Multiple sequence alignment - TraesCS7A01G357000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G357000 chr7A 100.000 3731 0 0 1 3731 523148977 523145247 0.000000e+00 6890.0
1 TraesCS7A01G357000 chr7A 97.880 283 6 0 1 283 378008953 378008671 1.200000e-134 490.0
2 TraesCS7A01G357000 chr7A 97.509 281 7 0 1 281 247239505 247239785 7.250000e-132 481.0
3 TraesCS7A01G357000 chr7A 94.500 200 9 2 3533 3731 554025756 554025954 1.300000e-79 307.0
4 TraesCS7A01G357000 chr7A 94.444 198 11 0 3533 3730 612572942 612573139 4.680000e-79 305.0
5 TraesCS7A01G357000 chr7D 94.135 2728 134 17 815 3520 472539597 472542320 0.000000e+00 4128.0
6 TraesCS7A01G357000 chr7D 79.389 131 16 10 286 414 597285038 597284917 8.590000e-12 82.4
7 TraesCS7A01G357000 chr7B 92.485 2688 140 37 281 2944 496656317 496658966 0.000000e+00 3788.0
8 TraesCS7A01G357000 chr7B 87.629 582 61 7 2956 3532 496659135 496659710 0.000000e+00 665.0
9 TraesCS7A01G357000 chr6A 98.221 281 5 0 1 281 425195381 425195101 3.350000e-135 492.0
10 TraesCS7A01G357000 chr5A 98.221 281 5 0 1 281 553348408 553348688 3.350000e-135 492.0
11 TraesCS7A01G357000 chr5A 97.222 288 7 1 1 288 27468170 27467884 1.560000e-133 486.0
12 TraesCS7A01G357000 chr5A 97.857 280 6 0 1 280 136385431 136385710 5.600000e-133 484.0
13 TraesCS7A01G357000 chr5A 93.689 206 12 1 3526 3730 550792004 550791799 1.300000e-79 307.0
14 TraesCS7A01G357000 chr5A 94.444 198 11 0 3533 3730 601907454 601907257 4.680000e-79 305.0
15 TraesCS7A01G357000 chr5A 94.030 201 11 1 3529 3729 458623251 458623450 1.680000e-78 303.0
16 TraesCS7A01G357000 chr2A 98.221 281 5 0 1 281 677348635 677348355 3.350000e-135 492.0
17 TraesCS7A01G357000 chr1A 97.535 284 7 0 1 284 57409466 57409183 1.560000e-133 486.0
18 TraesCS7A01G357000 chr1A 97.865 281 6 0 1 281 122063737 122064017 1.560000e-133 486.0
19 TraesCS7A01G357000 chr1A 92.788 208 14 1 3524 3730 60368038 60367831 2.180000e-77 300.0
20 TraesCS7A01G357000 chr4A 94.089 203 10 2 3529 3730 680525872 680526073 1.300000e-79 307.0
21 TraesCS7A01G357000 chr4A 92.857 210 15 0 3521 3730 471841921 471842130 4.680000e-79 305.0
22 TraesCS7A01G357000 chr4A 92.417 211 15 1 3520 3730 130492067 130492276 2.180000e-77 300.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G357000 chr7A 523145247 523148977 3730 True 6890.0 6890 100.000 1 3731 1 chr7A.!!$R2 3730
1 TraesCS7A01G357000 chr7D 472539597 472542320 2723 False 4128.0 4128 94.135 815 3520 1 chr7D.!!$F1 2705
2 TraesCS7A01G357000 chr7B 496656317 496659710 3393 False 2226.5 3788 90.057 281 3532 2 chr7B.!!$F1 3251

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 473 0.687354 GGAAGTGAGGAAGCAGACCA 59.313 55.000 0.00 0.00 0.00 4.02 F
1077 1094 0.179108 GCCTCCACCACGTCTATGTC 60.179 60.000 0.00 0.00 0.00 3.06 F
1660 1677 1.001020 TACCTCCGGTCGCAAGGTA 60.001 57.895 13.59 13.59 43.18 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 1790 0.384353 GCACGAAGTTTGAAGCCGAC 60.384 55.0 0.00 0.0 41.61 4.79 R
1927 1944 0.759812 TCGTACCACCACCACTCCAA 60.760 55.0 0.00 0.0 0.00 3.53 R
3090 3277 1.248486 GGACAGGGCCAAAGAAGAAC 58.752 55.0 6.18 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.254546 TGCTATGCTAACCGAATGGG 57.745 50.000 0.00 0.00 40.75 4.00
31 32 2.710377 CCGAATGGGTCAAGTCAATCA 58.290 47.619 0.00 0.00 0.00 2.57
32 33 2.420022 CCGAATGGGTCAAGTCAATCAC 59.580 50.000 0.00 0.00 0.00 3.06
33 34 3.073678 CGAATGGGTCAAGTCAATCACA 58.926 45.455 0.00 0.00 0.00 3.58
34 35 3.691118 CGAATGGGTCAAGTCAATCACAT 59.309 43.478 0.00 0.00 0.00 3.21
35 36 4.201851 CGAATGGGTCAAGTCAATCACATC 60.202 45.833 0.00 0.00 0.00 3.06
36 37 3.786368 TGGGTCAAGTCAATCACATCA 57.214 42.857 0.00 0.00 0.00 3.07
37 38 4.305539 TGGGTCAAGTCAATCACATCAT 57.694 40.909 0.00 0.00 0.00 2.45
