Multiple sequence alignment - TraesCS7A01G358100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G358100 chr7A 100.000 7856 0 0 1 7856 527533607 527541462 0.000000e+00 14508.0
1 TraesCS7A01G358100 chr7A 85.271 129 18 1 102 229 252191277 252191149 1.780000e-26 132.0
2 TraesCS7A01G358100 chr7A 92.857 42 3 0 68 109 98793205 98793164 2.370000e-05 62.1
3 TraesCS7A01G358100 chr7B 93.013 4265 200 44 272 4488 494588408 494584194 0.000000e+00 6135.0
4 TraesCS7A01G358100 chr7B 92.496 2905 169 27 4570 7452 494584192 494581315 0.000000e+00 4111.0
5 TraesCS7A01G358100 chr7B 87.817 394 29 5 7463 7856 494581249 494580875 2.010000e-120 444.0
6 TraesCS7A01G358100 chr7B 90.090 111 6 4 4480 4586 348195900 348195791 1.060000e-28 139.0
7 TraesCS7A01G358100 chr7B 91.346 104 5 3 4478 4578 348195802 348195904 1.060000e-28 139.0
8 TraesCS7A01G358100 chr7D 92.453 4346 224 55 201 4488 470893755 470889456 0.000000e+00 6113.0
9 TraesCS7A01G358100 chr7D 92.935 2491 142 20 4570 7046 470889454 470886984 0.000000e+00 3594.0
10 TraesCS7A01G358100 chr7D 87.595 395 27 12 7462 7856 470886585 470886213 9.360000e-119 438.0
11 TraesCS7A01G358100 chr7D 89.506 324 27 1 7071 7394 470886992 470886676 3.410000e-108 403.0
12 TraesCS7A01G358100 chr6D 90.738 1436 126 4 1772 3200 95123 93688 0.000000e+00 1908.0
13 TraesCS7A01G358100 chr6D 87.265 1437 122 33 4614 6028 91084 89687 0.000000e+00 1583.0
14 TraesCS7A01G358100 chr6D 88.386 973 97 9 6149 7118 89637 88678 0.000000e+00 1157.0
15 TraesCS7A01G358100 chr6D 86.055 839 111 6 3618 4451 91985 91148 0.000000e+00 896.0
16 TraesCS7A01G358100 chr6D 90.439 387 36 1 3201 3586 93554 93168 7.030000e-140 508.0
17 TraesCS7A01G358100 chr2D 94.565 92 5 0 4478 4569 294474043 294473952 8.220000e-30 143.0
18 TraesCS7A01G358100 chr4D 91.429 105 5 2 4477 4578 64347352 64347455 2.960000e-29 141.0
19 TraesCS7A01G358100 chr4D 94.624 93 2 1 4487 4576 245478338 245478430 2.960000e-29 141.0
20 TraesCS7A01G358100 chr4D 93.750 96 3 1 4487 4579 282080032 282079937 2.960000e-29 141.0
21 TraesCS7A01G358100 chr3D 92.708 96 3 2 4479 4571 302930478 302930384 1.380000e-27 135.0
22 TraesCS7A01G358100 chr1B 90.000 110 4 5 4477 4580 665690227 665690119 1.380000e-27 135.0
23 TraesCS7A01G358100 chr5B 91.000 100 7 2 4477 4574 339905190 339905091 4.950000e-27 134.0
24 TraesCS7A01G358100 chr5B 96.970 33 1 0 69 101 646483934 646483902 1.000000e-03 56.5
25 TraesCS7A01G358100 chr3B 82.569 109 19 0 102 210 708172022 708172130 6.490000e-16 97.1
26 TraesCS7A01G358100 chr3B 79.365 126 20 5 109 231 819727445 819727323 5.050000e-12 84.2
27 TraesCS7A01G358100 chr3B 96.970 33 1 0 69 101 123572288 123572320 1.000000e-03 56.5
28 TraesCS7A01G358100 chr1A 92.308 52 4 0 102 153 45530882 45530933 3.040000e-09 75.0
29 TraesCS7A01G358100 chr6B 94.872 39 1 1 69 107 643857505 643857468 8.510000e-05 60.2
30 TraesCS7A01G358100 chrUn 94.595 37 2 0 69 105 101253730 101253766 3.060000e-04 58.4
31 TraesCS7A01G358100 chr4B 96.970 33 1 0 69 101 306583764 306583796 1.000000e-03 56.5
32 TraesCS7A01G358100 chr2B 96.970 33 1 0 69 101 412721290 412721322 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G358100 chr7A 527533607 527541462 7855 False 14508.000000 14508 100.000000 1 7856 1 chr7A.!!$F1 7855
1 TraesCS7A01G358100 chr7B 494580875 494588408 7533 True 3563.333333 6135 91.108667 272 7856 3 chr7B.!!$R2 7584
2 TraesCS7A01G358100 chr7D 470886213 470893755 7542 True 2637.000000 6113 90.622250 201 7856 4 chr7D.!!$R1 7655
3 TraesCS7A01G358100 chr6D 88678 95123 6445 True 1210.400000 1908 88.576600 1772 7118 5 chr6D.!!$R1 5346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.037590 TTTCATGCCTTGGCTACCGT 59.962 50.0 13.18 0.00 0.00 4.83 F
157 158 0.319641 GACTTGACCGGTCAGTGTCC 60.320 60.0 36.68 26.83 41.13 4.02 F
1053 1111 0.039618 ATCCGGCCATGGTGTTTCTT 59.960 50.0 14.67 0.00 0.00 2.52 F
1300 1363 0.926155 CTGATCGACTGCGTCAATGG 59.074 55.0 8.91 0.00 38.98 3.16 F
2802 2874 0.531200 CAGTACCCTCTTCACGGTCC 59.469 60.0 0.00 0.00 33.36 4.46 F
3071 3143 0.463474 GAGAGAAGGTGGCCATCTGC 60.463 60.0 22.11 19.67 31.26 4.26 F
4497 5873 0.252375 TAACAAGCTACCCCCTCCGT 60.252 55.0 0.00 0.00 0.00 4.69 F
4499 5875 0.252375 ACAAGCTACCCCCTCCGTAA 60.252 55.0 0.00 0.00 0.00 3.18 F
4502 5878 0.337428 AGCTACCCCCTCCGTAAAGA 59.663 55.0 0.00 0.00 0.00 2.52 F
5708 7129 0.447801 CAGGAAGCGGGAAATCAACG 59.552 55.0 0.00 0.00 0.00 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1053 1111 0.410663 TCCCGTCTTCCTCCTTACCA 59.589 55.000 0.00 0.00 0.00 3.25 R
2082 2154 0.091344 CGTACGAACGCAAAGAGCAG 59.909 55.000 10.44 0.00 46.13 4.24 R
2780 2852 1.153823 CGTGAAGAGGGTACTGGCG 60.154 63.158 0.00 0.00 0.00 5.69 R
3009 3081 3.194861 CATTCCTTAGCGTCAAATCGGA 58.805 45.455 0.00 0.00 0.00 4.55 R
4480 5856 0.252375 TTACGGAGGGGGTAGCTTGT 60.252 55.000 0.00 0.00 0.00 3.16 R
4709 6112 0.324614 TACCCATGACCAGCACTGTG 59.675 55.000 2.76 2.76 0.00 3.66 R
5708 7129 1.929836 CGGAACAGTGAGCTGATAAGC 59.070 52.381 0.00 0.00 45.28 3.09 R
6114 7536 5.690865 ACATGAAACTTGGAAGTGTTAGGA 58.309 37.500 0.00 0.00 39.66 2.94 R
6119 7541 6.428159 GTCAGATACATGAAACTTGGAAGTGT 59.572 38.462 0.00 0.00 39.66 3.55 R
7502 8992 0.178767 TGACCCAATGAGATCTGCCG 59.821 55.000 0.00 0.00 0.00 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.668386 CCAAGGGCAAGTTCGTCC 58.332 61.111 0.00 0.00 0.00 4.79
26 27 1.073199 CCAAGGGCAAGTTCGTCCT 59.927 57.895 0.00 0.00 45.16 3.85
27 28 0.323629 CCAAGGGCAAGTTCGTCCTA 59.676 55.000 0.00 0.00 41.26 2.94
28 29 1.271163 CCAAGGGCAAGTTCGTCCTAA 60.271 52.381 0.00 0.00 41.26 2.69
29 30 2.500229 CAAGGGCAAGTTCGTCCTAAA 58.500 47.619 0.00 0.00 41.26 1.85
30 31 3.081804 CAAGGGCAAGTTCGTCCTAAAT 58.918 45.455 0.00 0.00 41.26 1.40
31 32 3.434940 AGGGCAAGTTCGTCCTAAATT 57.565 42.857 0.00 0.00 39.96 1.82
32 33 3.344515 AGGGCAAGTTCGTCCTAAATTC 58.655 45.455 0.00 0.00 39.96 2.17
33 34 3.009143 AGGGCAAGTTCGTCCTAAATTCT 59.991 43.478 0.00 0.00 39.96 2.40
34 35 3.374367 GGGCAAGTTCGTCCTAAATTCTC 59.626 47.826 0.00 0.00 0.00 2.87
35 36 4.254492 GGCAAGTTCGTCCTAAATTCTCT 58.746 43.478 0.00 0.00 0.00 3.10
36 37 5.416947 GGCAAGTTCGTCCTAAATTCTCTA 58.583 41.667 0.00 0.00 0.00 2.43
37 38 5.520649 GGCAAGTTCGTCCTAAATTCTCTAG 59.479 44.000 0.00 0.00 0.00 2.43
38 39 6.331061 GCAAGTTCGTCCTAAATTCTCTAGA 58.669 40.000 0.00 0.00 0.00 2.43
39 40 6.812160 GCAAGTTCGTCCTAAATTCTCTAGAA 59.188 38.462 0.00 0.00 38.56 2.10
40 41 7.492994 GCAAGTTCGTCCTAAATTCTCTAGAAT 59.507 37.037 0.00 0.00 45.91 2.40
52 53 6.956202 ATTCTCTAGAATTTCATGCCTTGG 57.044 37.500 0.00 0.00 41.64 3.61
53 54 4.202441 TCTCTAGAATTTCATGCCTTGGC 58.798 43.478 4.43 4.43 0.00 4.52
54 55 4.080129 TCTCTAGAATTTCATGCCTTGGCT 60.080 41.667 13.18 0.00 0.00 4.75
55 56 5.130975 TCTCTAGAATTTCATGCCTTGGCTA 59.869 40.000 13.18 0.00 0.00 3.93
56 57 5.126067 TCTAGAATTTCATGCCTTGGCTAC 58.874 41.667 13.18 0.00 0.00 3.58
57 58 3.026694 AGAATTTCATGCCTTGGCTACC 58.973 45.455 13.18 0.00 0.00 3.18
58 59 1.392589 ATTTCATGCCTTGGCTACCG 58.607 50.000 13.18 0.00 0.00 4.02
59 60 0.037590 TTTCATGCCTTGGCTACCGT 59.962 50.000 13.18 0.00 0.00 4.83
60 61 0.676466 TTCATGCCTTGGCTACCGTG 60.676 55.000 13.18 4.64 0.00 4.94
61 62 2.438434 ATGCCTTGGCTACCGTGC 60.438 61.111 13.18 0.00 0.00 5.34
69 70 4.390048 GCTACCGTGCCAGGAAAA 57.610 55.556 1.23 0.00 34.73 2.29
70 71 2.636299 GCTACCGTGCCAGGAAAAA 58.364 52.632 1.23 0.00 34.73 1.94
71 72 1.173913 GCTACCGTGCCAGGAAAAAT 58.826 50.000 1.23 0.00 34.73 1.82
72 73 1.135402 GCTACCGTGCCAGGAAAAATG 60.135 52.381 1.23 0.00 34.73 2.32
