01G361700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G361700 chr7A 100.000 2345 0 0 1 2345 536497203 536499547 0.000000e+00 4331.0
1 TraesCS7A01G361700 chr7A 87.490 1271 147 10 454 1720 135569216 135570478 0.000000e+00 1456.0
2 TraesCS7A01G361700 chr7A 89.083 1145 114 9 454 1595 126931607 126932743 0.000000e+00 1411.0
3 TraesCS7A01G361700 chr7A 96.099 564 13 1 1791 2345 13439285 13438722 0.000000e+00 911.0
4 TraesCS7A01G361700 chr7A 100.000 43 0 0 1 43 500124521 500124563 1.930000e-11 80.5
5 TraesCS7A01G361700 chr3A 94.704 1265 64 3 457 1720 12803146 12801884 0.000000e+00 1962.0
6 TraesCS7A01G361700 chr3A 98.795 415 5 0 1788 2202 102259752 102260166 0.000000e+00 739.0
7 TraesCS7A01G361700 chr3A 96.639 119 4 0 2227 2345 102260282 102260400 5.110000e-47 198.0
8 TraesCS7A01G361700 chr1A 93.806 1114 63 2 613 1720 10177557 10176444 0.000000e+00 1670.0
9 TraesCS7A01G361700 chr1A 90.600 1266 110 8 457 1720 45267619 45266361 0.000000e+00 1670.0
10 TraesCS7A01G361700 chr1A 95.745 564 15 1 1791 2345 564208357 564207794 0.000000e+00 900.0
11 TraesCS7A01G361700 chr1A 82.679 560 77 15 1791 2345 6455592 6455048 1.630000e-131 479.0
12 TraesCS7A01G361700 chr1A 95.833 48 2 0 1 48 118079064 118079017 6.950000e-11 78.7
13 TraesCS7A01G361700 chr4B 90.230 1259 119 4 463 1720 8624468 8623213 0.000000e+00 1640.0
14 TraesCS7A01G361700 chr4B 97.122 556 14 2 1791 2345 529331995 529331441 0.000000e+00 937.0
15 TraesCS7A01G361700 chr6A 93.659 1104 55 4 613 1701 29955441 29956544 0.000000e+00 1637.0
16 TraesCS7A01G361700 chr2B 89.470 1263 118 11 463 1720 592768367 592767115 0.000000e+00 1581.0
17 TraesCS7A01G361700 chr2B 97.297 555 15 0 1791 2345 8332345 8331791 0.000000e+00 942.0
18 TraesCS7A01G361700 chr2B 100.000 45 0 0 2 46 139937028 139936984 1.490000e-12 84.2
19 TraesCS7A01G361700 chr6D 84.676 1279 177 15 457 1725 341639174 341637905 0.000000e+00 1258.0
20 TraesCS7A01G361700 chr6B 98.566 558 8 0 1788 2345 25983826 25984383 0.000000e+00 987.0
21 TraesCS7A01G361700 chr2A 92.832 558 40 0 1788 2345 743554197 743554754 0.000000e+00 809.0
22 TraesCS7A01G361700 chr2A 92.129 559 43 1 1787 2345 5286570 5286013 0.000000e+00 787.0
23 TraesCS7A01G361700 chr2A 90.270 555 44 2 1791 2345 696103 695559 0.000000e+00 717.0
24 TraesCS7A01G361700 chr2A 97.872 47 1 0 1 47 75303651 75303697 5.370000e-12 82.4
25 TraesCS7A01G361700 chr2A 100.000 44 0 0 1 44 590988141 590988098 5.370000e-12 82.4
26 TraesCS7A01G361700 chr7B 82.857 350 49 6 47 387 487332366 487332713 1.050000e-78 303.0
27 TraesCS7A01G361700 chr7D 79.420 379 51 17 96 455 463955976 463955606 2.330000e-60 243.0
28 TraesCS7A01G361700 chr5A 97.872 47 1 0 1 47 689728221 689728175 5.370000e-12 82.4
29 TraesCS7A01G361700 chr4D 97.826 46 1 0 1 46 501182375 501182330 1.930000e-11 80.5
30 TraesCS7A01G361700 chr1D 97.826 46 1 0 1 46 70351563 70351518 1.930000e-11 80.5
31 TraesCS7A01G361700 chr1D 100.000 43 0 0 1 43 366259300 366259258 1.930000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G361700 chr7A 536497203 536499547 2344 False 4331.0 4331 100.000 1 2345 1 chr7A.!!$F4 2344
1 TraesCS7A01G361700 chr7A 135569216 135570478 1262 False 1456.0 1456 87.490 454 1720 1 chr7A.!!$F2 1266
2 TraesCS7A01G361700 chr7A 126931607 126932743 1136 False 1411.0 1411 89.083 454 1595 1 chr7A.!!$F1 1141
3 TraesCS7A01G361700 chr7A 13438722 13439285 563 True 911.0 911 96.099 1791 2345 1 chr7A.!!$R1 554
4 TraesCS7A01G361700 chr3A 12801884 12803146 1262 True 1962.0 1962 94.704 457 1720 1 chr3A.!!$R1 1263
5 TraesCS7A01G361700 chr3A 102259752 102260400 648 False 468.5 739 97.717 1788 2345 2 chr3A.!!$F1 557
6 TraesCS7A01G361700 chr1A 10176444 10177557 1113 True 1670.0 1670 93.806 613 1720 1 chr1A.!!$R2 1107
7 TraesCS7A01G361700 chr1A 45266361 45267619 1258 True 1670.0 1670 90.600 457 1720 1 chr1A.!!$R3 1263
8 TraesCS7A01G361700 chr1A 564207794 564208357 563 True 900.0 900 95.745 1791 2345 1 chr1A.!!$R5 554
9 TraesCS7A01G361700 chr1A 6455048 6455592 544 True 479.0 479 82.679 1791 2345 1 chr1A.!!$R1 554
10 TraesCS7A01G361700 chr4B 8623213 8624468 1255 True 1640.0 1640 90.230 463 1720 1 chr4B.!!$R1 1257
11 TraesCS7A01G361700 chr4B 529331441 529331995 554 True 937.0 937 97.122 1791 2345 1 chr4B.!!$R2 554
12 TraesCS7A01G361700 chr6A 29955441 29956544 1103 False 1637.0 1637 93.659 613 1701 1 chr6A.!!$F1 1088
13 TraesCS7A01G361700 chr2B 592767115 592768367 1252 True 1581.0 1581 89.470 463 1720 1 chr2B.!!$R3 1257
14 TraesCS7A01G361700 chr2B 8331791 8332345 554 True 942.0 942 97.297 1791 2345 1 chr2B.!!$R1 554
15 TraesCS7A01G361700 chr6D 341637905 341639174 1269 True 1258.0 1258 84.676 457 1725 1 chr6D.!!$R1 1268
16 TraesCS7A01G361700 chr6B 25983826 25984383 557 False 987.0 987 98.566 1788 2345 1 chr6B.!!$F1 557
17 TraesCS7A01G361700 chr2A 743554197 743554754 557 False 809.0 809 92.832 1788 2345 1 chr2A.!!$F2 557
18 TraesCS7A01G361700 chr2A 5286013 5286570 557 True 787.0 787 92.129 1787 2345 1 chr2A.!!$R2 558
19 TraesCS7A01G361700 chr2A 695559 696103 544 True 717.0 717 90.270 1791 2345 1 chr2A.!!$R1 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 331 0.036765 TACCACTCCGGCACATTGAC 60.037 55.0 0.0 0.0 39.03 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1770 1797 0.110147 GTCGGCATATCTCTCCGTCG 60.11 60.0 0.0 0.0 43.35 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.616935 CGACTAATCGTTGCGAGGA 57.383 52.632 0.00 0.00 43.66 3.71
22 23 1.467875 CGACTAATCGTTGCGAGGAG 58.532 55.000 2.32 0.00 43.66 3.69
23 24 2.441780 CGACTAATCGTTGCGAGGAGC 61.442 57.143 2.32 0.00 43.66 4.70
38 39 1.576356 GGAGCGCTCCTCAATTAGTG 58.424 55.000 42.50 0.00 46.16 2.74
39 40 1.137086 GGAGCGCTCCTCAATTAGTGA 59.863 52.381 42.50 0.00 46.16 3.41
40 41 2.224161 GGAGCGCTCCTCAATTAGTGAT 60.224 50.000 42.50 1.02 46.16 3.06
41 42 3.462021 GAGCGCTCCTCAATTAGTGATT 58.538 45.455 27.22 0.00 40.45 2.57
42 43 3.873952 GAGCGCTCCTCAATTAGTGATTT 59.126 43.478 27.22 0.00 40.45 2.17
43 44 4.265073 AGCGCTCCTCAATTAGTGATTTT 58.735 39.130 2.64 0.00 35.07 1.82
44 45 4.095483 AGCGCTCCTCAATTAGTGATTTTG 59.905 41.667 2.64 0.00 35.07 2.44
45 46 4.142600 GCGCTCCTCAATTAGTGATTTTGT 60.143 41.667 0.00 0.00 35.07 2.83
46 47 5.064707 GCGCTCCTCAATTAGTGATTTTGTA 59.935 40.000 0.00 0.00 35.07 2.41
47 48 6.403200 GCGCTCCTCAATTAGTGATTTTGTAA 60.403 38.462 0.00 0.00 35.07 2.41
48 49 7.182761 CGCTCCTCAATTAGTGATTTTGTAAG 58.817 38.462 0.00 0.00 35.07 2.34
49 50 7.064609 CGCTCCTCAATTAGTGATTTTGTAAGA 59.935 37.037 0.00 0.00 35.07 2.10
50 51 8.730680 GCTCCTCAATTAGTGATTTTGTAAGAA 58.269 33.333 0.00 0.00 35.07 2.52
57 58 8.794335 ATTAGTGATTTTGTAAGAAGAGGACC 57.206 34.615 0.00 0.00 0.00 4.46
58 59 6.187727 AGTGATTTTGTAAGAAGAGGACCA 57.812 37.500 0.00 0.00 0.00 4.02
59 60 5.998363 AGTGATTTTGTAAGAAGAGGACCAC 59.002 40.000 0.00 0.00 0.00 4.16
60 61 4.994852 TGATTTTGTAAGAAGAGGACCACG 59.005 41.667 0.00 0.00 0.00 4.94
61 62 2.450609 TTGTAAGAAGAGGACCACGC 57.549 50.000 0.00 0.00 0.00 5.34
62 63 1.629043 TGTAAGAAGAGGACCACGCT 58.371 50.000 0.00 0.00 0.00 5.07
63 64 1.968493 TGTAAGAAGAGGACCACGCTT 59.032 47.619 0.00 0.00 42.20 4.68
64 65 2.288825 TGTAAGAAGAGGACCACGCTTG 60.289 50.000 9.26 0.00 39.44 4.01
65 66 0.603975 AAGAAGAGGACCACGCTTGC 60.604 55.000 0.00 0.00 39.44 4.01
66 67 1.004440 GAAGAGGACCACGCTTGCT 60.004 57.895 0.00 0.00 39.44 3.91
67 68 1.294659 GAAGAGGACCACGCTTGCTG 61.295 60.000 0.00 0.00 39.44 4.41
68 69 2.738213 AAGAGGACCACGCTTGCTGG 62.738 60.000 0.00 8.72 37.84 4.85
69 70 4.335647 AGGACCACGCTTGCTGGG 62.336 66.667 12.94 6.87 32.45 4.45
70 71 4.643387 GGACCACGCTTGCTGGGT 62.643 66.667 12.94 9.45 42.91 4.51
