Multiple sequence alignment - TraesCS7A01G358600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G358600 chr7A 100.000 5843 0 0 1 5843 531735077 531729235 0.000000e+00 10791.0
1 TraesCS7A01G358600 chr7A 82.927 123 18 3 5650 5770 556765707 556765586 2.230000e-19 108.0
2 TraesCS7A01G358600 chr7A 84.848 99 14 1 5658 5756 536157342 536157245 1.340000e-16 99.0
3 TraesCS7A01G358600 chr7A 81.651 109 19 1 5650 5757 672985214 672985106 8.060000e-14 89.8
4 TraesCS7A01G358600 chr7A 78.689 122 25 1 5650 5770 209161062 209161183 4.850000e-11 80.5
5 TraesCS7A01G358600 chr7B 93.715 2689 118 27 2849 5518 492494114 492496770 0.000000e+00 3982.0
6 TraesCS7A01G358600 chr7B 93.783 1496 69 12 1363 2838 492492505 492493996 0.000000e+00 2226.0
7 TraesCS7A01G358600 chr7B 93.016 315 13 7 588 900 492491717 492492024 8.930000e-123 451.0
8 TraesCS7A01G358600 chr7D 94.404 2448 91 16 2849 5287 468935544 468937954 0.000000e+00 3720.0
9 TraesCS7A01G358600 chr7D 92.270 2432 110 46 449 2838 468933031 468935426 0.000000e+00 3378.0
10 TraesCS7A01G358600 chr7D 83.554 377 45 8 1 368 468932667 468933035 2.610000e-88 337.0
11 TraesCS7A01G358600 chr7D 92.350 183 13 1 5265 5446 468938470 468938652 5.810000e-65 259.0
12 TraesCS7A01G358600 chr7D 83.051 118 17 3 5650 5766 116469396 116469511 2.880000e-18 104.0
13 TraesCS7A01G358600 chr3D 81.776 214 37 2 4616 4828 62070205 62070417 1.670000e-40 178.0
14 TraesCS7A01G358600 chr3A 81.643 207 36 2 4616 4821 71148984 71149189 2.800000e-38 171.0
15 TraesCS7A01G358600 chr3A 79.167 120 24 1 5650 5769 511594161 511594279 1.350000e-11 82.4
16 TraesCS7A01G358600 chr4A 80.000 120 24 0 5650 5769 593201598 593201717 8.060000e-14 89.8
17 TraesCS7A01G358600 chrUn 79.646 113 21 2 5647 5757 298409799 298409911 4.850000e-11 80.5
18 TraesCS7A01G358600 chr5B 79.646 113 21 2 5647 5757 633636059 633636171 4.850000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G358600 chr7A 531729235 531735077 5842 True 10791.000000 10791 100.000000 1 5843 1 chr7A.!!$R1 5842
1 TraesCS7A01G358600 chr7B 492491717 492496770 5053 False 2219.666667 3982 93.504667 588 5518 3 chr7B.!!$F1 4930
2 TraesCS7A01G358600 chr7D 468932667 468938652 5985 False 1923.500000 3720 90.644500 1 5446 4 chr7D.!!$F2 5445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 160 0.044161 GCACGCTTACGCTAACATCG 60.044 55.000 0.00 0.00 45.53 3.84 F
1301 1323 0.958822 GCGTTGGATTGTTTGGAGGT 59.041 50.000 0.00 0.00 0.00 3.85 F
1999 2050 0.108585 TGAGGTGCCTGGTCAAACTC 59.891 55.000 0.00 6.40 0.00 3.01 F
2050 2101 0.837691 TGAGGATCAGTGGCCAGTGT 60.838 55.000 34.27 23.63 42.56 3.55 F
2781 2850 1.876156 GCACCAACAGAGAACTTCCAG 59.124 52.381 0.00 0.00 0.00 3.86 F
4001 4183 1.008538 GGACTGTTTGTTGCAGCGG 60.009 57.895 0.00 0.00 37.47 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1657 1704 0.042731 AGGTAGGTAGAGGCCAGCAA 59.957 55.000 5.01 0.0 0.00 3.91 R
3229 3405 1.302271 CAGCAGTGAAGCAGCCTCA 60.302 57.895 0.00 0.0 36.85 3.86 R
3632 3813 3.198068 AGTAAGAATGTATGCACCAGCG 58.802 45.455 0.00 0.0 46.23 5.18 R
3932 4114 4.133820 ACAACAAATTCGACATCACCTGA 58.866 39.130 0.00 0.0 0.00 3.86 R
4261 4446 2.472695 TGCTTTGCCGTTGATCTAGT 57.527 45.000 0.00 0.0 0.00 2.57 R
5730 6473 0.025001 CGCGCATCGTCGAAAATTCT 59.975 50.000 8.75 0.0 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.070001 CGGGATTAGATGCCCTTTCAATAA 58.930 41.667 0.00 0.00 42.40 1.40
48 49 9.123902 TCAATAATACATGAGATGGTCAAAAGG 57.876 33.333 0.00 0.00 39.19 3.11
49 50 8.906867 CAATAATACATGAGATGGTCAAAAGGT 58.093 33.333 0.00 0.00 39.19 3.50
51 52 3.424703 ACATGAGATGGTCAAAAGGTGG 58.575 45.455 0.00 0.00 39.19 4.61
53 54 3.593442 TGAGATGGTCAAAAGGTGGTT 57.407 42.857 0.00 0.00 29.64 3.67
54 55 3.909732 TGAGATGGTCAAAAGGTGGTTT 58.090 40.909 0.00 0.00 29.64 3.27
56 57 5.450453 TGAGATGGTCAAAAGGTGGTTTTA 58.550 37.500 0.00 0.00 36.11 1.52
57 58 6.074648 TGAGATGGTCAAAAGGTGGTTTTAT 58.925 36.000 0.00 0.00 36.11 1.40
60 61 8.122472 AGATGGTCAAAAGGTGGTTTTATTAG 57.878 34.615 0.00 0.00 36.11 1.73
61 62 7.947890 AGATGGTCAAAAGGTGGTTTTATTAGA 59.052 33.333 0.00 0.00 36.11 2.10
65 66 8.080417 GGTCAAAAGGTGGTTTTATTAGAAGAC 58.920 37.037 0.00 0.00 36.11 3.01
67 68 6.812879 AAAGGTGGTTTTATTAGAAGACGG 57.187 37.500 0.00 0.00 0.00 4.79
68 69 4.840271 AGGTGGTTTTATTAGAAGACGGG 58.160 43.478 0.00 0.00 0.00 5.28
70 71 3.943381 GTGGTTTTATTAGAAGACGGGGG 59.057 47.826 0.00 0.00 0.00 5.40
75 76 6.349611 GGTTTTATTAGAAGACGGGGGAAAAC 60.350 42.308 0.00 0.00 34.87 2.43
104 112 7.148641 CACACCTATGACTAAATCGCTATCTT 58.851 38.462 0.00 0.00 0.00 2.40
116 124 2.281498 TCGCTATCTTTCGCATCAAACG 59.719 45.455 0.00 0.00 0.00 3.60
124 132 0.516877 TCGCATCAAACGCCTTCAAG 59.483 50.000 0.00 0.00 0.00 3.02
136 144 1.803555 GCCTTCAAGAAGAGAGTGCAC 59.196 52.381 9.40 9.40 40.79 4.57
152 160 0.044161 GCACGCTTACGCTAACATCG 60.044 55.000 0.00 0.00 45.53 3.84
157 165 2.284288 CGCTTACGCTAACATCGTCAAC 60.284 50.000 0.00 0.00 40.89 3.18
165 173 2.550830 AACATCGTCAACTCCAGCTT 57.449 45.000 0.00 0.00 0.00 3.74
167 175 0.994995 CATCGTCAACTCCAGCTTCG 59.005 55.000 0.00 0.00 0.00 3.79
194 202 7.814642 AGCAACTCTCAATAAACTTGATCTTG 58.185 34.615 0.00 0.00 0.00 3.02
195 203 7.446625 AGCAACTCTCAATAAACTTGATCTTGT 59.553 33.333 0.00 0.00 0.00 3.16
209 217 9.588096 AACTTGATCTTGTTATTTCTAACCCTT 57.412 29.630 0.00 0.00 37.09 3.95
215 223 8.528044 TCTTGTTATTTCTAACCCTTTTGTGT 57.472 30.769 0.00 0.00 37.09 3.72
222 230 2.003196 AACCCTTTTGTGTTTGTGCG 57.997 45.000 0.00 0.00 0.00 5.34
253 261 2.977169 CGTTGCAACTCCATTTTTACGG 59.023 45.455 26.09 3.12 0.00 4.02
256 264 2.287909 TGCAACTCCATTTTTACGGCAC 60.288 45.455 0.00 0.00 0.00 5.01
261 269 4.391155 ACTCCATTTTTACGGCACACTAA 58.609 39.130 0.00 0.00 0.00 2.24
267 275 1.276820 TTACGGCACACTAACACGCG 61.277 55.000 3.53 3.53 0.00 6.01
268 276 4.424430 CGGCACACTAACACGCGC 62.424 66.667 5.73 0.00 0.00 6.86
269 277 4.084888 GGCACACTAACACGCGCC 62.085 66.667 5.73 0.00 0.00 6.53
270 278 3.342627 GCACACTAACACGCGCCA 61.343 61.111 5.73 0.00 0.00 5.69
287 295 1.798813 GCCATGCGTTGCTATGAAACC 60.799 52.381 0.00 0.00 0.00 3.27
298 306 6.345723 CGTTGCTATGAAACCACAAAAATGAC 60.346 38.462 0.00 0.00 0.00 3.06
303 311 8.863049 GCTATGAAACCACAAAAATGACTAATG 58.137 33.333 0.00 0.00 0.00 1.90
304 312 9.357652 CTATGAAACCACAAAAATGACTAATGG 57.642 33.333 0.00 0.00 0.00 3.16
313 321 9.520204 CACAAAAATGACTAATGGTATTGGATC 57.480 33.333 0.00 0.00 0.00 3.36
320 328 9.601810 ATGACTAATGGTATTGGATCAGTAGTA 57.398 33.333 0.00 0.00 40.73 1.82
373 381 7.703298 CAACATTGCAGAGAAAGAAAATCAA 57.297 32.000 0.00 0.00 0.00 2.57
374 382 8.306680 CAACATTGCAGAGAAAGAAAATCAAT 57.693 30.769 0.00 0.00 0.00 2.57
375 383 8.433126 CAACATTGCAGAGAAAGAAAATCAATC 58.567 33.333 0.00 0.00 0.00 2.67
376 384 7.663827 ACATTGCAGAGAAAGAAAATCAATCA 58.336 30.769 0.00 0.00 0.00 2.57
377 385 8.145767 ACATTGCAGAGAAAGAAAATCAATCAA 58.854 29.630 0.00 0.00 0.00 2.57
378 386 8.648097 CATTGCAGAGAAAGAAAATCAATCAAG 58.352 33.333 0.00 0.00 0.00 3.02
379 387 6.154445 TGCAGAGAAAGAAAATCAATCAAGC 58.846 36.000 0.00 0.00 0.00 4.01
380 388 5.285607 GCAGAGAAAGAAAATCAATCAAGCG 59.714 40.000 0.00 0.00 0.00 4.68
381 389 6.605849 CAGAGAAAGAAAATCAATCAAGCGA 58.394 36.000 0.00 0.00 0.00 4.93
382 390 7.249147 CAGAGAAAGAAAATCAATCAAGCGAT 58.751 34.615 0.00 0.00 0.00 4.58
383 391 7.218393 CAGAGAAAGAAAATCAATCAAGCGATG 59.782 37.037 0.00 0.00 30.13 3.84
384 392 7.120285 AGAGAAAGAAAATCAATCAAGCGATGA 59.880 33.333 0.00 0.00 43.67 2.92
385 393 7.596494 AGAAAGAAAATCAATCAAGCGATGAA 58.404 30.769 0.00 0.00 42.54 2.57
386 394 7.754027 AGAAAGAAAATCAATCAAGCGATGAAG 59.246 33.333 0.00 0.00 42.54 3.02