73 74 0.885196 TACCGTGCCAGGAAAAATGC 59.115 50.000 1.23 0.00 34.73 3.56
74 75 1.112315 ACCGTGCCAGGAAAAATGCA 61.112 50.000 1.23 0.00 34.73 3.96
76 77 3.215642 GTGCCAGGAAAAATGCACC 57.784 52.632 2.19 0.00 46.33 5.01
77 78 0.681175 GTGCCAGGAAAAATGCACCT 59.319 50.000 2.19 0.00 46.33 4.00
78 79 1.070601 GTGCCAGGAAAAATGCACCTT 59.929 47.619 2.19 0.00 46.33 3.50
79 80 2.298729 GTGCCAGGAAAAATGCACCTTA 59.701 45.455 2.19 0.00 46.33 2.69
80 81 3.055891 GTGCCAGGAAAAATGCACCTTAT 60.056 43.478 2.19 0.00 46.33 1.73
81 82 4.159506 GTGCCAGGAAAAATGCACCTTATA 59.840 41.667 2.19 0.00 46.33 0.98
82 83 4.961730 TGCCAGGAAAAATGCACCTTATAT 59.038 37.500 0.00 0.00 31.06 0.86
83 84 6.040391 GTGCCAGGAAAAATGCACCTTATATA 59.960 38.462 2.19 0.00 46.33 0.86
84 85 6.609212 TGCCAGGAAAAATGCACCTTATATAA 59.391 34.615 0.00 0.00 31.06 0.98
85 86 7.124901 TGCCAGGAAAAATGCACCTTATATAAA 59.875 33.333 0.00 0.00 31.06 1.40
86 87 7.653311 GCCAGGAAAAATGCACCTTATATAAAG 59.347 37.037 0.00 0.00 31.06 1.85
87 88 8.912988 CCAGGAAAAATGCACCTTATATAAAGA 58.087 33.333 0.00 0.00 31.06 2.52
95 96 8.682936 ATGCACCTTATATAAAGAAACAGAGG 57.317 34.615 0.00 0.00 0.00 3.69
96 97 7.054124 TGCACCTTATATAAAGAAACAGAGGG 58.946 38.462 0.00 0.00 0.00 4.30
97 98 7.092623 TGCACCTTATATAAAGAAACAGAGGGA 60.093 37.037 0.00 0.00 0.00 4.20
98 99 7.442666 GCACCTTATATAAAGAAACAGAGGGAG 59.557 40.741 0.00 0.00 0.00 4.30
99 100 8.487028 CACCTTATATAAAGAAACAGAGGGAGT 58.513 37.037 0.00 0.00 0.00 3.85
100 101 9.725206 ACCTTATATAAAGAAACAGAGGGAGTA 57.275 33.333 0.00 0.00 0.00 2.59
109 110 9.454859 AAAGAAACAGAGGGAGTAATAATCAAG 57.545 33.333 0.00 0.00 0.00 3.02
110 111 8.380742 AGAAACAGAGGGAGTAATAATCAAGA 57.619 34.615 0.00 0.00 0.00 3.02
111 112 8.997734 AGAAACAGAGGGAGTAATAATCAAGAT 58.002 33.333 0.00 0.00 0.00 2.40
112 113 8.970859 AAACAGAGGGAGTAATAATCAAGATG 57.029 34.615 0.00 0.00 0.00 2.90
113 114 7.682787 ACAGAGGGAGTAATAATCAAGATGT 57.317 36.000 0.00 0.00 0.00 3.06
114 115 7.731054 ACAGAGGGAGTAATAATCAAGATGTC 58.269 38.462 0.00 0.00 0.00 3.06
115 116 7.158021 CAGAGGGAGTAATAATCAAGATGTCC 58.842 42.308 0.00 0.00 0.00 4.02
116 117 6.846505 AGAGGGAGTAATAATCAAGATGTCCA 59.153 38.462 0.00 0.00 0.00 4.02
117 118 7.016072 AGAGGGAGTAATAATCAAGATGTCCAG 59.984 40.741 0.00 0.00 0.00 3.86
118 119 6.617371 AGGGAGTAATAATCAAGATGTCCAGT 59.383 38.462 0.00 0.00 0.00 4.00
119 120 7.127955 AGGGAGTAATAATCAAGATGTCCAGTT 59.872 37.037 0.00 0.00 0.00 3.16
120 121 7.227512 GGGAGTAATAATCAAGATGTCCAGTTG 59.772 40.741 0.00 0.00 0.00 3.16
121 122 7.770897 GGAGTAATAATCAAGATGTCCAGTTGT 59.229 37.037 0.00 0.00 0.00 3.32
122 123 8.498054 AGTAATAATCAAGATGTCCAGTTGTG 57.502 34.615 0.00 0.00 0.00 3.33
123 124 8.321353 AGTAATAATCAAGATGTCCAGTTGTGA 58.679 33.333 0.00 0.00 0.00 3.58
124 125 7.621428 AATAATCAAGATGTCCAGTTGTGAG 57.379 36.000 0.00 0.00 0.00 3.51
125 126 4.897509 ATCAAGATGTCCAGTTGTGAGA 57.102 40.909 0.00 0.00 0.00 3.27
126 127 4.687901 TCAAGATGTCCAGTTGTGAGAA 57.312 40.909 0.00 0.00 0.00 2.87
127 128 4.635223 TCAAGATGTCCAGTTGTGAGAAG 58.365 43.478 0.00 0.00 0.00 2.85
128 129 3.692257 AGATGTCCAGTTGTGAGAAGG 57.308 47.619 0.00 0.00 0.00 3.46
129 130 2.079925 GATGTCCAGTTGTGAGAAGGC 58.920 52.381 0.00 0.00 0.00 4.35
130 131 0.836606 TGTCCAGTTGTGAGAAGGCA 59.163 50.000 0.00 0.00 0.00 4.75
131 132 1.211703 TGTCCAGTTGTGAGAAGGCAA 59.788 47.619 0.00 0.00 0.00 4.52
132 133 2.297701 GTCCAGTTGTGAGAAGGCAAA 58.702 47.619 0.00 0.00 0.00 3.68
133 134 2.887152 GTCCAGTTGTGAGAAGGCAAAT 59.113 45.455 0.00 0.00 0.00 2.32
134 135 3.319122 GTCCAGTTGTGAGAAGGCAAATT 59.681 43.478 0.00 0.00 0.00 1.82
135 136 3.960102 TCCAGTTGTGAGAAGGCAAATTT 59.040 39.130 0.00 0.00 0.00 1.82
136 137 4.053295 CCAGTTGTGAGAAGGCAAATTTG 58.947 43.478 14.03 14.03 0.00 2.32
137 138 4.202141 CCAGTTGTGAGAAGGCAAATTTGA 60.202 41.667 22.31 0.00 0.00 2.69
138 139 4.980434 CAGTTGTGAGAAGGCAAATTTGAG 59.020 41.667 22.31 0.00 0.00 3.02
139 140 4.889409 AGTTGTGAGAAGGCAAATTTGAGA 59.111 37.500 22.31 0.00 0.00 3.27
140 141 4.836125 TGTGAGAAGGCAAATTTGAGAC 57.164 40.909 22.31 10.61 0.00 3.36
141 142 4.464008 TGTGAGAAGGCAAATTTGAGACT 58.536 39.130 22.31 12.63 0.00 3.24
142 143 4.889409 TGTGAGAAGGCAAATTTGAGACTT 59.111 37.500 22.31 19.44 0.00 3.01
143 144 5.218139 GTGAGAAGGCAAATTTGAGACTTG 58.782 41.667 22.31 0.00 0.00 3.16
144 145 5.009010 GTGAGAAGGCAAATTTGAGACTTGA 59.991 40.000 22.31 6.12 0.00 3.02
145 146 5.009010 TGAGAAGGCAAATTTGAGACTTGAC 59.991 40.000 22.31 15.31 0.00 3.18
146 147 4.279420 AGAAGGCAAATTTGAGACTTGACC 59.721 41.667 22.31 10.31 0.00 4.02
147 148 2.554032 AGGCAAATTTGAGACTTGACCG 59.446 45.455 22.31 0.00 0.00 4.79
148 149 2.351738 GGCAAATTTGAGACTTGACCGG 60.352 50.000 22.31 0.00 0.00 5.28
149 150 2.293399 GCAAATTTGAGACTTGACCGGT 59.707 45.455 22.31 6.92 0.00 5.28
150 151 3.609409 GCAAATTTGAGACTTGACCGGTC 60.609 47.826 28.17 28.17 0.00 4.79
151 152 3.485463 AATTTGAGACTTGACCGGTCA 57.515 42.857 33.23 33.23 37.91 4.02
152 153 2.526304 TTTGAGACTTGACCGGTCAG 57.474 50.000 34.25 28.34 41.13 3.51
153 154 1.410004 TTGAGACTTGACCGGTCAGT 58.590 50.000 34.25 30.93 41.13 3.41
154 155 0.673985 TGAGACTTGACCGGTCAGTG 59.326 55.000 34.25 30.26 41.13 3.66
155 156 0.674534 GAGACTTGACCGGTCAGTGT 59.325 55.000 34.25 32.83 41.13 3.55
156 157 0.674534 AGACTTGACCGGTCAGTGTC 59.325 55.000 38.03 38.03 41.13 3.67
157 158 0.319641 GACTTGACCGGTCAGTGTCC 60.320 60.000 36.68 26.83 41.13 4.02
158 159 1.372997 CTTGACCGGTCAGTGTCCG 60.373 63.158 34.25 20.15 46.49 4.79
159 160 3.509137 TTGACCGGTCAGTGTCCGC 62.509 63.158 34.25 7.30 45.71 5.54
162 163 4.351938 CCGGTCAGTGTCCGCGAA 62.352 66.667 21.44 0.00 45.71 4.70
163 164 3.103911 CGGTCAGTGTCCGCGAAC 61.104 66.667 15.71 0.00 41.48 3.95
164 165 2.028484 GGTCAGTGTCCGCGAACA 59.972 61.111 8.23 0.00 0.00 3.18
165 166 1.374252 GGTCAGTGTCCGCGAACAT 60.374 57.895 8.23 0.00 0.00 2.71
166 167 1.626654 GGTCAGTGTCCGCGAACATG 61.627 60.000 8.23 4.48 0.00 3.21
167 168 2.027073 TCAGTGTCCGCGAACATGC 61.027 57.895 8.23 0.00 0.00 4.06
168 169 2.742372 AGTGTCCGCGAACATGCC 60.742 61.111 8.23 0.00 0.00 4.40
169 170 3.799755 GTGTCCGCGAACATGCCC 61.800 66.667 8.23 0.00 0.00 5.36
199 200 4.011517 GGGCGTTTCAGGGGTCGA 62.012 66.667 0.00 0.00 0.00 4.20
200 201 2.031465 GGCGTTTCAGGGGTCGAA 59.969 61.111 0.00 0.00 0.00 3.71
201 202 1.376812 GGCGTTTCAGGGGTCGAAT 60.377 57.895 0.00 0.00 0.00 3.34
202 203 0.958876 GGCGTTTCAGGGGTCGAATT 60.959 55.000 0.00 0.00 0.00 2.17
203 204 0.879090 GCGTTTCAGGGGTCGAATTT 59.121 50.000 0.00 0.00 0.00 1.82
204 205 1.401018 GCGTTTCAGGGGTCGAATTTG 60.401 52.381 0.00 0.00 0.00 2.32
205 206 1.401018 CGTTTCAGGGGTCGAATTTGC 60.401 52.381 0.00 0.00 0.00 3.68
206 207 1.611491 GTTTCAGGGGTCGAATTTGCA 59.389 47.619 0.00 0.00 0.00 4.08
207 208 1.988293 TTCAGGGGTCGAATTTGCAA 58.012 45.000 0.00 0.00 0.00 4.08
208 209 1.988293 TCAGGGGTCGAATTTGCAAA 58.012 45.000 15.44 15.44 0.00 3.68
209 210 1.885887 TCAGGGGTCGAATTTGCAAAG 59.114 47.619 18.19 4.27 0.00 2.77
210 211 1.613437 CAGGGGTCGAATTTGCAAAGT 59.387 47.619 18.19 15.58 0.00 2.66
211 212 1.886542 AGGGGTCGAATTTGCAAAGTC 59.113 47.619 25.60 25.60 0.00 3.01
212 213 1.611491 GGGGTCGAATTTGCAAAGTCA 59.389 47.619 31.70 19.51 32.93 3.41
213 214 2.035321 GGGGTCGAATTTGCAAAGTCAA 59.965 45.455 31.70 17.24 32.93 3.18
214 215 3.308530 GGGTCGAATTTGCAAAGTCAAG 58.691 45.455 31.70 20.06 32.93 3.02
215 216 2.726241 GGTCGAATTTGCAAAGTCAAGC 59.274 45.455 31.70 23.24 32.93 4.01
220 221 4.379793 CGAATTTGCAAAGTCAAGCTGTAC 59.620 41.667 31.70 9.22 32.93 2.90