75 76 2.591715 ACGCTTGCTGGGTGACAC 60.592 61.111 0.00 0.00 40.49 3.67
76 77 3.357079 CGCTTGCTGGGTGACACC 61.357 66.667 16.86 16.86 37.60 4.16
86 87 3.403936 GGTGACACCCTATCATGGC 57.596 57.895 14.16 0.00 30.04 4.40
87 88 0.179018 GGTGACACCCTATCATGGCC 60.179 60.000 14.16 0.00 30.04 5.36
88 89 0.532862 GTGACACCCTATCATGGCCG 60.533 60.000 0.00 0.00 0.00 6.13
89 90 0.980754 TGACACCCTATCATGGCCGT 60.981 55.000 0.00 0.00 0.00 5.68
90 91 1.045407 GACACCCTATCATGGCCGTA 58.955 55.000 0.00 0.00 0.00 4.02
91 92 1.623811 GACACCCTATCATGGCCGTAT 59.376 52.381 0.00 0.00 0.00 3.06
92 93 1.347707 ACACCCTATCATGGCCGTATG 59.652 52.381 0.00 0.00 0.00 2.39
93 94 1.347707 CACCCTATCATGGCCGTATGT 59.652 52.381 0.00 0.00 0.00 2.29
94 95 2.054799 ACCCTATCATGGCCGTATGTT 58.945 47.619 0.00 0.00 0.00 2.71
95 96 2.224523 ACCCTATCATGGCCGTATGTTG 60.225 50.000 0.00 0.00 0.00 3.33
96 97 1.806542 CCTATCATGGCCGTATGTTGC 59.193 52.381 0.00 0.00 0.00 4.17
97 98 2.550855 CCTATCATGGCCGTATGTTGCT 60.551 50.000 0.00 0.00 0.00 3.91
98 99 1.311859 ATCATGGCCGTATGTTGCTG 58.688 50.000 0.00 0.00 0.00 4.41
99 100 1.064621 CATGGCCGTATGTTGCTGC 59.935 57.895 0.00 0.00 0.00 5.25
100 101 1.378382 ATGGCCGTATGTTGCTGCA 60.378 52.632 0.00 0.00 0.00 4.41
101 102 0.964860 ATGGCCGTATGTTGCTGCAA 60.965 50.000 11.69 11.69 0.00 4.08
102 103 0.964860 TGGCCGTATGTTGCTGCAAT 60.965 50.000 19.11 6.02 0.00 3.56
103 104 1.021202 GGCCGTATGTTGCTGCAATA 58.979 50.000 19.11 16.54 0.00 1.90
104 105 1.608590 GGCCGTATGTTGCTGCAATAT 59.391 47.619 24.52 24.52 0.00 1.28
105 106 2.605338 GGCCGTATGTTGCTGCAATATG 60.605 50.000 27.89 17.75 0.00 1.78
106 107 2.653890 CCGTATGTTGCTGCAATATGC 58.346 47.619 27.89 25.51 45.29 3.14
108 109 2.032979 CGTATGTTGCTGCAATATGCGA 60.033 45.455 38.34 18.73 46.73 5.10
109 110 3.545822 CGTATGTTGCTGCAATATGCGAA 60.546 43.478 38.34 18.43 46.73 4.70
110 111 5.017653 CGTATGTTGCTGCAATATGCGAAA 61.018 41.667 38.34 18.13 46.73 3.46
111 112 6.453204 CGTATGTTGCTGCAATATGCGAAAA 61.453 40.000 38.34 17.54 46.73 2.29
112 113 8.162075 CGTATGTTGCTGCAATATGCGAAAAG 62.162 42.308 38.34 20.39 46.73 2.27
120 121 5.820926 GCAATATGCGAAAAGACAAAACA 57.179 34.783 0.00 0.00 31.71 2.83
121 122 6.209129 GCAATATGCGAAAAGACAAAACAA 57.791 33.333 0.00 0.00 31.71 2.83
122 123 6.820459 GCAATATGCGAAAAGACAAAACAAT 58.180 32.000 0.00 0.00 31.71 2.71
123 124 7.948137 GCAATATGCGAAAAGACAAAACAATA 58.052 30.769 0.00 0.00 31.71 1.90
124 125 8.103924 GCAATATGCGAAAAGACAAAACAATAG 58.896 33.333 0.00 0.00 31.71 1.73
125 126 8.586273 CAATATGCGAAAAGACAAAACAATAGG 58.414 33.333 0.00 0.00 0.00 2.57
126 127 5.508200 TGCGAAAAGACAAAACAATAGGT 57.492 34.783 0.00 0.00 0.00 3.08
127 128 6.621316 TGCGAAAAGACAAAACAATAGGTA 57.379 33.333 0.00 0.00 0.00 3.08
128 129 7.028926 TGCGAAAAGACAAAACAATAGGTAA 57.971 32.000 0.00 0.00 0.00 2.85
129 130 7.481642 TGCGAAAAGACAAAACAATAGGTAAA 58.518 30.769 0.00 0.00 0.00 2.01
130 131 7.646130 TGCGAAAAGACAAAACAATAGGTAAAG 59.354 33.333 0.00 0.00 0.00 1.85
131 132 7.114388 GCGAAAAGACAAAACAATAGGTAAAGG 59.886 37.037 0.00 0.00 0.00 3.11
132 133 8.347035 CGAAAAGACAAAACAATAGGTAAAGGA 58.653 33.333 0.00 0.00 0.00 3.36
133 134 9.459640 GAAAAGACAAAACAATAGGTAAAGGAC 57.540 33.333 0.00 0.00 0.00 3.85
134 135 6.796705 AGACAAAACAATAGGTAAAGGACG 57.203 37.500 0.00 0.00 0.00 4.79
135 136 6.293698 AGACAAAACAATAGGTAAAGGACGT 58.706 36.000 0.00 0.00 0.00 4.34
136 137 6.204108 AGACAAAACAATAGGTAAAGGACGTG 59.796 38.462 0.00 0.00 0.00 4.49
137 138 6.056884 ACAAAACAATAGGTAAAGGACGTGA 58.943 36.000 0.00 0.00 0.00 4.35
138 139 6.713450 ACAAAACAATAGGTAAAGGACGTGAT 59.287 34.615 0.00 0.00 0.00 3.06
139 140 7.879160 ACAAAACAATAGGTAAAGGACGTGATA 59.121 33.333 0.00 0.00 0.00 2.15
140 141 8.723311 CAAAACAATAGGTAAAGGACGTGATAA 58.277 33.333 0.00 0.00 0.00 1.75
141 142 9.457436 AAAACAATAGGTAAAGGACGTGATAAT 57.543 29.630 0.00 0.00 0.00 1.28
142 143 8.433421 AACAATAGGTAAAGGACGTGATAATG 57.567 34.615 0.00 0.00 0.00 1.90
143 144 6.990349 ACAATAGGTAAAGGACGTGATAATGG 59.010 38.462 0.00 0.00 0.00 3.16
144 145 6.989155 ATAGGTAAAGGACGTGATAATGGA 57.011 37.500 0.00 0.00 0.00 3.41
145 146 5.277857 AGGTAAAGGACGTGATAATGGAG 57.722 43.478 0.00 0.00 0.00 3.86
146 147 4.101119 AGGTAAAGGACGTGATAATGGAGG 59.899 45.833 0.00 0.00 0.00 4.30
147 148 4.141779 GGTAAAGGACGTGATAATGGAGGT 60.142 45.833 0.00 0.00 0.00 3.85
148 149 5.069516 GGTAAAGGACGTGATAATGGAGGTA 59.930 44.000 0.00 0.00 0.00 3.08
149 150 4.667519 AAGGACGTGATAATGGAGGTAC 57.332 45.455 0.00 0.00 0.00 3.34
151 152 4.287552 AGGACGTGATAATGGAGGTACTT 58.712 43.478 0.00 0.00 41.55 2.24
152 153 4.715297 AGGACGTGATAATGGAGGTACTTT 59.285 41.667 0.00 0.00 41.55 2.66
153 154 5.189145 AGGACGTGATAATGGAGGTACTTTT 59.811 40.000 0.00 0.00 41.55 2.27
154 155 5.293569 GGACGTGATAATGGAGGTACTTTTG 59.706 44.000 0.00 0.00 41.55 2.44
155 156 4.634443 ACGTGATAATGGAGGTACTTTTGC 59.366 41.667 0.00 0.00 41.55 3.68
156 157 4.260212 CGTGATAATGGAGGTACTTTTGCG 60.260 45.833 0.00 0.00 41.55 4.85
157 158 4.873827 GTGATAATGGAGGTACTTTTGCGA 59.126 41.667 0.00 0.00 41.55 5.10
158 159 5.353123 GTGATAATGGAGGTACTTTTGCGAA 59.647 40.000 0.00 0.00 41.55 4.70
159 160 5.941058 TGATAATGGAGGTACTTTTGCGAAA 59.059 36.000 0.00 0.00 41.55 3.46
160 161 4.499037 AATGGAGGTACTTTTGCGAAAC 57.501 40.909 0.00 0.00 41.55 2.78
161 162 1.868498 TGGAGGTACTTTTGCGAAACG 59.132 47.619 0.00 0.00 41.55 3.60
162 163 2.137523 GGAGGTACTTTTGCGAAACGA 58.862 47.619 0.00 0.00 41.55 3.85
163 164 2.157085 GGAGGTACTTTTGCGAAACGAG 59.843 50.000 0.00 0.00 41.55 4.18
164 165 2.140717 AGGTACTTTTGCGAAACGAGG 58.859 47.619 0.00 0.00 27.25 4.63
165 166 1.196127 GGTACTTTTGCGAAACGAGGG 59.804 52.381 0.00 0.00 0.00 4.30
166 167 0.869730 TACTTTTGCGAAACGAGGGC 59.130 50.000 0.00 0.00 0.00 5.19
167 168 1.440353 CTTTTGCGAAACGAGGGCG 60.440 57.895 0.00 0.00 44.79 6.13
168 169 1.837538 CTTTTGCGAAACGAGGGCGA 61.838 55.000 0.00 0.00 41.64 5.54
169 170 1.437772 TTTTGCGAAACGAGGGCGAA 61.438 50.000 0.00 0.00 41.64 4.70
170 171 1.437772 TTTGCGAAACGAGGGCGAAA 61.438 50.000 0.00 0.00 41.64 3.46
171 172 1.231958 TTGCGAAACGAGGGCGAAAT 61.232 50.000 0.00 0.00 41.64 2.17
172 173 1.226018 GCGAAACGAGGGCGAAATG 60.226 57.895 0.00 0.00 41.64 2.32
173 174 1.226018 CGAAACGAGGGCGAAATGC 60.226 57.895 0.00 0.00 45.38 3.56
192 193 2.355197 GCAAAAACTGCCACCTTTTGT 58.645 42.857 7.96 0.00 46.13 2.83
193 194 2.746904 GCAAAAACTGCCACCTTTTGTT 59.253 40.909 7.96 0.00 46.13 2.83
194 195 3.190327 GCAAAAACTGCCACCTTTTGTTT 59.810 39.130 7.96 0.00 46.13 2.83
195 196 4.320861 GCAAAAACTGCCACCTTTTGTTTT 60.321 37.500 7.96 0.00 46.13 2.43
196 197 5.767269 CAAAAACTGCCACCTTTTGTTTTT 58.233 33.333 0.00 0.00 45.58 1.94
214 215 3.992260 TTTTCGGGCGAAAATCTTTGA 57.008 38.095 0.40 0.00 45.59 2.69
215 216 3.992260 TTTCGGGCGAAAATCTTTGAA 57.008 38.095 0.00 0.00 40.63 2.69
216 217 4.513198 TTTCGGGCGAAAATCTTTGAAT 57.487 36.364 0.00 0.00 40.63 2.57
217 218 3.485947 TCGGGCGAAAATCTTTGAATG 57.514 42.857 0.00 0.00 0.00 2.67
218 219 1.919918 CGGGCGAAAATCTTTGAATGC 59.080 47.619 0.00 0.00 0.00 3.56
219 220 2.670789 CGGGCGAAAATCTTTGAATGCA 60.671 45.455 0.00 0.00 0.00 3.96
220 221 3.324993 GGGCGAAAATCTTTGAATGCAA 58.675 40.909 0.00 0.00 0.00 4.08
221 222 3.123453 GGGCGAAAATCTTTGAATGCAAC 59.877 43.478 0.00 0.00 32.79 4.17
222 223 3.181541 GGCGAAAATCTTTGAATGCAACG 60.182 43.478 0.00 0.00 32.79 4.10
223 224 3.718898 GCGAAAATCTTTGAATGCAACGC 60.719 43.478 0.00 0.00 34.21 4.84
224 225 3.670055 CGAAAATCTTTGAATGCAACGCT 59.330 39.130 0.00 0.00 32.79 5.07
225 226 4.851014 CGAAAATCTTTGAATGCAACGCTA 59.149 37.500 0.00 0.00 32.79 4.26
226 227 5.512788 CGAAAATCTTTGAATGCAACGCTAT 59.487 36.000 0.00 0.00 32.79 2.97
227 228 6.033831 CGAAAATCTTTGAATGCAACGCTATT 59.966 34.615 0.00 0.00 32.79 1.73