387 395 6.506500 AGAAAATCAATCAAGCGATGAAGT 57.493 33.333 0.00 0.00 42.54 3.01
388 396 6.549952 AGAAAATCAATCAAGCGATGAAGTC 58.450 36.000 0.00 0.00 42.54 3.01
396 404 2.815308 CGATGAAGTCGGGAGGGG 59.185 66.667 0.00 0.00 46.47 4.79
397 405 2.058595 CGATGAAGTCGGGAGGGGT 61.059 63.158 0.00 0.00 46.47 4.95
398 406 1.522569 GATGAAGTCGGGAGGGGTG 59.477 63.158 0.00 0.00 0.00 4.61
399 407 1.972660 GATGAAGTCGGGAGGGGTGG 61.973 65.000 0.00 0.00 0.00 4.61
400 408 3.400054 GAAGTCGGGAGGGGTGGG 61.400 72.222 0.00 0.00 0.00 4.61
435 443 4.452733 GTCCAACGGGGGAGCGAG 62.453 72.222 0.00 0.00 37.71 5.03
438 446 4.821589 CAACGGGGGAGCGAGCTC 62.822 72.222 16.14 16.14 42.04 4.09
444 452 4.459089 GGGAGCGAGCTCACCACC 62.459 72.222 24.21 13.51 44.40 4.61
445 453 3.695606 GGAGCGAGCTCACCACCA 61.696 66.667 24.21 0.00 44.40 4.17
446 454 2.433318 GAGCGAGCTCACCACCAC 60.433 66.667 19.09 0.00 42.31 4.16
447 455 3.941657 GAGCGAGCTCACCACCACC 62.942 68.421 19.09 0.00 42.31 4.61
448 456 4.314440 GCGAGCTCACCACCACCA 62.314 66.667 15.40 0.00 0.00 4.17
449 457 2.425592 CGAGCTCACCACCACCAA 59.574 61.111 15.40 0.00 0.00 3.67
450 458 1.961277 CGAGCTCACCACCACCAAC 60.961 63.158 15.40 0.00 0.00 3.77
467 475 5.183140 CCACCAACAACTCCAAATTAGTAGG 59.817 44.000 0.00 0.00 0.00 3.18
469 477 5.073965 ACCAACAACTCCAAATTAGTAGGGA 59.926 40.000 0.00 0.00 0.00 4.20
609 626 5.814705 TCAAAACAAGGTTAGCAACAAATGG 59.185 36.000 0.00 0.00 0.00 3.16
698 718 2.031683 CCGTCTTTTTAGCATTAGCCGG 59.968 50.000 0.00 0.00 43.56 6.13
699 719 2.031683 CGTCTTTTTAGCATTAGCCGGG 59.968 50.000 2.18 0.00 43.56 5.73
706 726 5.979288 TTTAGCATTAGCCGGGTTTTTAA 57.021 34.783 13.43 0.00 43.56 1.52
708 728 6.532988 TTAGCATTAGCCGGGTTTTTAAAT 57.467 33.333 13.43 1.31 43.56 1.40
710 730 6.532988 AGCATTAGCCGGGTTTTTAAATTA 57.467 33.333 13.43 0.00 43.56 1.40
711 731 6.569780 AGCATTAGCCGGGTTTTTAAATTAG 58.430 36.000 13.43 0.00 43.56 1.73
712 732 6.378848 AGCATTAGCCGGGTTTTTAAATTAGA 59.621 34.615 13.43 0.00 43.56 2.10
713 733 7.069455 AGCATTAGCCGGGTTTTTAAATTAGAT 59.931 33.333 13.43 0.00 43.56 1.98
714 734 7.709182 GCATTAGCCGGGTTTTTAAATTAGATT 59.291 33.333 13.43 0.00 33.58 2.40
717 737 9.683870 TTAGCCGGGTTTTTAAATTAGATTAGA 57.316 29.630 13.43 0.00 0.00 2.10
768 788 2.622064 AATAACCTGGACCGATCTGC 57.378 50.000 0.00 0.00 0.00 4.26
947 969 1.448717 GAGCGAGAGGTTGGGAAGC 60.449 63.158 0.00 0.00 45.11 3.86
952 974 3.647771 GAGGTTGGGAAGCGGGGT 61.648 66.667 0.00 0.00 0.00 4.95
953 975 3.182996 AGGTTGGGAAGCGGGGTT 61.183 61.111 0.00 0.00 0.00 4.11
956 978 4.293671 TTGGGAAGCGGGGTTGGG 62.294 66.667 0.00 0.00 0.00 4.12
981 1003 3.440415 CTCTTTTTCGGCGGGGGC 61.440 66.667 7.21 0.00 0.00 5.80
1181 1203 2.718073 GCATTGGAGCTGCTTGGGG 61.718 63.158 6.82 0.00 36.68 4.96
1198 1220 2.730934 GGGGGAGGATTGAAAGGTAC 57.269 55.000 0.00 0.00 0.00 3.34
1204 1226 1.093496 GGATTGAAAGGTACGGGCGG 61.093 60.000 0.00 0.00 0.00 6.13
1244 1266 4.816925 GGTGGTGATATTGGAGTTTAGCTC 59.183 45.833 0.00 0.00 43.39 4.09
1301 1323 0.958822 GCGTTGGATTGTTTGGAGGT 59.041 50.000 0.00 0.00 0.00 3.85
1304 1326 1.539827 GTTGGATTGTTTGGAGGTCCG 59.460 52.381 0.00 0.00 39.43 4.79
1328 1350 1.889170 GGAAAGGGCTTTTCTGGAGTG 59.111 52.381 19.69 0.00 43.81 3.51
1333 1355 3.374764 AGGGCTTTTCTGGAGTGTTTTT 58.625 40.909 0.00 0.00 0.00 1.94
1394 1434 3.644966 TCTCCTGAAGTTGTGTTGGTT 57.355 42.857 0.00 0.00 0.00 3.67
1410 1451 6.153680 TGTGTTGGTTTCAGAATTAACCTTGT 59.846 34.615 8.86 0.00 43.36 3.16
1425 1466 5.948992 AACCTTGTCTGCTTGTAGATTTC 57.051 39.130 0.00 0.00 0.00 2.17
1446 1488 2.239400 GGTTCTTTGGGCTAGTTGCTT 58.761 47.619 0.00 0.00 42.39 3.91
1476 1522 7.610865 TGTCTGGTTTCTTGTTCAGAATTTTT 58.389 30.769 0.00 0.00 41.42 1.94
1477 1523 7.545265 TGTCTGGTTTCTTGTTCAGAATTTTTG 59.455 33.333 0.00 0.00 41.42 2.44
1548 1595 8.587608 TGCTTATTGGTTCATGAGAATTTCTTT 58.412 29.630 0.00 0.00 35.92 2.52
1549 1596 9.080915 GCTTATTGGTTCATGAGAATTTCTTTC 57.919 33.333 0.00 0.00 35.92 2.62
1581 1628 2.229784 GTCCAATTGGAGTTTGCTCTGG 59.770 50.000 27.73 0.00 46.49 3.86
1625 1672 2.299170 CATCTGCGTCGTGTAGTATCG 58.701 52.381 0.00 0.00 0.00 2.92
1628 1675 2.099621 CTGCGTCGTGTAGTATCGAAC 58.900 52.381 0.00 0.00 37.81 3.95
1630 1677 2.929398 TGCGTCGTGTAGTATCGAACTA 59.071 45.455 0.00 0.00 39.80 2.24
1657 1704 0.770557 TTTAGGGTGCCTCCTGTGGT 60.771 55.000 5.32 0.00 37.75 4.16
1702 1749 1.994779 CATGCGGATTTCTTTTGTGGC 59.005 47.619 0.00 0.00 0.00 5.01
1833 1883 1.068434 GCTTTTGGGTTGTAGCTTGCA 59.932 47.619 0.00 0.00 0.00 4.08
1845 1895 2.867109 AGCTTGCATGTCCTAACTGT 57.133 45.000 1.14 0.00 0.00 3.55
1999 2050 0.108585 TGAGGTGCCTGGTCAAACTC 59.891 55.000 0.00 6.40 0.00 3.01
2014 2065 5.278022 GGTCAAACTCAAGTTCATCCTTGTC 60.278 44.000 0.00 0.00 42.01 3.18
2034 2085 3.921021 GTCGGTGTTGTCATAGTTCTGAG 59.079 47.826 0.00 0.00 0.00 3.35
2050 2101 0.837691 TGAGGATCAGTGGCCAGTGT 60.838 55.000 34.27 23.63 42.56 3.55
2183 2241 5.644636 ACAGTTGTGGAAGAAACGAGTTTAA 59.355 36.000 0.76 0.00 32.11 1.52
2262 2320 6.714810 TGTATGGTTTACAAGAAATCTGCACT 59.285 34.615 0.00 0.00 0.00 4.40
2264 2322 4.229876 GGTTTACAAGAAATCTGCACTGC 58.770 43.478 0.00 0.00 0.00 4.40
2309 2367 9.046296 CCATTATAAGATTGGTGAGTGTCTTAC 57.954 37.037 0.00 0.00 36.37 2.34
2362 2427 5.180492 TGGACTAATTCCTAAACTTGTTGCG 59.820 40.000 0.00 0.00 46.10 4.85
2363 2428 5.043189 ACTAATTCCTAAACTTGTTGCGC 57.957 39.130 0.00 0.00 0.00 6.09
2719 2788 6.494893 TGACTAATGGTGCTGTTGTTATTC 57.505 37.500 0.00 0.00 0.00 1.75
2731 2800 9.774742 GTGCTGTTGTTATTCTTTCTTATTAGG 57.225 33.333 0.00 0.00 0.00 2.69
2764 2833 7.962918 CCAACTCAGTTTTAGTATAACATGCAC 59.037 37.037 6.30 0.00 0.00 4.57
2781 2850 1.876156 GCACCAACAGAGAACTTCCAG 59.124 52.381 0.00 0.00 0.00 3.86
2783 2852 3.545703 CACCAACAGAGAACTTCCAGTT 58.454 45.455 0.00 0.00 41.95 3.16
2820 2889 5.997129 TCTTTGCTTCAATTTGGGGAAATTC 59.003 36.000 0.00 0.00 30.51 2.17
2931 3107 4.022416 TCCATGTTTGCATAACACCTTGTC 60.022 41.667 14.04 0.00 33.30 3.18
2972 3148 8.477984 AACATCATATACAAACAAAACATGGC 57.522 30.769 0.00 0.00 0.00 4.40
3117 3293 4.379174 CACCTGTGCAGTGTACCC 57.621 61.111 9.00 0.00 0.00 3.69
3229 3405 3.041946 CCAAGGACTACTATTCTGCCCT 58.958 50.000 0.00 0.00 0.00 5.19
3330 3507 9.573133 AGACTTTGTTCTTACAATGAAGTTTTG 57.427 29.630 9.88 0.00 43.43 2.44
3333 3510 6.463995 TGTTCTTACAATGAAGTTTTGGCT 57.536 33.333 0.00 0.00 0.00 4.75
3334 3511 6.872920 TGTTCTTACAATGAAGTTTTGGCTT 58.127 32.000 0.00 0.00 0.00 4.35
3346 3523 7.994194 TGAAGTTTTGGCTTTTTGCATTTATT 58.006 26.923 0.00 0.00 45.15 1.40
3348 3525 9.943163 GAAGTTTTGGCTTTTTGCATTTATTTA 57.057 25.926 0.00 0.00 45.15 1.40
3354 3531 9.499479 TTGGCTTTTTGCATTTATTTATCTTCA 57.501 25.926 0.00 0.00 45.15 3.02
3355 3532 9.669887 TGGCTTTTTGCATTTATTTATCTTCAT 57.330 25.926 0.00 0.00 45.15 2.57
3530 3707 8.519799 TTGATTTCTTTGGGTACATATTCTCC 57.480 34.615 0.00 0.00 0.00 3.71
3535 3715 5.600898 TCTTTGGGTACATATTCTCCGATGA 59.399 40.000 0.00 0.00 0.00 2.92
3632 3813 3.334691 TGTTATGTGCTTAGGTGTCAGC 58.665 45.455 0.00 0.00 36.49 4.26
3715 3896 5.068723 TCCTACTGGTTGCACTACTAATAGC 59.931 44.000 0.00 0.00 34.23 2.97
3719 3900 7.125792 ACTGGTTGCACTACTAATAGCTATT 57.874 36.000 22.09 22.09 30.75 1.73
3721 3902 7.495934 ACTGGTTGCACTACTAATAGCTATTTG 59.504 37.037 23.47 22.40 30.75 2.32
3724 3905 7.041098 GGTTGCACTACTAATAGCTATTTGCAT 60.041 37.037 29.59 15.72 45.94 3.96
3725 3906 8.345565 GTTGCACTACTAATAGCTATTTGCATT 58.654 33.333 29.59 15.19 45.94 3.56
3757 3938 4.097437 CAGACAAAGTATAGGGAGCGTGTA 59.903 45.833 0.00 0.00 0.00 2.90
3833 4014 8.724310 AGTGGTTCTATAATAAGGTAGCCATTT 58.276 33.333 0.00 0.00 0.00 2.32
3853 4034 8.631797 GCCATTTAGTATATAGCCTCTAGTACC 58.368 40.741 0.00 0.00 0.00 3.34