38 39 4.665451 TGGGTCAAGTCAATCACATCATT 58.335 39.130 0.00 0.00 0.00 2.57
39 40 4.701651 TGGGTCAAGTCAATCACATCATTC 59.298 41.667 0.00 0.00 0.00 2.67
40 41 4.946157 GGGTCAAGTCAATCACATCATTCT 59.054 41.667 0.00 0.00 0.00 2.40
41 42 5.065731 GGGTCAAGTCAATCACATCATTCTC 59.934 44.000 0.00 0.00 0.00 2.87
42 43 5.065731 GGTCAAGTCAATCACATCATTCTCC 59.934 44.000 0.00 0.00 0.00 3.71
43 44 5.879223 GTCAAGTCAATCACATCATTCTCCT 59.121 40.000 0.00 0.00 0.00 3.69
44 45 7.044181 GTCAAGTCAATCACATCATTCTCCTA 58.956 38.462 0.00 0.00 0.00 2.94
45 46 7.550551 GTCAAGTCAATCACATCATTCTCCTAA 59.449 37.037 0.00 0.00 0.00 2.69
46 47 8.270030 TCAAGTCAATCACATCATTCTCCTAAT 58.730 33.333 0.00 0.00 0.00 1.73
47 48 8.343366 CAAGTCAATCACATCATTCTCCTAATG 58.657 37.037 0.00 0.00 0.00 1.90
48 49 7.799081 AGTCAATCACATCATTCTCCTAATGA 58.201 34.615 3.13 3.13 40.50 2.57
49 50 8.438373 AGTCAATCACATCATTCTCCTAATGAT 58.562 33.333 7.28 7.28 45.40 2.45
57 58 6.119240 TCATTCTCCTAATGATGTGATCCC 57.881 41.667 0.00 0.00 32.21 3.85
58 59 4.607293 TTCTCCTAATGATGTGATCCCG 57.393 45.455 0.00 0.00 0.00 5.14
59 60 3.576861 TCTCCTAATGATGTGATCCCGT 58.423 45.455 0.00 0.00 0.00 5.28
60 61 3.967326 TCTCCTAATGATGTGATCCCGTT 59.033 43.478 0.00 0.00 0.00 4.44
61 62 5.144832 TCTCCTAATGATGTGATCCCGTTA 58.855 41.667 0.00 0.00 0.00 3.18
62 63 5.600898 TCTCCTAATGATGTGATCCCGTTAA 59.399 40.000 0.00 0.00 0.00 2.01
63 64 6.270000 TCTCCTAATGATGTGATCCCGTTAAT 59.730 38.462 0.00 0.00 0.00 1.40
64 65 6.464222 TCCTAATGATGTGATCCCGTTAATC 58.536 40.000 0.00 0.00 0.00 1.75
65 66 6.042666 TCCTAATGATGTGATCCCGTTAATCA 59.957 38.462 0.00 0.00 0.00 2.57
66 67 6.710295 CCTAATGATGTGATCCCGTTAATCAA 59.290 38.462 0.00 0.00 35.04 2.57
67 68 7.228507 CCTAATGATGTGATCCCGTTAATCAAA 59.771 37.037 0.00 0.00 35.04 2.69
68 69 7.587037 AATGATGTGATCCCGTTAATCAAAT 57.413 32.000 0.00 0.00 34.46 2.32
69 70 6.375945 TGATGTGATCCCGTTAATCAAATG 57.624 37.500 0.00 0.00 32.39 2.32
70 71 6.118852 TGATGTGATCCCGTTAATCAAATGA 58.881 36.000 0.00 0.00 32.39 2.57
71 72 5.811399 TGTGATCCCGTTAATCAAATGAC 57.189 39.130 0.00 0.00 35.04 3.06
72 73 5.249420 TGTGATCCCGTTAATCAAATGACA 58.751 37.500 0.00 0.00 35.04 3.58
73 74 5.707764 TGTGATCCCGTTAATCAAATGACAA 59.292 36.000 0.00 0.00 35.04 3.18
74 75 6.027749 GTGATCCCGTTAATCAAATGACAAC 58.972 40.000 0.00 0.00 35.04 3.32
75 76 5.943416 TGATCCCGTTAATCAAATGACAACT 59.057 36.000 0.00 0.00 30.37 3.16
76 77 5.873179 TCCCGTTAATCAAATGACAACTC 57.127 39.130 7.65 0.00 0.00 3.01
77 78 5.309638 TCCCGTTAATCAAATGACAACTCA 58.690 37.500 7.65 0.00 0.00 3.41
78 79 5.943416 TCCCGTTAATCAAATGACAACTCAT 59.057 36.000 7.65 0.00 38.94 2.90
79 80 6.029607 CCCGTTAATCAAATGACAACTCATG 58.970 40.000 7.65 0.00 37.20 3.07
93 94 6.620877 ACAACTCATGTCTATGGTTAGGAA 57.379 37.500 0.00 0.00 37.96 3.36
94 95 7.016153 ACAACTCATGTCTATGGTTAGGAAA 57.984 36.000 0.00 0.00 37.96 3.13
95 96 6.879458 ACAACTCATGTCTATGGTTAGGAAAC 59.121 38.462 0.00 0.00 37.96 2.78
96 97 6.620877 ACTCATGTCTATGGTTAGGAAACA 57.379 37.500 0.00 0.00 37.34 2.83
97 98 7.200434 ACTCATGTCTATGGTTAGGAAACAT 57.800 36.000 0.00 0.00 37.34 2.71
98 99 8.319057 ACTCATGTCTATGGTTAGGAAACATA 57.681 34.615 0.00 0.00 37.34 2.29
99 100 8.768397 ACTCATGTCTATGGTTAGGAAACATAA 58.232 33.333 0.00 0.00 37.34 1.90
100 101 8.958119 TCATGTCTATGGTTAGGAAACATAAC 57.042 34.615 0.00 0.00 37.34 1.89
112 113 8.956426 GTTAGGAAACATAACCATCTTTGATCA 58.044 33.333 0.00 0.00 35.56 2.92
113 114 9.527157 TTAGGAAACATAACCATCTTTGATCAA 57.473 29.630 3.38 3.38 0.00 2.57
114 115 7.830739 AGGAAACATAACCATCTTTGATCAAC 58.169 34.615 7.89 0.00 0.00 3.18
115 116 6.747280 GGAAACATAACCATCTTTGATCAACG 59.253 38.462 7.89 6.62 0.00 4.10
116 117 7.361713 GGAAACATAACCATCTTTGATCAACGA 60.362 37.037 16.08 16.08 0.00 3.85