228 229 7.410728 CGAAAATCTTTGAATGCAACGCTATTT 60.411 33.333 0.00 0.00 32.79 1.40
229 230 6.875926 AATCTTTGAATGCAACGCTATTTC 57.124 33.333 0.00 0.00 32.79 2.17
230 231 5.627499 TCTTTGAATGCAACGCTATTTCT 57.373 34.783 0.00 0.00 32.79 2.52
231 232 6.012658 TCTTTGAATGCAACGCTATTTCTT 57.987 33.333 0.00 0.00 32.79 2.52
232 233 6.446318 TCTTTGAATGCAACGCTATTTCTTT 58.554 32.000 0.00 0.00 32.79 2.52
233 234 6.922957 TCTTTGAATGCAACGCTATTTCTTTT 59.077 30.769 0.00 0.00 32.79 2.27
234 235 8.079203 TCTTTGAATGCAACGCTATTTCTTTTA 58.921 29.630 0.00 0.00 32.79 1.52
235 236 7.561237 TTGAATGCAACGCTATTTCTTTTAC 57.439 32.000 0.00 0.00 0.00 2.01
236 237 6.673106 TGAATGCAACGCTATTTCTTTTACA 58.327 32.000 0.00 0.00 0.00 2.41
237 238 6.801377 TGAATGCAACGCTATTTCTTTTACAG 59.199 34.615 0.00 0.00 0.00 2.74
238 239 5.933187 TGCAACGCTATTTCTTTTACAGA 57.067 34.783 0.00 0.00 0.00 3.41
239 240 6.307031 TGCAACGCTATTTCTTTTACAGAA 57.693 33.333 0.00 0.00 39.99 3.02
240 241 6.908825 TGCAACGCTATTTCTTTTACAGAAT 58.091 32.000 0.00 0.00 41.42 2.40
241 242 6.801377 TGCAACGCTATTTCTTTTACAGAATG 59.199 34.615 0.00 0.00 41.42 2.67
242 243 6.237306 GCAACGCTATTTCTTTTACAGAATGC 60.237 38.462 0.00 0.00 41.42 3.56
243 244 6.494893 ACGCTATTTCTTTTACAGAATGCA 57.505 33.333 0.00 0.00 41.42 3.96
244 245 7.088589 ACGCTATTTCTTTTACAGAATGCAT 57.911 32.000 0.00 0.00 41.42 3.96
245 246 7.538575 ACGCTATTTCTTTTACAGAATGCATT 58.461 30.769 12.83 12.83 41.42 3.56
246 247 7.485913 ACGCTATTTCTTTTACAGAATGCATTG 59.514 33.333 18.59 6.76 41.42 2.82
247 248 7.697710 CGCTATTTCTTTTACAGAATGCATTGA 59.302 33.333 18.59 1.92 41.42 2.57
248 249 9.525409 GCTATTTCTTTTACAGAATGCATTGAT 57.475 29.630 18.59 1.84 41.42 2.57
251 252 8.746922 TTTCTTTTACAGAATGCATTGATCAC 57.253 30.769 18.59 1.32 41.42 3.06
252 253 6.855836 TCTTTTACAGAATGCATTGATCACC 58.144 36.000 18.59 0.51 42.53 4.02
253 254 6.660521 TCTTTTACAGAATGCATTGATCACCT 59.339 34.615 18.59 3.22 42.53 4.00
254 255 5.823209 TTACAGAATGCATTGATCACCTG 57.177 39.130 18.59 17.86 42.53 4.00
255 256 2.426024 ACAGAATGCATTGATCACCTGC 59.574 45.455 18.59 18.34 42.53 4.85
256 257 2.688446 CAGAATGCATTGATCACCTGCT 59.312 45.455 18.59 0.81 36.84 4.24
257 258 3.130516 CAGAATGCATTGATCACCTGCTT 59.869 43.478 18.59 16.91 36.84 3.91
258 259 4.337274 CAGAATGCATTGATCACCTGCTTA 59.663 41.667 18.59 10.14 36.84 3.09
259 260 4.951715 AGAATGCATTGATCACCTGCTTAA 59.048 37.500 18.59 9.58 36.84 1.85
260 261 4.644103 ATGCATTGATCACCTGCTTAAC 57.356 40.909 23.07 2.88 36.84 2.01
261 262 2.754552 TGCATTGATCACCTGCTTAACC 59.245 45.455 23.07 2.33 36.84 2.85
262 263 2.099756 GCATTGATCACCTGCTTAACCC 59.900 50.000 18.03 0.00 33.15 4.11
263 264 3.355378 CATTGATCACCTGCTTAACCCA 58.645 45.455 0.00 0.00 0.00 4.51
264 265 2.787473 TGATCACCTGCTTAACCCAG 57.213 50.000 0.00 0.00 0.00 4.45
265 266 2.265367 TGATCACCTGCTTAACCCAGA 58.735 47.619 0.00 0.00 32.03 3.86
266 267 2.846206 TGATCACCTGCTTAACCCAGAT 59.154 45.455 0.00 0.00 32.03 2.90
267 268 3.266772 TGATCACCTGCTTAACCCAGATT 59.733 43.478 0.00 0.00 32.03 2.40
268 269 4.473196 TGATCACCTGCTTAACCCAGATTA 59.527 41.667 0.00 0.00 32.03 1.75
269 270 5.132648 TGATCACCTGCTTAACCCAGATTAT 59.867 40.000 0.00 0.00 32.03 1.28
270 271 4.780815 TCACCTGCTTAACCCAGATTATG 58.219 43.478 0.97 0.00 32.03 1.90
271 272 4.473196 TCACCTGCTTAACCCAGATTATGA 59.527 41.667 0.97 0.00 32.03 2.15
272 273 5.132648 TCACCTGCTTAACCCAGATTATGAT 59.867 40.000 0.97 0.00 32.03 2.45
273 274 6.328934 TCACCTGCTTAACCCAGATTATGATA 59.671 38.462 0.97 0.00 32.03 2.15
274 275 6.652481 CACCTGCTTAACCCAGATTATGATAG 59.348 42.308 0.97 0.00 32.03 2.08
275 276 5.645497 CCTGCTTAACCCAGATTATGATAGC 59.355 44.000 0.00 0.00 32.03 2.97
276 277 6.439636 TGCTTAACCCAGATTATGATAGCT 57.560 37.500 0.00 0.00 0.00 3.32
277 278 6.841601 TGCTTAACCCAGATTATGATAGCTT 58.158 36.000 0.00 0.00 0.00 3.74
278 279 6.712095 TGCTTAACCCAGATTATGATAGCTTG 59.288 38.462 0.00 0.00 0.00 4.01
279 280 6.150140 GCTTAACCCAGATTATGATAGCTTGG 59.850 42.308 0.00 0.00 0.00 3.61
280 281 4.647564 ACCCAGATTATGATAGCTTGGG 57.352 45.455 11.93 11.93 39.78 4.12
281 282 3.245052 ACCCAGATTATGATAGCTTGGGC 60.245 47.826 13.19 0.00 37.57 5.36
282 283 3.350833 CCAGATTATGATAGCTTGGGCC 58.649 50.000 0.00 0.00 39.73 5.80
283 284 3.009916 CCAGATTATGATAGCTTGGGCCT 59.990 47.826 4.53 0.00 39.73 5.19
284 285 4.008330 CAGATTATGATAGCTTGGGCCTG 58.992 47.826 4.53 0.00 39.73 4.85
285 286 2.276732 TTATGATAGCTTGGGCCTGC 57.723 50.000 4.53 9.68 39.73 4.85
286 287 0.401738 TATGATAGCTTGGGCCTGCC 59.598 55.000 16.21 0.00 39.73 4.85
287 288 1.358830 ATGATAGCTTGGGCCTGCCT 61.359 55.000 16.21 6.98 39.73 4.75
288 289 1.527844 GATAGCTTGGGCCTGCCTG 60.528 63.158 16.21 0.46 39.73 4.85
289 290 2.276309 GATAGCTTGGGCCTGCCTGT 62.276 60.000 16.21 3.20 39.73 4.00
290 291 2.276309 ATAGCTTGGGCCTGCCTGTC 62.276 60.000 16.21 0.00 39.73 3.51
291 292 4.666253 GCTTGGGCCTGCCTGTCA 62.666 66.667 4.53 0.00 36.10 3.58
292 293 2.360852 CTTGGGCCTGCCTGTCAG 60.361 66.667 4.53 0.00 42.49 3.51
302 303 4.631773 CCTGTCAGGCTGATGTGG 57.368 61.111 21.84 17.93 0.00 4.17
303 304 1.748122 CCTGTCAGGCTGATGTGGC 60.748 63.158 21.84 7.82 0.00 5.01
304 305 1.002990 CTGTCAGGCTGATGTGGCA 60.003 57.895 21.84 12.28 34.73 4.92
305 306 0.607217 CTGTCAGGCTGATGTGGCAA 60.607 55.000 21.84 0.00 34.73 4.52
306 307 0.178995 TGTCAGGCTGATGTGGCAAA 60.179 50.000 21.84 0.00 34.73 3.68
307 308 0.961019 GTCAGGCTGATGTGGCAAAA 59.039 50.000 21.84 0.00 34.73 2.44
308 309 1.340889 GTCAGGCTGATGTGGCAAAAA 59.659 47.619 21.84 0.00 34.73 1.94
325 326 2.279935 AAAAATACCACTCCGGCACA 57.720 45.000 0.00 0.00 39.03 4.57
326 327 2.507407 AAAATACCACTCCGGCACAT 57.493 45.000 0.00 0.00 39.03 3.21
327 328 2.507407 AAATACCACTCCGGCACATT 57.493 45.000 0.00 0.00 39.03 2.71
328 329 1.750193 AATACCACTCCGGCACATTG 58.250 50.000 0.00 0.00 39.03 2.82
329 330 0.908910 ATACCACTCCGGCACATTGA 59.091 50.000 0.00 0.00 39.03 2.57
330 331 0.036765 TACCACTCCGGCACATTGAC 60.037 55.000 0.00 0.00 39.03 3.18
331 332 1.003355 CCACTCCGGCACATTGACT 60.003 57.895 0.00 0.00 0.00 3.41
332 333 0.606401 CCACTCCGGCACATTGACTT 60.606 55.000 0.00 0.00 0.00 3.01
333 334 0.518636 CACTCCGGCACATTGACTTG 59.481 55.000 0.00 0.00 0.00 3.16
334 335 0.606401 ACTCCGGCACATTGACTTGG 60.606 55.000 0.00 0.00 0.00 3.61
335 336 0.606401 CTCCGGCACATTGACTTGGT 60.606 55.000 0.00 0.00 0.00 3.67
336 337 0.605319 TCCGGCACATTGACTTGGTC 60.605 55.000 0.00 0.00 0.00 4.02
337 338 0.606401 CCGGCACATTGACTTGGTCT 60.606 55.000 0.00 0.00 33.15 3.85
338 339 1.238439 CGGCACATTGACTTGGTCTT 58.762 50.000 0.00 0.00 33.15 3.01
339 340 1.197721 CGGCACATTGACTTGGTCTTC 59.802 52.381 0.00 0.00 33.15 2.87
340 341 1.541588 GGCACATTGACTTGGTCTTCC 59.458 52.381 0.00 0.00 33.15 3.46
341 342 2.508526 GCACATTGACTTGGTCTTCCT 58.491 47.619 0.00 0.00 33.15 3.36
342 343 2.485814 GCACATTGACTTGGTCTTCCTC 59.514 50.000 0.00 0.00 33.15 3.71
343 344 3.743521 CACATTGACTTGGTCTTCCTCA 58.256 45.455 0.00 0.00 33.15 3.86
344 345 4.330250 CACATTGACTTGGTCTTCCTCAT 58.670 43.478 0.00 0.00 33.15 2.90
345 346 5.491070 CACATTGACTTGGTCTTCCTCATA 58.509 41.667 0.00 0.00 33.15 2.15
346 347 5.939883 CACATTGACTTGGTCTTCCTCATAA 59.060 40.000 0.00 0.00 33.15 1.90
347 348 6.600822 CACATTGACTTGGTCTTCCTCATAAT 59.399 38.462 0.00 0.00 33.15 1.28
348 349 6.825721 ACATTGACTTGGTCTTCCTCATAATC 59.174 38.462 0.00 0.00 33.15 1.75
349 350 6.627087 TTGACTTGGTCTTCCTCATAATCT 57.373 37.500 0.00 0.00 33.15 2.40
350 351 7.733773 TTGACTTGGTCTTCCTCATAATCTA 57.266 36.000 0.00 0.00 33.15 1.98
351 352 7.353414 TGACTTGGTCTTCCTCATAATCTAG 57.647 40.000 0.00 0.00 33.15 2.43
352 353 6.325028 TGACTTGGTCTTCCTCATAATCTAGG 59.675 42.308 0.00 0.00 33.15 3.02