4001 4183 1.008538 GGACTGTTTGTTGCAGCGG 60.009 57.895 0.00 0.00 37.47 5.52
4022 4204 4.201881 CGGTACTTTGGCAAGGTAATAAGC 60.202 45.833 21.78 11.90 33.82 3.09
4091 4275 3.559655 TGTGATCTTGAACACTTCCGTTG 59.440 43.478 11.28 0.00 37.81 4.10
4127 4311 2.804856 GAGTGCGAGGAGGCTCTC 59.195 66.667 15.23 8.96 43.58 3.20
4179 4363 5.061808 CGTGTAGAAGTGTATGTACTTTGCC 59.938 44.000 0.00 0.00 40.78 4.52
4181 4365 6.425721 GTGTAGAAGTGTATGTACTTTGCCAA 59.574 38.462 0.00 0.00 40.78 4.52
4182 4366 6.993308 TGTAGAAGTGTATGTACTTTGCCAAA 59.007 34.615 0.00 0.00 40.78 3.28
4183 4367 6.952773 AGAAGTGTATGTACTTTGCCAAAA 57.047 33.333 0.00 0.00 40.78 2.44
4184 4368 7.341445 AGAAGTGTATGTACTTTGCCAAAAA 57.659 32.000 0.00 0.00 40.78 1.94
4236 4421 9.102757 TGTCTCTGTAATTTTATCTTGCTGATC 57.897 33.333 0.00 0.00 36.65 2.92
4261 4446 8.758829 TCTAGCCTGTCTTAATTCATGAAGTTA 58.241 33.333 14.34 3.94 0.00 2.24
4547 4732 6.820656 CAGTGCTCTTGTTGAGGTATCTATTT 59.179 38.462 0.00 0.00 42.87 1.40
4812 5002 1.228245 GGGTGTGAAGCTGAAGCCA 60.228 57.895 0.00 0.00 43.38 4.75
4824 5014 0.320334 TGAAGCCAATCAAGACGCGA 60.320 50.000 15.93 0.00 0.00 5.87
4836 5026 1.880340 GACGCGAGCCAATCTCAGG 60.880 63.158 15.93 0.00 41.98 3.86
4839 5029 1.078143 GCGAGCCAATCTCAGGGTT 60.078 57.895 0.00 0.00 41.98 4.11
4861 5051 8.877195 GGGTTTAGGTACATATATGGAAGAAGA 58.123 37.037 16.96 0.00 0.00 2.87
4880 5079 3.491342 AGAAGAAGAAAAGGTTGGAGGC 58.509 45.455 0.00 0.00 0.00 4.70
4882 5081 0.241213 GAAGAAAAGGTTGGAGGCGC 59.759 55.000 0.00 0.00 0.00 6.53
5028 5227 1.187087 GTTGGTTGGTTGGTTGGTGA 58.813 50.000 0.00 0.00 0.00 4.02
5137 5340 2.947127 ATAAAGGGAGGCTGATGAGC 57.053 50.000 0.00 0.00 45.40 4.26
5164 5367 1.695893 CGATTAGGTGCGCACACTGG 61.696 60.000 38.60 19.70 46.57 4.00
5165 5368 0.673644 GATTAGGTGCGCACACTGGT 60.674 55.000 38.60 23.95 46.57 4.00
5166 5369 0.955428 ATTAGGTGCGCACACTGGTG 60.955 55.000 38.60 0.00 46.57 4.17
5167 5370 2.318519 TTAGGTGCGCACACTGGTGT 62.319 55.000 38.60 17.23 46.95 4.16
5168 5371 2.709125 TAGGTGCGCACACTGGTGTC 62.709 60.000 38.60 20.37 46.95 3.67
5169 5372 2.588877 GTGCGCACACTGGTGTCT 60.589 61.111 34.52 0.00 46.95 3.41
5170 5373 2.588596 TGCGCACACTGGTGTCTG 60.589 61.111 5.66 1.05 46.95 3.51
5171 5374 2.588877 GCGCACACTGGTGTCTGT 60.589 61.111 0.30 0.00 46.95 3.41
5172 5375 2.180204 GCGCACACTGGTGTCTGTT 61.180 57.895 0.30 0.00 46.95 3.16
5183 5386 1.068741 GGTGTCTGTTCTCCACTTCGT 59.931 52.381 0.00 0.00 0.00 3.85
5339 6082 0.754957 TTGTGGCCAGGACCAAGTTG 60.755 55.000 5.11 0.00 42.70 3.16
5348 6091 3.016736 CAGGACCAAGTTGTCAGTTGTT 58.983 45.455 1.45 0.00 36.97 2.83
5349 6092 4.196193 CAGGACCAAGTTGTCAGTTGTTA 58.804 43.478 1.45 0.00 36.97 2.41
5352 6095 4.201980 GGACCAAGTTGTCAGTTGTTAACC 60.202 45.833 2.48 0.00 36.97 2.85
5381 6124 1.302511 GCCCCAAGCTCGACTGAAA 60.303 57.895 0.00 0.00 38.99 2.69
5472 6215 7.326968 TGTTTGACACAATGAAGATGTTACA 57.673 32.000 0.00 0.00 29.87 2.41
5473 6216 7.939782 TGTTTGACACAATGAAGATGTTACAT 58.060 30.769 0.00 0.00 29.87 2.29
5474 6217 7.861872 TGTTTGACACAATGAAGATGTTACATG 59.138 33.333 1.24 0.00 29.87 3.21
5475 6218 7.509141 TTGACACAATGAAGATGTTACATGT 57.491 32.000 1.24 2.69 0.00 3.21
5476 6219 6.901265 TGACACAATGAAGATGTTACATGTG 58.099 36.000 9.11 7.00 33.69 3.21
5477 6220 6.486320 TGACACAATGAAGATGTTACATGTGT 59.514 34.615 15.52 15.52 38.08 3.72
5480 6223 7.013178 ACACAATGAAGATGTTACATGTGTCAA 59.987 33.333 9.11 0.00 34.62 3.18
5485 6228 6.202762 TGAAGATGTTACATGTGTCAAGTGTC 59.797 38.462 9.11 2.55 0.00 3.67
5486 6229 5.610398 AGATGTTACATGTGTCAAGTGTCA 58.390 37.500 9.11 0.00 0.00 3.58
5487 6230 6.233434 AGATGTTACATGTGTCAAGTGTCAT 58.767 36.000 9.11 0.00 0.00 3.06
5498 6241 4.699735 TGTCAAGTGTCATGTTTGTCAACT 59.300 37.500 0.00 0.00 33.58 3.16
5518 6261 4.848357 ACTTGTGGTTGGATGATTAGGAG 58.152 43.478 0.00 0.00 0.00 3.69
5519 6262 4.289672 ACTTGTGGTTGGATGATTAGGAGT 59.710 41.667 0.00 0.00 0.00 3.85
5520 6263 5.487488 ACTTGTGGTTGGATGATTAGGAGTA 59.513 40.000 0.00 0.00 0.00 2.59
5521 6264 6.158695 ACTTGTGGTTGGATGATTAGGAGTAT 59.841 38.462 0.00 0.00 0.00 2.12
5522 6265 7.347222 ACTTGTGGTTGGATGATTAGGAGTATA 59.653 37.037 0.00 0.00 0.00 1.47
5523 6266 7.303182 TGTGGTTGGATGATTAGGAGTATAG 57.697 40.000 0.00 0.00 0.00 1.31
5524 6267 6.844388 TGTGGTTGGATGATTAGGAGTATAGT 59.156 38.462 0.00 0.00 0.00 2.12
5525 6268 7.155328 GTGGTTGGATGATTAGGAGTATAGTG 58.845 42.308 0.00 0.00 0.00 2.74
5526 6269 6.270000 TGGTTGGATGATTAGGAGTATAGTGG 59.730 42.308 0.00 0.00 0.00 4.00
5527 6270 6.270231 GGTTGGATGATTAGGAGTATAGTGGT 59.730 42.308 0.00 0.00 0.00 4.16
5528 6271 7.453752 GGTTGGATGATTAGGAGTATAGTGGTA 59.546 40.741 0.00 0.00 0.00 3.25
5529 6272 9.036980 GTTGGATGATTAGGAGTATAGTGGTAT 57.963 37.037 0.00 0.00 0.00 2.73
5530 6273 8.824756 TGGATGATTAGGAGTATAGTGGTATC 57.175 38.462 0.00 0.00 0.00 2.24
5531 6274 7.839705 TGGATGATTAGGAGTATAGTGGTATCC 59.160 40.741 0.00 0.00 0.00 2.59
5532 6275 8.062536 GGATGATTAGGAGTATAGTGGTATCCT 58.937 40.741 0.00 0.00 42.89 3.24
5533 6276 9.127277 GATGATTAGGAGTATAGTGGTATCCTC 57.873 40.741 0.00 0.00 40.77 3.71
5534 6277 7.996788 TGATTAGGAGTATAGTGGTATCCTCA 58.003 38.462 0.00 0.00 40.77 3.86
5535 6278 8.110271 TGATTAGGAGTATAGTGGTATCCTCAG 58.890 40.741 0.00 0.00 40.77 3.35
5536 6279 5.933846 AGGAGTATAGTGGTATCCTCAGT 57.066 43.478 0.00 0.00 35.44 3.41
5537 6280 5.883180 AGGAGTATAGTGGTATCCTCAGTC 58.117 45.833 0.00 0.00 35.44 3.51
5538 6281 5.011586 GGAGTATAGTGGTATCCTCAGTCC 58.988 50.000 0.00 0.00 0.00 3.85
5539 6282 5.457778 GGAGTATAGTGGTATCCTCAGTCCA 60.458 48.000 0.00 0.00 0.00 4.02
5542 6285 1.568504 GTGGTATCCTCAGTCCACCA 58.431 55.000 0.00 0.00 42.90 4.17
5543 6286 1.482593 GTGGTATCCTCAGTCCACCAG 59.517 57.143 0.00 0.00 42.90 4.00
5544 6287 1.078823 TGGTATCCTCAGTCCACCAGT 59.921 52.381 0.00 0.00 34.40 4.00
5545 6288 2.313643 TGGTATCCTCAGTCCACCAGTA 59.686 50.000 0.00 0.00 34.40 2.74
5546 6289 3.052109 TGGTATCCTCAGTCCACCAGTAT 60.052 47.826 0.00 0.00 34.40 2.12
5547 6290 3.574826 GGTATCCTCAGTCCACCAGTATC 59.425 52.174 0.00 0.00 0.00 2.24
5548 6291 2.160721 TCCTCAGTCCACCAGTATCC 57.839 55.000 0.00 0.00 0.00 2.59
5549 6292 1.646447 TCCTCAGTCCACCAGTATCCT 59.354 52.381 0.00 0.00 0.00 3.24
5550 6293 2.856864 TCCTCAGTCCACCAGTATCCTA 59.143 50.000 0.00 0.00 0.00 2.94
5551 6294 3.117474 TCCTCAGTCCACCAGTATCCTAG 60.117 52.174 0.00 0.00 0.00 3.02
5552 6295 3.117474 CCTCAGTCCACCAGTATCCTAGA 60.117 52.174 0.00 0.00 0.00 2.43
5553 6296 3.886505 CTCAGTCCACCAGTATCCTAGAC 59.113 52.174 0.00 0.00 0.00 2.59
5554 6297 3.268595 TCAGTCCACCAGTATCCTAGACA 59.731 47.826 0.00 0.00 0.00 3.41
5555 6298 4.023980 CAGTCCACCAGTATCCTAGACAA 58.976 47.826 0.00 0.00 0.00 3.18
5556 6299 4.024670 AGTCCACCAGTATCCTAGACAAC 58.975 47.826 0.00 0.00 0.00 3.32
5557 6300 4.024670 GTCCACCAGTATCCTAGACAACT 58.975 47.826 0.00 0.00 0.00 3.16
5558 6301 4.098196 GTCCACCAGTATCCTAGACAACTC 59.902 50.000 0.00 0.00 0.00 3.01
5559 6302 3.385111 CCACCAGTATCCTAGACAACTCC 59.615 52.174 0.00 0.00 0.00 3.85
5560 6303 3.066900 CACCAGTATCCTAGACAACTCCG 59.933 52.174 0.00 0.00 0.00 4.63
5561 6304 2.623889 CCAGTATCCTAGACAACTCCGG 59.376 54.545 0.00 0.00 0.00 5.14
5562 6305 3.288964 CAGTATCCTAGACAACTCCGGT 58.711 50.000 0.00 0.00 0.00 5.28
5563 6306 3.066900 CAGTATCCTAGACAACTCCGGTG 59.933 52.174 0.00 0.00 0.00 4.94
5564 6307 2.233305 ATCCTAGACAACTCCGGTGT 57.767 50.000 2.61 2.61 0.00 4.16
5565 6308 2.005370 TCCTAGACAACTCCGGTGTT 57.995 50.000 15.97 15.97 0.00 3.32
5566 6309 1.891150 TCCTAGACAACTCCGGTGTTC 59.109 52.381 18.66 9.38 0.00 3.18
5567 6310 1.616865 CCTAGACAACTCCGGTGTTCA 59.383 52.381 18.66 4.50 0.00 3.18
5568 6311 2.609737 CCTAGACAACTCCGGTGTTCAC 60.610 54.545 18.66 14.64 0.00 3.18