117 118 6.668541 ACATAACCATCTTTGATCAACGAG 57.331 37.500 18.24 10.23 0.00 4.18
118 119 5.065218 ACATAACCATCTTTGATCAACGAGC 59.935 40.000 18.24 0.00 0.00 5.03
119 120 3.340814 ACCATCTTTGATCAACGAGCT 57.659 42.857 18.24 2.03 0.00 4.09
120 121 4.471904 ACCATCTTTGATCAACGAGCTA 57.528 40.909 18.24 0.00 0.00 3.32
121 122 4.437239 ACCATCTTTGATCAACGAGCTAG 58.563 43.478 18.24 8.24 0.00 3.42
122 123 4.081420 ACCATCTTTGATCAACGAGCTAGT 60.081 41.667 18.24 10.56 0.00 2.57
123 124 4.505922 CCATCTTTGATCAACGAGCTAGTC 59.494 45.833 18.24 0.00 0.00 2.59
124 125 4.783764 TCTTTGATCAACGAGCTAGTCA 57.216 40.909 7.89 0.00 0.00 3.41
125 126 5.134202 TCTTTGATCAACGAGCTAGTCAA 57.866 39.130 7.89 0.00 0.00 3.18
126 127 5.164233 TCTTTGATCAACGAGCTAGTCAAG 58.836 41.667 7.89 0.00 0.00 3.02
127 128 4.521130 TTGATCAACGAGCTAGTCAAGT 57.479 40.909 3.38 0.00 0.00 3.16
128 129 5.638596 TTGATCAACGAGCTAGTCAAGTA 57.361 39.130 3.38 0.00 0.00 2.24
129 130 5.836821 TGATCAACGAGCTAGTCAAGTAT 57.163 39.130 0.00 0.00 0.00 2.12
130 131 6.937436 TGATCAACGAGCTAGTCAAGTATA 57.063 37.500 0.00 0.00 0.00 1.47
131 132 6.960468 TGATCAACGAGCTAGTCAAGTATAG 58.040 40.000 0.00 0.00 0.00 1.31
132 133 5.752892 TCAACGAGCTAGTCAAGTATAGG 57.247 43.478 0.00 0.00 0.00 2.57
133 134 4.036498 TCAACGAGCTAGTCAAGTATAGGC 59.964 45.833 0.00 0.00 0.00 3.93
134 135 3.552875 ACGAGCTAGTCAAGTATAGGCA 58.447 45.455 0.00 0.00 0.00 4.75
135 136 4.145807 ACGAGCTAGTCAAGTATAGGCAT 58.854 43.478 0.00 0.00 0.00 4.40
136 137 5.314529 ACGAGCTAGTCAAGTATAGGCATA 58.685 41.667 0.00 0.00 0.00 3.14
137 138 5.181622 ACGAGCTAGTCAAGTATAGGCATAC 59.818 44.000 0.00 0.00 37.83 2.39
139 140 6.594547 CGAGCTAGTCAAGTATAGGCATACTA 59.405 42.308 9.12 0.00 45.41 1.82
140 141 7.201574 CGAGCTAGTCAAGTATAGGCATACTAG 60.202 44.444 9.12 0.00 45.41 2.57
141 142 7.463431 AGCTAGTCAAGTATAGGCATACTAGT 58.537 38.462 0.00 0.00 45.41 2.57
142 143 7.392113 AGCTAGTCAAGTATAGGCATACTAGTG 59.608 40.741 5.39 6.36 45.41 2.74
143 144 7.390996 GCTAGTCAAGTATAGGCATACTAGTGA 59.609 40.741 5.39 7.99 45.41 3.41
144 145 7.513371 AGTCAAGTATAGGCATACTAGTGAC 57.487 40.000 20.18 20.18 45.41 3.67
145 146 7.061054 AGTCAAGTATAGGCATACTAGTGACA 58.939 38.462 24.37 0.00 46.47 3.58
146 147 7.013464 AGTCAAGTATAGGCATACTAGTGACAC 59.987 40.741 24.37 0.00 46.47 3.67
147 148 7.013464 GTCAAGTATAGGCATACTAGTGACACT 59.987 40.741 21.39 13.68 45.41 3.55
148 149 7.228906 TCAAGTATAGGCATACTAGTGACACTC 59.771 40.741 12.39 0.00 45.41 3.51
149 150 6.843752 AGTATAGGCATACTAGTGACACTCT 58.156 40.000 12.39 3.67 44.53 3.24
150 151 6.712998 AGTATAGGCATACTAGTGACACTCTG 59.287 42.308 12.39 9.04 44.53 3.35
151 152 3.702792 AGGCATACTAGTGACACTCTGT 58.297 45.455 12.39 14.35 0.00 3.41
152 153 4.090090 AGGCATACTAGTGACACTCTGTT 58.910 43.478 12.39 0.00 0.00 3.16
153 154 4.528596 AGGCATACTAGTGACACTCTGTTT 59.471 41.667 12.39 5.23 0.00 2.83
154 155 4.627467 GGCATACTAGTGACACTCTGTTTG 59.373 45.833 12.39 16.63 0.00 2.93
155 156 5.230942 GCATACTAGTGACACTCTGTTTGT 58.769 41.667 12.39 5.61 0.00 2.83
156 157 5.346281 GCATACTAGTGACACTCTGTTTGTC 59.654 44.000 12.39 9.81 43.22 3.18
157 158 6.682746 CATACTAGTGACACTCTGTTTGTCT 58.317 40.000 12.39 0.00 43.30 3.41
158 159 7.575155 GCATACTAGTGACACTCTGTTTGTCTA 60.575 40.741 12.39 0.00 43.30 2.59
159 160 6.902771 ACTAGTGACACTCTGTTTGTCTAT 57.097 37.500 12.39 0.00 43.30 1.98
160 161 6.682746 ACTAGTGACACTCTGTTTGTCTATG 58.317 40.000 12.39 0.00 43.30 2.23
161 162 5.537300 AGTGACACTCTGTTTGTCTATGT 57.463 39.130 1.07 0.00 43.30 2.29
162 163 6.650427 AGTGACACTCTGTTTGTCTATGTA 57.350 37.500 1.07 0.00 43.30 2.29
163 164 7.233389 AGTGACACTCTGTTTGTCTATGTAT 57.767 36.000 1.07 0.00 43.30 2.29
164 165 7.671302 AGTGACACTCTGTTTGTCTATGTATT 58.329 34.615 1.07 0.00 43.30 1.89
165 166 7.815068 AGTGACACTCTGTTTGTCTATGTATTC 59.185 37.037 1.07 0.00 43.30 1.75