353 354 6.206042 ACTTGGTCTTCCTCATAATCTAGGT 58.794 40.000 0.00 0.00 34.30 3.08
354 355 6.325286 ACTTGGTCTTCCTCATAATCTAGGTC 59.675 42.308 0.00 0.00 34.30 3.85
355 356 5.777449 TGGTCTTCCTCATAATCTAGGTCA 58.223 41.667 0.00 0.00 34.30 4.02
356 357 6.202331 TGGTCTTCCTCATAATCTAGGTCAA 58.798 40.000 0.00 0.00 34.30 3.18
357 358 6.325028 TGGTCTTCCTCATAATCTAGGTCAAG 59.675 42.308 0.00 0.00 34.30 3.02
358 359 6.325286 GGTCTTCCTCATAATCTAGGTCAAGT 59.675 42.308 0.00 0.00 34.30 3.16
359 360 7.206687 GTCTTCCTCATAATCTAGGTCAAGTG 58.793 42.308 0.00 0.00 34.30 3.16
360 361 7.068839 GTCTTCCTCATAATCTAGGTCAAGTGA 59.931 40.741 0.00 0.00 34.30 3.41
361 362 6.968263 TCCTCATAATCTAGGTCAAGTGAG 57.032 41.667 0.00 0.00 34.30 3.51
362 363 5.303078 TCCTCATAATCTAGGTCAAGTGAGC 59.697 44.000 2.23 2.23 42.47 4.26
371 372 3.959573 GGTCAAGTGAGCTATCAATGC 57.040 47.619 3.27 0.00 37.14 3.56
372 373 3.273434 GGTCAAGTGAGCTATCAATGCA 58.727 45.455 3.27 0.00 37.14 3.96
373 374 3.311871 GGTCAAGTGAGCTATCAATGCAG 59.688 47.826 3.27 0.00 37.14 4.41
374 375 3.937706 GTCAAGTGAGCTATCAATGCAGT 59.062 43.478 0.00 0.00 37.14 4.40
375 376 4.033817 GTCAAGTGAGCTATCAATGCAGTC 59.966 45.833 0.00 0.00 37.14 3.51
376 377 3.900966 AGTGAGCTATCAATGCAGTCA 57.099 42.857 0.00 0.00 37.14 3.41
377 378 3.794717 AGTGAGCTATCAATGCAGTCAG 58.205 45.455 0.00 0.00 37.14 3.51
378 379 3.197333 AGTGAGCTATCAATGCAGTCAGT 59.803 43.478 0.00 0.00 37.14 3.41
379 380 4.403752 AGTGAGCTATCAATGCAGTCAGTA 59.596 41.667 0.00 0.00 37.14 2.74
380 381 5.105187 AGTGAGCTATCAATGCAGTCAGTAA 60.105 40.000 0.00 0.00 37.14 2.24
381 382 5.582269 GTGAGCTATCAATGCAGTCAGTAAA 59.418 40.000 0.00 0.00 37.14 2.01
382 383 6.092670 GTGAGCTATCAATGCAGTCAGTAAAA 59.907 38.462 0.00 0.00 37.14 1.52
383 384 6.654582 TGAGCTATCAATGCAGTCAGTAAAAA 59.345 34.615 0.00 0.00 30.61 1.94
404 405 4.961435 AAATTGTGTTTGCTTTTGGTGG 57.039 36.364 0.00 0.00 0.00 4.61
405 406 2.393271 TTGTGTTTGCTTTTGGTGGG 57.607 45.000 0.00 0.00 0.00 4.61
406 407 1.270907 TGTGTTTGCTTTTGGTGGGT 58.729 45.000 0.00 0.00 0.00 4.51
407 408 1.625818 TGTGTTTGCTTTTGGTGGGTT 59.374 42.857 0.00 0.00 0.00 4.11
408 409 2.039084 TGTGTTTGCTTTTGGTGGGTTT 59.961 40.909 0.00 0.00 0.00 3.27
409 410 3.078097 GTGTTTGCTTTTGGTGGGTTTT 58.922 40.909 0.00 0.00 0.00 2.43
410 411 3.077359 TGTTTGCTTTTGGTGGGTTTTG 58.923 40.909 0.00 0.00 0.00 2.44
411 412 3.078097 GTTTGCTTTTGGTGGGTTTTGT 58.922 40.909 0.00 0.00 0.00 2.83
412 413 4.254492 GTTTGCTTTTGGTGGGTTTTGTA 58.746 39.130 0.00 0.00 0.00 2.41
413 414 4.553330 TTGCTTTTGGTGGGTTTTGTAA 57.447 36.364 0.00 0.00 0.00 2.41
414 415 4.553330 TGCTTTTGGTGGGTTTTGTAAA 57.447 36.364 0.00 0.00 0.00 2.01
415 416 4.906618 TGCTTTTGGTGGGTTTTGTAAAA 58.093 34.783 0.00 0.00 0.00 1.52
416 417 5.313712 TGCTTTTGGTGGGTTTTGTAAAAA 58.686 33.333 0.00 0.00 0.00 1.94
437 438 5.523438 AAAAGGCGGTTTTCTGTTAATGA 57.477 34.783 0.00 0.00 32.54 2.57
438 439 4.499037 AAGGCGGTTTTCTGTTAATGAC 57.501 40.909 0.00 0.00 0.00 3.06
439 440 2.482721 AGGCGGTTTTCTGTTAATGACG 59.517 45.455 0.00 0.00 0.00 4.35
440 441 2.481185 GGCGGTTTTCTGTTAATGACGA 59.519 45.455 0.00 0.00 0.00 4.20
441 442 3.476181 GCGGTTTTCTGTTAATGACGAC 58.524 45.455 0.00 0.00 0.00 4.34
442 443 3.059461 GCGGTTTTCTGTTAATGACGACA 60.059 43.478 0.00 0.00 0.00 4.35
443 444 4.451557 CGGTTTTCTGTTAATGACGACAC 58.548 43.478 0.00 0.00 0.00 3.67
444 445 4.025563 CGGTTTTCTGTTAATGACGACACA 60.026 41.667 0.00 0.00 0.00 3.72
445 446 5.502706 CGGTTTTCTGTTAATGACGACACAA 60.503 40.000 0.00 0.00 0.00 3.33
446 447 6.435428 GGTTTTCTGTTAATGACGACACAAT 58.565 36.000 0.00 0.00 0.00 2.71
447 448 6.915843 GGTTTTCTGTTAATGACGACACAATT 59.084 34.615 0.00 0.00 0.00 2.32
448 449 7.096640 GGTTTTCTGTTAATGACGACACAATTG 60.097 37.037 3.24 3.24 0.00 2.32
449 450 6.612247 TTCTGTTAATGACGACACAATTGT 57.388 33.333 4.92 4.92 39.32 2.71
482 483 2.637165 AGGGAGGAAAGTGACCTTGAT 58.363 47.619 0.00 0.00 37.93 2.57
487 488 4.712337 GGAGGAAAGTGACCTTGATCTCTA 59.288 45.833 0.00 0.00 37.93 2.43
703 705 5.027460 TGGTTACCTCTTGGCAGTTATCTA 58.973 41.667 2.07 0.00 36.63 1.98
713 715 3.130516 TGGCAGTTATCTAACGAGACTGG 59.869 47.826 0.00 0.00 40.96 4.00
782 784 5.471556 TCGGTCTATACACACTTGGAAAA 57.528 39.130 0.00 0.00 0.00 2.29
977 981 3.058293 CAGCATCTTTTCTTTACGTGCCA 60.058 43.478 0.00 0.00 0.00 4.92
1001 1005 1.122019 GCTCGGGTGGTATGGAGGAT 61.122 60.000 0.00 0.00 0.00 3.24
1293 1297 1.196766 AGATGCTCAGGTCCAGTGCA 61.197 55.000 12.69 12.69 39.44 4.57
1379 1385 1.200252 CTTCGGAGCTTCGAGTTCTCA 59.800 52.381 18.18 0.00 40.42 3.27
1467 1475 7.321153 TGTAAGCTTGGTGAAGTTAGACTATC 58.679 38.462 9.86 0.00 0.00 2.08
1475 1483 6.043938 TGGTGAAGTTAGACTATCTTGGGTTT 59.956 38.462 9.98 0.00 0.00 3.27
1489 1497 1.244816 GGGTTTCTTTTGGGGACTCG 58.755 55.000 0.00 0.00 0.00 4.18
1496 1504 1.104577 TTTTGGGGACTCGTTGGTGC 61.105 55.000 0.00 0.00 0.00 5.01
1529 1538 0.944386 GTTGCGTGATCACAGGTGTT 59.056 50.000 24.93 0.00 34.82 3.32
1580 1589 0.610174 ATGACGAGTGCTCATGGTGT 59.390 50.000 0.00 0.00 0.00 4.16
1657 1684 1.142060 TGGTACTTGGGTCTGTGGTTG 59.858 52.381 0.00 0.00 0.00 3.77
1742 1769 9.537192 AAAATATATCAATCAGGCATTGTTGTG 57.463 29.630 0.00 0.00 42.47 3.33
1743 1770 3.880047 ATCAATCAGGCATTGTTGTGG 57.120 42.857 0.00 0.00 42.47 4.17
1744 1771 2.874014 TCAATCAGGCATTGTTGTGGA 58.126 42.857 0.00 0.00 42.47 4.02
1745 1772 3.229293 TCAATCAGGCATTGTTGTGGAA 58.771 40.909 0.00 0.00 42.47 3.53
1746 1773 3.640498 TCAATCAGGCATTGTTGTGGAAA 59.360 39.130 0.00 0.00 42.47 3.13
1747 1774 3.947910 ATCAGGCATTGTTGTGGAAAG 57.052 42.857 0.00 0.00 0.00 2.62
1748 1775 1.962807 TCAGGCATTGTTGTGGAAAGG 59.037 47.619 0.00 0.00 0.00 3.11
1749 1776 1.001181 CAGGCATTGTTGTGGAAAGGG 59.999 52.381 0.00 0.00 0.00 3.95
1750 1777 1.047801 GGCATTGTTGTGGAAAGGGT 58.952 50.000 0.00 0.00 0.00 4.34
1751 1778 1.270252 GGCATTGTTGTGGAAAGGGTG 60.270 52.381 0.00 0.00 0.00 4.61
1752 1779 1.873486 GCATTGTTGTGGAAAGGGTGC 60.873 52.381 0.00 0.00 0.00 5.01
1753 1780 1.047801 ATTGTTGTGGAAAGGGTGCC 58.952 50.000 0.00 0.00 0.00 5.01
1754 1781 1.388065 TTGTTGTGGAAAGGGTGCCG 61.388 55.000 0.00 0.00 0.00 5.69
1755 1782 2.909965 TTGTGGAAAGGGTGCCGC 60.910 61.111 0.00 0.00 35.28 6.53
1756 1783 3.723097 TTGTGGAAAGGGTGCCGCA 62.723 57.895 0.00 0.00 42.49 5.69
1757 1784 2.909965 GTGGAAAGGGTGCCGCAA 60.910 61.111 0.00 0.00 34.84 4.85
1758 1785 2.123683 TGGAAAGGGTGCCGCAAA 60.124 55.556 0.00 0.00 0.00 3.68
1759 1786 1.532794 TGGAAAGGGTGCCGCAAAT 60.533 52.632 0.00 0.00 0.00 2.32
1760 1787 0.251386 TGGAAAGGGTGCCGCAAATA 60.251 50.000 0.00 0.00 0.00 1.40
1761 1788 0.455815 GGAAAGGGTGCCGCAAATAG 59.544 55.000 0.00 0.00 0.00 1.73
1762 1789 1.459450 GAAAGGGTGCCGCAAATAGA 58.541 50.000 0.00 0.00 0.00 1.98
1763 1790 2.024414 GAAAGGGTGCCGCAAATAGAT 58.976 47.619 0.00 0.00 0.00 1.98
1764 1791 3.211045 GAAAGGGTGCCGCAAATAGATA 58.789 45.455 0.00 0.00 0.00 1.98
1765 1792 2.256117 AGGGTGCCGCAAATAGATAC 57.744 50.000 0.00 0.00 0.00 2.24
1766 1793 1.768870 AGGGTGCCGCAAATAGATACT 59.231 47.619 0.00 0.00 0.00 2.12
1767 1794 2.969950 AGGGTGCCGCAAATAGATACTA 59.030 45.455 0.00 0.00 0.00 1.82
1768 1795 3.064931 GGGTGCCGCAAATAGATACTAC 58.935 50.000 0.00 0.00 0.00 2.73
1769 1796 3.244112 GGGTGCCGCAAATAGATACTACT 60.244 47.826 0.00 0.00 0.00 2.57
1770 1797 3.988517 GGTGCCGCAAATAGATACTACTC 59.011 47.826 0.00 0.00 0.00 2.59
1771 1798 3.669122 GTGCCGCAAATAGATACTACTCG 59.331 47.826 0.00 0.00 0.00 4.18
1772 1799 3.566742 TGCCGCAAATAGATACTACTCGA 59.433 43.478 0.00 0.00 0.00 4.04
1773 1800 3.913163 GCCGCAAATAGATACTACTCGAC 59.087 47.826 0.00 0.00 0.00 4.20
1774 1801 4.149617 CCGCAAATAGATACTACTCGACG 58.850 47.826 0.00 0.00 0.00 5.12
1775 1802 4.149617 CGCAAATAGATACTACTCGACGG 58.850 47.826 0.00 0.00 0.00 4.79