5569 6312 1.120530 AGACAACTCCGGTGTTCACT 58.879 50.000 18.66 16.42 0.00 3.41
5570 6313 1.485066 AGACAACTCCGGTGTTCACTT 59.515 47.619 18.66 4.23 0.00 3.16
5571 6314 1.865340 GACAACTCCGGTGTTCACTTC 59.135 52.381 18.66 9.38 0.00 3.01
5572 6315 1.485066 ACAACTCCGGTGTTCACTTCT 59.515 47.619 18.66 0.00 0.00 2.85
5573 6316 2.093128 ACAACTCCGGTGTTCACTTCTT 60.093 45.455 18.66 0.00 0.00 2.52
5574 6317 3.133362 ACAACTCCGGTGTTCACTTCTTA 59.867 43.478 18.66 0.00 0.00 2.10
5575 6318 4.202326 ACAACTCCGGTGTTCACTTCTTAT 60.202 41.667 18.66 0.00 0.00 1.73
5576 6319 3.926616 ACTCCGGTGTTCACTTCTTATG 58.073 45.455 2.61 0.00 0.00 1.90
5577 6320 3.323979 ACTCCGGTGTTCACTTCTTATGT 59.676 43.478 2.61 0.00 0.00 2.29
5578 6321 4.525487 ACTCCGGTGTTCACTTCTTATGTA 59.475 41.667 2.61 0.00 0.00 2.29
5579 6322 5.187186 ACTCCGGTGTTCACTTCTTATGTAT 59.813 40.000 2.61 0.00 0.00 2.29
5580 6323 5.416083 TCCGGTGTTCACTTCTTATGTATG 58.584 41.667 0.00 0.00 0.00 2.39
5581 6324 4.034048 CCGGTGTTCACTTCTTATGTATGC 59.966 45.833 0.00 0.00 0.00 3.14
5582 6325 4.629634 CGGTGTTCACTTCTTATGTATGCA 59.370 41.667 0.00 0.00 0.00 3.96
5583 6326 5.294306 CGGTGTTCACTTCTTATGTATGCAT 59.706 40.000 3.79 3.79 39.03 3.96
5584 6327 6.489675 GGTGTTCACTTCTTATGTATGCATG 58.510 40.000 10.16 0.00 36.58 4.06
5585 6328 5.967674 GTGTTCACTTCTTATGTATGCATGC 59.032 40.000 11.82 11.82 36.58 4.06
5586 6329 5.647225 TGTTCACTTCTTATGTATGCATGCA 59.353 36.000 25.04 25.04 36.58 3.96
5587 6330 6.319405 TGTTCACTTCTTATGTATGCATGCAT 59.681 34.615 33.92 33.92 40.19 3.96
5588 6331 6.308371 TCACTTCTTATGTATGCATGCATG 57.692 37.500 37.43 22.70 37.82 4.06
5589 6332 5.824097 TCACTTCTTATGTATGCATGCATGT 59.176 36.000 37.43 25.68 37.82 3.21
5590 6333 6.991531 TCACTTCTTATGTATGCATGCATGTA 59.008 34.615 37.43 26.86 37.82 2.29
5591 6334 7.662669 TCACTTCTTATGTATGCATGCATGTAT 59.337 33.333 37.43 30.35 37.82 2.29
5592 6335 7.749126 CACTTCTTATGTATGCATGCATGTATG 59.251 37.037 37.43 26.08 37.82 2.39
5593 6336 7.662669 ACTTCTTATGTATGCATGCATGTATGA 59.337 33.333 37.43 27.41 37.82 2.15
5594 6337 7.605410 TCTTATGTATGCATGCATGTATGAG 57.395 36.000 37.43 31.09 37.82 2.90
5595 6338 7.163441 TCTTATGTATGCATGCATGTATGAGT 58.837 34.615 37.43 21.65 37.82 3.41
5596 6339 5.622770 ATGTATGCATGCATGTATGAGTG 57.377 39.130 37.43 7.86 37.82 3.51
5597 6340 4.453751 TGTATGCATGCATGTATGAGTGT 58.546 39.130 37.43 15.10 37.82 3.55
5598 6341 4.512571 TGTATGCATGCATGTATGAGTGTC 59.487 41.667 37.43 18.28 37.82 3.67
5599 6342 3.271055 TGCATGCATGTATGAGTGTCT 57.729 42.857 25.73 0.00 0.00 3.41
5600 6343 4.405116 TGCATGCATGTATGAGTGTCTA 57.595 40.909 25.73 1.64 0.00 2.59
5601 6344 4.964593 TGCATGCATGTATGAGTGTCTAT 58.035 39.130 25.73 0.00 0.00 1.98
5602 6345 4.753107 TGCATGCATGTATGAGTGTCTATG 59.247 41.667 25.73 0.00 0.00 2.23
5603 6346 4.753610 GCATGCATGTATGAGTGTCTATGT 59.246 41.667 25.73 0.00 0.00 2.29
5604 6347 5.237996 GCATGCATGTATGAGTGTCTATGTT 59.762 40.000 25.73 0.00 0.00 2.71
5605 6348 6.424812 GCATGCATGTATGAGTGTCTATGTTA 59.575 38.462 25.73 0.00 0.00 2.41
5606 6349 7.041848 GCATGCATGTATGAGTGTCTATGTTAA 60.042 37.037 25.73 0.00 0.00 2.01
5607 6350 8.829612 CATGCATGTATGAGTGTCTATGTTAAA 58.170 33.333 17.96 0.00 0.00 1.52
5608 6351 8.785329 TGCATGTATGAGTGTCTATGTTAAAA 57.215 30.769 0.00 0.00 0.00 1.52
5609 6352 9.225436 TGCATGTATGAGTGTCTATGTTAAAAA 57.775 29.630 0.00 0.00 0.00 1.94
5645 6388 9.713713 AGAGAGAAGAAAGTAAAATAGTGAACC 57.286 33.333 0.00 0.00 0.00 3.62
5646 6389 9.490379 GAGAGAAGAAAGTAAAATAGTGAACCA 57.510 33.333 0.00 0.00 0.00 3.67
5654 6397 9.802039 AAAGTAAAATAGTGAACCATAGTTGGA 57.198 29.630 0.00 0.00 46.92 3.53
5655 6398 9.975218 AAGTAAAATAGTGAACCATAGTTGGAT 57.025 29.630 0.00 0.00 46.92 3.41
5656 6399 9.975218 AGTAAAATAGTGAACCATAGTTGGATT 57.025 29.630 0.00 0.00 46.92 3.01
5658 6401 8.650143 AAAATAGTGAACCATAGTTGGATTGT 57.350 30.769 0.00 0.00 46.92 2.71
5659 6402 8.650143 AAATAGTGAACCATAGTTGGATTGTT 57.350 30.769 0.00 0.00 46.92 2.83
5660 6403 9.747898 AAATAGTGAACCATAGTTGGATTGTTA 57.252 29.630 0.00 0.00 46.92 2.41
5661 6404 8.964476 ATAGTGAACCATAGTTGGATTGTTAG 57.036 34.615 0.00 0.00 46.92 2.34
5662 6405 6.180472 AGTGAACCATAGTTGGATTGTTAGG 58.820 40.000 0.00 0.00 46.92 2.69
5663 6406 5.944007 GTGAACCATAGTTGGATTGTTAGGT 59.056 40.000 0.00 0.00 46.92 3.08
5664 6407 5.943416 TGAACCATAGTTGGATTGTTAGGTG 59.057 40.000 0.00 0.00 46.92 4.00
5665 6408 4.855340 ACCATAGTTGGATTGTTAGGTGG 58.145 43.478 0.00 0.00 46.92 4.61
5666 6409 4.538490 ACCATAGTTGGATTGTTAGGTGGA 59.462 41.667 0.00 0.00 46.92 4.02
5667 6410 5.014755 ACCATAGTTGGATTGTTAGGTGGAA 59.985 40.000 0.00 0.00 46.92 3.53
5668 6411 5.949354 CCATAGTTGGATTGTTAGGTGGAAA 59.051 40.000 0.00 0.00 46.92 3.13
5669 6412 6.095440 CCATAGTTGGATTGTTAGGTGGAAAG 59.905 42.308 0.00 0.00 46.92 2.62
5670 6413 5.061721 AGTTGGATTGTTAGGTGGAAAGT 57.938 39.130 0.00 0.00 0.00 2.66
5671 6414 4.827284 AGTTGGATTGTTAGGTGGAAAGTG 59.173 41.667 0.00 0.00 0.00 3.16
5672 6415 3.761897 TGGATTGTTAGGTGGAAAGTGG 58.238 45.455 0.00 0.00 0.00 4.00
5673 6416 3.139397 TGGATTGTTAGGTGGAAAGTGGT 59.861 43.478 0.00 0.00 0.00 4.16
5674 6417 4.351407 TGGATTGTTAGGTGGAAAGTGGTA 59.649 41.667 0.00 0.00 0.00 3.25
5675 6418 5.014755 TGGATTGTTAGGTGGAAAGTGGTAT 59.985 40.000 0.00 0.00 0.00 2.73
5676 6419 5.949952 GGATTGTTAGGTGGAAAGTGGTATT 59.050 40.000 0.00 0.00 0.00 1.89
5677 6420 6.095021 GGATTGTTAGGTGGAAAGTGGTATTC 59.905 42.308 0.00 0.00 0.00 1.75
5678 6421 5.836024 TGTTAGGTGGAAAGTGGTATTCT 57.164 39.130 0.00 0.00 0.00 2.40
5679 6422 5.801380 TGTTAGGTGGAAAGTGGTATTCTC 58.199 41.667 0.00 0.00 0.00 2.87
5680 6423 5.308497 TGTTAGGTGGAAAGTGGTATTCTCA 59.692 40.000 0.00 0.00 0.00 3.27
5681 6424 4.559862 AGGTGGAAAGTGGTATTCTCAG 57.440 45.455 0.00 0.00 0.00 3.35
5682 6425 3.010420 GGTGGAAAGTGGTATTCTCAGC 58.990 50.000 0.00 0.00 0.00 4.26
5683 6426 3.010420 GTGGAAAGTGGTATTCTCAGCC 58.990 50.000 0.00 0.00 0.00 4.85
5684 6427 2.026262 TGGAAAGTGGTATTCTCAGCCC 60.026 50.000 0.00 0.00 0.00 5.19
5685 6428 2.026262 GGAAAGTGGTATTCTCAGCCCA 60.026 50.000 0.00 0.00 0.00 5.36
5686 6429 3.372025 GGAAAGTGGTATTCTCAGCCCAT 60.372 47.826 0.00 0.00 0.00 4.00
5687 6430 3.567478 AAGTGGTATTCTCAGCCCATC 57.433 47.619 0.00 0.00 0.00 3.51
5688 6431 2.481441 AGTGGTATTCTCAGCCCATCA 58.519 47.619 0.00 0.00 0.00 3.07
5689 6432 2.171448 AGTGGTATTCTCAGCCCATCAC 59.829 50.000 0.00 0.00 0.00 3.06
5690 6433 1.138859 TGGTATTCTCAGCCCATCACG 59.861 52.381 0.00 0.00 0.00 4.35
5691 6434 1.221414 GTATTCTCAGCCCATCACGC 58.779 55.000 0.00 0.00 0.00 5.34
5692 6435 1.123077 TATTCTCAGCCCATCACGCT 58.877 50.000 0.00 0.00 36.91 5.07
5693 6436 0.254178 ATTCTCAGCCCATCACGCTT 59.746 50.000 0.00 0.00 33.17 4.68
5694 6437 0.036732 TTCTCAGCCCATCACGCTTT 59.963 50.000 0.00 0.00 33.17 3.51
5695 6438 0.901827 TCTCAGCCCATCACGCTTTA 59.098 50.000 0.00 0.00 33.17 1.85
5696 6439 1.277842 TCTCAGCCCATCACGCTTTAA 59.722 47.619 0.00 0.00 33.17 1.52
5697 6440 1.667724 CTCAGCCCATCACGCTTTAAG 59.332 52.381 0.00 0.00 33.17 1.85
5698 6441 1.003118 TCAGCCCATCACGCTTTAAGT 59.997 47.619 0.00 0.00 33.17 2.24
5699 6442 1.812571 CAGCCCATCACGCTTTAAGTT 59.187 47.619 0.00 0.00 33.17 2.66
5700 6443 2.228822 CAGCCCATCACGCTTTAAGTTT 59.771 45.455 0.00 0.00 33.17 2.66
5701 6444 2.890945 AGCCCATCACGCTTTAAGTTTT 59.109 40.909 0.00 0.00 30.57 2.43
5702 6445 2.986479 GCCCATCACGCTTTAAGTTTTG 59.014 45.455 0.00 0.00 0.00 2.44
5703 6446 3.574614 CCCATCACGCTTTAAGTTTTGG 58.425 45.455 0.00 0.00 0.00 3.28
5704 6447 3.005367 CCCATCACGCTTTAAGTTTTGGT 59.995 43.478 0.00 0.00 0.00 3.67
5705 6448 3.980775 CCATCACGCTTTAAGTTTTGGTG 59.019 43.478 0.00 0.00 0.00 4.17
5706 6449 3.073144 TCACGCTTTAAGTTTTGGTGC 57.927 42.857 0.00 0.00 0.00 5.01