237 238 4.031878 GCTGTACATGCTTTAAGAGTCGTC 59.968 45.833 0.00 0.00 0.00 4.20
260 261 7.342942 GTCGATCGATTAAGGGTAATTTTGAC 58.657 38.462 22.50 0.00 29.69 3.18
265 266 8.441312 TCGATTAAGGGTAATTTTGACCATAC 57.559 34.615 0.00 0.00 38.86 2.39
267 268 8.679100 CGATTAAGGGTAATTTTGACCATACAA 58.321 33.333 0.00 0.00 38.86 2.41
341 342 6.934083 GTGATCTCTCCTCCCAAGAATAAATC 59.066 42.308 0.00 0.00 0.00 2.17
369 370 7.340487 CCTTGATATATCTTCCCTTATTTGCCC 59.660 40.741 13.79 0.00 0.00 5.36
370 371 7.588866 TGATATATCTTCCCTTATTTGCCCT 57.411 36.000 13.79 0.00 0.00 5.19
371 372 7.633789 TGATATATCTTCCCTTATTTGCCCTC 58.366 38.462 13.79 0.00 0.00 4.30
372 373 5.930209 ATATCTTCCCTTATTTGCCCTCA 57.070 39.130 0.00 0.00 0.00 3.86
388 389 4.776837 TGCCCTCATTCATGTTTTAATGGT 59.223 37.500 5.34 0.00 34.52 3.55
456 459 1.610363 CCCACACGATCATGGACAACA 60.610 52.381 8.83 0.00 38.34 3.33
463 466 5.111989 CACGATCATGGACAACATCTTACT 58.888 41.667 0.00 0.00 37.84 2.24
471 474 5.441500 TGGACAACATCTTACTTCCACAAA 58.558 37.500 0.00 0.00 0.00 2.83
487 493 9.449719 ACTTCCACAAAAGGTAAGAGTAATATG 57.550 33.333 0.00 0.00 0.00 1.78
495 518 7.876936 AAGGTAAGAGTAATATGAGTCGTGA 57.123 36.000 0.00 0.00 0.00 4.35
520 543 1.640428 TTGACGGCTCACATCGATTC 58.360 50.000 0.00 0.00 0.00 2.52
644 667 3.365265 CAGCCGGAACCAACCAGC 61.365 66.667 5.05 0.00 33.94 4.85
712 735 3.447229 GCTACCTGCTCTTCTCTTCTTCT 59.553 47.826 0.00 0.00 38.95 2.85
713 736 4.642885 GCTACCTGCTCTTCTCTTCTTCTA 59.357 45.833 0.00 0.00 38.95 2.10
714 737 5.449999 GCTACCTGCTCTTCTCTTCTTCTAC 60.450 48.000 0.00 0.00 38.95 2.59
715 738 3.767131 ACCTGCTCTTCTCTTCTTCTACC 59.233 47.826 0.00 0.00 0.00 3.18
716 739 4.023291 CCTGCTCTTCTCTTCTTCTACCT 58.977 47.826 0.00 0.00 0.00 3.08
717 740 4.097892 CCTGCTCTTCTCTTCTTCTACCTC 59.902 50.000 0.00 0.00 0.00 3.85
718 741 4.020543 TGCTCTTCTCTTCTTCTACCTCC 58.979 47.826 0.00 0.00 0.00 4.30
719 742 4.264172 TGCTCTTCTCTTCTTCTACCTCCT 60.264 45.833 0.00 0.00 0.00 3.69
720 743 4.338400 GCTCTTCTCTTCTTCTACCTCCTC 59.662 50.000 0.00 0.00 0.00 3.71
721 744 4.862371 TCTTCTCTTCTTCTACCTCCTCC 58.138 47.826 0.00 0.00 0.00 4.30
722 745 3.284793 TCTCTTCTTCTACCTCCTCCG 57.715 52.381 0.00 0.00 0.00 4.63
723 746 2.844966 TCTCTTCTTCTACCTCCTCCGA 59.155 50.000 0.00 0.00 0.00 4.55
756 779 2.203084 TTCGGCTCAACAACGCCA 60.203 55.556 0.00 0.00 46.62 5.69
761 784 4.025401 CTCAACAACGCCACGCCC 62.025 66.667 0.00 0.00 0.00 6.13
804 827 2.282180 TTTTGCAGGGCGTCCTCC 60.282 61.111 5.00 0.00 42.67 4.30
805 828 2.829384 TTTTGCAGGGCGTCCTCCT 61.829 57.895 5.00 0.00 42.67 3.69
806 829 2.748058 TTTTGCAGGGCGTCCTCCTC 62.748 60.000 5.00 0.00 42.67 3.71
837 865 4.214327 CCGGAGCGGCCTTCTCTC 62.214 72.222 17.81 10.89 41.17 3.20
863 912 1.084370 CAAATCCTCCGTCTGTCCGC 61.084 60.000 0.00 0.00 0.00 5.54
957 1010 1.925972 AAGTGGCTTCCCTCCTCCC 60.926 63.158 0.00 0.00 0.00 4.30
1049 1107 2.124736 CGATCCGGCCATGGTGTT 60.125 61.111 14.67 0.00 0.00 3.32
1053 1111 0.039618 ATCCGGCCATGGTGTTTCTT 59.960 50.000 14.67 0.00 0.00 2.52
1149 1211 2.780014 CGCATTCAGCTTCGCTTAATTG 59.220 45.455 0.00 0.00 42.61 2.32
1181 1244 2.094100 TGCTTGGGTTGGAATTTGGA 57.906 45.000 0.00 0.00 0.00 3.53
1284 1347 3.695606 GCGTGCAGAGGGGTCTGA 61.696 66.667 6.59 0.00 39.99 3.27
1300 1363 0.926155 CTGATCGACTGCGTCAATGG 59.074 55.000 8.91 0.00 38.98 3.16
1312 1375 2.434884 CAATGGCGTGCTCCTCGT 60.435 61.111 0.00 0.00 0.00 4.18
1627 1699 3.628646 ATGCGGAGGTCCTTGCCAC 62.629 63.158 12.94 0.00 0.00 5.01
1774 1846 1.851021 TTGATTGACAAGGCGGTGCG 61.851 55.000 0.00 0.00 34.20 5.34
1894 1966 4.284860 CATCCCGCTCATCGCCGA 62.285 66.667 0.00 0.00 36.73 5.54
1932 2004 2.872557 CGTCGCGTAGGTTCTCCA 59.127 61.111 5.77 0.00 35.89 3.86
2082 2154 2.100989 CCATAGCCGTCTCCCCTATAC 58.899 57.143 0.00 0.00 0.00 1.47
2234 2306 3.757248 GAGGACCGGGATGCGCATT 62.757 63.158 26.12 7.97 0.00 3.56
2273 2345 1.132643 GCCATCTTTCAGAAGCAGCTG 59.867 52.381 10.11 10.11 37.24 4.24
2351 2423 2.126189 GTCGACGCTTACCGGCTT 60.126 61.111 0.00 0.00 44.88 4.35
2802 2874 0.531200 CAGTACCCTCTTCACGGTCC 59.469 60.000 0.00 0.00 33.36 4.46
2885 2957 1.913778 TCCAGTACAAGGTGTCGCTA 58.086 50.000 0.00 0.00 0.00 4.26
2931 3003 5.612725 AGAAGATGAGATCAAAGAGGGTC 57.387 43.478 0.00 0.00 0.00 4.46
2932 3004 5.279685 AGAAGATGAGATCAAAGAGGGTCT 58.720 41.667 0.00 0.00 0.00 3.85
3066 3138 1.492133 CCAAGGAGAGAAGGTGGCCA 61.492 60.000 0.00 0.00 0.00 5.36
3071 3143 0.463474 GAGAGAAGGTGGCCATCTGC 60.463 60.000 22.11 19.67 31.26 4.26
3159 3231 9.775854 CATCAGGATCAGTAAGTGATAGAAAAT 57.224 33.333 0.00 0.00 46.64 1.82
3277 3490 3.205338 TGGATCACTGGCATATGTTTCG 58.795 45.455 4.29 0.00 0.00 3.46
3574 3790 7.004555 TGCAGTTCTTTTCTATGTAAGAGGA 57.995 36.000 0.00 0.00 35.05 3.71
3576 3792 6.314152 GCAGTTCTTTTCTATGTAAGAGGACC 59.686 42.308 0.00 0.00 35.05 4.46
3595 3811 5.191722 AGGACCCTTAATCTGTAATGCTGAA 59.808 40.000 0.00 0.00 0.00 3.02
3689 5056 2.684001 AGACCGTTGTTCTTGTGACA 57.316 45.000 0.00 0.00 0.00 3.58
3737 5104 5.805728 ACTAACAGGATTCTGGTAAGTTGG 58.194 41.667 5.84 0.00 42.09 3.77
3746 5113 5.825593 TTCTGGTAAGTTGGTCTTCTGAT 57.174 39.130 0.00 0.00 37.56 2.90
3747 5114 6.928348 TTCTGGTAAGTTGGTCTTCTGATA 57.072 37.500 0.00 0.00 37.56 2.15
3750 5117 7.918076 TCTGGTAAGTTGGTCTTCTGATAATT 58.082 34.615 0.00 0.00 37.56 1.40
3776 5143 6.397894 GCTGCGCATAATTTCATAAAATCGAC 60.398 38.462 12.24 0.00 33.93 4.20
3785 5152 6.598753 TTTCATAAAATCGACGATCCTTCC 57.401 37.500 11.42 0.00 0.00 3.46
3789 5156 6.866770 TCATAAAATCGACGATCCTTCCATAC 59.133 38.462 11.42 0.00 0.00 2.39
3797 5164 6.605995 TCGACGATCCTTCCATACCATAATAT 59.394 38.462 0.00 0.00 0.00 1.28
3808 5175 6.597672 TCCATACCATAATATTCGGTGATTGC 59.402 38.462 16.27 0.00 34.12 3.56
4030 5402 1.153568 CAGGCCAGCGAGATCGAAA 60.154 57.895 5.01 0.00 43.02 3.46
4268 5640 2.516225 GGTTGGGGCATACTCGGC 60.516 66.667 0.00 0.00 0.00 5.54
4347 5719 1.301677 GACTCAAGGCCTCCAAAGCG 61.302 60.000 5.23 0.00 0.00 4.68
4441 5817 9.574516 GAAGAATATTGACAAGGGTATGGTTAT 57.425 33.333 0.00 0.00 0.00 1.89
4452 5828 9.984590 ACAAGGGTATGGTTATTTTACTGTATT 57.015 29.630 0.00 0.00 0.00 1.89
4454 5830 9.984590 AAGGGTATGGTTATTTTACTGTATTGT 57.015 29.630 0.00 0.00 0.00 2.71
4460 5836 8.804688 TGGTTATTTTACTGTATTGTTGTTGC 57.195 30.769 0.00 0.00 0.00 4.17
4461 5837 7.868415 TGGTTATTTTACTGTATTGTTGTTGCC 59.132 33.333 0.00 0.00 0.00 4.52
4462 5838 7.329962 GGTTATTTTACTGTATTGTTGTTGCCC 59.670 37.037 0.00 0.00 0.00 5.36
4464 5840 5.854010 TTTACTGTATTGTTGTTGCCCAA 57.146 34.783 0.00 0.00 0.00 4.12
4467 5843 7.526142 TTACTGTATTGTTGTTGCCCAAATA 57.474 32.000 0.00 0.00 34.07 1.40
4469 5845 7.003402 ACTGTATTGTTGTTGCCCAAATAAT 57.997 32.000 0.00 0.00 34.07 1.28
4470 5846 8.128322 ACTGTATTGTTGTTGCCCAAATAATA 57.872 30.769 0.00 0.00 34.07 0.98
4471 5847 8.757877 ACTGTATTGTTGTTGCCCAAATAATAT 58.242 29.630 7.10 0.00 34.07 1.28
4491 5867 9.749340 ATAATATTAACCATAACAAGCTACCCC 57.251 33.333 0.00 0.00 0.00 4.95
4492 5868 2.820728 AACCATAACAAGCTACCCCC 57.179 50.000 0.00 0.00 0.00 5.40
4493 5869 1.981259 ACCATAACAAGCTACCCCCT 58.019 50.000 0.00 0.00 0.00 4.79
4494 5870 1.844497 ACCATAACAAGCTACCCCCTC 59.156 52.381 0.00 0.00 0.00 4.30
4495 5871 1.143073 CCATAACAAGCTACCCCCTCC 59.857 57.143 0.00 0.00 0.00 4.30
4496 5872 1.129058 ATAACAAGCTACCCCCTCCG 58.871 55.000 0.00 0.00 0.00 4.63
4497 5873 0.252375 TAACAAGCTACCCCCTCCGT 60.252 55.000 0.00 0.00 0.00 4.69
4498 5874 0.252375 AACAAGCTACCCCCTCCGTA 60.252 55.000 0.00 0.00 0.00 4.02
4499 5875 0.252375 ACAAGCTACCCCCTCCGTAA 60.252 55.000 0.00 0.00 0.00 3.18