1776 1803 4.084171 CGCAAATAGATACTACTCGACGGA 60.084 45.833 0.00 0.00 0.00 4.69
1777 1804 5.383958 GCAAATAGATACTACTCGACGGAG 58.616 45.833 0.00 0.00 46.13 4.63
1778 1805 5.178996 GCAAATAGATACTACTCGACGGAGA 59.821 44.000 0.00 0.00 43.27 3.71
1779 1806 6.619018 GCAAATAGATACTACTCGACGGAGAG 60.619 46.154 7.70 7.70 43.27 3.20
1780 1807 5.981088 ATAGATACTACTCGACGGAGAGA 57.019 43.478 14.90 0.54 43.27 3.10
1781 1808 4.877378 AGATACTACTCGACGGAGAGAT 57.123 45.455 14.90 0.00 43.27 2.75
1782 1809 5.981088 AGATACTACTCGACGGAGAGATA 57.019 43.478 14.90 6.04 43.27 1.98
1783 1810 6.534475 AGATACTACTCGACGGAGAGATAT 57.466 41.667 14.90 9.59 43.27 1.63
1784 1811 6.334989 AGATACTACTCGACGGAGAGATATG 58.665 44.000 14.90 5.67 43.27 1.78
1785 1812 3.068560 ACTACTCGACGGAGAGATATGC 58.931 50.000 14.90 0.00 43.27 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.441780 GCTCCTCGCAACGATTAGTCG 61.442 57.143 6.04 6.04 45.39 4.18
4 5 1.201343 GCTCCTCGCAACGATTAGTC 58.799 55.000 0.00 0.00 38.92 2.59
5 6 0.525668 CGCTCCTCGCAACGATTAGT 60.526 55.000 0.00 0.00 39.08 2.24
6 7 2.208074 CGCTCCTCGCAACGATTAG 58.792 57.895 0.00 0.00 39.08 1.73
7 8 4.395080 CGCTCCTCGCAACGATTA 57.605 55.556 0.00 0.00 39.08 1.75
20 21 2.586258 TCACTAATTGAGGAGCGCTC 57.414 50.000 29.38 29.38 0.00 5.03
21 22 3.550437 AATCACTAATTGAGGAGCGCT 57.450 42.857 11.27 11.27 37.77 5.92
22 23 4.142600 ACAAAATCACTAATTGAGGAGCGC 60.143 41.667 0.00 0.00 37.77 5.92
23 24 5.551760 ACAAAATCACTAATTGAGGAGCG 57.448 39.130 0.00 0.00 37.77 5.03
24 25 8.268850 TCTTACAAAATCACTAATTGAGGAGC 57.731 34.615 0.00 0.00 37.77 4.70
31 32 9.232473 GGTCCTCTTCTTACAAAATCACTAATT 57.768 33.333 0.00 0.00 0.00 1.40
32 33 8.383175 TGGTCCTCTTCTTACAAAATCACTAAT 58.617 33.333 0.00 0.00 0.00 1.73
33 34 7.660208 GTGGTCCTCTTCTTACAAAATCACTAA 59.340 37.037 0.00 0.00 0.00 2.24
34 35 7.159372 GTGGTCCTCTTCTTACAAAATCACTA 58.841 38.462 0.00 0.00 0.00 2.74
35 36 5.998363 GTGGTCCTCTTCTTACAAAATCACT 59.002 40.000 0.00 0.00 0.00 3.41
36 37 5.107065 CGTGGTCCTCTTCTTACAAAATCAC 60.107 44.000 0.00 0.00 0.00 3.06
37 38 4.994852 CGTGGTCCTCTTCTTACAAAATCA 59.005 41.667 0.00 0.00 0.00 2.57
38 39 4.142881 GCGTGGTCCTCTTCTTACAAAATC 60.143 45.833 0.00 0.00 0.00 2.17
39 40 3.751698 GCGTGGTCCTCTTCTTACAAAAT 59.248 43.478 0.00 0.00 0.00 1.82
40 41 3.135994 GCGTGGTCCTCTTCTTACAAAA 58.864 45.455 0.00 0.00 0.00 2.44
41 42 2.367567 AGCGTGGTCCTCTTCTTACAAA 59.632 45.455 0.00 0.00 0.00 2.83
42 43 1.968493 AGCGTGGTCCTCTTCTTACAA 59.032 47.619 0.00 0.00 0.00 2.41
43 44 1.629043 AGCGTGGTCCTCTTCTTACA 58.371 50.000 0.00 0.00 0.00 2.41
44 45 2.338500 CAAGCGTGGTCCTCTTCTTAC 58.662 52.381 0.00 0.00 0.00 2.34
45 46 1.337823 GCAAGCGTGGTCCTCTTCTTA 60.338 52.381 0.79 0.00 0.00 2.10
46 47 0.603975 GCAAGCGTGGTCCTCTTCTT 60.604 55.000 0.79 0.00 0.00 2.52
47 48 1.004440 GCAAGCGTGGTCCTCTTCT 60.004 57.895 0.79 0.00 0.00 2.85
48 49 1.004440 AGCAAGCGTGGTCCTCTTC 60.004 57.895 0.00 0.00 0.00 2.87
49 50 1.302033 CAGCAAGCGTGGTCCTCTT 60.302 57.895 0.00 0.00 31.53 2.85
50 51 2.345244 CAGCAAGCGTGGTCCTCT 59.655 61.111 0.00 0.00 31.53 3.69
51 52 2.743928 CCAGCAAGCGTGGTCCTC 60.744 66.667 0.00 0.00 31.53 3.71
52 53 4.335647 CCCAGCAAGCGTGGTCCT 62.336 66.667 0.00 0.00 31.53 3.85
53 54 4.643387 ACCCAGCAAGCGTGGTCC 62.643 66.667 0.00 0.00 31.53 4.46
54 55 3.357079 CACCCAGCAAGCGTGGTC 61.357 66.667 0.00 0.00 31.53 4.02
55 56 3.872603 TCACCCAGCAAGCGTGGT 61.873 61.111 0.00 0.00 35.28 4.16
56 57 3.357079 GTCACCCAGCAAGCGTGG 61.357 66.667 0.79 0.00 34.52 4.94
57 58 2.591429 TGTCACCCAGCAAGCGTG 60.591 61.111 0.00 0.00 0.00 5.34
58 59 2.591715 GTGTCACCCAGCAAGCGT 60.592 61.111 0.00 0.00 0.00 5.07
59 60 3.357079 GGTGTCACCCAGCAAGCG 61.357 66.667 11.30 0.00 41.31 4.68
68 69 0.179018 GGCCATGATAGGGTGTCACC 60.179 60.000 14.13 14.13 37.60 4.02
69 70 0.532862 CGGCCATGATAGGGTGTCAC 60.533 60.000 2.24 0.00 0.00 3.67
70 71 0.980754 ACGGCCATGATAGGGTGTCA 60.981 55.000 2.24 0.00 0.00 3.58
71 72 1.045407 TACGGCCATGATAGGGTGTC 58.955 55.000 2.24 0.00 0.00 3.67
72 73 1.347707 CATACGGCCATGATAGGGTGT 59.652 52.381 2.24 0.00 0.00 4.16
73 74 1.347707 ACATACGGCCATGATAGGGTG 59.652 52.381 9.94 0.00 0.00 4.61
74 75 1.729586 ACATACGGCCATGATAGGGT 58.270 50.000 9.94 0.00 0.00 4.34
75 76 2.426522 CAACATACGGCCATGATAGGG 58.573 52.381 9.94 0.00 0.00 3.53
76 77 1.806542 GCAACATACGGCCATGATAGG 59.193 52.381 9.94 0.00 0.00 2.57
77 78 2.481568 CAGCAACATACGGCCATGATAG 59.518 50.000 9.94 1.09 0.00 2.08
78 79 2.493035 CAGCAACATACGGCCATGATA 58.507 47.619 9.94 0.00 0.00 2.15
79 80 1.311859 CAGCAACATACGGCCATGAT 58.688 50.000 9.94 0.00 0.00 2.45
80 81 1.375853 GCAGCAACATACGGCCATGA 61.376 55.000 9.94 0.00 0.00 3.07
81 82 1.064621 GCAGCAACATACGGCCATG 59.935 57.895 2.24 1.83 0.00 3.66
82 83 0.964860 TTGCAGCAACATACGGCCAT 60.965 50.000 2.83 0.00 0.00 4.40
83 84 0.964860 ATTGCAGCAACATACGGCCA 60.965 50.000 10.85 0.00 0.00 5.36
84 85 1.021202 TATTGCAGCAACATACGGCC 58.979 50.000 10.85 0.00 0.00 6.13
85 86 2.653890 CATATTGCAGCAACATACGGC 58.346 47.619 10.85 0.00 0.00 5.68
86 87 2.653890 GCATATTGCAGCAACATACGG 58.346 47.619 10.85 0.00 44.26 4.02
87 88 2.032979 TCGCATATTGCAGCAACATACG 60.033 45.455 12.08 12.08 45.36 3.06
88 89 3.607422 TCGCATATTGCAGCAACATAC 57.393 42.857 10.85 0.00 45.36 2.39
89 90 4.629251 TTTCGCATATTGCAGCAACATA 57.371 36.364 10.85 0.00 45.36 2.29
90 91 3.507103 TTTCGCATATTGCAGCAACAT 57.493 38.095 10.85 0.05 45.36 2.71
91 92 3.057666 TCTTTTCGCATATTGCAGCAACA 60.058 39.130 10.85 0.00 45.36 3.33
92 93 3.301642 GTCTTTTCGCATATTGCAGCAAC 59.698 43.478 10.85 0.00 45.36 4.17
93 94 3.057666 TGTCTTTTCGCATATTGCAGCAA 60.058 39.130 11.07 11.07 45.36 3.91
94 95 2.487372 TGTCTTTTCGCATATTGCAGCA 59.513 40.909 0.00 0.00 45.36 4.41
95 96 3.135414 TGTCTTTTCGCATATTGCAGC 57.865 42.857 0.00 0.00 45.36 5.25
96 97 5.401972 TGTTTTGTCTTTTCGCATATTGCAG 59.598 36.000 0.00 0.00 45.36 4.41
97 98 5.284864 TGTTTTGTCTTTTCGCATATTGCA 58.715 33.333 0.00 0.00 45.36 4.08
98 99 5.820926 TGTTTTGTCTTTTCGCATATTGC 57.179 34.783 0.00 0.00 40.69 3.56
99 100 8.586273 CCTATTGTTTTGTCTTTTCGCATATTG 58.414 33.333 0.00 0.00 0.00 1.90
100 101 8.303876 ACCTATTGTTTTGTCTTTTCGCATATT 58.696 29.630 0.00 0.00 0.00 1.28
101 102 7.826690 ACCTATTGTTTTGTCTTTTCGCATAT 58.173 30.769 0.00 0.00 0.00 1.78
102 103 7.209471 ACCTATTGTTTTGTCTTTTCGCATA 57.791 32.000 0.00 0.00 0.00 3.14
103 104 6.084326 ACCTATTGTTTTGTCTTTTCGCAT 57.916 33.333 0.00 0.00 0.00 4.73
104 105 5.508200 ACCTATTGTTTTGTCTTTTCGCA 57.492 34.783 0.00 0.00 0.00 5.10
105 106 7.114388 CCTTTACCTATTGTTTTGTCTTTTCGC 59.886 37.037 0.00 0.00 0.00 4.70
106 107 8.347035 TCCTTTACCTATTGTTTTGTCTTTTCG 58.653 33.333 0.00 0.00 0.00 3.46
107 108 9.459640 GTCCTTTACCTATTGTTTTGTCTTTTC 57.540 33.333 0.00 0.00 0.00 2.29
108 109 8.132995 CGTCCTTTACCTATTGTTTTGTCTTTT 58.867 33.333 0.00 0.00 0.00 2.27
109 110 7.283807 ACGTCCTTTACCTATTGTTTTGTCTTT 59.716 33.333 0.00 0.00 0.00 2.52
110 111 6.769341 ACGTCCTTTACCTATTGTTTTGTCTT 59.231 34.615 0.00 0.00 0.00 3.01
111 112 6.204108 CACGTCCTTTACCTATTGTTTTGTCT 59.796 38.462 0.00 0.00 0.00 3.41
112 113 6.203338 TCACGTCCTTTACCTATTGTTTTGTC 59.797 38.462 0.00 0.00 0.00 3.18
113 114 6.056884 TCACGTCCTTTACCTATTGTTTTGT 58.943 36.000 0.00 0.00 0.00 2.83
114 115 6.548441 TCACGTCCTTTACCTATTGTTTTG 57.452 37.500 0.00 0.00 0.00 2.44
115 116 8.851541 TTATCACGTCCTTTACCTATTGTTTT 57.148 30.769 0.00 0.00 0.00 2.43
116 117 8.889717 CATTATCACGTCCTTTACCTATTGTTT 58.110 33.333 0.00 0.00 0.00 2.83
117 118 7.497909 CCATTATCACGTCCTTTACCTATTGTT 59.502 37.037 0.00 0.00 0.00 2.83
118 119 6.990349 CCATTATCACGTCCTTTACCTATTGT 59.010 38.462 0.00 0.00 0.00 2.71
119 120 7.214381 TCCATTATCACGTCCTTTACCTATTG 58.786 38.462 0.00 0.00 0.00 1.90