5707 6450 2.685897 TCACGCTTTAAGTTTTGGTGCT 59.314 40.909 0.00 0.00 0.00 4.40
5708 6451 3.042887 CACGCTTTAAGTTTTGGTGCTC 58.957 45.455 0.00 0.00 0.00 4.26
5709 6452 2.286772 ACGCTTTAAGTTTTGGTGCTCG 60.287 45.455 0.00 0.00 0.00 5.03
5710 6453 2.051423 GCTTTAAGTTTTGGTGCTCGC 58.949 47.619 0.00 0.00 0.00 5.03
5711 6454 2.542824 GCTTTAAGTTTTGGTGCTCGCA 60.543 45.455 0.00 0.00 0.00 5.10
5712 6455 3.857010 GCTTTAAGTTTTGGTGCTCGCAT 60.857 43.478 0.00 0.00 0.00 4.73
5713 6456 4.298332 CTTTAAGTTTTGGTGCTCGCATT 58.702 39.130 0.00 0.00 0.00 3.56
5714 6457 5.440234 TTTAAGTTTTGGTGCTCGCATTA 57.560 34.783 0.00 0.00 0.00 1.90
5715 6458 5.637006 TTAAGTTTTGGTGCTCGCATTAT 57.363 34.783 0.00 0.00 0.00 1.28
5716 6459 3.764885 AGTTTTGGTGCTCGCATTATC 57.235 42.857 0.00 0.00 0.00 1.75
5717 6460 2.423538 AGTTTTGGTGCTCGCATTATCC 59.576 45.455 0.00 0.00 0.00 2.59
5718 6461 2.418368 TTTGGTGCTCGCATTATCCT 57.582 45.000 0.00 0.00 0.00 3.24
5719 6462 1.667236 TTGGTGCTCGCATTATCCTG 58.333 50.000 0.00 0.00 0.00 3.86
5720 6463 0.829990 TGGTGCTCGCATTATCCTGA 59.170 50.000 0.00 0.00 0.00 3.86
5721 6464 1.209261 TGGTGCTCGCATTATCCTGAA 59.791 47.619 0.00 0.00 0.00 3.02
5722 6465 2.158769 TGGTGCTCGCATTATCCTGAAT 60.159 45.455 0.00 0.00 0.00 2.57
5723 6466 2.880890 GGTGCTCGCATTATCCTGAATT 59.119 45.455 0.00 0.00 0.00 2.17
5724 6467 3.316308 GGTGCTCGCATTATCCTGAATTT 59.684 43.478 0.00 0.00 0.00 1.82
5725 6468 4.515191 GGTGCTCGCATTATCCTGAATTTA 59.485 41.667 0.00 0.00 0.00 1.40
5726 6469 5.182001 GGTGCTCGCATTATCCTGAATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
5727 6470 6.294176 GGTGCTCGCATTATCCTGAATTTATT 60.294 38.462 0.00 0.00 0.00 1.40
5728 6471 7.141363 GTGCTCGCATTATCCTGAATTTATTT 58.859 34.615 0.00 0.00 0.00 1.40
5729 6472 7.649306 GTGCTCGCATTATCCTGAATTTATTTT 59.351 33.333 0.00 0.00 0.00 1.82
5730 6473 8.845227 TGCTCGCATTATCCTGAATTTATTTTA 58.155 29.630 0.00 0.00 0.00 1.52
5731 6474 9.334693 GCTCGCATTATCCTGAATTTATTTTAG 57.665 33.333 0.00 0.00 0.00 1.85
5747 6490 7.870665 TTATTTTAGAATTTTCGACGATGCG 57.129 32.000 0.00 0.00 0.00 4.73
5748 6491 2.990774 TAGAATTTTCGACGATGCGC 57.009 45.000 0.00 0.00 0.00 6.09
5759 6502 3.939171 CGATGCGCGTTTAGTGAAA 57.061 47.368 8.43 0.00 34.64 2.69
5760 6503 2.220315 CGATGCGCGTTTAGTGAAAA 57.780 45.000 8.43 0.00 34.64 2.29
5761 6504 2.158143 CGATGCGCGTTTAGTGAAAAG 58.842 47.619 8.43 0.00 34.64 2.27
5762 6505 2.159894 CGATGCGCGTTTAGTGAAAAGA 60.160 45.455 8.43 0.00 34.64 2.52
5763 6506 2.941891 TGCGCGTTTAGTGAAAAGAG 57.058 45.000 8.43 0.00 0.00 2.85
5764 6507 2.475818 TGCGCGTTTAGTGAAAAGAGA 58.524 42.857 8.43 0.00 0.00 3.10
5765 6508 2.220133 TGCGCGTTTAGTGAAAAGAGAC 59.780 45.455 8.43 0.00 0.00 3.36
5766 6509 2.220133 GCGCGTTTAGTGAAAAGAGACA 59.780 45.455 8.43 0.00 0.00 3.41
5767 6510 3.120649 GCGCGTTTAGTGAAAAGAGACAT 60.121 43.478 8.43 0.00 0.00 3.06
5768 6511 4.610680 GCGCGTTTAGTGAAAAGAGACATT 60.611 41.667 8.43 0.00 0.00 2.71
5769 6512 5.073478 CGCGTTTAGTGAAAAGAGACATTC 58.927 41.667 0.00 0.00 0.00 2.67
5770 6513 5.333035 CGCGTTTAGTGAAAAGAGACATTCA 60.333 40.000 0.00 0.00 33.37 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.195940 CCACCTTTTGACCATCTCATGTAT 58.804 41.667 0.00 0.00 0.00 2.29
45 46 5.250982 CCCGTCTTCTAATAAAACCACCTT 58.749 41.667 0.00 0.00 0.00 3.50
47 48 3.943381 CCCCGTCTTCTAATAAAACCACC 59.057 47.826 0.00 0.00 0.00 4.61
48 49 3.943381 CCCCCGTCTTCTAATAAAACCAC 59.057 47.826 0.00 0.00 0.00 4.16
49 50 3.845398 TCCCCCGTCTTCTAATAAAACCA 59.155 43.478 0.00 0.00 0.00 3.67
51 52 6.207221 TGTTTTCCCCCGTCTTCTAATAAAAC 59.793 38.462 0.00 0.00 35.76 2.43
53 54 5.706833 GTGTTTTCCCCCGTCTTCTAATAAA 59.293 40.000 0.00 0.00 0.00 1.40
54 55 5.221884 TGTGTTTTCCCCCGTCTTCTAATAA 60.222 40.000 0.00 0.00 0.00 1.40
56 57 3.073356 TGTGTTTTCCCCCGTCTTCTAAT 59.927 43.478 0.00 0.00 0.00 1.73
57 58 2.438763 TGTGTTTTCCCCCGTCTTCTAA 59.561 45.455 0.00 0.00 0.00 2.10
60 61 0.949397 GTGTGTTTTCCCCCGTCTTC 59.051 55.000 0.00 0.00 0.00 2.87
61 62 0.256464 TGTGTGTTTTCCCCCGTCTT 59.744 50.000 0.00 0.00 0.00 3.01
65 66 1.730451 GGTGTGTGTGTTTTCCCCCG 61.730 60.000 0.00 0.00 0.00 5.73
67 68 2.351706 TAGGTGTGTGTGTTTTCCCC 57.648 50.000 0.00 0.00 0.00 4.81
68 69 3.252458 GTCATAGGTGTGTGTGTTTTCCC 59.748 47.826 0.00 0.00 0.00 3.97
70 71 6.854496 TTAGTCATAGGTGTGTGTGTTTTC 57.146 37.500 0.00 0.00 0.00 2.29
75 76 4.032900 GCGATTTAGTCATAGGTGTGTGTG 59.967 45.833 0.00 0.00 0.00 3.82
104 112 0.947960 TTGAAGGCGTTTGATGCGAA 59.052 45.000 0.00 0.00 0.00 4.70
116 124 1.803555 GTGCACTCTCTTCTTGAAGGC 59.196 52.381 10.32 6.18 0.00 4.35
124 132 0.985549 CGTAAGCGTGCACTCTCTTC 59.014 55.000 16.19 5.65 0.00 2.87
165 173 5.989168 TCAAGTTTATTGAGAGTTGCTTCGA 59.011 36.000 0.00 0.00 0.00 3.71
167 175 8.038492 AGATCAAGTTTATTGAGAGTTGCTTC 57.962 34.615 0.00 0.00 0.00 3.86
194 202 8.813282 CACAAACACAAAAGGGTTAGAAATAAC 58.187 33.333 0.00 0.00 0.00 1.89
195 203 7.492994 GCACAAACACAAAAGGGTTAGAAATAA 59.507 33.333 0.00 0.00 0.00 1.40
203 211 2.003196 CGCACAAACACAAAAGGGTT 57.997 45.000 0.00 0.00 0.00 4.11
209 217 3.511699 TGTTTATGCGCACAAACACAAA 58.488 36.364 35.80 18.50 39.16 2.83
215 223 2.976509 CAACGATGTTTATGCGCACAAA 59.023 40.909 14.90 12.35 0.00 2.83
222 230 3.171277 GGAGTTGCAACGATGTTTATGC 58.829 45.455 23.21 5.49 39.22 3.14
231 239 3.304123 CCGTAAAAATGGAGTTGCAACGA 60.304 43.478 23.21 12.15 0.00 3.85
253 261 2.677003 ATGGCGCGTGTTAGTGTGC 61.677 57.895 8.43 0.00 40.76 4.57
256 264 2.098298 GCATGGCGCGTGTTAGTG 59.902 61.111 8.43 0.00 0.00 2.74
267 275 1.548986 GTTTCATAGCAACGCATGGC 58.451 50.000 0.00 0.00 0.00 4.40
268 276 1.472082 TGGTTTCATAGCAACGCATGG 59.528 47.619 0.00 0.00 0.00 3.66
269 277 2.095314 TGTGGTTTCATAGCAACGCATG 60.095 45.455 0.00 0.00 35.72 4.06
270 278 2.158559 TGTGGTTTCATAGCAACGCAT 58.841 42.857 0.00 0.00 35.72 4.73
287 295 9.520204 GATCCAATACCATTAGTCATTTTTGTG 57.480 33.333 0.00 0.00 0.00 3.33
320 328 8.535335 TGTGCATTGGTTATTTGGTTGTTATAT 58.465 29.630 0.00 0.00 0.00 0.86
323 331 6.161855 TGTGCATTGGTTATTTGGTTGTTA 57.838 33.333 0.00 0.00 0.00 2.41
324 332 5.028549 TGTGCATTGGTTATTTGGTTGTT 57.971 34.783 0.00 0.00 0.00 2.83
326 334 4.142859 GCATGTGCATTGGTTATTTGGTTG 60.143 41.667 0.00 0.00 41.59 3.77
328 336 3.598299 GCATGTGCATTGGTTATTTGGT 58.402 40.909 0.00 0.00 41.59 3.67
356 364 5.285607 CGCTTGATTGATTTTCTTTCTCTGC 59.714 40.000 0.00 0.00 0.00 4.26
364 372 6.506500 ACTTCATCGCTTGATTGATTTTCT 57.493 33.333 0.00 0.00 33.34 2.52
365 373 5.450385 CGACTTCATCGCTTGATTGATTTTC 59.550 40.000 0.00 0.00 45.52 2.29
366 374 5.327091 CGACTTCATCGCTTGATTGATTTT 58.673 37.500 0.00 0.00 45.52 1.82
367 375 4.901814 CGACTTCATCGCTTGATTGATTT 58.098 39.130 0.00 0.00 45.52 2.17
368 376 4.526970 CGACTTCATCGCTTGATTGATT 57.473 40.909 0.00 0.00 45.52 2.57
380 388 1.522569 CACCCCTCCCGACTTCATC 59.477 63.158 0.00 0.00 0.00 2.92
381 389 1.995626 CCACCCCTCCCGACTTCAT 60.996 63.158 0.00 0.00 0.00 2.57
382 390 2.606519 CCACCCCTCCCGACTTCA 60.607 66.667 0.00 0.00 0.00 3.02
383 391 3.400054 CCCACCCCTCCCGACTTC 61.400 72.222 0.00 0.00 0.00 3.01
418 426 4.452733 CTCGCTCCCCCGTTGGAC 62.453 72.222 0.00 0.00 35.39 4.02
421 429 4.821589 GAGCTCGCTCCCCCGTTG 62.822 72.222 7.68 0.00 37.11 4.10
426 434 4.459089 GTGGTGAGCTCGCTCCCC 62.459 72.222 25.54 14.14 42.09 4.81
427 435 4.459089 GGTGGTGAGCTCGCTCCC 62.459 72.222 25.54 20.43 42.09 4.30
428 436 3.695606 TGGTGGTGAGCTCGCTCC 61.696 66.667 25.54 24.87 42.09 4.70
429 437 2.433318 GTGGTGGTGAGCTCGCTC 60.433 66.667 25.54 18.04 43.01 5.03
430 438 4.008933 GGTGGTGGTGAGCTCGCT 62.009 66.667 25.54 0.00 0.00 4.93
431 439 3.825160 TTGGTGGTGGTGAGCTCGC 62.825 63.158 19.20 19.20 0.00 5.03
432 440 1.961277 GTTGGTGGTGGTGAGCTCG 60.961 63.158 9.64 0.00 0.00 5.03