4500 5876 0.906775 CAAGCTACCCCCTCCGTAAA 59.093 55.000 0.00 0.00 0.00 2.01
4501 5877 1.134491 CAAGCTACCCCCTCCGTAAAG 60.134 57.143 0.00 0.00 0.00 1.85
4502 5878 0.337428 AGCTACCCCCTCCGTAAAGA 59.663 55.000 0.00 0.00 0.00 2.52
4503 5879 1.197812 GCTACCCCCTCCGTAAAGAA 58.802 55.000 0.00 0.00 0.00 2.52
4504 5880 1.556451 GCTACCCCCTCCGTAAAGAAA 59.444 52.381 0.00 0.00 0.00 2.52
4505 5881 2.172082 GCTACCCCCTCCGTAAAGAAAT 59.828 50.000 0.00 0.00 0.00 2.17
4506 5882 3.389002 GCTACCCCCTCCGTAAAGAAATA 59.611 47.826 0.00 0.00 0.00 1.40
4507 5883 4.041321 GCTACCCCCTCCGTAAAGAAATAT 59.959 45.833 0.00 0.00 0.00 1.28
4508 5884 5.246883 GCTACCCCCTCCGTAAAGAAATATA 59.753 44.000 0.00 0.00 0.00 0.86
4509 5885 6.239686 GCTACCCCCTCCGTAAAGAAATATAA 60.240 42.308 0.00 0.00 0.00 0.98
4510 5886 6.183810 ACCCCCTCCGTAAAGAAATATAAG 57.816 41.667 0.00 0.00 0.00 1.73
4511 5887 5.907079 ACCCCCTCCGTAAAGAAATATAAGA 59.093 40.000 0.00 0.00 0.00 2.10
4512 5888 6.042897 ACCCCCTCCGTAAAGAAATATAAGAG 59.957 42.308 0.00 0.00 0.00 2.85
4513 5889 5.932883 CCCCTCCGTAAAGAAATATAAGAGC 59.067 44.000 0.00 0.00 0.00 4.09
4514 5890 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
4515 5891 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
4516 5892 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
4517 5893 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
4518 5894 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
4519 5895 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
4520 5896 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
4531 5907 6.952935 AAGAGCGTTTAGATCACTAAAGTG 57.047 37.500 3.64 3.64 45.42 3.16
4562 5938 8.649973 AACGCTCTTATATTTCTTTACAGAGG 57.350 34.615 0.00 0.00 0.00 3.69
4563 5939 7.210873 ACGCTCTTATATTTCTTTACAGAGGG 58.789 38.462 8.36 8.36 42.53 4.30
4564 5940 7.069578 ACGCTCTTATATTTCTTTACAGAGGGA 59.930 37.037 14.96 0.00 40.49 4.20
4565 5941 7.596995 CGCTCTTATATTTCTTTACAGAGGGAG 59.403 40.741 4.76 0.00 40.49 4.30
4573 5949 6.681729 TTCTTTACAGAGGGAGTACATGTT 57.318 37.500 2.30 0.00 0.00 2.71
4604 6001 2.116827 ACTAGTGACGAGTCCCTGAG 57.883 55.000 0.00 0.00 0.00 3.35
4616 6019 2.572104 AGTCCCTGAGCGAAGGTTTATT 59.428 45.455 6.93 0.00 39.88 1.40
4676 6079 2.438021 TGACATACCTTACTCCATGGCC 59.562 50.000 6.96 0.00 0.00 5.36
4781 6184 2.019249 CCAGTTGCAGTATCCATGGTG 58.981 52.381 12.58 3.41 0.00 4.17
4800 6203 5.547465 TGGTGTATGTTCAGGTAAGTCTTG 58.453 41.667 0.00 0.00 0.00 3.02
4808 6211 6.880484 TGTTCAGGTAAGTCTTGTACTTTGA 58.120 36.000 0.00 0.00 46.61 2.69
4810 6213 7.656137 TGTTCAGGTAAGTCTTGTACTTTGATC 59.344 37.037 0.00 0.00 46.61 2.92
4832 6235 9.187996 TGATCTACATTGATCCAAGCAATTAAA 57.812 29.630 0.00 0.00 41.42 1.52
4850 6253 9.651913 GCAATTAAACTCAGGAAATTAATCCAA 57.348 29.630 0.00 0.00 42.27 3.53
4857 6260 7.470192 ACTCAGGAAATTAATCCAAAGGAGAA 58.530 34.615 11.16 0.00 42.27 2.87
4891 6296 6.699575 ATGTGTCTTGTGAGTTTAAAAGCT 57.300 33.333 0.00 0.00 0.00 3.74
4892 6297 5.879237 TGTGTCTTGTGAGTTTAAAAGCTG 58.121 37.500 0.00 0.00 0.00 4.24
4893 6298 5.645929 TGTGTCTTGTGAGTTTAAAAGCTGA 59.354 36.000 0.00 0.00 0.00 4.26
4894 6299 6.318648 TGTGTCTTGTGAGTTTAAAAGCTGAT 59.681 34.615 0.00 0.00 0.00 2.90
4902 6307 6.525976 GTGAGTTTAAAAGCTGATTGATGCTC 59.474 38.462 0.00 0.00 38.75 4.26
5088 6493 4.249661 TGCAACTTATAGACAATGACGCA 58.750 39.130 0.00 0.00 0.00 5.24
5109 6514 1.946768 ACAATGTTCTTCCACACGGTG 59.053 47.619 6.58 6.58 0.00 4.94
5170 6575 4.082625 TGCAAAGCTTGACCATATTCACAG 60.083 41.667 0.00 0.00 0.00 3.66
5240 6650 5.667539 ATCTACATAGCCATTACAGCGAT 57.332 39.130 0.00 0.00 34.64 4.58
5241 6651 5.468540 TCTACATAGCCATTACAGCGATT 57.531 39.130 0.00 0.00 34.64 3.34
5284 6702 5.997129 TGACTGCAGATTTGATGAACACTTA 59.003 36.000 23.35 0.00 0.00 2.24
5323 6741 2.815647 GCGGGTCTTTGCCTCTCG 60.816 66.667 0.00 0.00 0.00 4.04
5374 6792 5.011329 AGTTTTCCTGACACGGTACTATTCA 59.989 40.000 0.00 0.00 0.00 2.57
5458 6876 2.224548 GCCTCCCACCATAATACCAGAC 60.225 54.545 0.00 0.00 0.00 3.51
5488 6906 1.901159 CCAATTTCATGGCCACAGGAA 59.099 47.619 8.16 10.18 44.71 3.36
5537 6955 9.693739 TGAAGGTAAATATAATCTCCTTTGCAA 57.306 29.630 0.00 0.00 35.76 4.08
5539 6957 9.920946 AAGGTAAATATAATCTCCTTTGCAAGA 57.079 29.630 0.00 0.00 32.31 3.02
5708 7129 0.447801 CAGGAAGCGGGAAATCAACG 59.552 55.000 0.00 0.00 0.00 4.10
5813 7234 8.968969 GGTCTCAAGGATCTAAGAACTAAACTA 58.031 37.037 0.00 0.00 0.00 2.24
5925 7347 4.257731 GGAGGTGAGAAAAGATGTTCCTC 58.742 47.826 0.00 0.00 39.32 3.71
5970 7392 5.957798 TCGAGAAAGGCGATAAAAAGTCTA 58.042 37.500 0.00 0.00 32.09 2.59
6302 7730 5.186996 ACCATAGCAAACAGTTTGAGTTG 57.813 39.130 27.16 18.55 43.26 3.16
6323 7751 8.189119 AGTTGCTGGAAGGTTAAAATGATTTA 57.811 30.769 0.00 0.00 0.00 1.40
6325 7753 9.435688 GTTGCTGGAAGGTTAAAATGATTTATT 57.564 29.630 0.00 0.00 31.33 1.40
6380 7808 1.069765 CTGGAGTGTTGGACAGCGT 59.930 57.895 0.00 0.00 0.00 5.07
6572 8000 0.397941 ACAGTGACAGGGTCATGGTG 59.602 55.000 0.00 4.07 44.63 4.17
6590 8018 2.934553 GGTGCTTTCCTACGGTATGTTC 59.065 50.000 0.00 0.00 0.00 3.18
6630 8063 9.553064 AGTCATGTATCAAGTAATGAAATCTCC 57.447 33.333 0.00 0.00 42.54 3.71
6639 8072 5.755849 AGTAATGAAATCTCCGGTCCATTT 58.244 37.500 0.00 4.51 0.00 2.32
6732 8165 7.436673 ACTTAATAGATTTGATGACGAGTGCTC 59.563 37.037 0.00 0.00 0.00 4.26
6887 8320 3.195610 TCTGTGTCGAGGCATGATAAACT 59.804 43.478 0.00 0.00 0.00 2.66
6912 8345 7.265647 AGATGAGCAATTCAATCAAGAGATG 57.734 36.000 0.00 0.00 39.77 2.90
6920 8354 7.013083 GCAATTCAATCAAGAGATGTGAGGTAT 59.987 37.037 0.00 0.00 33.90 2.73
6945 8379 6.957631 TGAAAGATTGTTATCCCAGCTTCTA 58.042 36.000 0.00 0.00 0.00 2.10
6946 8380 7.402054 TGAAAGATTGTTATCCCAGCTTCTAA 58.598 34.615 0.00 0.00 0.00 2.10
6951 8385 9.259832 AGATTGTTATCCCAGCTTCTAAAATTT 57.740 29.630 0.00 0.00 0.00 1.82
6952 8386 9.875691 GATTGTTATCCCAGCTTCTAAAATTTT 57.124 29.630 8.75 8.75 0.00 1.82
6972 8406 9.956720 AAATTTTTCATCTGTAACAAGACTGAG 57.043 29.630 0.00 0.00 31.74 3.35
7009 8443 3.561143 TGCTGGTTGGTGAAATTACTGT 58.439 40.909 0.00 0.00 0.00 3.55
7010 8444 3.317711 TGCTGGTTGGTGAAATTACTGTG 59.682 43.478 0.00 0.00 0.00 3.66
7030 8464 6.587990 ACTGTGAATAAAGAAGACATCGACAG 59.412 38.462 0.00 0.00 0.00 3.51
7044 8478 4.754618 ACATCGACAGCAATGTAAAGTTGA 59.245 37.500 0.00 0.00 34.42 3.18
7082 8517 8.613922 AATTTTTGGAGATAAGGTTGATGGAT 57.386 30.769 0.00 0.00 0.00 3.41
7106 8541 5.682659 AGAACTAGCTCAAGATGCATTGAT 58.317 37.500 0.00 0.00 38.47 2.57
7123 8558 5.740224 GCATTGATTCGAGTCCTCCAAGATA 60.740 44.000 5.38 0.00 0.00 1.98
7151 8586 6.908870 TGTCAACAAGGATATTGAGATTCG 57.091 37.500 0.00 0.00 35.55 3.34
7156 8591 5.185454 ACAAGGATATTGAGATTCGTTGCA 58.815 37.500 0.00 0.00 38.27 4.08
7167 8602 5.991606 TGAGATTCGTTGCATAAGGGAATAG 59.008 40.000 0.00 0.00 0.00 1.73
7190 8625 4.067972 GGATCCACCTTTAGCGTGATAA 57.932 45.455 6.95 0.00 32.77 1.75
7219 8654 8.954350 GGTACACTTCATCTGTAAGTTCTACTA 58.046 37.037 0.00 0.00 34.99 1.82
7262 8697 4.284490 AGAAGTGTCAAGATGCCAGTAGAA 59.716 41.667 0.00 0.00 0.00 2.10
7263 8698 4.623932 AGTGTCAAGATGCCAGTAGAAA 57.376 40.909 0.00 0.00 0.00 2.52
7264 8699 4.319177 AGTGTCAAGATGCCAGTAGAAAC 58.681 43.478 0.00 0.00 0.00 2.78
7265 8700 4.065088 GTGTCAAGATGCCAGTAGAAACA 58.935 43.478 0.00 0.00 0.00 2.83
7266 8701 4.697352 GTGTCAAGATGCCAGTAGAAACAT 59.303 41.667 0.00 0.00 0.00 2.71
7267 8702 4.937620 TGTCAAGATGCCAGTAGAAACATC 59.062 41.667 0.00 0.00 39.35 3.06
7290 8725 2.307496 TCCCAAGGCATGTGACAAAT 57.693 45.000 0.00 0.00 0.00 2.32
7300 8735 9.800433 CAAGGCATGTGACAAATAATTATTACA 57.200 29.630 11.07 11.55 0.00 2.41