120 121 7.369551 TCCATTATCACGTCCTTTACCTATT 57.630 36.000 0.00 0.00 0.00 1.73
121 122 6.014499 CCTCCATTATCACGTCCTTTACCTAT 60.014 42.308 0.00 0.00 0.00 2.57
122 123 5.303589 CCTCCATTATCACGTCCTTTACCTA 59.696 44.000 0.00 0.00 0.00 3.08
123 124 4.101119 CCTCCATTATCACGTCCTTTACCT 59.899 45.833 0.00 0.00 0.00 3.08
124 125 4.141779 ACCTCCATTATCACGTCCTTTACC 60.142 45.833 0.00 0.00 0.00 2.85
125 126 5.019785 ACCTCCATTATCACGTCCTTTAC 57.980 43.478 0.00 0.00 0.00 2.01
126 127 5.895534 AGTACCTCCATTATCACGTCCTTTA 59.104 40.000 0.00 0.00 0.00 1.85
127 128 4.715297 AGTACCTCCATTATCACGTCCTTT 59.285 41.667 0.00 0.00 0.00 3.11
128 129 4.287552 AGTACCTCCATTATCACGTCCTT 58.712 43.478 0.00 0.00 0.00 3.36
129 130 3.912248 AGTACCTCCATTATCACGTCCT 58.088 45.455 0.00 0.00 0.00 3.85
130 131 4.667519 AAGTACCTCCATTATCACGTCC 57.332 45.455 0.00 0.00 0.00 4.79
131 132 5.220605 GCAAAAGTACCTCCATTATCACGTC 60.221 44.000 0.00 0.00 0.00 4.34
132 133 4.634443 GCAAAAGTACCTCCATTATCACGT 59.366 41.667 0.00 0.00 0.00 4.49
133 134 4.260212 CGCAAAAGTACCTCCATTATCACG 60.260 45.833 0.00 0.00 0.00 4.35
134 135 4.873827 TCGCAAAAGTACCTCCATTATCAC 59.126 41.667 0.00 0.00 0.00 3.06
135 136 5.092554 TCGCAAAAGTACCTCCATTATCA 57.907 39.130 0.00 0.00 0.00 2.15
136 137 6.255950 GTTTCGCAAAAGTACCTCCATTATC 58.744 40.000 0.00 0.00 0.00 1.75
137 138 5.163794 CGTTTCGCAAAAGTACCTCCATTAT 60.164 40.000 0.00 0.00 0.00 1.28
138 139 4.152759 CGTTTCGCAAAAGTACCTCCATTA 59.847 41.667 0.00 0.00 0.00 1.90
139 140 3.058501 CGTTTCGCAAAAGTACCTCCATT 60.059 43.478 0.00 0.00 0.00 3.16
140 141 2.482721 CGTTTCGCAAAAGTACCTCCAT 59.517 45.455 0.00 0.00 0.00 3.41
141 142 1.868498 CGTTTCGCAAAAGTACCTCCA 59.132 47.619 0.00 0.00 0.00 3.86
142 143 2.137523 TCGTTTCGCAAAAGTACCTCC 58.862 47.619 0.00 0.00 0.00 4.30
143 144 2.157085 CCTCGTTTCGCAAAAGTACCTC 59.843 50.000 0.00 0.00 0.00 3.85
144 145 2.140717 CCTCGTTTCGCAAAAGTACCT 58.859 47.619 0.00 0.00 0.00 3.08
145 146 1.196127 CCCTCGTTTCGCAAAAGTACC 59.804 52.381 0.00 0.00 0.00 3.34
146 147 1.399343 GCCCTCGTTTCGCAAAAGTAC 60.399 52.381 0.00 0.00 0.00 2.73
147 148 0.869730 GCCCTCGTTTCGCAAAAGTA 59.130 50.000 0.00 0.00 0.00 2.24
148 149 1.652563 GCCCTCGTTTCGCAAAAGT 59.347 52.632 0.00 0.00 0.00 2.66
149 150 1.440353 CGCCCTCGTTTCGCAAAAG 60.440 57.895 0.00 0.00 0.00 2.27
150 151 1.437772 TTCGCCCTCGTTTCGCAAAA 61.438 50.000 0.00 0.00 36.96 2.44
151 152 1.437772 TTTCGCCCTCGTTTCGCAAA 61.438 50.000 0.00 0.00 36.96 3.68
152 153 1.231958 ATTTCGCCCTCGTTTCGCAA 61.232 50.000 0.00 0.00 36.96 4.85
153 154 1.669760 ATTTCGCCCTCGTTTCGCA 60.670 52.632 0.00 0.00 36.96 5.10
154 155 1.226018 CATTTCGCCCTCGTTTCGC 60.226 57.895 0.00 0.00 36.96 4.70
155 156 1.226018 GCATTTCGCCCTCGTTTCG 60.226 57.895 0.00 0.00 36.96 3.46
156 157 0.239879 TTGCATTTCGCCCTCGTTTC 59.760 50.000 0.00 0.00 41.33 2.78
157 158 0.671251 TTTGCATTTCGCCCTCGTTT 59.329 45.000 0.00 0.00 41.33 3.60
158 159 0.671251 TTTTGCATTTCGCCCTCGTT 59.329 45.000 0.00 0.00 41.33 3.85
159 160 0.671251 TTTTTGCATTTCGCCCTCGT 59.329 45.000 0.00 0.00 41.33 4.18
160 161 1.059942 GTTTTTGCATTTCGCCCTCG 58.940 50.000 0.00 0.00 41.33 4.63
161 162 2.061028 CAGTTTTTGCATTTCGCCCTC 58.939 47.619 0.00 0.00 41.33 4.30
162 163 2.153366 CAGTTTTTGCATTTCGCCCT 57.847 45.000 0.00 0.00 41.33 5.19
173 174 5.369685 AAAACAAAAGGTGGCAGTTTTTG 57.630 34.783 23.90 23.90 43.73 2.44
195 196 3.992260 TTCAAAGATTTTCGCCCGAAA 57.008 38.095 11.38 11.38 41.69 3.46
196 197 3.832276 CATTCAAAGATTTTCGCCCGAA 58.168 40.909 0.00 0.00 0.00 4.30
197 198 2.415357 GCATTCAAAGATTTTCGCCCGA 60.415 45.455 0.00 0.00 0.00 5.14
198 199 1.919918 GCATTCAAAGATTTTCGCCCG 59.080 47.619 0.00 0.00 0.00 6.13
199 200 2.958213 TGCATTCAAAGATTTTCGCCC 58.042 42.857 0.00 0.00 0.00 6.13
200 201 3.181541 CGTTGCATTCAAAGATTTTCGCC 60.182 43.478 0.00 0.00 34.28 5.54
201 202 3.718898 GCGTTGCATTCAAAGATTTTCGC 60.719 43.478 0.00 0.00 34.28 4.70
202 203 3.670055 AGCGTTGCATTCAAAGATTTTCG 59.330 39.130 0.00 0.00 34.28 3.46
203 204 6.875926 ATAGCGTTGCATTCAAAGATTTTC 57.124 33.333 0.00 0.00 34.28 2.29
204 205 7.599998 AGAAATAGCGTTGCATTCAAAGATTTT 59.400 29.630 0.00 0.00 34.28 1.82
205 206 7.092716 AGAAATAGCGTTGCATTCAAAGATTT 58.907 30.769 0.00 0.00 34.28 2.17
206 207 6.624423 AGAAATAGCGTTGCATTCAAAGATT 58.376 32.000 0.00 0.00 34.28 2.40
207 208 6.199937 AGAAATAGCGTTGCATTCAAAGAT 57.800 33.333 0.00 0.00 34.28 2.40
208 209 5.627499 AGAAATAGCGTTGCATTCAAAGA 57.373 34.783 0.00 0.00 34.28 2.52
209 210 6.695292 AAAGAAATAGCGTTGCATTCAAAG 57.305 33.333 0.00 0.00 33.37 2.77
210 211 7.649705 TGTAAAAGAAATAGCGTTGCATTCAAA 59.350 29.630 0.00 0.00 33.37 2.69
211 212 7.142021 TGTAAAAGAAATAGCGTTGCATTCAA 58.858 30.769 0.00 0.00 0.00 2.69
212 213 6.673106 TGTAAAAGAAATAGCGTTGCATTCA 58.327 32.000 0.00 0.00 0.00 2.57
213 214 7.021196 TCTGTAAAAGAAATAGCGTTGCATTC 58.979 34.615 0.00 0.00 29.54 2.67
214 215 6.908825 TCTGTAAAAGAAATAGCGTTGCATT 58.091 32.000 0.00 0.00 29.54 3.56
215 216 6.494893 TCTGTAAAAGAAATAGCGTTGCAT 57.505 33.333 0.00 0.00 29.54 3.96
216 217 5.933187 TCTGTAAAAGAAATAGCGTTGCA 57.067 34.783 0.00 0.00 29.54 4.08
228 229 6.660521 AGGTGATCAATGCATTCTGTAAAAGA 59.339 34.615 9.53 1.40 0.00 2.52
229 230 6.750501 CAGGTGATCAATGCATTCTGTAAAAG 59.249 38.462 9.53 0.00 0.00 2.27
230 231 6.623486 CAGGTGATCAATGCATTCTGTAAAA 58.377 36.000 9.53 0.00 0.00 1.52
231 232 5.393352 GCAGGTGATCAATGCATTCTGTAAA 60.393 40.000 22.84 0.32 39.75 2.01
232 233 4.096833 GCAGGTGATCAATGCATTCTGTAA 59.903 41.667 22.84 2.62 39.75 2.41
233 234 3.628942 GCAGGTGATCAATGCATTCTGTA 59.371 43.478 22.84 4.65 39.75 2.74
234 235 2.426024 GCAGGTGATCAATGCATTCTGT 59.574 45.455 22.84 6.47 39.75 3.41
235 236 2.688446 AGCAGGTGATCAATGCATTCTG 59.312 45.455 27.07 13.39 42.45 3.02
236 237 3.014304 AGCAGGTGATCAATGCATTCT 57.986 42.857 27.07 10.86 42.45 2.40
237 238 3.795623 AAGCAGGTGATCAATGCATTC 57.204 42.857 27.07 0.00 42.45 2.67
238 239 4.142093 GGTTAAGCAGGTGATCAATGCATT 60.142 41.667 27.07 20.94 42.45 3.56
239 240 3.382546 GGTTAAGCAGGTGATCAATGCAT 59.617 43.478 27.07 20.81 42.45 3.96
240 241 2.754552 GGTTAAGCAGGTGATCAATGCA 59.245 45.455 27.07 11.71 42.45 3.96
241 242 2.099756 GGGTTAAGCAGGTGATCAATGC 59.900 50.000 21.10 21.10 40.29 3.56
242 243 3.355378 TGGGTTAAGCAGGTGATCAATG 58.645 45.455 7.03 0.26 0.00 2.82
243 244 3.266772 TCTGGGTTAAGCAGGTGATCAAT 59.733 43.478 7.03 0.00 0.00 2.57
244 245 2.642311 TCTGGGTTAAGCAGGTGATCAA 59.358 45.455 7.03 0.00 0.00 2.57
245 246 2.265367 TCTGGGTTAAGCAGGTGATCA 58.735 47.619 7.03 0.00 0.00 2.92
246 247 3.567478 ATCTGGGTTAAGCAGGTGATC 57.433 47.619 7.03 0.00 0.00 2.92
247 248 5.132648 TCATAATCTGGGTTAAGCAGGTGAT 59.867 40.000 7.03 1.74 0.00 3.06
248 249 4.473196 TCATAATCTGGGTTAAGCAGGTGA 59.527 41.667 7.03 0.00 0.00 4.02
249 250 4.780815 TCATAATCTGGGTTAAGCAGGTG 58.219 43.478 7.03 0.00 0.00 4.00
250 251 5.653255 ATCATAATCTGGGTTAAGCAGGT 57.347 39.130 7.03 0.00 0.00 4.00
251 252 5.645497 GCTATCATAATCTGGGTTAAGCAGG 59.355 44.000 7.03 0.00 0.00 4.85
252 253 6.471146 AGCTATCATAATCTGGGTTAAGCAG 58.529 40.000 7.03 2.74 0.00 4.24
253 254 6.439636 AGCTATCATAATCTGGGTTAAGCA 57.560 37.500 7.03 0.00 0.00 3.91
254 255 6.150140 CCAAGCTATCATAATCTGGGTTAAGC 59.850 42.308 0.00 0.00 0.00 3.09
255 256 6.656693 CCCAAGCTATCATAATCTGGGTTAAG 59.343 42.308 6.21 0.00 0.00 1.85
256 257 6.542821 CCCAAGCTATCATAATCTGGGTTAA 58.457 40.000 6.21 0.00 0.00 2.01
257 258 5.514834 GCCCAAGCTATCATAATCTGGGTTA 60.515 44.000 14.31 0.00 36.50 2.85
258 259 4.751028 GCCCAAGCTATCATAATCTGGGTT 60.751 45.833 14.31 0.00 36.50 4.11
259 260 3.245052 GCCCAAGCTATCATAATCTGGGT 60.245 47.826 14.31 0.00 36.50 4.51
260 261 3.350833 GCCCAAGCTATCATAATCTGGG 58.649 50.000 9.57 9.57 37.15 4.45