166 167 7.598869 GTGACACTCTGTTTGTCTATGTATTCA 59.401 37.037 0.00 0.00 43.30 2.57
167 168 7.598869 TGACACTCTGTTTGTCTATGTATTCAC 59.401 37.037 11.01 0.00 43.30 3.18
168 169 7.441836 ACACTCTGTTTGTCTATGTATTCACA 58.558 34.615 0.00 0.00 39.52 3.58
169 170 7.385205 ACACTCTGTTTGTCTATGTATTCACAC 59.615 37.037 0.00 0.00 37.54 3.82
170 171 7.384932 CACTCTGTTTGTCTATGTATTCACACA 59.615 37.037 0.00 0.00 37.54 3.72
171 172 8.097038 ACTCTGTTTGTCTATGTATTCACACAT 58.903 33.333 0.00 0.00 41.88 3.21
172 173 8.255394 TCTGTTTGTCTATGTATTCACACATG 57.745 34.615 0.00 0.00 39.46 3.21
173 174 7.877612 TCTGTTTGTCTATGTATTCACACATGT 59.122 33.333 0.00 0.00 39.46 3.21
174 175 7.805700 TGTTTGTCTATGTATTCACACATGTG 58.194 34.615 24.25 24.25 46.91 3.21
175 176 7.443879 TGTTTGTCTATGTATTCACACATGTGT 59.556 33.333 25.76 25.76 45.76 3.72
176 177 7.977789 TTGTCTATGTATTCACACATGTGTT 57.022 32.000 28.64 17.07 45.76 3.32
177 178 9.495572 TTTGTCTATGTATTCACACATGTGTTA 57.504 29.630 28.64 18.79 45.76 2.41
178 179 9.665719 TTGTCTATGTATTCACACATGTGTTAT 57.334 29.630 28.64 24.01 45.76 1.89
179 180 9.097257 TGTCTATGTATTCACACATGTGTTATG 57.903 33.333 28.64 17.65 45.76 1.90
180 181 9.098355 GTCTATGTATTCACACATGTGTTATGT 57.902 33.333 28.64 16.48 45.76 2.29
181 182 9.665719 TCTATGTATTCACACATGTGTTATGTT 57.334 29.630 28.64 13.91 45.76 2.71
184 185 7.589395 TGTATTCACACATGTGTTATGTTTCC 58.411 34.615 28.64 12.05 45.76 3.13
185 186 4.740741 TCACACATGTGTTATGTTTCCG 57.259 40.909 28.64 14.01 45.76 4.30
186 187 3.500299 TCACACATGTGTTATGTTTCCGG 59.500 43.478 28.64 13.30 45.76 5.14
187 188 3.252215 CACACATGTGTTATGTTTCCGGT 59.748 43.478 28.64 0.00 42.83 5.28
188 189 3.886505 ACACATGTGTTATGTTTCCGGTT 59.113 39.130 25.76 0.00 41.83 4.44
189 190 5.049336 CACACATGTGTTATGTTTCCGGTTA 60.049 40.000 28.64 0.00 42.83 2.85
190 191 5.531659 ACACATGTGTTATGTTTCCGGTTAA 59.468 36.000 25.76 0.00 41.83 2.01
191 192 6.207810 ACACATGTGTTATGTTTCCGGTTAAT 59.792 34.615 25.76 0.00 41.83 1.40
192 193 7.390996 ACACATGTGTTATGTTTCCGGTTAATA 59.609 33.333 25.76 0.00 41.83 0.98
193 194 7.694784 CACATGTGTTATGTTTCCGGTTAATAC 59.305 37.037 18.03 3.13 0.00 1.89
194 195 7.390996 ACATGTGTTATGTTTCCGGTTAATACA 59.609 33.333 0.00 8.28 32.63 2.29
195 196 7.741027 TGTGTTATGTTTCCGGTTAATACAA 57.259 32.000 0.00 0.00 0.00 2.41
196 197 8.338072 TGTGTTATGTTTCCGGTTAATACAAT 57.662 30.769 0.00 0.00 0.00 2.71
197 198 8.794553 TGTGTTATGTTTCCGGTTAATACAATT 58.205 29.630 0.00 0.00 0.00 2.32
198 199 9.281075 GTGTTATGTTTCCGGTTAATACAATTC 57.719 33.333 0.00 0.00 0.00 2.17
199 200 9.233649 TGTTATGTTTCCGGTTAATACAATTCT 57.766 29.630 0.00 0.00 0.00 2.40
202 203 7.311364 TGTTTCCGGTTAATACAATTCTAGC 57.689 36.000 0.00 0.00 0.00 3.42
203 204 6.879993 TGTTTCCGGTTAATACAATTCTAGCA 59.120 34.615 0.00 0.00 0.00 3.49
204 205 7.554835 TGTTTCCGGTTAATACAATTCTAGCAT 59.445 33.333 0.00 0.00 0.00 3.79
205 206 7.490962 TTCCGGTTAATACAATTCTAGCATG 57.509 36.000 0.00 0.00 0.00 4.06
206 207 6.822442 TCCGGTTAATACAATTCTAGCATGA 58.178 36.000 0.00 0.00 0.00 3.07
207 208 7.276658 TCCGGTTAATACAATTCTAGCATGAA 58.723 34.615 0.00 0.00 0.00 2.57
208 209 7.936847 TCCGGTTAATACAATTCTAGCATGAAT 59.063 33.333 0.00 0.00 38.19 2.57
209 210 9.214957 CCGGTTAATACAATTCTAGCATGAATA 57.785 33.333 0.00 0.00 35.82 1.75
284 285 1.425448 GGGCATATTACCTTCAGGGCT 59.575 52.381 0.00 0.00 40.27 5.19
295 296 1.419387 CTTCAGGGCTTAGAGGGATGG 59.581 57.143 0.00 0.00 0.00 3.51
296 297 1.056700 TCAGGGCTTAGAGGGATGGC 61.057 60.000 0.00 0.00 0.00 4.40
297 298 1.059006 CAGGGCTTAGAGGGATGGCT 61.059 60.000 0.00 0.00 0.00 4.75
299 300 1.056700 GGGCTTAGAGGGATGGCTGA 61.057 60.000 0.00 0.00 0.00 4.26
316 317 4.555709 AGTGGCGGCCAACAACGA 62.556 61.111 25.70 0.00 34.18 3.85