7322 8757 9.727859 TTACAATGTACCTTGTGCTAAATAAGA 57.272 29.630 22.24 0.44 39.60 2.10
7385 8820 6.374417 AGATAGTGCCAAGAACCTTTTAGA 57.626 37.500 0.00 0.00 0.00 2.10
7396 8831 9.487790 CCAAGAACCTTTTAGAATTTTATGCAA 57.512 29.630 0.00 0.00 0.00 4.08
7413 8848 4.389890 TGCAATGAAGTTGTGCTTTCTT 57.610 36.364 0.00 0.00 40.07 2.52
7414 8849 4.362279 TGCAATGAAGTTGTGCTTTCTTC 58.638 39.130 0.00 0.00 40.07 2.87
7423 8858 6.259550 AGTTGTGCTTTCTTCATATGTTCC 57.740 37.500 1.90 0.00 0.00 3.62
7425 8860 6.150140 AGTTGTGCTTTCTTCATATGTTCCTC 59.850 38.462 1.90 0.00 0.00 3.71
7472 8962 0.907486 CTCCAGGATTCTCCACAGCA 59.093 55.000 0.00 0.00 39.61 4.41
7485 8975 5.488341 TCTCCACAGCAAAGAACTATTACC 58.512 41.667 0.00 0.00 0.00 2.85
7496 8986 6.466885 AAGAACTATTACCGCTGATACTGT 57.533 37.500 0.00 0.00 0.00 3.55
7502 8992 3.693245 CGCTGATACTGTGCGGTC 58.307 61.111 2.69 0.00 45.07 4.79
7523 9013 1.293924 GCAGATCTCATTGGGTCACG 58.706 55.000 0.00 0.00 0.00 4.35
7524 9014 1.945387 CAGATCTCATTGGGTCACGG 58.055 55.000 0.00 0.00 0.00 4.94
7572 9062 3.538591 TGCCTCTGCACTGATTAATCTG 58.461 45.455 17.92 17.92 44.23 2.90
7584 9074 6.703607 CACTGATTAATCTGTCCATACCTCAC 59.296 42.308 21.24 0.00 36.94 3.51
7592 9082 4.716287 TCTGTCCATACCTCACATGATTGA 59.284 41.667 0.00 0.00 0.00 2.57
7643 9133 6.946009 TCAAAATCCCTTTTCAGTACCTTAGG 59.054 38.462 0.00 0.00 32.21 2.69
7660 9150 1.325355 AGGGCATAGCAACATCATGC 58.675 50.000 0.00 0.00 46.78 4.06
7678 9168 0.462759 GCCTAGACATGTGCCCAGAC 60.463 60.000 1.15 0.00 0.00 3.51
7684 9174 3.412386 AGACATGTGCCCAGACTAAAAC 58.588 45.455 1.15 0.00 0.00 2.43
7685 9175 2.151202 ACATGTGCCCAGACTAAAACG 58.849 47.619 0.00 0.00 0.00 3.60
7692 9182 1.523758 CCAGACTAAAACGCCAAGCT 58.476 50.000 0.00 0.00 0.00 3.74
7723 9213 7.812306 ACCAGTTTATTATGGGCATACTTACT 58.188 34.615 0.00 0.00 41.13 2.24
7747 9237 7.550906 ACTGATTTCTCCAATTAGTCTTAGTGC 59.449 37.037 0.00 0.00 37.15 4.40
7777 9267 5.507985 GCACCTAAACTCAACAGAAATGCTT 60.508 40.000 0.00 0.00 0.00 3.91
7795 9285 5.422666 TGCTTAACATGAACAAGTGACAG 57.577 39.130 0.00 0.00 0.00 3.51
7820 9310 8.043113 AGATAGTAAACTGCATCATCTTTCACA 58.957 33.333 0.00 0.00 0.00 3.58
7828 9318 7.211573 ACTGCATCATCTTTCACATTTCAAAA 58.788 30.769 0.00 0.00 0.00 2.44
7829 9319 7.170320 ACTGCATCATCTTTCACATTTCAAAAC 59.830 33.333 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.323629 TAGGACGAACTTGCCCTTGG 59.676 55.000 0.00 0.00 0.00 3.61
9 10 2.178912 TTAGGACGAACTTGCCCTTG 57.821 50.000 0.00 0.00 0.00 3.61
10 11 2.943036 TTTAGGACGAACTTGCCCTT 57.057 45.000 0.00 0.00 0.00 3.95
11 12 3.009143 AGAATTTAGGACGAACTTGCCCT 59.991 43.478 0.00 0.00 0.00 5.19
12 13 3.344515 AGAATTTAGGACGAACTTGCCC 58.655 45.455 0.00 0.00 0.00 5.36
15 16 8.934507 ATTCTAGAGAATTTAGGACGAACTTG 57.065 34.615 0.00 0.00 41.64 3.16
28 29 6.183360 GCCAAGGCATGAAATTCTAGAGAATT 60.183 38.462 11.01 11.01 46.32 2.17
29 30 5.301298 GCCAAGGCATGAAATTCTAGAGAAT 59.699 40.000 6.14 0.00 42.53 2.40
30 31 4.641989 GCCAAGGCATGAAATTCTAGAGAA 59.358 41.667 6.14 0.00 41.49 2.87
31 32 4.080129 AGCCAAGGCATGAAATTCTAGAGA 60.080 41.667 14.40 0.00 44.88 3.10
32 33 4.205587 AGCCAAGGCATGAAATTCTAGAG 58.794 43.478 14.40 0.00 44.88 2.43
33 34 4.240881 AGCCAAGGCATGAAATTCTAGA 57.759 40.909 14.40 0.00 44.88 2.43
34 35 4.276926 GGTAGCCAAGGCATGAAATTCTAG 59.723 45.833 14.40 0.00 44.88 2.43
35 36 4.207165 GGTAGCCAAGGCATGAAATTCTA 58.793 43.478 14.40 0.00 44.88 2.10
36 37 3.026694 GGTAGCCAAGGCATGAAATTCT 58.973 45.455 14.40 0.00 44.88 2.40
37 38 2.223572 CGGTAGCCAAGGCATGAAATTC 60.224 50.000 14.40 0.00 44.88 2.17
38 39 1.750778 CGGTAGCCAAGGCATGAAATT 59.249 47.619 14.40 0.00 44.88 1.82
39 40 1.340991 ACGGTAGCCAAGGCATGAAAT 60.341 47.619 14.40 0.00 44.88 2.17
40 41 0.037590 ACGGTAGCCAAGGCATGAAA 59.962 50.000 14.40 0.00 44.88 2.69
41 42 0.676466 CACGGTAGCCAAGGCATGAA 60.676 55.000 14.40 0.00 44.88 2.57
42 43 1.078497 CACGGTAGCCAAGGCATGA 60.078 57.895 14.40 0.00 44.88 3.07
43 44 2.764314 GCACGGTAGCCAAGGCATG 61.764 63.158 14.40 4.64 44.88 4.06
44 45 2.438434 GCACGGTAGCCAAGGCAT 60.438 61.111 14.40 1.19 44.88 4.40
52 53 1.135402 CATTTTTCCTGGCACGGTAGC 60.135 52.381 0.00 0.00 0.00 3.58
53 54 1.135402 GCATTTTTCCTGGCACGGTAG 60.135 52.381 0.00 0.00 0.00 3.18
54 55 0.885196 GCATTTTTCCTGGCACGGTA 59.115 50.000 0.00 0.00 0.00 4.02
55 56 1.112315 TGCATTTTTCCTGGCACGGT 61.112 50.000 0.00 0.00 0.00 4.83
56 57 0.667184 GTGCATTTTTCCTGGCACGG 60.667 55.000 0.00 0.00 45.84 4.94
57 58 2.813100 GTGCATTTTTCCTGGCACG 58.187 52.632 0.00 0.00 45.84 5.34
59 60 1.422531 AAGGTGCATTTTTCCTGGCA 58.577 45.000 0.00 0.00 0.00 4.92
60 61 3.893326 ATAAGGTGCATTTTTCCTGGC 57.107 42.857 0.00 0.00 0.00 4.85
61 62 8.912988 TCTTTATATAAGGTGCATTTTTCCTGG 58.087 33.333 4.68 0.00 0.00 4.45
69 70 9.125026 CCTCTGTTTCTTTATATAAGGTGCATT 57.875 33.333 4.68 0.00 0.00 3.56
70 71 7.721399 CCCTCTGTTTCTTTATATAAGGTGCAT 59.279 37.037 4.68 0.00 0.00 3.96
71 72 7.054124 CCCTCTGTTTCTTTATATAAGGTGCA 58.946 38.462 4.68 0.00 0.00 4.57
72 73 7.280356 TCCCTCTGTTTCTTTATATAAGGTGC 58.720 38.462 4.68 0.00 0.00 5.01
73 74 8.487028 ACTCCCTCTGTTTCTTTATATAAGGTG 58.513 37.037 4.68 0.00 0.00 4.00
74 75 8.625467 ACTCCCTCTGTTTCTTTATATAAGGT 57.375 34.615 4.68 0.00 0.00 3.50
83 84 9.454859 CTTGATTATTACTCCCTCTGTTTCTTT 57.545 33.333 0.00 0.00 0.00 2.52
84 85 8.826765 TCTTGATTATTACTCCCTCTGTTTCTT 58.173 33.333 0.00 0.00 0.00 2.52
85 86 8.380742 TCTTGATTATTACTCCCTCTGTTTCT 57.619 34.615 0.00 0.00 0.00 2.52
86 87 9.050601 CATCTTGATTATTACTCCCTCTGTTTC 57.949 37.037 0.00 0.00 0.00 2.78
87 88 8.552296 ACATCTTGATTATTACTCCCTCTGTTT 58.448 33.333 0.00 0.00 0.00 2.83
88 89 8.095452 ACATCTTGATTATTACTCCCTCTGTT 57.905 34.615 0.00 0.00 0.00 3.16
89 90 7.202047 GGACATCTTGATTATTACTCCCTCTGT 60.202 40.741 0.00 0.00 0.00 3.41
90 91 7.158021 GGACATCTTGATTATTACTCCCTCTG 58.842 42.308 0.00 0.00 0.00 3.35
91 92 6.846505 TGGACATCTTGATTATTACTCCCTCT 59.153 38.462 0.00 0.00 0.00 3.69
92 93 7.067496 TGGACATCTTGATTATTACTCCCTC 57.933 40.000 0.00 0.00 0.00 4.30
93 94 6.617371 ACTGGACATCTTGATTATTACTCCCT 59.383 38.462 0.00 0.00 0.00 4.20
94 95 6.831976 ACTGGACATCTTGATTATTACTCCC 58.168 40.000 0.00 0.00 0.00 4.30
95 96 7.770897 ACAACTGGACATCTTGATTATTACTCC 59.229 37.037 0.00 0.00 0.00 3.85
96 97 8.607459 CACAACTGGACATCTTGATTATTACTC 58.393 37.037 0.00 0.00 0.00 2.59
97 98 8.321353 TCACAACTGGACATCTTGATTATTACT 58.679 33.333 0.00 0.00 0.00 2.24
98 99 8.492673 TCACAACTGGACATCTTGATTATTAC 57.507 34.615 0.00 0.00 0.00 1.89
99 100 8.539544 TCTCACAACTGGACATCTTGATTATTA 58.460 33.333 0.00 0.00 0.00 0.98
100 101 7.397221 TCTCACAACTGGACATCTTGATTATT 58.603 34.615 0.00 0.00 0.00 1.40
101 102 6.950842 TCTCACAACTGGACATCTTGATTAT 58.049 36.000 0.00 0.00 0.00 1.28
102 103 6.358974 TCTCACAACTGGACATCTTGATTA 57.641 37.500 0.00 0.00 0.00 1.75
103 104 5.233083 TCTCACAACTGGACATCTTGATT 57.767 39.130 0.00 0.00 0.00 2.57
104 105 4.897509 TCTCACAACTGGACATCTTGAT 57.102 40.909 0.00 0.00 0.00 2.57
105 106 4.503817 CCTTCTCACAACTGGACATCTTGA 60.504 45.833 0.00 0.00 0.00 3.02
106 107 3.750130 CCTTCTCACAACTGGACATCTTG 59.250 47.826 0.00 0.00 0.00 3.02
107 108 3.808618 GCCTTCTCACAACTGGACATCTT 60.809 47.826 0.00 0.00 0.00 2.40
108 109 2.289945 GCCTTCTCACAACTGGACATCT 60.290 50.000 0.00 0.00 0.00 2.90
109 110 2.079925 GCCTTCTCACAACTGGACATC 58.920 52.381 0.00 0.00 0.00 3.06
110 111 1.421268 TGCCTTCTCACAACTGGACAT 59.579 47.619 0.00 0.00 0.00 3.06
111 112 0.836606 TGCCTTCTCACAACTGGACA 59.163 50.000 0.00 0.00 0.00 4.02
112 113 1.967319 TTGCCTTCTCACAACTGGAC 58.033 50.000 0.00 0.00 0.00 4.02