261 262 3.009916 AGGCCCAAGCTATCATAATCTGG 59.990 47.826 0.00 0.00 39.73 3.86
262 263 4.008330 CAGGCCCAAGCTATCATAATCTG 58.992 47.826 0.00 0.00 39.73 2.90
263 264 3.560882 GCAGGCCCAAGCTATCATAATCT 60.561 47.826 0.00 0.00 39.73 2.40
264 265 2.751806 GCAGGCCCAAGCTATCATAATC 59.248 50.000 0.00 0.00 39.73 1.75
265 266 2.556114 GGCAGGCCCAAGCTATCATAAT 60.556 50.000 11.63 0.00 39.73 1.28
266 267 1.202927 GGCAGGCCCAAGCTATCATAA 60.203 52.381 11.63 0.00 39.73 1.90
267 268 0.401738 GGCAGGCCCAAGCTATCATA 59.598 55.000 11.63 0.00 39.73 2.15
268 269 1.152368 GGCAGGCCCAAGCTATCAT 59.848 57.895 11.63 0.00 39.73 2.45
269 270 2.002977 AGGCAGGCCCAAGCTATCA 61.003 57.895 6.70 0.00 39.73 2.15
270 271 1.527844 CAGGCAGGCCCAAGCTATC 60.528 63.158 6.70 0.00 39.73 2.08
271 272 2.276309 GACAGGCAGGCCCAAGCTAT 62.276 60.000 6.70 0.00 39.73 2.97
272 273 2.935481 ACAGGCAGGCCCAAGCTA 60.935 61.111 6.70 0.00 39.73 3.32
273 274 4.357279 GACAGGCAGGCCCAAGCT 62.357 66.667 6.70 0.00 39.73 3.74
274 275 4.666253 TGACAGGCAGGCCCAAGC 62.666 66.667 6.70 0.35 36.58 4.01
275 276 2.360852 CTGACAGGCAGGCCCAAG 60.361 66.667 6.70 0.00 41.07 3.61
285 286 1.748122 GCCACATCAGCCTGACAGG 60.748 63.158 17.83 17.83 38.80 4.00
286 287 0.607217 TTGCCACATCAGCCTGACAG 60.607 55.000 0.00 0.00 0.00 3.51
287 288 0.178995 TTTGCCACATCAGCCTGACA 60.179 50.000 0.00 0.00 0.00 3.58
288 289 0.961019 TTTTGCCACATCAGCCTGAC 59.039 50.000 0.00 0.00 0.00 3.51
289 290 1.702182 TTTTTGCCACATCAGCCTGA 58.298 45.000 0.00 0.00 0.00 3.86
306 307 2.279935 TGTGCCGGAGTGGTATTTTT 57.720 45.000 5.05 0.00 41.21 1.94
307 308 2.491693 CAATGTGCCGGAGTGGTATTTT 59.508 45.455 5.05 0.00 41.21 1.82
308 309 2.091541 CAATGTGCCGGAGTGGTATTT 58.908 47.619 5.05 0.00 41.21 1.40
309 310 1.280710 TCAATGTGCCGGAGTGGTATT 59.719 47.619 5.05 0.00 41.21 1.89
310 311 0.908910 TCAATGTGCCGGAGTGGTAT 59.091 50.000 5.05 0.00 41.21 2.73
311 312 0.036765 GTCAATGTGCCGGAGTGGTA 60.037 55.000 5.05 0.00 41.21 3.25
312 313 1.302511 GTCAATGTGCCGGAGTGGT 60.303 57.895 5.05 0.00 41.21 4.16
313 314 0.606401 AAGTCAATGTGCCGGAGTGG 60.606 55.000 5.05 0.00 42.50 4.00
314 315 0.518636 CAAGTCAATGTGCCGGAGTG 59.481 55.000 5.05 0.00 0.00 3.51
315 316 0.606401 CCAAGTCAATGTGCCGGAGT 60.606 55.000 5.05 0.00 0.00 3.85
316 317 0.606401 ACCAAGTCAATGTGCCGGAG 60.606 55.000 5.05 0.00 0.00 4.63
317 318 0.605319 GACCAAGTCAATGTGCCGGA 60.605 55.000 5.05 0.00 32.09 5.14
318 319 0.606401 AGACCAAGTCAATGTGCCGG 60.606 55.000 0.00 0.00 34.60 6.13
319 320 1.197721 GAAGACCAAGTCAATGTGCCG 59.802 52.381 0.00 0.00 34.60 5.69
320 321 1.541588 GGAAGACCAAGTCAATGTGCC 59.458 52.381 0.00 0.00 34.60 5.01
321 322 2.485814 GAGGAAGACCAAGTCAATGTGC 59.514 50.000 0.00 0.00 38.94 4.57
322 323 3.743521 TGAGGAAGACCAAGTCAATGTG 58.256 45.455 0.00 0.00 38.94 3.21
323 324 4.647564 ATGAGGAAGACCAAGTCAATGT 57.352 40.909 0.00 0.00 38.94 2.71
324 325 7.052873 AGATTATGAGGAAGACCAAGTCAATG 58.947 38.462 0.00 0.00 38.94 2.82
325 326 7.205515 AGATTATGAGGAAGACCAAGTCAAT 57.794 36.000 0.00 0.00 38.94 2.57
326 327 6.627087 AGATTATGAGGAAGACCAAGTCAA 57.373 37.500 0.00 0.00 38.94 3.18
327 328 6.325028 CCTAGATTATGAGGAAGACCAAGTCA 59.675 42.308 0.00 0.00 38.94 3.41
328 329 6.325286 ACCTAGATTATGAGGAAGACCAAGTC 59.675 42.308 0.00 0.00 38.94 3.01
329 330 6.206042 ACCTAGATTATGAGGAAGACCAAGT 58.794 40.000 0.00 0.00 38.94 3.16
330 331 6.325028 TGACCTAGATTATGAGGAAGACCAAG 59.675 42.308 0.00 0.00 38.94 3.61
331 332 6.202331 TGACCTAGATTATGAGGAAGACCAA 58.798 40.000 0.00 0.00 38.94 3.67
332 333 5.777449 TGACCTAGATTATGAGGAAGACCA 58.223 41.667 0.00 0.00 38.94 4.02
333 334 6.325286 ACTTGACCTAGATTATGAGGAAGACC 59.675 42.308 0.00 0.00 36.61 3.85
334 335 7.068839 TCACTTGACCTAGATTATGAGGAAGAC 59.931 40.741 0.00 0.00 36.61 3.01
335 336 7.126061 TCACTTGACCTAGATTATGAGGAAGA 58.874 38.462 0.00 0.00 36.61 2.87
336 337 7.353414 TCACTTGACCTAGATTATGAGGAAG 57.647 40.000 0.00 0.00 36.61 3.46
337 338 6.183360 GCTCACTTGACCTAGATTATGAGGAA 60.183 42.308 0.00 0.00 36.61 3.36
338 339 5.303078 GCTCACTTGACCTAGATTATGAGGA 59.697 44.000 0.00 0.00 36.61 3.71
339 340 5.304101 AGCTCACTTGACCTAGATTATGAGG 59.696 44.000 0.00 0.00 38.92 3.86
340 341 6.403866 AGCTCACTTGACCTAGATTATGAG 57.596 41.667 0.00 0.00 36.30 2.90
341 342 7.725844 TGATAGCTCACTTGACCTAGATTATGA 59.274 37.037 0.00 0.00 0.00 2.15
342 343 7.890515 TGATAGCTCACTTGACCTAGATTATG 58.109 38.462 0.00 0.00 0.00 1.90
343 344 8.484214 TTGATAGCTCACTTGACCTAGATTAT 57.516 34.615 0.00 0.00 0.00 1.28
344 345 7.898014 TTGATAGCTCACTTGACCTAGATTA 57.102 36.000 0.00 0.00 0.00 1.75
345 346 6.798427 TTGATAGCTCACTTGACCTAGATT 57.202 37.500 0.00 0.00 0.00 2.40
346 347 6.740960 GCATTGATAGCTCACTTGACCTAGAT 60.741 42.308 0.00 0.00 0.00 1.98
347 348 5.452496 GCATTGATAGCTCACTTGACCTAGA 60.452 44.000 0.00 0.00 0.00 2.43
348 349 4.749099 GCATTGATAGCTCACTTGACCTAG 59.251 45.833 0.00 0.00 0.00 3.02
349 350 4.162131 TGCATTGATAGCTCACTTGACCTA 59.838 41.667 0.00 0.00 0.00 3.08
350 351 3.054875 TGCATTGATAGCTCACTTGACCT 60.055 43.478 0.00 0.00 0.00 3.85
351 352 3.273434 TGCATTGATAGCTCACTTGACC 58.727 45.455 0.00 0.00 0.00 4.02
352 353 3.937706 ACTGCATTGATAGCTCACTTGAC 59.062 43.478 0.00 0.00 0.00 3.18
353 354 4.186926 GACTGCATTGATAGCTCACTTGA 58.813 43.478 0.00 0.00 0.00 3.02
354 355 3.937079 TGACTGCATTGATAGCTCACTTG 59.063 43.478 0.00 0.00 0.00 3.16
355 356 4.190001 CTGACTGCATTGATAGCTCACTT 58.810 43.478 0.00 0.00 0.00 3.16
356 357 3.197333 ACTGACTGCATTGATAGCTCACT 59.803 43.478 0.00 0.00 0.00 3.41
357 358 3.529533 ACTGACTGCATTGATAGCTCAC 58.470 45.455 0.00 0.00 0.00 3.51
358 359 3.900966 ACTGACTGCATTGATAGCTCA 57.099 42.857 0.00 0.00 0.00 4.26
359 360 6.668541 TTTTACTGACTGCATTGATAGCTC 57.331 37.500 0.00 0.00 0.00 4.09
381 382 5.336293 CCCACCAAAAGCAAACACAATTTTT 60.336 36.000 0.00 0.00 0.00 1.94
382 383 4.157472 CCCACCAAAAGCAAACACAATTTT 59.843 37.500 0.00 0.00 0.00 1.82
383 384 3.693578 CCCACCAAAAGCAAACACAATTT 59.306 39.130 0.00 0.00 0.00 1.82
384 385 3.277715 CCCACCAAAAGCAAACACAATT 58.722 40.909 0.00 0.00 0.00 2.32
385 386 2.238395 ACCCACCAAAAGCAAACACAAT 59.762 40.909 0.00 0.00 0.00 2.71
386 387 1.625818 ACCCACCAAAAGCAAACACAA 59.374 42.857 0.00 0.00 0.00 3.33
387 388 1.270907 ACCCACCAAAAGCAAACACA 58.729 45.000 0.00 0.00 0.00 3.72
388 389 2.394930 AACCCACCAAAAGCAAACAC 57.605 45.000 0.00 0.00 0.00 3.32
389 390 3.077359 CAAAACCCACCAAAAGCAAACA 58.923 40.909 0.00 0.00 0.00 2.83
390 391 3.078097 ACAAAACCCACCAAAAGCAAAC 58.922 40.909 0.00 0.00 0.00 2.93
391 392 3.425162 ACAAAACCCACCAAAAGCAAA 57.575 38.095 0.00 0.00 0.00 3.68
392 393 4.553330 TTACAAAACCCACCAAAAGCAA 57.447 36.364 0.00 0.00 0.00 3.91
393 394 4.553330 TTTACAAAACCCACCAAAAGCA 57.447 36.364 0.00 0.00 0.00 3.91
394 395 5.881777 TTTTTACAAAACCCACCAAAAGC 57.118 34.783 0.00 0.00 0.00 3.51
414 415 5.751509 GTCATTAACAGAAAACCGCCTTTTT 59.248 36.000 0.00 0.00 31.81 1.94
415 416 5.286438 GTCATTAACAGAAAACCGCCTTTT 58.714 37.500 0.00 0.00 34.56 2.27
416 417 4.555906 CGTCATTAACAGAAAACCGCCTTT 60.556 41.667 0.00 0.00 0.00 3.11
417 418 3.058501 CGTCATTAACAGAAAACCGCCTT 60.059 43.478 0.00 0.00 0.00 4.35
418 419 2.482721 CGTCATTAACAGAAAACCGCCT 59.517 45.455 0.00 0.00 0.00 5.52
419 420 2.481185 TCGTCATTAACAGAAAACCGCC 59.519 45.455 0.00 0.00 0.00 6.13
420 421 3.059461 TGTCGTCATTAACAGAAAACCGC 60.059 43.478 0.00 0.00 0.00 5.68
421 422 4.025563 TGTGTCGTCATTAACAGAAAACCG 60.026 41.667 0.00 0.00 0.00 4.44
422 423 5.412526 TGTGTCGTCATTAACAGAAAACC 57.587 39.130 0.00 0.00 0.00 3.27
423 424 7.431084 ACAATTGTGTCGTCATTAACAGAAAAC 59.569 33.333 11.07 0.00 33.13 2.43
424 425 7.430793 CACAATTGTGTCGTCATTAACAGAAAA 59.569 33.333 27.08 0.00 40.96 2.29
425 426 6.909895 CACAATTGTGTCGTCATTAACAGAAA 59.090 34.615 27.08 0.00 40.96 2.52