433 441 0.465460 TTGTTGGTGGTGGTGAGCTC 60.465 55.000 6.82 6.82 0.00 4.09
434 442 0.751643 GTTGTTGGTGGTGGTGAGCT 60.752 55.000 0.00 0.00 0.00 4.09
435 443 0.751643 AGTTGTTGGTGGTGGTGAGC 60.752 55.000 0.00 0.00 0.00 4.26
436 444 1.308998 GAGTTGTTGGTGGTGGTGAG 58.691 55.000 0.00 0.00 0.00 3.51
437 445 0.106918 GGAGTTGTTGGTGGTGGTGA 60.107 55.000 0.00 0.00 0.00 4.02
438 446 0.395036 TGGAGTTGTTGGTGGTGGTG 60.395 55.000 0.00 0.00 0.00 4.17
439 447 0.333312 TTGGAGTTGTTGGTGGTGGT 59.667 50.000 0.00 0.00 0.00 4.16
440 448 1.479709 TTTGGAGTTGTTGGTGGTGG 58.520 50.000 0.00 0.00 0.00 4.61
441 449 3.817709 AATTTGGAGTTGTTGGTGGTG 57.182 42.857 0.00 0.00 0.00 4.17
442 450 4.542697 ACTAATTTGGAGTTGTTGGTGGT 58.457 39.130 0.00 0.00 0.00 4.16
443 451 5.183140 CCTACTAATTTGGAGTTGTTGGTGG 59.817 44.000 0.00 0.00 0.00 4.61
444 452 5.183140 CCCTACTAATTTGGAGTTGTTGGTG 59.817 44.000 0.00 0.00 0.00 4.17
445 453 5.073965 TCCCTACTAATTTGGAGTTGTTGGT 59.926 40.000 0.00 0.00 0.00 3.67
446 454 5.566469 TCCCTACTAATTTGGAGTTGTTGG 58.434 41.667 0.00 0.00 0.00 3.77
447 455 7.703058 AATCCCTACTAATTTGGAGTTGTTG 57.297 36.000 0.00 0.00 0.00 3.33
448 456 9.990868 ATTAATCCCTACTAATTTGGAGTTGTT 57.009 29.630 0.00 0.00 0.00 2.83
449 457 9.990868 AATTAATCCCTACTAATTTGGAGTTGT 57.009 29.630 0.00 0.00 0.00 3.32
574 591 9.744468 GCTAACCTTGTTTTGAATTTCTCTAAA 57.256 29.630 0.00 0.00 0.00 1.85
575 592 8.908903 TGCTAACCTTGTTTTGAATTTCTCTAA 58.091 29.630 0.00 0.00 0.00 2.10
576 593 8.458573 TGCTAACCTTGTTTTGAATTTCTCTA 57.541 30.769 0.00 0.00 0.00 2.43
577 594 7.346751 TGCTAACCTTGTTTTGAATTTCTCT 57.653 32.000 0.00 0.00 0.00 3.10
578 595 7.491048 TGTTGCTAACCTTGTTTTGAATTTCTC 59.509 33.333 0.00 0.00 0.00 2.87
579 596 7.327214 TGTTGCTAACCTTGTTTTGAATTTCT 58.673 30.769 0.00 0.00 0.00 2.52
580 597 7.532682 TGTTGCTAACCTTGTTTTGAATTTC 57.467 32.000 0.00 0.00 0.00 2.17
581 598 7.913674 TTGTTGCTAACCTTGTTTTGAATTT 57.086 28.000 0.00 0.00 0.00 1.82
582 599 7.913674 TTTGTTGCTAACCTTGTTTTGAATT 57.086 28.000 0.00 0.00 0.00 2.17
583 600 7.012232 CCATTTGTTGCTAACCTTGTTTTGAAT 59.988 33.333 0.00 0.00 0.00 2.57
584 601 6.314896 CCATTTGTTGCTAACCTTGTTTTGAA 59.685 34.615 0.00 0.00 0.00 2.69
585 602 5.814705 CCATTTGTTGCTAACCTTGTTTTGA 59.185 36.000 0.00 0.00 0.00 2.69
586 603 5.007528 CCCATTTGTTGCTAACCTTGTTTTG 59.992 40.000 0.00 0.00 0.00 2.44
587 604 5.104735 TCCCATTTGTTGCTAACCTTGTTTT 60.105 36.000 0.00 0.00 0.00 2.43
588 605 4.407296 TCCCATTTGTTGCTAACCTTGTTT 59.593 37.500 0.00 0.00 0.00 2.83
589 606 3.964031 TCCCATTTGTTGCTAACCTTGTT 59.036 39.130 0.00 0.00 0.00 2.83
590 607 3.320826 GTCCCATTTGTTGCTAACCTTGT 59.679 43.478 0.00 0.00 0.00 3.16
591 608 3.573967 AGTCCCATTTGTTGCTAACCTTG 59.426 43.478 0.00 0.00 0.00 3.61
592 609 3.573967 CAGTCCCATTTGTTGCTAACCTT 59.426 43.478 0.00 0.00 0.00 3.50
593 610 3.157087 CAGTCCCATTTGTTGCTAACCT 58.843 45.455 0.00 0.00 0.00 3.50
594 611 3.057526 GTCAGTCCCATTTGTTGCTAACC 60.058 47.826 0.00 0.00 0.00 2.85
595 612 3.057526 GGTCAGTCCCATTTGTTGCTAAC 60.058 47.826 0.00 0.00 0.00 2.34
596 613 3.153919 GGTCAGTCCCATTTGTTGCTAA 58.846 45.455 0.00 0.00 0.00 3.09
609 626 3.311110 TCTGCGGGTGGTCAGTCC 61.311 66.667 0.00 0.00 0.00 3.85
710 730 8.926092 AACTAGGCAGTTTCTTTTTCTAATCT 57.074 30.769 0.00 0.00 42.51 2.40
744 764 5.047235 GCAGATCGGTCCAGGTTATTATAGT 60.047 44.000 0.00 0.00 0.00 2.12
768 788 1.668419 CTGGAGCTTCCCCGTTATTG 58.332 55.000 0.00 0.00 35.03 1.90
947 969 2.253403 GAGGAACTAGCCCAACCCCG 62.253 65.000 4.78 0.00 41.55 5.73
952 974 3.408634 CGAAAAAGAGGAACTAGCCCAA 58.591 45.455 4.78 0.00 41.55 4.12
953 975 2.290071 CCGAAAAAGAGGAACTAGCCCA 60.290 50.000 4.78 0.00 41.55 5.36
956 978 1.393883 CGCCGAAAAAGAGGAACTAGC 59.606 52.381 0.00 0.00 41.55 3.42
958 980 1.338389 CCCGCCGAAAAAGAGGAACTA 60.338 52.381 0.00 0.00 41.55 2.24
1076 1098 5.278266 CGAGGAAGAAAGATAGAGGTAGCAG 60.278 48.000 0.00 0.00 0.00 4.24
1125 1147 4.642424 GCGATACTAGCGGAAATTAACC 57.358 45.455 0.00 0.00 0.00 2.85
1181 1203 1.134189 CCCGTACCTTTCAATCCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
1204 1226 2.279120 CGAGGTCGCATCTCCAGC 60.279 66.667 0.00 0.00 0.00 4.85
1244 1266 5.478233 TCGAAATCAAACCATATGAACCG 57.522 39.130 3.65 0.00 0.00 4.44
1301 1323 0.481128 AAAAGCCCTTTCCCTTCGGA 59.519 50.000 0.00 0.00 35.88 4.55
1304 1326 1.895798 CCAGAAAAGCCCTTTCCCTTC 59.104 52.381 5.48 0.00 43.98 3.46
1336 1358 9.581289 TCTTCAGGAGTAACAAAATATTTGGAA 57.419 29.630 9.65 0.00 0.00 3.53
1337 1359 9.753674 ATCTTCAGGAGTAACAAAATATTTGGA 57.246 29.630 9.65 0.00 0.00 3.53
1343 1365 9.793259 AGTGAAATCTTCAGGAGTAACAAAATA 57.207 29.630 0.00 0.00 41.01 1.40
1355 1377 6.593382 CAGGAGAACTTAGTGAAATCTTCAGG 59.407 42.308 0.00 0.00 41.01 3.86
1356 1378 7.382110 TCAGGAGAACTTAGTGAAATCTTCAG 58.618 38.462 0.00 0.00 41.01 3.02
1357 1379 7.303182 TCAGGAGAACTTAGTGAAATCTTCA 57.697 36.000 0.00 0.00 37.33 3.02
1358 1380 7.875554 ACTTCAGGAGAACTTAGTGAAATCTTC 59.124 37.037 0.00 0.00 0.00 2.87
1359 1381 7.740805 ACTTCAGGAGAACTTAGTGAAATCTT 58.259 34.615 0.00 0.00 0.00 2.40
1360 1382 7.309770 ACTTCAGGAGAACTTAGTGAAATCT 57.690 36.000 0.00 0.00 0.00 2.40
1361 1383 7.442666 ACAACTTCAGGAGAACTTAGTGAAATC 59.557 37.037 0.00 0.00 0.00 2.17
1394 1434 5.827797 ACAAGCAGACAAGGTTAATTCTGAA 59.172 36.000 1.64 0.00 38.19 3.02
1410 1451 4.537135 AGAACCGAAATCTACAAGCAGA 57.463 40.909 0.00 0.00 0.00 4.26
1425 1466 0.521735 GCAACTAGCCCAAAGAACCG 59.478 55.000 0.00 0.00 37.23 4.44
1446 1488 5.475220 TCTGAACAAGAAACCAGACAAACAA 59.525 36.000 0.00 0.00 31.45 2.83
1497 1543 7.120923 AGAGAACCGCCTAACTATGATTTAA 57.879 36.000 0.00 0.00 0.00 1.52
1548 1595 8.934023 AACTCCAATTGGACTAATAACAAAGA 57.066 30.769 23.63 0.00 39.78 2.52
1549 1596 9.410556 CAAACTCCAATTGGACTAATAACAAAG 57.589 33.333 23.63 11.26 39.78 2.77
1581 1628 3.512033 AGCTAGTCGATGTGAAAGGAC 57.488 47.619 0.00 0.00 0.00 3.85
1625 1672 7.660617 GGAGGCACCCTAAAATAATACTAGTTC 59.339 40.741 0.00 0.00 31.76 3.01
1628 1675 7.162082 CAGGAGGCACCCTAAAATAATACTAG 58.838 42.308 0.00 0.00 40.05 2.57
1630 1677 5.432060 ACAGGAGGCACCCTAAAATAATACT 59.568 40.000 0.00 0.00 40.05 2.12
1657 1704 0.042731 AGGTAGGTAGAGGCCAGCAA 59.957 55.000 5.01 0.00 0.00 3.91
1702 1749 0.462047 GCCCACATACAGAACGAGGG 60.462 60.000 0.00 0.00 37.87 4.30
1833 1883 3.916989 AGGAAAAGGGACAGTTAGGACAT 59.083 43.478 0.00 0.00 0.00 3.06
1845 1895 7.294584 TGAAGAAAACTTCATAGGAAAAGGGA 58.705 34.615 8.32 0.00 38.30 4.20
1874 1924 5.105797 CCAACTAAGCAAAGTGATATGGCAA 60.106 40.000 0.00 0.00 0.00 4.52
2014 2065 3.056821 TCCTCAGAACTATGACAACACCG 60.057 47.826 0.00 0.00 0.00 4.94
2034 2085 2.292267 CAATACACTGGCCACTGATCC 58.708 52.381 18.10 0.00 0.00 3.36
2092 2150 4.572909 ACCTAAGGATTGACGGTTTGTAC 58.427 43.478 0.00 0.00 0.00 2.90
2103 2161 9.736023 GCAAACATATAAGAAACCTAAGGATTG 57.264 33.333 0.00 0.00 0.00 2.67
2104 2162 9.474313 TGCAAACATATAAGAAACCTAAGGATT 57.526 29.630 0.00 0.00 0.00 3.01
2112 2170 8.243426 TCTTCATGTGCAAACATATAAGAAACC 58.757 33.333 10.84 0.00 32.83 3.27
2183 2241 6.095021 TGCTAGACATACTTGTTCGTCTACAT 59.905 38.462 0.00 0.00 39.39 2.29
2254 2312 3.825014 AGAACTTCAAATGCAGTGCAGAT 59.175 39.130 24.20 12.13 43.65 2.90
2322 2380 2.239907 AGTCCACTAATCCTTTGGCCTC 59.760 50.000 3.32 0.00 0.00 4.70
2362 2427 2.360801 TGGCCTTTTCTTGTTGTACAGC 59.639 45.455 3.32 2.25 0.00 4.40
2363 2428 4.647424 TTGGCCTTTTCTTGTTGTACAG 57.353 40.909 3.32 0.00 0.00 2.74
2469 2534 2.173569 ACTTTGTCTGAAGGAGGCTTGT 59.826 45.455 0.00 0.00 0.00 3.16
2482 2547 2.420022 GTGTGTGACAGCAACTTTGTCT 59.580 45.455 6.89 0.00 44.08 3.41
2719 2788 5.946377 AGTTGGCAAGGTCCTAATAAGAAAG 59.054 40.000 0.00 0.00 0.00 2.62
2731 2800 3.883489 ACTAAAACTGAGTTGGCAAGGTC 59.117 43.478 0.00 0.85 0.00 3.85