113 114 2.727123 TTTGCCTTCTCACAACTGGA 57.273 45.000 0.00 0.00 0.00 3.86
114 115 4.053295 CAAATTTGCCTTCTCACAACTGG 58.947 43.478 5.01 0.00 0.00 4.00
115 116 4.935702 TCAAATTTGCCTTCTCACAACTG 58.064 39.130 13.54 0.00 0.00 3.16
116 117 4.889409 TCTCAAATTTGCCTTCTCACAACT 59.111 37.500 13.54 0.00 0.00 3.16
117 118 4.978580 GTCTCAAATTTGCCTTCTCACAAC 59.021 41.667 13.54 0.00 0.00 3.32
118 119 4.889409 AGTCTCAAATTTGCCTTCTCACAA 59.111 37.500 13.54 0.00 0.00 3.33
119 120 4.464008 AGTCTCAAATTTGCCTTCTCACA 58.536 39.130 13.54 0.00 0.00 3.58
120 121 5.009010 TCAAGTCTCAAATTTGCCTTCTCAC 59.991 40.000 13.54 2.42 0.00 3.51
121 122 5.009010 GTCAAGTCTCAAATTTGCCTTCTCA 59.991 40.000 13.54 0.00 0.00 3.27
122 123 5.456265 GTCAAGTCTCAAATTTGCCTTCTC 58.544 41.667 13.54 6.74 0.00 2.87
123 124 4.279420 GGTCAAGTCTCAAATTTGCCTTCT 59.721 41.667 13.54 6.30 0.00 2.85
124 125 4.550422 GGTCAAGTCTCAAATTTGCCTTC 58.450 43.478 13.54 4.24 0.00 3.46
125 126 3.004734 CGGTCAAGTCTCAAATTTGCCTT 59.995 43.478 13.54 11.47 0.00 4.35
126 127 2.554032 CGGTCAAGTCTCAAATTTGCCT 59.446 45.455 13.54 6.21 0.00 4.75
127 128 2.351738 CCGGTCAAGTCTCAAATTTGCC 60.352 50.000 13.54 5.35 0.00 4.52
128 129 2.293399 ACCGGTCAAGTCTCAAATTTGC 59.707 45.455 13.54 0.00 0.00 3.68
129 130 3.563808 TGACCGGTCAAGTCTCAAATTTG 59.436 43.478 34.60 12.15 36.53 2.32
130 131 3.815401 CTGACCGGTCAAGTCTCAAATTT 59.185 43.478 35.36 0.00 39.39 1.82
131 132 3.181454 ACTGACCGGTCAAGTCTCAAATT 60.181 43.478 35.36 10.36 39.39 1.82
132 133 2.368875 ACTGACCGGTCAAGTCTCAAAT 59.631 45.455 35.36 11.50 39.39 2.32
133 134 1.760613 ACTGACCGGTCAAGTCTCAAA 59.239 47.619 35.36 11.80 39.39 2.69
134 135 1.068588 CACTGACCGGTCAAGTCTCAA 59.931 52.381 35.36 12.54 39.39 3.02
135 136 0.673985 CACTGACCGGTCAAGTCTCA 59.326 55.000 35.36 13.93 39.39 3.27
136 137 0.674534 ACACTGACCGGTCAAGTCTC 59.325 55.000 35.36 9.57 39.39 3.36
137 138 0.674534 GACACTGACCGGTCAAGTCT 59.325 55.000 37.73 26.60 39.53 3.24
138 139 0.319641 GGACACTGACCGGTCAAGTC 60.320 60.000 37.61 37.61 40.75 3.01
139 140 1.746517 GGACACTGACCGGTCAAGT 59.253 57.895 35.36 33.10 39.39 3.16
140 141 1.372997 CGGACACTGACCGGTCAAG 60.373 63.158 35.36 30.45 45.65 3.02
141 142 2.732016 CGGACACTGACCGGTCAA 59.268 61.111 35.36 20.35 45.65 3.18
147 148 1.374252 ATGTTCGCGGACACTGACC 60.374 57.895 25.17 0.00 31.30 4.02
148 149 1.781555 CATGTTCGCGGACACTGAC 59.218 57.895 25.17 2.80 31.30 3.51
149 150 2.027073 GCATGTTCGCGGACACTGA 61.027 57.895 25.17 0.00 31.30 3.41
150 151 2.476051 GCATGTTCGCGGACACTG 59.524 61.111 25.17 21.53 31.30 3.66
151 152 2.742372 GGCATGTTCGCGGACACT 60.742 61.111 25.17 9.58 31.30 3.55
152 153 3.799755 GGGCATGTTCGCGGACAC 61.800 66.667 25.17 11.36 31.30 3.67
182 183 2.814913 ATTCGACCCCTGAAACGCCC 62.815 60.000 0.00 0.00 0.00 6.13
183 184 0.958876 AATTCGACCCCTGAAACGCC 60.959 55.000 0.00 0.00 0.00 5.68
184 185 0.879090 AAATTCGACCCCTGAAACGC 59.121 50.000 0.00 0.00 0.00 4.84
185 186 1.401018 GCAAATTCGACCCCTGAAACG 60.401 52.381 0.00 0.00 0.00 3.60
186 187 1.611491 TGCAAATTCGACCCCTGAAAC 59.389 47.619 0.00 0.00 0.00 2.78
187 188 1.988293 TGCAAATTCGACCCCTGAAA 58.012 45.000 0.00 0.00 0.00 2.69
188 189 1.988293 TTGCAAATTCGACCCCTGAA 58.012 45.000 0.00 0.00 0.00 3.02
189 190 1.885887 CTTTGCAAATTCGACCCCTGA 59.114 47.619 13.23 0.00 0.00 3.86
190 191 1.613437 ACTTTGCAAATTCGACCCCTG 59.387 47.619 13.23 0.00 0.00 4.45
191 192 1.886542 GACTTTGCAAATTCGACCCCT 59.113 47.619 13.23 0.00 0.00 4.79
192 193 1.611491 TGACTTTGCAAATTCGACCCC 59.389 47.619 20.53 1.85 0.00 4.95
193 194 3.308530 CTTGACTTTGCAAATTCGACCC 58.691 45.455 20.53 2.47 0.00 4.46
194 195 2.726241 GCTTGACTTTGCAAATTCGACC 59.274 45.455 20.53 9.79 0.00 4.79
195 196 3.423206 CAGCTTGACTTTGCAAATTCGAC 59.577 43.478 20.53 13.77 0.00 4.20
196 197 3.066621 ACAGCTTGACTTTGCAAATTCGA 59.933 39.130 20.53 18.38 0.00 3.71
197 198 3.374745 ACAGCTTGACTTTGCAAATTCG 58.625 40.909 20.53 9.64 0.00 3.34
198 199 5.280945 TGTACAGCTTGACTTTGCAAATTC 58.719 37.500 19.53 19.53 0.00 2.17
199 200 5.261209 TGTACAGCTTGACTTTGCAAATT 57.739 34.783 13.23 7.10 0.00 1.82
200 201 4.916983 TGTACAGCTTGACTTTGCAAAT 57.083 36.364 13.23 3.03 0.00 2.32
201 202 4.609947 CATGTACAGCTTGACTTTGCAAA 58.390 39.130 12.14 12.14 0.00 3.68
202 203 3.550639 GCATGTACAGCTTGACTTTGCAA 60.551 43.478 0.33 0.00 0.00 4.08
203 204 2.030893 GCATGTACAGCTTGACTTTGCA 60.031 45.455 0.33 0.00 0.00 4.08
204 205 2.227388 AGCATGTACAGCTTGACTTTGC 59.773 45.455 12.32 8.63 39.87 3.68
213 214 4.177026 CGACTCTTAAAGCATGTACAGCT 58.823 43.478 12.32 12.32 45.97 4.24
214 215 3.927142 ACGACTCTTAAAGCATGTACAGC 59.073 43.478 0.33 5.47 0.00 4.40
215 216 4.263209 CGACGACTCTTAAAGCATGTACAG 59.737 45.833 0.33 0.00 0.00 2.74
220 221 3.178618 CGATCGACGACTCTTAAAGCATG 59.821 47.826 10.26 0.00 45.77 4.06
234 235 6.199531 TCAAAATTACCCTTAATCGATCGACG 59.800 38.462 22.06 9.11 44.09 5.12
237 238 6.259167 TGGTCAAAATTACCCTTAATCGATCG 59.741 38.462 9.36 9.36 36.06 3.69
341 342 9.171877 GCAAATAAGGGAAGATATATCAAGGAG 57.828 37.037 15.08 0.00 0.00 3.69
357 358 3.962718 ACATGAATGAGGGCAAATAAGGG 59.037 43.478 0.00 0.00 0.00 3.95
369 370 9.669353 GTATAGCACCATTAAAACATGAATGAG 57.331 33.333 0.00 0.00 35.46 2.90
370 371 9.183368 TGTATAGCACCATTAAAACATGAATGA 57.817 29.630 0.00 0.00 35.46 2.57
371 372 9.970395 ATGTATAGCACCATTAAAACATGAATG 57.030 29.630 0.00 0.00 33.63 2.67
388 389 7.929245 TCGCAAATAAGGAAGTAATGTATAGCA 59.071 33.333 0.00 0.00 0.00 3.49
456 459 7.746703 ACTCTTACCTTTTGTGGAAGTAAGAT 58.253 34.615 10.39 1.35 33.72 2.40
463 466 9.667107 CTCATATTACTCTTACCTTTTGTGGAA 57.333 33.333 0.00 0.00 0.00 3.53
471 474 7.876936 TCACGACTCATATTACTCTTACCTT 57.123 36.000 0.00 0.00 0.00 3.50
621 644 3.190738 TTGGTTCCGGCTGGTGAGG 62.191 63.158 12.43 0.00 36.30 3.86
644 667 0.387622 TCGTTTTCCTCGTACAGGCG 60.388 55.000 6.51 5.19 43.08 5.52
692 715 4.951094 GGTAGAAGAAGAGAAGAGCAGGTA 59.049 45.833 0.00 0.00 0.00 3.08
712 735 1.727215 GGGGAGGATCGGAGGAGGTA 61.727 65.000 0.00 0.00 34.37 3.08
713 736 2.609920 GGGAGGATCGGAGGAGGT 59.390 66.667 0.00 0.00 34.37 3.85
714 737 2.203714 GGGGAGGATCGGAGGAGG 60.204 72.222 0.00 0.00 34.37 4.30
715 738 1.834822 GTGGGGAGGATCGGAGGAG 60.835 68.421 0.00 0.00 34.37 3.69
716 739 2.282446 GTGGGGAGGATCGGAGGA 59.718 66.667 0.00 0.00 34.37 3.71
717 740 2.041922 TGTGGGGAGGATCGGAGG 60.042 66.667 0.00 0.00 34.37 4.30
718 741 2.786495 CGTGTGGGGAGGATCGGAG 61.786 68.421 0.00 0.00 34.37 4.63
719 742 2.758327 CGTGTGGGGAGGATCGGA 60.758 66.667 0.00 0.00 34.37 4.55
720 743 2.758327 TCGTGTGGGGAGGATCGG 60.758 66.667 0.00 0.00 34.37 4.18
721 744 1.605058 AACTCGTGTGGGGAGGATCG 61.605 60.000 0.00 0.00 35.82 3.69
722 745 0.175989 GAACTCGTGTGGGGAGGATC 59.824 60.000 0.00 0.00 35.82 3.36
723 746 1.605058 CGAACTCGTGTGGGGAGGAT 61.605 60.000 0.00 0.00 35.82 3.24
826 854 0.967887 TGTCTGAGGAGAGAAGGCCG 60.968 60.000 0.00 0.00 0.00 6.13
829 857 3.774216 AGGATTTGTCTGAGGAGAGAAGG 59.226 47.826 0.00 0.00 33.28 3.46
837 865 1.827969 AGACGGAGGATTTGTCTGAGG 59.172 52.381 0.00 0.00 41.21 3.86
924 973 7.991460 GGGAAGCCACTTGTTTATAGTAGTAAT 59.009 37.037 0.00 0.00 0.00 1.89
925 974 7.181485 AGGGAAGCCACTTGTTTATAGTAGTAA 59.819 37.037 0.00 0.00 0.00 2.24
928 977 5.990668 AGGGAAGCCACTTGTTTATAGTAG 58.009 41.667 0.00 0.00 0.00 2.57
1046 1104 4.502604 CGTCTTCCTCCTTACCAAGAAACA 60.503 45.833 0.00 0.00 0.00 2.83
1047 1105 3.995048 CGTCTTCCTCCTTACCAAGAAAC 59.005 47.826 0.00 0.00 0.00 2.78
1049 1107 2.565834 CCGTCTTCCTCCTTACCAAGAA 59.434 50.000 0.00 0.00 0.00 2.52