426 427 6.258947 TCACAATTGTGTCGTCATTAACAGAA 59.741 34.615 31.99 9.45 45.76 3.02
427 428 5.755861 TCACAATTGTGTCGTCATTAACAGA 59.244 36.000 31.99 10.05 45.76 3.41
428 429 5.845953 GTCACAATTGTGTCGTCATTAACAG 59.154 40.000 31.99 7.36 45.76 3.16
429 430 5.294552 TGTCACAATTGTGTCGTCATTAACA 59.705 36.000 31.99 23.31 45.76 2.41
430 431 5.743467 TGTCACAATTGTGTCGTCATTAAC 58.257 37.500 31.99 21.38 45.76 2.01
431 432 5.993106 TGTCACAATTGTGTCGTCATTAA 57.007 34.783 31.99 11.80 45.76 1.40
432 433 5.468409 ACATGTCACAATTGTGTCGTCATTA 59.532 36.000 31.99 14.19 45.76 1.90
433 434 4.275689 ACATGTCACAATTGTGTCGTCATT 59.724 37.500 31.99 19.14 45.76 2.57
434 435 3.814842 ACATGTCACAATTGTGTCGTCAT 59.185 39.130 31.99 26.06 45.76 3.06
435 436 3.202097 ACATGTCACAATTGTGTCGTCA 58.798 40.909 31.99 25.29 45.76 4.35
436 437 3.878086 ACATGTCACAATTGTGTCGTC 57.122 42.857 31.99 21.71 45.76 4.20
437 438 4.350346 CAAACATGTCACAATTGTGTCGT 58.650 39.130 31.99 26.04 45.76 4.34
438 439 3.730215 CCAAACATGTCACAATTGTGTCG 59.270 43.478 31.99 21.84 45.76 4.35
439 440 4.930963 TCCAAACATGTCACAATTGTGTC 58.069 39.130 31.99 27.66 45.76 3.67
440 441 4.998671 TCCAAACATGTCACAATTGTGT 57.001 36.364 31.99 15.21 45.76 3.72
441 442 4.746115 CCTTCCAAACATGTCACAATTGTG 59.254 41.667 29.01 29.01 46.91 3.33
442 443 4.202243 CCCTTCCAAACATGTCACAATTGT 60.202 41.667 4.92 4.92 0.00 2.71
443 444 4.039004 TCCCTTCCAAACATGTCACAATTG 59.961 41.667 3.24 3.24 0.00 2.32
444 445 4.222336 TCCCTTCCAAACATGTCACAATT 58.778 39.130 0.00 0.00 0.00 2.32
445 446 3.828451 CTCCCTTCCAAACATGTCACAAT 59.172 43.478 0.00 0.00 0.00 2.71
446 447 3.221771 CTCCCTTCCAAACATGTCACAA 58.778 45.455 0.00 0.00 0.00 3.33
447 448 2.488891 CCTCCCTTCCAAACATGTCACA 60.489 50.000 0.00 0.00 0.00 3.58
448 449 2.162681 CCTCCCTTCCAAACATGTCAC 58.837 52.381 0.00 0.00 0.00 3.67
449 450 2.061848 TCCTCCCTTCCAAACATGTCA 58.938 47.619 0.00 0.00 0.00 3.58
450 451 2.879103 TCCTCCCTTCCAAACATGTC 57.121 50.000 0.00 0.00 0.00 3.06
451 452 3.117131 ACTTTCCTCCCTTCCAAACATGT 60.117 43.478 0.00 0.00 0.00 3.21
452 453 3.256631 CACTTTCCTCCCTTCCAAACATG 59.743 47.826 0.00 0.00 0.00 3.21
455 456 2.885266 GTCACTTTCCTCCCTTCCAAAC 59.115 50.000 0.00 0.00 0.00 2.93
482 483 8.225416 TCCAAACTCTGGCTATATTACTAGAGA 58.775 37.037 18.78 1.21 45.98 3.10
487 488 6.615726 TCCTTCCAAACTCTGGCTATATTACT 59.384 38.462 0.00 0.00 45.98 2.24
703 705 4.322049 CCAACTAATCTGACCAGTCTCGTT 60.322 45.833 0.00 0.00 0.00 3.85
713 715 1.737793 CCAACGCCCAACTAATCTGAC 59.262 52.381 0.00 0.00 0.00 3.51
977 981 1.526887 CATACCACCCGAGCCACAT 59.473 57.895 0.00 0.00 0.00 3.21
1001 1005 1.228521 CCCAGCACACATCCAACCA 60.229 57.895 0.00 0.00 0.00 3.67
1148 1152 7.275779 TGAGATCTTTATGTTCAAACGTAGCTC 59.724 37.037 0.00 0.00 32.45 4.09
1155 1159 7.329471 GGGCTTTTGAGATCTTTATGTTCAAAC 59.671 37.037 0.00 0.00 37.45 2.93
1293 1297 4.174762 CGCAGATTCTCATCATCATCGAT 58.825 43.478 0.00 0.00 0.00 3.59
1379 1385 1.419387 GGCAGCCTATCCTTGACAGAT 59.581 52.381 3.29 0.00 0.00 2.90
1467 1475 2.628178 GAGTCCCCAAAAGAAACCCAAG 59.372 50.000 0.00 0.00 0.00 3.61
1475 1483 0.841289 ACCAACGAGTCCCCAAAAGA 59.159 50.000 0.00 0.00 0.00 2.52
1489 1497 4.844884 ACCTAAAGGATCTAAGCACCAAC 58.155 43.478 2.23 0.00 38.94 3.77
1496 1504 4.755411 TCACGCAACCTAAAGGATCTAAG 58.245 43.478 2.23 0.00 38.94 2.18
1580 1589 2.451490 TCAAAGCACCACTGGAAAACA 58.549 42.857 0.71 0.00 0.00 2.83
1657 1684 7.438459 AGCATAACGGAAATACATAGTTCAGAC 59.562 37.037 6.30 0.00 32.39 3.51
1695 1722 1.358152 TTGAACCGGATCTCAACCCT 58.642 50.000 9.46 0.00 0.00 4.34
1720 1747 6.363882 TCCACAACAATGCCTGATTGATATA 58.636 36.000 2.51 0.00 43.87 0.86
1721 1748 5.202765 TCCACAACAATGCCTGATTGATAT 58.797 37.500 2.51 0.00 43.87 1.63
1725 1752 3.663995 TTCCACAACAATGCCTGATTG 57.336 42.857 0.00 0.00 46.20 2.67
1726 1753 3.007182 CCTTTCCACAACAATGCCTGATT 59.993 43.478 0.00 0.00 0.00 2.57
1727 1754 2.564062 CCTTTCCACAACAATGCCTGAT 59.436 45.455 0.00 0.00 0.00 2.90
1728 1755 1.962807 CCTTTCCACAACAATGCCTGA 59.037 47.619 0.00 0.00 0.00 3.86
1729 1756 1.001181 CCCTTTCCACAACAATGCCTG 59.999 52.381 0.00 0.00 0.00 4.85
1730 1757 1.341080 CCCTTTCCACAACAATGCCT 58.659 50.000 0.00 0.00 0.00 4.75
1731 1758 1.047801 ACCCTTTCCACAACAATGCC 58.952 50.000 0.00 0.00 0.00 4.40
1732 1759 1.873486 GCACCCTTTCCACAACAATGC 60.873 52.381 0.00 0.00 0.00 3.56
1733 1760 1.270252 GGCACCCTTTCCACAACAATG 60.270 52.381 0.00 0.00 0.00 2.82
1734 1761 1.047801 GGCACCCTTTCCACAACAAT 58.952 50.000 0.00 0.00 0.00 2.71
1735 1762 1.388065 CGGCACCCTTTCCACAACAA 61.388 55.000 0.00 0.00 0.00 2.83
1736 1763 1.826054 CGGCACCCTTTCCACAACA 60.826 57.895 0.00 0.00 0.00 3.33
1737 1764 3.039134 CGGCACCCTTTCCACAAC 58.961 61.111 0.00 0.00 0.00 3.32
1738 1765 2.909965 GCGGCACCCTTTCCACAA 60.910 61.111 0.00 0.00 0.00 3.33
1739 1766 3.723097 TTGCGGCACCCTTTCCACA 62.723 57.895 0.05 0.00 0.00 4.17
1740 1767 1.815817 ATTTGCGGCACCCTTTCCAC 61.816 55.000 0.05 0.00 0.00 4.02
1741 1768 0.251386 TATTTGCGGCACCCTTTCCA 60.251 50.000 0.05 0.00 0.00 3.53
1742 1769 0.455815 CTATTTGCGGCACCCTTTCC 59.544 55.000 0.05 0.00 0.00 3.13
1743 1770 1.459450 TCTATTTGCGGCACCCTTTC 58.541 50.000 0.05 0.00 0.00 2.62
1744 1771 2.143876 ATCTATTTGCGGCACCCTTT 57.856 45.000 0.05 0.00 0.00 3.11
1745 1772 2.172717 AGTATCTATTTGCGGCACCCTT 59.827 45.455 0.05 0.00 0.00 3.95
1746 1773 1.768870 AGTATCTATTTGCGGCACCCT 59.231 47.619 0.05 0.00 0.00 4.34
1747 1774 2.256117 AGTATCTATTTGCGGCACCC 57.744 50.000 0.05 0.00 0.00 4.61
1748 1775 3.988517 GAGTAGTATCTATTTGCGGCACC 59.011 47.826 0.05 0.00 0.00 5.01
1749 1776 3.669122 CGAGTAGTATCTATTTGCGGCAC 59.331 47.826 0.05 0.00 0.00 5.01
1750 1777 3.566742 TCGAGTAGTATCTATTTGCGGCA 59.433 43.478 0.00 0.00 0.00 5.69
1751 1778 3.913163 GTCGAGTAGTATCTATTTGCGGC 59.087 47.826 0.00 0.00 0.00 6.53
1752 1779 4.149617 CGTCGAGTAGTATCTATTTGCGG 58.850 47.826 0.00 0.00 0.00 5.69
1753 1780 4.084171 TCCGTCGAGTAGTATCTATTTGCG 60.084 45.833 0.00 0.00 0.00 4.85
1754 1781 5.178996 TCTCCGTCGAGTAGTATCTATTTGC 59.821 44.000 0.00 0.00 37.40 3.68
1755 1782 6.645827 TCTCTCCGTCGAGTAGTATCTATTTG 59.354 42.308 0.00 0.00 37.40 2.32
1756 1783 6.757237 TCTCTCCGTCGAGTAGTATCTATTT 58.243 40.000 0.00 0.00 37.40 1.40
1757 1784 6.343716 TCTCTCCGTCGAGTAGTATCTATT 57.656 41.667 0.00 0.00 37.40 1.73
1758 1785 5.981088 TCTCTCCGTCGAGTAGTATCTAT 57.019 43.478 0.00 0.00 37.40 1.98
1759 1786 5.981088 ATCTCTCCGTCGAGTAGTATCTA 57.019 43.478 0.00 0.00 37.40 1.98
1760 1787 4.877378 ATCTCTCCGTCGAGTAGTATCT 57.123 45.455 0.00 0.00 37.40 1.98
1761 1788 5.005971 GCATATCTCTCCGTCGAGTAGTATC 59.994 48.000 0.00 0.00 37.40 2.24
1762 1789 4.871557 GCATATCTCTCCGTCGAGTAGTAT 59.128 45.833 0.00 0.00 37.40 2.12
1763 1790 4.244066 GCATATCTCTCCGTCGAGTAGTA 58.756 47.826 0.00 0.00 37.40 1.82
1764 1791 3.068560 GCATATCTCTCCGTCGAGTAGT 58.931 50.000 0.00 0.00 37.40 2.73
1765 1792 2.417239 GGCATATCTCTCCGTCGAGTAG 59.583 54.545 0.00 0.00 37.40 2.57
1766 1793 2.424557 GGCATATCTCTCCGTCGAGTA 58.575 52.381 0.00 0.00 37.40 2.59
1767 1794 1.240256 GGCATATCTCTCCGTCGAGT 58.760 55.000 0.00 0.00 37.40 4.18
1768 1795 0.167033 CGGCATATCTCTCCGTCGAG 59.833 60.000 0.00 0.00 38.47 4.04
1769 1796 0.250166 TCGGCATATCTCTCCGTCGA 60.250 55.000 0.00 0.00 43.35 4.20
1770 1797 0.110147 GTCGGCATATCTCTCCGTCG 60.110 60.000 0.00 0.00 43.35 5.12
1771 1798 0.110147 CGTCGGCATATCTCTCCGTC 60.110 60.000 0.00 0.00 43.35 4.79
1772 1799 1.516365 CCGTCGGCATATCTCTCCGT 61.516 60.000 0.00 0.00 43.35 4.69
1773 1800 1.210413 CCGTCGGCATATCTCTCCG 59.790 63.158 0.00 0.00 44.16 4.63
2282 2430 3.715097 GGGCTCAGCTGGTCTGCT 61.715 66.667 15.13 0.00 45.18 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.