317 318 4.322385 GTGGCGGCCAACAACGAC 62.322 66.667 25.70 5.42 38.94 4.34
322 323 2.589442 GGCCAACAACGACGGTGA 60.589 61.111 21.82 0.00 0.00 4.02
323 324 2.604174 GGCCAACAACGACGGTGAG 61.604 63.158 21.82 11.37 0.00 3.51
331 332 1.813728 AACGACGGTGAGGGGAGTTC 61.814 60.000 0.00 0.00 0.00 3.01
339 345 1.075151 GAGGGGAGTTCGAGGGGAT 60.075 63.158 0.00 0.00 0.00 3.85
341 347 1.382695 GGGGAGTTCGAGGGGATGA 60.383 63.158 0.00 0.00 0.00 2.92
344 350 1.321074 GGAGTTCGAGGGGATGACGT 61.321 60.000 0.00 0.00 0.00 4.34
411 417 2.125106 GGTGGAGGCGGCAGTTAG 60.125 66.667 13.08 0.00 0.00 2.34
421 427 2.504519 GCAGTTAGGGCGGGGTAG 59.495 66.667 0.00 0.00 0.00 3.18
434 440 2.040606 GGTAGGCTGGGGGAGTCA 59.959 66.667 0.00 0.00 0.00 3.41
441 447 1.694133 GCTGGGGGAGTCATGAGGAG 61.694 65.000 0.00 0.00 0.00 3.69
447 453 2.472029 GGGAGTCATGAGGAGGAAGAA 58.528 52.381 0.00 0.00 0.00 2.52
448 454 2.433970 GGGAGTCATGAGGAGGAAGAAG 59.566 54.545 0.00 0.00 0.00 2.85
449 455 2.433970 GGAGTCATGAGGAGGAAGAAGG 59.566 54.545 0.00 0.00 0.00 3.46
451 457 3.772025 GAGTCATGAGGAGGAAGAAGGAA 59.228 47.826 0.00 0.00 0.00 3.36
452 458 3.774216 AGTCATGAGGAGGAAGAAGGAAG 59.226 47.826 0.00 0.00 0.00 3.46
453 459 3.517500 GTCATGAGGAGGAAGAAGGAAGT 59.482 47.826 0.00 0.00 0.00 3.01
454 460 3.517100 TCATGAGGAGGAAGAAGGAAGTG 59.483 47.826 0.00 0.00 0.00 3.16
455 461 3.260269 TGAGGAGGAAGAAGGAAGTGA 57.740 47.619 0.00 0.00 0.00 3.41
457 463 2.499693 GAGGAGGAAGAAGGAAGTGAGG 59.500 54.545 0.00 0.00 0.00 3.86
458 464 2.112691 AGGAGGAAGAAGGAAGTGAGGA 59.887 50.000 0.00 0.00 0.00 3.71
460 466 3.055458 GGAGGAAGAAGGAAGTGAGGAAG 60.055 52.174 0.00 0.00 0.00 3.46
462 468 2.039084 GGAAGAAGGAAGTGAGGAAGCA 59.961 50.000 0.00 0.00 0.00 3.91
464 470 2.614259 AGAAGGAAGTGAGGAAGCAGA 58.386 47.619 0.00 0.00 0.00 4.26
465 471 2.301583 AGAAGGAAGTGAGGAAGCAGAC 59.698 50.000 0.00 0.00 0.00 3.51
466 472 0.980423 AGGAAGTGAGGAAGCAGACC 59.020 55.000 0.00 0.00 0.00 3.85
467 473 0.687354 GGAAGTGAGGAAGCAGACCA 59.313 55.000 0.00 0.00 0.00 4.02
468 474 1.072331 GGAAGTGAGGAAGCAGACCAA 59.928 52.381 0.00 0.00 0.00 3.67
469 475 2.487265 GGAAGTGAGGAAGCAGACCAAA 60.487 50.000 0.00 0.00 0.00 3.28
470 476 3.214328 GAAGTGAGGAAGCAGACCAAAA 58.786 45.455 0.00 0.00 0.00 2.44
471 477 3.515602 AGTGAGGAAGCAGACCAAAAT 57.484 42.857 0.00 0.00 0.00 1.82
472 478 3.837355 AGTGAGGAAGCAGACCAAAATT 58.163 40.909 0.00 0.00 0.00 1.82
473 479 3.571401 AGTGAGGAAGCAGACCAAAATTG 59.429 43.478 0.00 0.00 0.00 2.32
474 480 3.569701 GTGAGGAAGCAGACCAAAATTGA 59.430 43.478 0.00 0.00 0.00 2.57
475 481 3.569701 TGAGGAAGCAGACCAAAATTGAC 59.430 43.478 0.00 0.00 0.00 3.18
476 482 3.565307 AGGAAGCAGACCAAAATTGACA 58.435 40.909 0.00 0.00 0.00 3.58
477 483 3.960102 AGGAAGCAGACCAAAATTGACAA 59.040 39.130 0.00 0.00 0.00 3.18
478 484 4.051237 GGAAGCAGACCAAAATTGACAAC 58.949 43.478 0.00 0.00 0.00 3.32
479 485 3.733443 AGCAGACCAAAATTGACAACC 57.267 42.857 0.00 0.00 0.00 3.77
480 486 3.299503 AGCAGACCAAAATTGACAACCT 58.700 40.909 0.00 0.00 0.00 3.50
481 487 3.068590 AGCAGACCAAAATTGACAACCTG 59.931 43.478 0.00 0.00 0.00 4.00
482 488 3.181476 GCAGACCAAAATTGACAACCTGT 60.181 43.478 0.00 0.00 0.00 4.00
498 504 6.573617 CAACCTGTTTTGAGTTGTTTGATC 57.426 37.500 0.00 0.00 36.87 2.92
500 506 6.279513 ACCTGTTTTGAGTTGTTTGATCAA 57.720 33.333 3.38 3.38 0.00 2.57
502 508 6.152661 ACCTGTTTTGAGTTGTTTGATCAAGA 59.847 34.615 8.41 0.00 34.64 3.02
504 510 7.380602 CCTGTTTTGAGTTGTTTGATCAAGATC 59.619 37.037 8.41 3.12 34.64 2.75
506 512 5.611796 TTGAGTTGTTTGATCAAGATCCG 57.388 39.130 8.41 0.00 37.02 4.18
507 513 4.893608 TGAGTTGTTTGATCAAGATCCGA 58.106 39.130 8.41 0.00 37.02 4.55
508 514 4.690748 TGAGTTGTTTGATCAAGATCCGAC 59.309 41.667 8.41 3.58 37.02 4.79
509 515 4.641396 AGTTGTTTGATCAAGATCCGACA 58.359 39.130 8.41 6.28 37.02 4.35