1053 1111 0.410663 TCCCGTCTTCCTCCTTACCA 59.589 55.000 0.00 0.00 0.00 3.25
1080 1142 7.574607 AGGGTTTACAAGAAGAAGAGAAAGAA 58.425 34.615 0.00 0.00 0.00 2.52
1081 1143 7.138054 AGGGTTTACAAGAAGAAGAGAAAGA 57.862 36.000 0.00 0.00 0.00 2.52
1085 1147 5.510861 CGGAAGGGTTTACAAGAAGAAGAGA 60.511 44.000 0.00 0.00 0.00 3.10
1181 1244 2.979676 CCTGCCACACACACGCAT 60.980 61.111 0.00 0.00 0.00 4.73
1240 1303 3.522731 CGAGGGTGAGGGAGAGCG 61.523 72.222 0.00 0.00 0.00 5.03
1242 1305 3.522731 CGCGAGGGTGAGGGAGAG 61.523 72.222 0.00 0.00 0.00 3.20
1243 1306 4.361971 ACGCGAGGGTGAGGGAGA 62.362 66.667 15.93 0.00 0.00 3.71
1244 1307 3.827898 GACGCGAGGGTGAGGGAG 61.828 72.222 15.93 0.00 0.00 4.30
1741 1813 1.201429 AATCAAGGGCTCCGACAGGT 61.201 55.000 0.00 0.00 39.05 4.00
1774 1846 2.716864 GGTAGAGCTCCGAGTCGC 59.283 66.667 10.93 0.00 0.00 5.19
1800 1872 2.669569 GGCGAGCTGGCTGAACAA 60.670 61.111 20.62 0.00 40.72 2.83
1916 1988 0.458025 CCTTGGAGAACCTACGCGAC 60.458 60.000 15.93 0.00 37.04 5.19
1919 1991 1.810030 CGCCTTGGAGAACCTACGC 60.810 63.158 0.00 0.00 37.04 4.42
2082 2154 0.091344 CGTACGAACGCAAAGAGCAG 59.909 55.000 10.44 0.00 46.13 4.24
2234 2306 4.884257 GCCATTAGCGCGGACCGA 62.884 66.667 20.50 0.00 40.02 4.69
2351 2423 2.186125 CAGCTGAGAGCATCGCCA 59.814 61.111 8.42 0.00 45.56 5.69
2780 2852 1.153823 CGTGAAGAGGGTACTGGCG 60.154 63.158 0.00 0.00 0.00 5.69
2931 3003 3.393970 TGGAAGCGCCCTCTCCAG 61.394 66.667 2.29 0.00 34.97 3.86
2932 3004 3.706373 GTGGAAGCGCCCTCTCCA 61.706 66.667 2.29 9.03 34.97 3.86
2944 3016 5.905331 ACCCTGATATCAGAGTTATGTGGAA 59.095 40.000 30.40 0.00 46.59 3.53
3009 3081 3.194861 CATTCCTTAGCGTCAAATCGGA 58.805 45.455 0.00 0.00 0.00 4.55
3086 3158 4.498177 GCATAAAGGAGCGAAGATTTTCCC 60.498 45.833 0.00 0.00 0.00 3.97
3110 3182 8.709272 ATGTTCTAGGTATCTCCCTAAGTAAC 57.291 38.462 0.00 0.00 36.66 2.50
3159 3231 8.953313 CATTCCATCTGCATAAAGAGCATATTA 58.047 33.333 0.00 0.00 41.82 0.98
3160 3232 7.668469 TCATTCCATCTGCATAAAGAGCATATT 59.332 33.333 0.00 0.00 41.82 1.28
3220 3432 7.328249 ACCTGCAAAATACAATGTTAACATTCG 59.672 33.333 27.12 22.97 44.10 3.34
3236 3448 4.279671 TCCAAATACGTCAACCTGCAAAAT 59.720 37.500 0.00 0.00 0.00 1.82
3277 3490 4.095483 CCACTCTGTATCCATGAGTTTTGC 59.905 45.833 0.00 0.00 38.80 3.68
3574 3790 5.358160 GCTTTCAGCATTACAGATTAAGGGT 59.642 40.000 0.00 0.00 41.89 4.34
3576 3792 6.690194 AGCTTTCAGCATTACAGATTAAGG 57.310 37.500 0.00 0.00 45.56 2.69
3595 3811 1.202290 CGTGTGGCAGAAAACAAGCTT 60.202 47.619 0.00 0.00 0.00 3.74
3689 5056 5.192927 TCAGTCAGAAATTCAACTTGGTGT 58.807 37.500 0.00 0.00 0.00 4.16
3776 5143 6.701841 CCGAATATTATGGTATGGAAGGATCG 59.298 42.308 0.00 0.00 0.00 3.69
3785 5152 7.615582 AGCAATCACCGAATATTATGGTATG 57.384 36.000 10.64 10.91 33.82 2.39
3789 5156 6.558771 TGAAGCAATCACCGAATATTATGG 57.441 37.500 4.96 4.96 31.50 2.74
3797 5164 1.879380 CCTGTTGAAGCAATCACCGAA 59.121 47.619 0.00 0.00 37.92 4.30
3808 5175 2.420022 CGCCTTCCATTACCTGTTGAAG 59.580 50.000 0.00 0.00 33.80 3.02
4030 5402 0.752376 GAAGGACCCCTCGTCGAGAT 60.752 60.000 23.74 8.49 42.99 2.75
4268 5640 1.068895 AGCAGCTGAAGATGGAGATCG 59.931 52.381 20.43 0.00 33.34 3.69
4441 5817 5.854010 TGGGCAACAACAATACAGTAAAA 57.146 34.783 0.00 0.00 39.74 1.52
4452 5828 7.907389 TGGTTAATATTATTTGGGCAACAACA 58.093 30.769 0.00 0.00 39.19 3.33
4459 5835 9.203421 GCTTGTTATGGTTAATATTATTTGGGC 57.797 33.333 0.00 0.00 0.00 5.36
4467 5843 7.008332 GGGGGTAGCTTGTTATGGTTAATATT 58.992 38.462 0.00 0.00 0.00 1.28
4469 5845 5.673113 AGGGGGTAGCTTGTTATGGTTAATA 59.327 40.000 0.00 0.00 0.00 0.98
4470 5846 4.480908 AGGGGGTAGCTTGTTATGGTTAAT 59.519 41.667 0.00 0.00 0.00 1.40
4471 5847 3.853784 AGGGGGTAGCTTGTTATGGTTAA 59.146 43.478 0.00 0.00 0.00 2.01
4480 5856 0.252375 TTACGGAGGGGGTAGCTTGT 60.252 55.000 0.00 0.00 0.00 3.16
4486 5862 7.075148 TCTTATATTTCTTTACGGAGGGGGTA 58.925 38.462 0.00 0.00 0.00 3.69
4487 5863 5.907079 TCTTATATTTCTTTACGGAGGGGGT 59.093 40.000 0.00 0.00 0.00 4.95
4488 5864 6.429521 TCTTATATTTCTTTACGGAGGGGG 57.570 41.667 0.00 0.00 0.00 5.40
4489 5865 5.932883 GCTCTTATATTTCTTTACGGAGGGG 59.067 44.000 0.00 0.00 0.00 4.79
4490 5866 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
4491 5867 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
4492 5868 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
4493 5869 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
4494 5870 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
4522 5898 6.952935 AAGAGCGTTTAGATCACTTTAGTG 57.047 37.500 3.47 3.47 46.91 2.74
4536 5912 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
4537 5913 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
4538 5914 7.069578 TCCCTCTGTAAAGAAATATAAGAGCGT 59.930 37.037 0.00 0.00 0.00 5.07
4539 5915 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
4540 5916 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
4546 5922 8.993424 ACATGTACTCCCTCTGTAAAGAAATAT 58.007 33.333 0.00 0.00 0.00 1.28
4547 5923 8.375493 ACATGTACTCCCTCTGTAAAGAAATA 57.625 34.615 0.00 0.00 0.00 1.40
4548 5924 7.259088 ACATGTACTCCCTCTGTAAAGAAAT 57.741 36.000 0.00 0.00 0.00 2.17
4549 5925 6.681729 ACATGTACTCCCTCTGTAAAGAAA 57.318 37.500 0.00 0.00 0.00 2.52
4550 5926 6.681729 AACATGTACTCCCTCTGTAAAGAA 57.318 37.500 0.00 0.00 0.00 2.52
4551 5927 7.973048 ATAACATGTACTCCCTCTGTAAAGA 57.027 36.000 0.00 0.00 0.00 2.52
4552 5928 9.099454 GAAATAACATGTACTCCCTCTGTAAAG 57.901 37.037 0.00 0.00 0.00 1.85
4553 5929 8.822805 AGAAATAACATGTACTCCCTCTGTAAA 58.177 33.333 0.00 0.00 0.00 2.01
4554 5930 8.375493 AGAAATAACATGTACTCCCTCTGTAA 57.625 34.615 0.00 0.00 0.00 2.41
4555 5931 7.839705 AGAGAAATAACATGTACTCCCTCTGTA 59.160 37.037 14.98 0.00 0.00 2.74
4556 5932 6.670027 AGAGAAATAACATGTACTCCCTCTGT 59.330 38.462 14.98 3.87 0.00 3.41
4557 5933 7.118496 AGAGAAATAACATGTACTCCCTCTG 57.882 40.000 14.98 0.00 0.00 3.35
4558 5934 8.062536 ACTAGAGAAATAACATGTACTCCCTCT 58.937 37.037 17.95 17.95 0.00 3.69
4559 5935 8.240267 ACTAGAGAAATAACATGTACTCCCTC 57.760 38.462 0.00 4.18 0.00 4.30
4560 5936 9.134055 GTACTAGAGAAATAACATGTACTCCCT 57.866 37.037 0.00 0.00 0.00 4.20
4561 5937 9.134055 AGTACTAGAGAAATAACATGTACTCCC 57.866 37.037 0.00 0.00 35.83 4.30
4568 5944 9.653067 CGTCACTAGTACTAGAGAAATAACATG 57.347 37.037 31.93 17.18 35.22 3.21
4573 5949 7.925483 GGACTCGTCACTAGTACTAGAGAAATA 59.075 40.741 31.93 17.70 35.22 1.40
4604 6001 3.920412 CCTGCAAAGAAATAAACCTTCGC 59.080 43.478 0.00 0.00 0.00 4.70
4616 6019 3.144657 TCTGATGAAGCCTGCAAAGAA 57.855 42.857 0.00 0.00 0.00 2.52
4676 6079 2.254546 TACTGCCAGTCACCACAAAG 57.745 50.000 0.00 0.00 0.00 2.77
4709 6112 0.324614 TACCCATGACCAGCACTGTG 59.675 55.000 2.76 2.76 0.00 3.66
4770 6173 5.036117 ACCTGAACATACACCATGGATAC 57.964 43.478 21.47 1.47 39.13 2.24
4808 6211 9.193806 AGTTTAATTGCTTGGATCAATGTAGAT 57.806 29.630 0.00 0.00 34.67 1.98
4810 6213 8.461222 TGAGTTTAATTGCTTGGATCAATGTAG 58.539 33.333 0.00 0.00 34.67 2.74
4832 6235 7.032598 TCTCCTTTGGATTAATTTCCTGAGT 57.967 36.000 0.00 0.00 36.68 3.41
4850 6253 5.738909 ACACATTTCATCGATCTTCTCCTT 58.261 37.500 0.00 0.00 0.00 3.36
4857 6260 5.482006 TCACAAGACACATTTCATCGATCT 58.518 37.500 0.00 0.00 0.00 2.75
4891 6296 9.361315 CAATATTTGAAAACAGAGCATCAATCA 57.639 29.630 0.00 0.00 37.82 2.57
4892 6297 9.577110 TCAATATTTGAAAACAGAGCATCAATC 57.423 29.630 0.00 0.00 35.04 2.67
4893 6298 9.932207 TTCAATATTTGAAAACAGAGCATCAAT 57.068 25.926 0.37 0.00 45.94 2.57
5088 6493 2.357637 CACCGTGTGGAAGAACATTGTT 59.642 45.455 0.63 0.63 39.21 2.83
5170 6575 6.368791 GGAACCAAAATAAGGAACAATGAAGC 59.631 38.462 0.00 0.00 0.00 3.86