2781 2850 8.746922 TGAAGCAAAGATTATGAAATCACAAC 57.253 30.769 1.35 0.00 43.44 3.32
2783 2852 9.932207 AATTGAAGCAAAGATTATGAAATCACA 57.068 25.926 1.35 0.00 43.44 3.58
2972 3148 2.479566 ACACAGCAACAGATACAGGG 57.520 50.000 0.00 0.00 0.00 4.45
3076 3252 5.972382 GCACATTTAAAACAGTTACGGACAA 59.028 36.000 0.00 0.00 0.00 3.18
3081 3257 5.398122 CAGGTGCACATTTAAAACAGTTACG 59.602 40.000 20.43 0.00 0.00 3.18
3117 3293 5.182950 CAGTGTAGTGGATAGAGCCATAGAG 59.817 48.000 0.00 0.00 40.68 2.43
3229 3405 1.302271 CAGCAGTGAAGCAGCCTCA 60.302 57.895 0.00 0.00 36.85 3.86
3238 3414 5.472148 CAAAAATTATGGAGCAGCAGTGAA 58.528 37.500 0.00 0.00 0.00 3.18
3356 3533 9.638176 ACAGATAGAAATTTTCCTGATAAGCAT 57.362 29.630 16.11 0.00 0.00 3.79
3357 3534 9.466497 AACAGATAGAAATTTTCCTGATAAGCA 57.534 29.630 16.11 0.00 0.00 3.91
3632 3813 3.198068 AGTAAGAATGTATGCACCAGCG 58.802 45.455 0.00 0.00 46.23 5.18
3692 3873 5.069251 AGCTATTAGTAGTGCAACCAGTAGG 59.931 44.000 0.00 0.00 37.80 3.18
3695 3876 6.732896 ATAGCTATTAGTAGTGCAACCAGT 57.267 37.500 0.00 0.00 37.80 4.00
3757 3938 4.401837 GGTGAAACGAGGATAAGACCTAGT 59.598 45.833 0.00 0.00 45.16 2.57
3842 4023 8.202137 TGTAAGACAAAATATGGTACTAGAGGC 58.798 37.037 0.00 0.00 0.00 4.70
3932 4114 4.133820 ACAACAAATTCGACATCACCTGA 58.866 39.130 0.00 0.00 0.00 3.86
4001 4183 7.551617 TCTTAGCTTATTACCTTGCCAAAGTAC 59.448 37.037 0.00 0.00 0.00 2.73
4061 4245 6.114187 AGTGTTCAAGATCACATGGTCTAA 57.886 37.500 12.33 0.00 37.07 2.10
4091 4275 5.415221 CACTCTCTGTGGATTAGAAGTTCC 58.585 45.833 0.00 0.00 42.68 3.62
4127 4311 7.548427 CTGCATAATATCAGATTCTGGTACAGG 59.452 40.741 13.59 5.90 43.94 4.00
4236 4421 7.856145 AACTTCATGAATTAAGACAGGCTAG 57.144 36.000 8.96 0.00 0.00 3.42
4261 4446 2.472695 TGCTTTGCCGTTGATCTAGT 57.527 45.000 0.00 0.00 0.00 2.57
4584 4769 6.077838 CCAGAAATCGGTACTTTCGAAAAAG 58.922 40.000 12.41 3.55 46.11 2.27
4590 4775 3.323243 ACACCAGAAATCGGTACTTTCG 58.677 45.455 0.00 0.00 37.62 3.46
4812 5002 1.009829 GATTGGCTCGCGTCTTGATT 58.990 50.000 5.77 0.00 0.00 2.57
4824 5014 2.279173 ACCTAAACCCTGAGATTGGCT 58.721 47.619 0.00 0.00 0.00 4.75
4861 5051 2.230660 CGCCTCCAACCTTTTCTTCTT 58.769 47.619 0.00 0.00 0.00 2.52
4862 5052 1.897560 CGCCTCCAACCTTTTCTTCT 58.102 50.000 0.00 0.00 0.00 2.85
4863 5053 0.241213 GCGCCTCCAACCTTTTCTTC 59.759 55.000 0.00 0.00 0.00 2.87
4864 5054 1.515521 CGCGCCTCCAACCTTTTCTT 61.516 55.000 0.00 0.00 0.00 2.52
4865 5055 1.966451 CGCGCCTCCAACCTTTTCT 60.966 57.895 0.00 0.00 0.00 2.52
4866 5056 1.912371 CTCGCGCCTCCAACCTTTTC 61.912 60.000 0.00 0.00 0.00 2.29
4880 5079 2.306255 TTAGCCTAAAGCCCCTCGCG 62.306 60.000 0.00 0.00 45.47 5.87
4882 5081 0.179054 GGTTAGCCTAAAGCCCCTCG 60.179 60.000 0.00 0.00 45.47 4.63
5028 5227 5.532406 CACGAATCAATGGAATAGAACCCAT 59.468 40.000 0.00 0.00 44.52 4.00
5113 5316 5.772169 GCTCATCAGCCTCCCTTTATTATTT 59.228 40.000 0.00 0.00 40.14 1.40
5132 5335 1.069823 CCTAATCGGACAGCAGCTCAT 59.930 52.381 0.00 0.00 33.16 2.90
5137 5340 1.148157 CGCACCTAATCGGACAGCAG 61.148 60.000 0.00 0.00 36.31 4.24
5164 5367 2.510768 ACGAAGTGGAGAACAGACAC 57.489 50.000 0.00 0.00 42.51 3.67
5183 5386 4.529716 AAAAGGAAACCAAGGGTACAGA 57.470 40.909 0.00 0.00 33.12 3.41
5307 6048 1.862602 GCCACAAAATTCGGGTCGCT 61.863 55.000 0.00 0.00 0.00 4.93
5339 6082 4.117685 AGTCTTGACGGTTAACAACTGAC 58.882 43.478 8.10 7.57 40.26 3.51
5348 6091 0.035739 GGGGCAAGTCTTGACGGTTA 59.964 55.000 16.99 0.00 40.53 2.85
5349 6092 1.228154 GGGGCAAGTCTTGACGGTT 60.228 57.895 16.99 0.00 40.53 4.44
5352 6095 1.856265 GCTTGGGGCAAGTCTTGACG 61.856 60.000 16.99 1.73 42.77 4.35
5452 6195 6.486320 ACACATGTAACATCTTCATTGTGTCA 59.514 34.615 0.00 0.00 33.40 3.58
5457 6200 7.536281 CACTTGACACATGTAACATCTTCATTG 59.464 37.037 0.00 0.00 0.00 2.82
5471 6214 4.923893 ACAAACATGACACTTGACACATG 58.076 39.130 0.00 0.00 43.56 3.21
5472 6215 4.639755 TGACAAACATGACACTTGACACAT 59.360 37.500 0.00 0.00 0.00 3.21
5473 6216 4.006319 TGACAAACATGACACTTGACACA 58.994 39.130 0.00 0.00 0.00 3.72
5474 6217 4.614555 TGACAAACATGACACTTGACAC 57.385 40.909 0.00 0.00 0.00 3.67
5475 6218 4.699735 AGTTGACAAACATGACACTTGACA 59.300 37.500 0.00 1.62 38.88 3.58
5476 6219 5.235305 AGTTGACAAACATGACACTTGAC 57.765 39.130 0.00 0.00 38.88 3.18
5477 6220 5.182950 ACAAGTTGACAAACATGACACTTGA 59.817 36.000 10.54 0.00 37.20 3.02
5480 6223 4.142403 CCACAAGTTGACAAACATGACACT 60.142 41.667 10.54 0.00 37.20 3.55
5498 6241 4.927267 ACTCCTAATCATCCAACCACAA 57.073 40.909 0.00 0.00 0.00 3.33
5511 6254 8.002431 ACTGAGGATACCACTATACTCCTAAT 57.998 38.462 0.00 0.00 39.02 1.73
5518 6261 5.708877 GTGGACTGAGGATACCACTATAC 57.291 47.826 0.00 0.00 46.14 1.47
5524 6267 1.078823 ACTGGTGGACTGAGGATACCA 59.921 52.381 0.00 0.00 38.98 3.25
5525 6268 1.867363 ACTGGTGGACTGAGGATACC 58.133 55.000 0.00 0.00 37.17 2.73
5526 6269 3.574826 GGATACTGGTGGACTGAGGATAC 59.425 52.174 0.00 0.00 0.00 2.24
5527 6270 3.845860 GGATACTGGTGGACTGAGGATA 58.154 50.000 0.00 0.00 0.00 2.59
5528 6271 2.683768 GGATACTGGTGGACTGAGGAT 58.316 52.381 0.00 0.00 0.00 3.24
5529 6272 2.160721 GGATACTGGTGGACTGAGGA 57.839 55.000 0.00 0.00 0.00 3.71
5543 6286 3.022406 ACACCGGAGTTGTCTAGGATAC 58.978 50.000 9.46 0.00 0.00 2.24
5544 6287 3.377253 ACACCGGAGTTGTCTAGGATA 57.623 47.619 9.46 0.00 0.00 2.59
5545 6288 2.233305 ACACCGGAGTTGTCTAGGAT 57.767 50.000 9.46 0.00 0.00 3.24
5546 6289 1.891150 GAACACCGGAGTTGTCTAGGA 59.109 52.381 22.49 0.00 0.00 2.94
5547 6290 1.616865 TGAACACCGGAGTTGTCTAGG 59.383 52.381 22.49 0.00 0.00 3.02
5548 6291 2.296471 AGTGAACACCGGAGTTGTCTAG 59.704 50.000 22.49 0.00 0.00 2.43
5549 6292 2.313317 AGTGAACACCGGAGTTGTCTA 58.687 47.619 22.49 3.01 0.00 2.59
5550 6293 1.120530 AGTGAACACCGGAGTTGTCT 58.879 50.000 22.49 15.53 0.00 3.41
5551 6294 1.865340 GAAGTGAACACCGGAGTTGTC 59.135 52.381 22.49 13.63 0.00 3.18
5552 6295 1.485066 AGAAGTGAACACCGGAGTTGT 59.515 47.619 22.49 6.14 0.00 3.32
5553 6296 2.240493 AGAAGTGAACACCGGAGTTG 57.760 50.000 22.49 5.38 0.00 3.16
5554 6297 4.202326 ACATAAGAAGTGAACACCGGAGTT 60.202 41.667 17.66 17.66 0.00 3.01
5555 6298 3.323979 ACATAAGAAGTGAACACCGGAGT 59.676 43.478 9.46 2.22 0.00 3.85
5556 6299 3.926616 ACATAAGAAGTGAACACCGGAG 58.073 45.455 9.46 1.26 0.00 4.63
5557 6300 5.416083 CATACATAAGAAGTGAACACCGGA 58.584 41.667 9.46 0.00 0.00 5.14
5558 6301 4.034048 GCATACATAAGAAGTGAACACCGG 59.966 45.833 0.00 0.00 0.00 5.28
5559 6302 4.629634 TGCATACATAAGAAGTGAACACCG 59.370 41.667 1.11 0.00 0.00 4.94
5560 6303 6.489675 CATGCATACATAAGAAGTGAACACC 58.510 40.000 0.00 0.00 33.67 4.16
5561 6304 5.967674 GCATGCATACATAAGAAGTGAACAC 59.032 40.000 14.21 0.00 33.67 3.32
5562 6305 5.647225 TGCATGCATACATAAGAAGTGAACA 59.353 36.000 18.46 0.00 33.67 3.18
5563 6306 6.122850 TGCATGCATACATAAGAAGTGAAC 57.877 37.500 18.46 0.00 33.67 3.18
5564 6307 6.319405 ACATGCATGCATACATAAGAAGTGAA 59.681 34.615 31.73 0.00 33.67 3.18
5565 6308 5.824097 ACATGCATGCATACATAAGAAGTGA 59.176 36.000 31.73 0.00 33.67 3.41
5566 6309 6.068473 ACATGCATGCATACATAAGAAGTG 57.932 37.500 31.73 18.75 33.67 3.16
5567 6310 7.662669 TCATACATGCATGCATACATAAGAAGT 59.337 33.333 31.73 22.59 33.67 3.01
5568 6311 8.036273 TCATACATGCATGCATACATAAGAAG 57.964 34.615 31.73 18.32 33.67 2.85
5569 6312 7.662669 ACTCATACATGCATGCATACATAAGAA 59.337 33.333 31.73 11.84 33.67 2.52
5570 6313 7.118680 CACTCATACATGCATGCATACATAAGA 59.881 37.037 31.73 22.26 33.67 2.10
5571 6314 7.094933 ACACTCATACATGCATGCATACATAAG 60.095 37.037 31.73 25.16 33.67 1.73
5572 6315 6.711645 ACACTCATACATGCATGCATACATAA 59.288 34.615 31.73 16.49 33.67 1.90
5573 6316 6.232692 ACACTCATACATGCATGCATACATA 58.767 36.000 31.73 22.89 33.67 2.29