510 516 4.452455 AGTTGTTTGATCAAGATCCGACAC 59.548 41.667 8.41 2.12 37.02 3.67
511 517 4.271696 TGTTTGATCAAGATCCGACACT 57.728 40.909 8.41 0.00 37.02 3.55
512 518 4.641396 TGTTTGATCAAGATCCGACACTT 58.359 39.130 8.41 0.00 37.02 3.16
513 519 4.452114 TGTTTGATCAAGATCCGACACTTG 59.548 41.667 8.41 0.00 43.03 3.16
514 520 3.251479 TGATCAAGATCCGACACTTGG 57.749 47.619 7.54 0.00 42.27 3.61
525 531 3.385433 TCCGACACTTGGTGAGAAAAGTA 59.615 43.478 4.62 0.00 34.90 2.24
528 534 4.809426 CGACACTTGGTGAGAAAAGTAACT 59.191 41.667 4.62 0.00 34.90 2.24
529 535 5.050972 CGACACTTGGTGAGAAAAGTAACTC 60.051 44.000 4.62 0.00 34.90 3.01
533 539 6.483307 CACTTGGTGAGAAAAGTAACTCATGA 59.517 38.462 0.00 0.00 43.46 3.07
534 540 7.173907 CACTTGGTGAGAAAAGTAACTCATGAT 59.826 37.037 0.00 0.00 43.46 2.45
535 541 7.173907 ACTTGGTGAGAAAAGTAACTCATGATG 59.826 37.037 0.00 0.00 43.46 3.07
536 542 6.768483 TGGTGAGAAAAGTAACTCATGATGA 58.232 36.000 0.00 0.00 43.46 2.92
548 554 8.283291 AGTAACTCATGATGAAAACGTTTTCTC 58.717 33.333 38.87 32.76 45.14 2.87
556 562 3.556775 TGAAAACGTTTTCTCGTACCTGG 59.443 43.478 38.87 0.00 45.14 4.45
594 602 4.853924 AAAAACGCCTTCACAAGATCAT 57.146 36.364 0.00 0.00 0.00 2.45
596 604 2.029838 ACGCCTTCACAAGATCATCC 57.970 50.000 0.00 0.00 0.00 3.51
598 606 1.303309 GCCTTCACAAGATCATCCGG 58.697 55.000 0.00 0.00 0.00 5.14
599 607 1.407437 GCCTTCACAAGATCATCCGGT 60.407 52.381 0.00 0.00 0.00 5.28
602 610 3.599343 CTTCACAAGATCATCCGGTCAA 58.401 45.455 0.00 0.00 0.00 3.18
603 611 3.912496 TCACAAGATCATCCGGTCAAT 57.088 42.857 0.00 0.00 0.00 2.57
604 612 3.797039 TCACAAGATCATCCGGTCAATC 58.203 45.455 0.00 2.91 0.00 2.67
605 613 2.874701 CACAAGATCATCCGGTCAATCC 59.125 50.000 0.00 0.00 0.00 3.01
619 627 3.246226 GGTCAATCCAATGAACGATCGAG 59.754 47.826 24.34 3.96 35.97 4.04
645 653 1.396996 CCGCCTCAACAAACCTTATCG 59.603 52.381 0.00 0.00 0.00 2.92
650 658 4.636206 GCCTCAACAAACCTTATCGAAGAT 59.364 41.667 0.00 0.00 45.12 2.40
684 696 1.730451 AAGTTTTTGGCGGGACCGTG 61.730 55.000 12.83 0.00 43.94 4.94
704 716 2.271800 GCAACCAGGTACAGATCGAAG 58.728 52.381 0.00 0.00 0.00 3.79
742 755 1.139163 GGCAAGCACAAACCATTTCG 58.861 50.000 0.00 0.00 0.00 3.46
754 767 5.873164 ACAAACCATTTCGTACCATAGAGAC 59.127 40.000 0.00 0.00 0.00 3.36
789 802 8.437360 AAAAAGGAAAATGAAACTTGATCCAC 57.563 30.769 0.00 0.00 0.00 4.02
795 808 4.970662 ATGAAACTTGATCCACATTCGG 57.029 40.909 0.00 0.00 0.00 4.30
798 811 2.698855 ACTTGATCCACATTCGGAGG 57.301 50.000 0.00 0.00 38.83 4.30
809 822 4.562757 CCACATTCGGAGGAGTACTTTCAA 60.563 45.833 0.00 0.00 0.00 2.69
812 825 4.785511 TTCGGAGGAGTACTTTCAAGAG 57.214 45.455 0.00 0.00 0.00 2.85
813 826 3.090037 TCGGAGGAGTACTTTCAAGAGG 58.910 50.000 0.00 0.00 0.00 3.69
815 828 3.258622 CGGAGGAGTACTTTCAAGAGGTT 59.741 47.826 0.00 0.00 0.00 3.50
816 829 4.461781 CGGAGGAGTACTTTCAAGAGGTTA 59.538 45.833 0.00 0.00 0.00 2.85
817 830 5.047519 CGGAGGAGTACTTTCAAGAGGTTAA 60.048 44.000 0.00 0.00 0.00 2.01
819 832 6.239515 GGAGGAGTACTTTCAAGAGGTTAACA 60.240 42.308 8.10 0.00 0.00 2.41
920 933 1.202770 ACCAAGTACACCACCAAGCTC 60.203 52.381 0.00 0.00 0.00 4.09
1077 1094 0.179108 GCCTCCACCACGTCTATGTC 60.179 60.000 0.00 0.00 0.00 3.06
1159 1176 2.113774 CCCAGCTCAAGTGCCACA 59.886 61.111 0.00 0.00 0.00 4.17
1281 1298 3.006756 GCTGCTCTACTCCCGCACA 62.007 63.158 0.00 0.00 0.00 4.57
1383 1400 1.034838 CCGGCTACTCAGTGCTCTCT 61.035 60.000 0.00 0.00 0.00 3.10
1537 1554 4.260170 GCTCAACATGTCAAAGATCCTCT 58.740 43.478 0.00 0.00 0.00 3.69
1632 1649 1.690219 CCTTCTCCCTGATCCACCCG 61.690 65.000 0.00 0.00 0.00 5.28
1660 1677 1.001020 TACCTCCGGTCGCAAGGTA 60.001 57.895 13.59 13.59 43.18 3.08
1809 1826 2.580867 CTACTCGGCGTGCTGCTC 60.581 66.667 6.85 0.00 45.43 4.26
2241 2258 4.899239 GCCGACATCCTCCGCCTG 62.899 72.222 0.00 0.00 0.00 4.85