5262 6680 5.106948 CGTAAGTGTTCATCAAATCTGCAGT 60.107 40.000 14.67 0.00 0.00 4.40
5284 6702 5.679734 CAAAGCCTGCAGATATATTTCGT 57.320 39.130 17.39 0.00 0.00 3.85
5323 6741 2.030946 CGCAGTCAGGCTTAAAGCATAC 59.969 50.000 0.00 0.00 44.75 2.39
5458 6876 2.093869 CCATGAAATTGGAGGCCTGTTG 60.094 50.000 12.00 0.00 39.25 3.33
5488 6906 5.707066 AATCTTGCAGGTCTATTCTTCCT 57.293 39.130 0.00 0.00 0.00 3.36
5708 7129 1.929836 CGGAACAGTGAGCTGATAAGC 59.070 52.381 0.00 0.00 45.28 3.09
5813 7234 5.974370 TGTAGGTTCTTGGGGGATAATACTT 59.026 40.000 0.00 0.00 0.00 2.24
5987 7409 9.612620 AGAAAGTTCATTTAACATGATTCGTTC 57.387 29.630 0.00 14.18 40.83 3.95
5990 7412 9.831737 AAGAGAAAGTTCATTTAACATGATTCG 57.168 29.630 0.00 0.00 40.83 3.34
6112 7534 6.263168 ACATGAAACTTGGAAGTGTTAGGAAG 59.737 38.462 0.00 0.00 39.66 3.46
6113 7535 6.126409 ACATGAAACTTGGAAGTGTTAGGAA 58.874 36.000 0.00 0.00 39.66 3.36
6114 7536 5.690865 ACATGAAACTTGGAAGTGTTAGGA 58.309 37.500 0.00 0.00 39.66 2.94
6115 7537 7.607991 AGATACATGAAACTTGGAAGTGTTAGG 59.392 37.037 0.00 0.00 39.66 2.69
6116 7538 8.446273 CAGATACATGAAACTTGGAAGTGTTAG 58.554 37.037 0.00 0.00 39.66 2.34
6117 7539 8.154203 TCAGATACATGAAACTTGGAAGTGTTA 58.846 33.333 0.00 0.00 39.66 2.41
6119 7541 6.428159 GTCAGATACATGAAACTTGGAAGTGT 59.572 38.462 0.00 0.00 39.66 3.55
6120 7542 6.652481 AGTCAGATACATGAAACTTGGAAGTG 59.348 38.462 0.00 0.00 39.66 3.16
6121 7543 6.773638 AGTCAGATACATGAAACTTGGAAGT 58.226 36.000 0.00 0.00 42.04 3.01
6124 7546 7.397476 AGTCTAGTCAGATACATGAAACTTGGA 59.603 37.037 0.00 0.00 32.09 3.53
6125 7547 7.551585 AGTCTAGTCAGATACATGAAACTTGG 58.448 38.462 0.00 0.00 32.09 3.61
6267 7695 7.199766 TGTTTGCTATGGTAAGTCTTTTGTTG 58.800 34.615 0.00 0.00 0.00 3.33
6277 7705 6.560253 ACTCAAACTGTTTGCTATGGTAAG 57.440 37.500 24.62 17.02 40.43 2.34
6302 7730 8.478066 AGGAATAAATCATTTTAACCTTCCAGC 58.522 33.333 9.97 0.00 36.90 4.85
6619 8052 3.954258 GGAAATGGACCGGAGATTTCATT 59.046 43.478 25.13 12.80 0.00 2.57
6630 8063 2.700897 AGAGACTATGGGAAATGGACCG 59.299 50.000 0.00 0.00 0.00 4.79
6703 8136 8.323854 CACTCGTCATCAAATCTATTAAGTGTG 58.676 37.037 0.00 0.00 0.00 3.82
6711 8144 5.268118 TGAGCACTCGTCATCAAATCTAT 57.732 39.130 0.00 0.00 0.00 1.98
6732 8165 5.482908 AGAAGCTTACCTGTACAAGTCATG 58.517 41.667 0.00 0.00 0.00 3.07
6887 8320 7.991460 ACATCTCTTGATTGAATTGCTCATCTA 59.009 33.333 0.00 0.00 32.78 1.98
6912 8345 7.556275 TGGGATAACAATCTTTCAATACCTCAC 59.444 37.037 0.00 0.00 0.00 3.51
6920 8354 6.248433 AGAAGCTGGGATAACAATCTTTCAA 58.752 36.000 0.00 0.00 0.00 2.69
6946 8380 9.956720 CTCAGTCTTGTTACAGATGAAAAATTT 57.043 29.630 0.00 0.00 0.00 1.82
6951 8385 5.858381 AGCTCAGTCTTGTTACAGATGAAA 58.142 37.500 0.00 0.00 0.00 2.69
6952 8386 5.474578 AGCTCAGTCTTGTTACAGATGAA 57.525 39.130 0.00 0.00 0.00 2.57
6953 8387 5.233225 CAAGCTCAGTCTTGTTACAGATGA 58.767 41.667 0.00 0.00 38.81 2.92
6972 8406 2.079925 CAGCAAGGTAGGAAGACAAGC 58.920 52.381 0.00 0.00 0.00 4.01
7009 8443 5.478407 TGCTGTCGATGTCTTCTTTATTCA 58.522 37.500 0.00 0.00 0.00 2.57
7010 8444 6.408858 TTGCTGTCGATGTCTTCTTTATTC 57.591 37.500 0.00 0.00 0.00 1.75
7026 8460 6.073058 TCACTGATCAACTTTACATTGCTGTC 60.073 38.462 0.00 0.00 36.79 3.51
7030 8464 6.032094 CCATCACTGATCAACTTTACATTGC 58.968 40.000 0.00 0.00 0.00 3.56
7044 8478 5.246656 TCTCCAAAAATTTGCCATCACTGAT 59.753 36.000 0.29 0.00 36.86 2.90
7082 8517 6.225981 TCAATGCATCTTGAGCTAGTTCTA 57.774 37.500 8.15 0.00 31.65 2.10
7106 8541 3.096852 TGCTTATCTTGGAGGACTCGAA 58.903 45.455 0.00 0.00 0.00 3.71
7123 8558 6.182627 TCTCAATATCCTTGTTGACATGCTT 58.817 36.000 0.00 0.00 30.78 3.91
7151 8586 5.221925 TGGATCCTCTATTCCCTTATGCAAC 60.222 44.000 14.23 0.00 0.00 4.17
7156 8591 5.376653 AGGTGGATCCTCTATTCCCTTAT 57.623 43.478 14.23 0.00 44.42 1.73
7183 8618 6.535150 ACAGATGAAGTGTACCATTTATCACG 59.465 38.462 11.85 7.01 36.16 4.35
7190 8625 7.680730 AGAACTTACAGATGAAGTGTACCATT 58.319 34.615 0.00 0.00 37.22 3.16
7239 8674 3.834813 TCTACTGGCATCTTGACACTTCT 59.165 43.478 0.00 0.00 28.59 2.85
7262 8697 3.007182 CACATGCCTTGGGAAAAGATGTT 59.993 43.478 0.00 0.00 0.00 2.71
7263 8698 2.564062 CACATGCCTTGGGAAAAGATGT 59.436 45.455 0.00 0.00 0.00 3.06
7264 8699 2.827322 TCACATGCCTTGGGAAAAGATG 59.173 45.455 0.00 0.00 33.81 2.90
7265 8700 2.827921 GTCACATGCCTTGGGAAAAGAT 59.172 45.455 0.00 0.00 40.19 2.40
7266 8701 2.238521 GTCACATGCCTTGGGAAAAGA 58.761 47.619 0.00 0.00 40.19 2.52
7267 8702 1.962807 TGTCACATGCCTTGGGAAAAG 59.037 47.619 0.00 0.00 40.19 2.27
7268 8703 2.079170 TGTCACATGCCTTGGGAAAA 57.921 45.000 0.00 0.00 40.19 2.29
7271 8706 2.307496 ATTTGTCACATGCCTTGGGA 57.693 45.000 0.00 0.00 34.56 4.37
7300 8735 8.686334 CCAATCTTATTTAGCACAAGGTACATT 58.314 33.333 0.00 0.00 0.00 2.71
7301 8736 7.834181 ACCAATCTTATTTAGCACAAGGTACAT 59.166 33.333 0.00 0.00 0.00 2.29
7312 8747 5.507974 GCGGTACAACCAATCTTATTTAGC 58.492 41.667 0.00 0.00 38.47 3.09
7322 8757 0.250381 TTCCACGCGGTACAACCAAT 60.250 50.000 12.47 0.00 38.47 3.16
7385 8820 7.733402 AAGCACAACTTCATTGCATAAAATT 57.267 28.000 0.00 0.00 42.62 1.82
7404 8839 5.645497 ACTGAGGAACATATGAAGAAAGCAC 59.355 40.000 10.38 0.00 0.00 4.40
7433 8868 8.202137 CCTGGAGCATGATTCTCAATAATTTTT 58.798 33.333 0.00 0.00 32.38 1.94
7434 8869 7.562454 TCCTGGAGCATGATTCTCAATAATTTT 59.438 33.333 0.00 0.00 32.38 1.82
7459 8894 6.749923 AATAGTTCTTTGCTGTGGAGAATC 57.250 37.500 0.00 0.00 32.59 2.52
7472 8962 6.757010 CACAGTATCAGCGGTAATAGTTCTTT 59.243 38.462 0.00 0.00 0.00 2.52
7499 8989 0.533755 CCCAATGAGATCTGCCGACC 60.534 60.000 0.00 0.00 0.00 4.79
7502 8992 0.178767 TGACCCAATGAGATCTGCCG 59.821 55.000 0.00 0.00 0.00 5.69
7506 8996 1.866015 TCCGTGACCCAATGAGATCT 58.134 50.000 0.00 0.00 0.00 2.75
7523 9013 8.517878 CCATGGATGATAGTGATTATGTTTTCC 58.482 37.037 5.56 0.00 0.00 3.13
7524 9014 8.025445 GCCATGGATGATAGTGATTATGTTTTC 58.975 37.037 18.40 0.00 0.00 2.29
7572 9062 5.282055 TCTCAATCATGTGAGGTATGGAC 57.718 43.478 12.10 0.00 44.40 4.02
7584 9074 2.014857 CTGCACACCCTCTCAATCATG 58.985 52.381 0.00 0.00 0.00 3.07
7592 9082 2.143876 AAAAACACTGCACACCCTCT 57.856 45.000 0.00 0.00 0.00 3.69
7612 9102 7.230712 GGTACTGAAAAGGGATTTTGAGAAGAA 59.769 37.037 6.88 0.00 31.17 2.52
7613 9103 6.715264 GGTACTGAAAAGGGATTTTGAGAAGA 59.285 38.462 6.88 0.00 31.17 2.87
7614 9104 6.717084 AGGTACTGAAAAGGGATTTTGAGAAG 59.283 38.462 6.88 0.00 37.18 2.85
7615 9105 6.610830 AGGTACTGAAAAGGGATTTTGAGAA 58.389 36.000 6.88 0.00 37.18 2.87
7619 9109 6.152831 CCCTAAGGTACTGAAAAGGGATTTTG 59.847 42.308 11.53 0.00 43.54 2.44
7660 9150 1.198713 AGTCTGGGCACATGTCTAGG 58.801 55.000 0.00 0.00 0.00 3.02
7678 9168 3.561503 GTTTGGTAGCTTGGCGTTTTAG 58.438 45.455 0.00 0.00 0.00 1.85
7684 9174 0.889186 ACTGGTTTGGTAGCTTGGCG 60.889 55.000 0.00 0.00 0.00 5.69
7685 9175 1.328279 AACTGGTTTGGTAGCTTGGC 58.672 50.000 0.00 0.00 0.00 4.52
7692 9182 5.580998 TGCCCATAATAAACTGGTTTGGTA 58.419 37.500 8.73 2.17 34.23 3.25
7723 9213 7.624549 AGCACTAAGACTAATTGGAGAAATCA 58.375 34.615 0.00 0.00 0.00 2.57
7747 9237 2.955660 TGTTGAGTTTAGGTGCCCAAAG 59.044 45.455 0.00 0.00 0.00 2.77
7777 9267 9.990360 TTTACTATCTGTCACTTGTTCATGTTA 57.010 29.630 0.00 0.00 0.00 2.41
7795 9285 8.201554 TGTGAAAGATGATGCAGTTTACTATC 57.798 34.615 0.00 0.00 0.00 2.08
7820 9310 5.976458 TCAAAGTGCTGAAGGTTTTGAAAT 58.024 33.333 0.00 0.00 35.51 2.17
7828 9318 4.523943 TGCATTATTCAAAGTGCTGAAGGT 59.476 37.500 0.00 0.00 38.66 3.50
7829 9319 4.860907 GTGCATTATTCAAAGTGCTGAAGG 59.139 41.667 0.00 0.00 38.66 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.