5574 6317 5.067954 ACACTCATACATGCATGCATACAT 58.932 37.500 31.73 23.12 36.79 2.29
5575 6318 4.453751 ACACTCATACATGCATGCATACA 58.546 39.130 31.73 21.98 34.91 2.29
5576 6319 4.753610 AGACACTCATACATGCATGCATAC 59.246 41.667 31.73 12.72 34.91 2.39
5577 6320 4.964593 AGACACTCATACATGCATGCATA 58.035 39.130 31.73 18.79 34.91 3.14
5578 6321 3.816994 AGACACTCATACATGCATGCAT 58.183 40.909 27.46 27.46 37.08 3.96
5579 6322 3.271055 AGACACTCATACATGCATGCA 57.729 42.857 26.53 25.04 0.00 3.96
5580 6323 4.753610 ACATAGACACTCATACATGCATGC 59.246 41.667 26.53 11.82 0.00 4.06
5581 6324 6.856135 AACATAGACACTCATACATGCATG 57.144 37.500 25.09 25.09 0.00 4.06
5582 6325 8.962884 TTTAACATAGACACTCATACATGCAT 57.037 30.769 0.00 0.00 0.00 3.96
5583 6326 8.785329 TTTTAACATAGACACTCATACATGCA 57.215 30.769 0.00 0.00 0.00 3.96
5619 6362 9.713713 GGTTCACTATTTTACTTTCTTCTCTCT 57.286 33.333 0.00 0.00 0.00 3.10
5620 6363 9.490379 TGGTTCACTATTTTACTTTCTTCTCTC 57.510 33.333 0.00 0.00 0.00 3.20
5645 6388 6.659242 ACTTTCCACCTAACAATCCAACTATG 59.341 38.462 0.00 0.00 0.00 2.23
5646 6389 6.659242 CACTTTCCACCTAACAATCCAACTAT 59.341 38.462 0.00 0.00 0.00 2.12
5647 6390 6.001460 CACTTTCCACCTAACAATCCAACTA 58.999 40.000 0.00 0.00 0.00 2.24
5648 6391 4.827284 CACTTTCCACCTAACAATCCAACT 59.173 41.667 0.00 0.00 0.00 3.16
5649 6392 4.022329 CCACTTTCCACCTAACAATCCAAC 60.022 45.833 0.00 0.00 0.00 3.77
5650 6393 4.148838 CCACTTTCCACCTAACAATCCAA 58.851 43.478 0.00 0.00 0.00 3.53
5651 6394 3.139397 ACCACTTTCCACCTAACAATCCA 59.861 43.478 0.00 0.00 0.00 3.41
5652 6395 3.763057 ACCACTTTCCACCTAACAATCC 58.237 45.455 0.00 0.00 0.00 3.01
5653 6396 6.884836 AGAATACCACTTTCCACCTAACAATC 59.115 38.462 0.00 0.00 0.00 2.67
5654 6397 6.790319 AGAATACCACTTTCCACCTAACAAT 58.210 36.000 0.00 0.00 0.00 2.71
5655 6398 6.183361 TGAGAATACCACTTTCCACCTAACAA 60.183 38.462 0.00 0.00 0.00 2.83
5656 6399 5.308497 TGAGAATACCACTTTCCACCTAACA 59.692 40.000 0.00 0.00 0.00 2.41
5657 6400 5.801380 TGAGAATACCACTTTCCACCTAAC 58.199 41.667 0.00 0.00 0.00 2.34
5658 6401 5.570844 GCTGAGAATACCACTTTCCACCTAA 60.571 44.000 0.00 0.00 0.00 2.69
5659 6402 4.081087 GCTGAGAATACCACTTTCCACCTA 60.081 45.833 0.00 0.00 0.00 3.08
5660 6403 3.307762 GCTGAGAATACCACTTTCCACCT 60.308 47.826 0.00 0.00 0.00 4.00
5661 6404 3.010420 GCTGAGAATACCACTTTCCACC 58.990 50.000 0.00 0.00 0.00 4.61
5662 6405 3.010420 GGCTGAGAATACCACTTTCCAC 58.990 50.000 0.00 0.00 0.00 4.02
5663 6406 2.026262 GGGCTGAGAATACCACTTTCCA 60.026 50.000 0.00 0.00 0.00 3.53
5664 6407 2.026262 TGGGCTGAGAATACCACTTTCC 60.026 50.000 0.00 0.00 0.00 3.13
5665 6408 3.350219 TGGGCTGAGAATACCACTTTC 57.650 47.619 0.00 0.00 0.00 2.62
5666 6409 3.266772 TGATGGGCTGAGAATACCACTTT 59.733 43.478 0.00 0.00 35.52 2.66
5667 6410 2.846206 TGATGGGCTGAGAATACCACTT 59.154 45.455 0.00 0.00 35.52 3.16
5668 6411 2.171448 GTGATGGGCTGAGAATACCACT 59.829 50.000 0.00 0.00 35.52 4.00
5669 6412 2.565841 GTGATGGGCTGAGAATACCAC 58.434 52.381 0.00 0.00 35.52 4.16
5670 6413 1.138859 CGTGATGGGCTGAGAATACCA 59.861 52.381 0.00 0.00 37.41 3.25
5671 6414 1.871080 CGTGATGGGCTGAGAATACC 58.129 55.000 0.00 0.00 0.00 2.73
5672 6415 1.202580 AGCGTGATGGGCTGAGAATAC 60.203 52.381 0.00 0.00 39.77 1.89
5673 6416 1.123077 AGCGTGATGGGCTGAGAATA 58.877 50.000 0.00 0.00 39.77 1.75
5674 6417 0.254178 AAGCGTGATGGGCTGAGAAT 59.746 50.000 0.00 0.00 41.39 2.40
5675 6418 0.036732 AAAGCGTGATGGGCTGAGAA 59.963 50.000 0.00 0.00 41.39 2.87
5676 6419 0.901827 TAAAGCGTGATGGGCTGAGA 59.098 50.000 0.00 0.00 41.39 3.27
5677 6420 1.667724 CTTAAAGCGTGATGGGCTGAG 59.332 52.381 0.00 0.00 41.39 3.35
5678 6421 1.003118 ACTTAAAGCGTGATGGGCTGA 59.997 47.619 0.00 0.00 41.39 4.26
5679 6422 1.453155 ACTTAAAGCGTGATGGGCTG 58.547 50.000 0.00 0.00 41.39 4.85
5680 6423 2.200373 AACTTAAAGCGTGATGGGCT 57.800 45.000 0.00 0.00 44.02 5.19
5681 6424 2.986479 CAAAACTTAAAGCGTGATGGGC 59.014 45.455 0.00 0.00 0.00 5.36
5682 6425 3.005367 ACCAAAACTTAAAGCGTGATGGG 59.995 43.478 0.00 0.00 0.00 4.00
5683 6426 3.980775 CACCAAAACTTAAAGCGTGATGG 59.019 43.478 0.00 0.00 0.00 3.51
5684 6427 3.425193 GCACCAAAACTTAAAGCGTGATG 59.575 43.478 0.00 0.00 0.00 3.07
5685 6428 3.317993 AGCACCAAAACTTAAAGCGTGAT 59.682 39.130 0.00 0.00 0.00 3.06
5686 6429 2.685897 AGCACCAAAACTTAAAGCGTGA 59.314 40.909 0.00 0.00 0.00 4.35
5687 6430 3.042887 GAGCACCAAAACTTAAAGCGTG 58.957 45.455 0.00 0.00 0.00 5.34
5688 6431 2.286772 CGAGCACCAAAACTTAAAGCGT 60.287 45.455 0.00 0.00 0.00 5.07
5689 6432 2.307049 CGAGCACCAAAACTTAAAGCG 58.693 47.619 0.00 0.00 0.00 4.68
5690 6433 2.051423 GCGAGCACCAAAACTTAAAGC 58.949 47.619 0.00 0.00 0.00 3.51
5691 6434 3.347958 TGCGAGCACCAAAACTTAAAG 57.652 42.857 0.00 0.00 0.00 1.85
5692 6435 4.314740 AATGCGAGCACCAAAACTTAAA 57.685 36.364 0.00 0.00 0.00 1.52
5693 6436 5.392595 GGATAATGCGAGCACCAAAACTTAA 60.393 40.000 0.00 0.00 0.00 1.85
5694 6437 4.095782 GGATAATGCGAGCACCAAAACTTA 59.904 41.667 0.00 0.00 0.00 2.24
5695 6438 3.119495 GGATAATGCGAGCACCAAAACTT 60.119 43.478 0.00 0.00 0.00 2.66
5696 6439 2.423538 GGATAATGCGAGCACCAAAACT 59.576 45.455 0.00 0.00 0.00 2.66
5697 6440 2.423538 AGGATAATGCGAGCACCAAAAC 59.576 45.455 0.00 0.00 0.00 2.43
5698 6441 2.423185 CAGGATAATGCGAGCACCAAAA 59.577 45.455 0.00 0.00 0.00 2.44
5699 6442 2.016318 CAGGATAATGCGAGCACCAAA 58.984 47.619 0.00 0.00 0.00 3.28
5700 6443 1.209261 TCAGGATAATGCGAGCACCAA 59.791 47.619 0.00 0.00 0.00 3.67
5701 6444 0.829990 TCAGGATAATGCGAGCACCA 59.170 50.000 0.00 0.00 0.00 4.17
5702 6445 1.953559 TTCAGGATAATGCGAGCACC 58.046 50.000 0.00 0.00 0.00 5.01
5703 6446 4.558538 AAATTCAGGATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
5704 6447 6.882610 AATAAATTCAGGATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
5705 6448 9.334693 CTAAAATAAATTCAGGATAATGCGAGC 57.665 33.333 0.00 0.00 0.00 5.03
5721 6464 8.943925 CGCATCGTCGAAAATTCTAAAATAAAT 58.056 29.630 0.00 0.00 0.00 1.40
5722 6465 7.045225 GCGCATCGTCGAAAATTCTAAAATAAA 60.045 33.333 0.30 0.00 0.00 1.40
5723 6466 6.409761 GCGCATCGTCGAAAATTCTAAAATAA 59.590 34.615 0.30 0.00 0.00 1.40
5724 6467 5.899696 GCGCATCGTCGAAAATTCTAAAATA 59.100 36.000 0.30 0.00 0.00 1.40
5725 6468 4.728608 GCGCATCGTCGAAAATTCTAAAAT 59.271 37.500 0.30 0.00 0.00 1.82
5726 6469 4.085884 GCGCATCGTCGAAAATTCTAAAA 58.914 39.130 0.30 0.00 0.00 1.52
5727 6470 3.666001 GCGCATCGTCGAAAATTCTAAA 58.334 40.909 0.30 0.00 0.00 1.85
5728 6471 2.284798 CGCGCATCGTCGAAAATTCTAA 60.285 45.455 8.75 0.00 0.00 2.10
5729 6472 1.254313 CGCGCATCGTCGAAAATTCTA 59.746 47.619 8.75 0.00 0.00 2.10
5730 6473 0.025001 CGCGCATCGTCGAAAATTCT 59.975 50.000 8.75 0.00 0.00 2.40
5731 6474 2.459568 CGCGCATCGTCGAAAATTC 58.540 52.632 8.75 0.00 0.00 2.17
5732 6475 4.643675 CGCGCATCGTCGAAAATT 57.356 50.000 8.75 0.00 0.00 1.82
5741 6484 2.158143 CTTTTCACTAAACGCGCATCG 58.842 47.619 5.73 0.00 45.38 3.84
5742 6485 3.122948 TCTCTTTTCACTAAACGCGCATC 59.877 43.478 5.73 0.00 0.00 3.91
5743 6486 3.064207 TCTCTTTTCACTAAACGCGCAT 58.936 40.909 5.73 0.00 0.00 4.73
5744 6487 2.220133 GTCTCTTTTCACTAAACGCGCA 59.780 45.455 5.73 0.00 0.00 6.09
5745 6488 2.220133 TGTCTCTTTTCACTAAACGCGC 59.780 45.455 5.73 0.00 0.00 6.86
5746 6489 4.647291 ATGTCTCTTTTCACTAAACGCG 57.353 40.909 3.53 3.53 0.00 6.01
5747 6490 5.846473 GTGAATGTCTCTTTTCACTAAACGC 59.154 40.000 8.19 0.00 45.22 4.84
5748 6491 6.065153 CGTGAATGTCTCTTTTCACTAAACG 58.935 40.000 12.38 0.00 46.04 3.60
5749 6492 7.173863 TCGTGAATGTCTCTTTTCACTAAAC 57.826 36.000 12.38 0.00 46.04 2.01
5750 6493 7.962964 ATCGTGAATGTCTCTTTTCACTAAA 57.037 32.000 12.38 1.35 46.04 1.85
5753 6496 9.823647 AATATATCGTGAATGTCTCTTTTCACT 57.176 29.630 12.38 0.25 46.04 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.