2247 2264 3.474570 ATCCTCCGCCTGACTGCC 61.475 66.667 0.00 0.00 0.00 4.85
2411 2428 0.038892 GTCGTCCTTGCGTTCTGGTA 60.039 55.000 0.00 0.00 0.00 3.25
2424 2441 3.894547 CTGGTACGGCGTGGGCTTT 62.895 63.158 24.86 0.00 39.81 3.51
2433 2450 1.602323 CGTGGGCTTTGTTGGGCTA 60.602 57.895 0.00 0.00 0.00 3.93
2437 2454 1.517361 GGCTTTGTTGGGCTATGGC 59.483 57.895 0.00 0.00 37.82 4.40
2483 2500 4.529219 CGCCGGGCTCATGCTGTA 62.529 66.667 18.34 0.00 39.59 2.74
2706 2723 1.514443 CTCGAACGAGAAGGCCGAC 60.514 63.158 17.65 0.00 44.53 4.79
2754 2771 2.787249 CGGAAAGCACGATGCCAG 59.213 61.111 6.39 0.00 46.52 4.85
2836 2857 9.420551 GTACTAAGTACTGTGCTAATGTTTTCT 57.579 33.333 0.00 0.00 36.25 2.52
2952 2982 8.514330 AATGCAGTATTTTTATCCGTCCTAAA 57.486 30.769 0.00 0.00 0.00 1.85
2954 2984 9.787435 ATGCAGTATTTTTATCCGTCCTAAATA 57.213 29.630 0.00 0.00 0.00 1.40
3090 3277 2.062971 ATGAACCCATAGCTGGCTTG 57.937 50.000 0.00 0.00 41.64 4.01
3108 3295 1.981256 TGTTCTTCTTTGGCCCTGTC 58.019 50.000 0.00 0.00 0.00 3.51
3114 3301 1.078426 CTTTGGCCCTGTCCGGTAG 60.078 63.158 0.00 0.86 0.00 3.18
3190 3377 5.876357 ACTAGTGGTTGGCTCTAAAATCAA 58.124 37.500 0.00 0.00 0.00 2.57
3196 3383 7.836183 AGTGGTTGGCTCTAAAATCAATCTAAT 59.164 33.333 0.00 0.00 0.00 1.73
3222 3409 4.150980 ACACGTAAAATACACACCACATCG 59.849 41.667 0.00 0.00 0.00 3.84
3233 3421 8.896320 ATACACACCACATCGCTATAAAATTA 57.104 30.769 0.00 0.00 0.00 1.40
3255 3443 4.300189 TGTACAACATGTTTGGTTGAGC 57.700 40.909 8.77 5.03 46.56 4.26
3290 3478 8.912787 TGCGAGCTTATTTAGATAGCTAATAC 57.087 34.615 0.44 0.00 40.90 1.89
3307 3495 8.644374 AGCTAATACCAAAACAAAGTGGATTA 57.356 30.769 0.00 0.00 38.36 1.75
3316 3504 8.143835 CCAAAACAAAGTGGATTAGATTTCACT 58.856 33.333 0.00 0.00 41.59 3.41
3339 3527 7.174253 CACTTGCACCTAGATAACCACTTAAAA 59.826 37.037 0.00 0.00 0.00 1.52
3392 3581 4.464244 TGAAATGGTTTTGGTGAGTGTTCA 59.536 37.500 0.00 0.00 0.00 3.18
3410 3600 3.358707 TCAACTCGCGTCTAAGTTTCA 57.641 42.857 5.77 0.00 33.53 2.69
3473 3668 6.890979 AACAGATGCTCTAGAAAGCTTTTT 57.109 33.333 14.05 10.53 42.94 1.94
3532 3727 4.150627 CAGACGACTGGGCATATAATTTCG 59.849 45.833 7.02 0.00 40.14 3.46
3533 3728 4.038763 AGACGACTGGGCATATAATTTCGA 59.961 41.667 0.00 0.00 0.00 3.71
3534 3729 4.307432 ACGACTGGGCATATAATTTCGAG 58.693 43.478 0.00 0.00 0.00 4.04
3535 3730 4.038763 ACGACTGGGCATATAATTTCGAGA 59.961 41.667 0.00 0.00 0.00 4.04
3536 3731 4.988540 CGACTGGGCATATAATTTCGAGAA 59.011 41.667 0.00 0.00 0.00 2.87
3537 3732 5.465390 CGACTGGGCATATAATTTCGAGAAA 59.535 40.000 0.40 0.40 34.46 2.52
3538 3733 6.018262 CGACTGGGCATATAATTTCGAGAAAA 60.018 38.462 2.17 0.00 33.56 2.29
3539 3734 7.307989 CGACTGGGCATATAATTTCGAGAAAAT 60.308 37.037 2.17 0.00 39.30 1.82
3540 3735 8.237811 ACTGGGCATATAATTTCGAGAAAATT 57.762 30.769 2.17 0.00 46.72 1.82
3541 3736 8.352942 ACTGGGCATATAATTTCGAGAAAATTC 58.647 33.333 2.17 0.00 42.63 2.17
3542 3737 7.657336 TGGGCATATAATTTCGAGAAAATTCC 58.343 34.615 2.17 0.00 42.63 3.01
3543 3738 7.505585 TGGGCATATAATTTCGAGAAAATTCCT 59.494 33.333 2.17 0.00 42.63 3.36
3544 3739 8.360390 GGGCATATAATTTCGAGAAAATTCCTT 58.640 33.333 2.17 0.00 42.63 3.36
3553 3748 9.626045 ATTTCGAGAAAATTCCTTATTTGACAC 57.374 29.630 2.17 0.00 36.57 3.67
3554 3749 7.979444 TCGAGAAAATTCCTTATTTGACACT 57.021 32.000 0.00 0.00 36.57 3.55
3555 3750 9.496873 TTCGAGAAAATTCCTTATTTGACACTA 57.503 29.630 0.00 0.00 36.57 2.74
3556 3751 9.667107 TCGAGAAAATTCCTTATTTGACACTAT 57.333 29.630 0.00 0.00 36.57 2.12
3586 3781 9.883142 AAAATTTGTTTCCTTATTTGACACTGA 57.117 25.926 0.00 0.00 0.00 3.41
3587 3782 9.883142 AAATTTGTTTCCTTATTTGACACTGAA 57.117 25.926 0.00 0.00 0.00 3.02
3588 3783 9.883142 AATTTGTTTCCTTATTTGACACTGAAA 57.117 25.926 0.00 0.00 0.00 2.69
3589 3784 9.883142 ATTTGTTTCCTTATTTGACACTGAAAA 57.117 25.926 0.00 0.00 0.00 2.29
3590 3785 9.712305 TTTGTTTCCTTATTTGACACTGAAAAA 57.288 25.926 0.00 0.00 0.00 1.94
3591 3786 8.925161 TGTTTCCTTATTTGACACTGAAAAAG 57.075 30.769 0.00 0.00 0.00 2.27
3592 3787 8.527810 TGTTTCCTTATTTGACACTGAAAAAGT 58.472 29.630 0.00 0.00 40.93 2.66
3593 3788 9.366216 GTTTCCTTATTTGACACTGAAAAAGTT 57.634 29.630 0.00 0.00 36.83 2.66
3594 3789 9.936759 TTTCCTTATTTGACACTGAAAAAGTTT 57.063 25.926 0.00 0.00 36.83 2.66
3595 3790 9.936759 TTCCTTATTTGACACTGAAAAAGTTTT 57.063 25.926 0.00 0.00 36.83 2.43
3596 3791 9.936759 TCCTTATTTGACACTGAAAAAGTTTTT 57.063 25.926 13.35 13.35 36.83 1.94
3601 3796 7.883229 TTGACACTGAAAAAGTTTTTCTTCC 57.117 32.000 31.06 19.60 36.83 3.46
3602 3797 6.394809 TGACACTGAAAAAGTTTTTCTTCCC 58.605 36.000 31.06 20.10 36.83 3.97
3603 3798 6.210584 TGACACTGAAAAAGTTTTTCTTCCCT 59.789 34.615 31.06 16.08 36.83 4.20
3604 3799 7.394923 TGACACTGAAAAAGTTTTTCTTCCCTA 59.605 33.333 31.06 15.83 36.83 3.53
3605 3800 8.306313 ACACTGAAAAAGTTTTTCTTCCCTAT 57.694 30.769 31.06 14.42 36.83 2.57
3606 3801 8.758829 ACACTGAAAAAGTTTTTCTTCCCTATT 58.241 29.630 31.06 10.36 36.83 1.73
3607 3802 9.599866 CACTGAAAAAGTTTTTCTTCCCTATTT 57.400 29.630 31.06 10.44 36.83 1.40
3608 3803 9.599866 ACTGAAAAAGTTTTTCTTCCCTATTTG 57.400 29.630 31.06 15.59 34.57 2.32
3609 3804 9.816354 CTGAAAAAGTTTTTCTTCCCTATTTGA 57.184 29.630 31.06 13.19 35.02 2.69
3610 3805 9.594478 TGAAAAAGTTTTTCTTCCCTATTTGAC 57.406 29.630 31.06 9.99 35.02 3.18
3611 3806 9.594478 GAAAAAGTTTTTCTTCCCTATTTGACA 57.406 29.630 26.68 0.00 35.02 3.58
3660 3855 7.581011 ATGACATTTTCGTTTATTTTGAGCC 57.419 32.000 0.00 0.00 0.00 4.70
3661 3856 6.744112 TGACATTTTCGTTTATTTTGAGCCT 58.256 32.000 0.00 0.00 0.00 4.58
3662 3857 7.877003 TGACATTTTCGTTTATTTTGAGCCTA 58.123 30.769 0.00 0.00 0.00 3.93
3663 3858 8.353684 TGACATTTTCGTTTATTTTGAGCCTAA 58.646 29.630 0.00 0.00 0.00 2.69
3664 3859 9.187455 GACATTTTCGTTTATTTTGAGCCTAAA 57.813 29.630 0.00 0.00 0.00 1.85
3665 3860 9.705290 ACATTTTCGTTTATTTTGAGCCTAAAT 57.295 25.926 0.00 0.00 0.00 1.40
3666 3861 9.956797 CATTTTCGTTTATTTTGAGCCTAAATG 57.043 29.630 0.00 0.00 0.00 2.32
3667 3862 9.921637 ATTTTCGTTTATTTTGAGCCTAAATGA 57.078 25.926 0.00 0.00 31.74 2.57
3668 3863 8.736751 TTTCGTTTATTTTGAGCCTAAATGAC 57.263 30.769 0.00 0.00 32.78 3.06
3669 3864 7.441890 TCGTTTATTTTGAGCCTAAATGACA 57.558 32.000 0.00 0.00 29.74 3.58
3670 3865 7.302524 TCGTTTATTTTGAGCCTAAATGACAC 58.697 34.615 0.00 0.00 29.74 3.67
3671 3866 7.041030 TCGTTTATTTTGAGCCTAAATGACACA 60.041 33.333 0.00 0.00 29.74 3.72
3672 3867 7.754924 CGTTTATTTTGAGCCTAAATGACACAT 59.245 33.333 0.00 0.00 0.00 3.21
3673 3868 8.863049 GTTTATTTTGAGCCTAAATGACACATG 58.137 33.333 0.00 0.00 0.00 3.21
3674 3869 6.839124 ATTTTGAGCCTAAATGACACATGA 57.161 33.333 0.00 0.00 0.00 3.07
3675 3870 6.647334 TTTTGAGCCTAAATGACACATGAA 57.353 33.333 0.00 0.00 0.00 2.57
3676 3871 6.647334 TTTGAGCCTAAATGACACATGAAA 57.353 33.333 0.00 0.00 0.00 2.69
3677 3872 6.647334 TTGAGCCTAAATGACACATGAAAA 57.353 33.333 0.00 0.00 0.00 2.29
3678 3873 6.258230 TGAGCCTAAATGACACATGAAAAG 57.742 37.500 0.00 0.00 0.00 2.27
3679 3874 6.003326 TGAGCCTAAATGACACATGAAAAGA 58.997 36.000 0.00 0.00 0.00 2.52
3680 3875 6.072508 TGAGCCTAAATGACACATGAAAAGAC 60.073 38.462 0.00 0.00 0.00 3.01
3681 3876 6.006449 AGCCTAAATGACACATGAAAAGACT 58.994 36.000 0.00 0.00 0.00 3.24
3682 3877 6.150140 AGCCTAAATGACACATGAAAAGACTC 59.850 38.462 0.00 0.00 0.00 3.36
3683 3878 6.150140 GCCTAAATGACACATGAAAAGACTCT 59.850 38.462 0.00 0.00 0.00 3.24
3684 3879 7.308830 GCCTAAATGACACATGAAAAGACTCTT 60.309 37.037 0.00 0.00 0.00 2.85
3685 3880 8.233190 CCTAAATGACACATGAAAAGACTCTTC 58.767 37.037 0.00 0.00 0.00 2.87
3686 3881 7.814264 AAATGACACATGAAAAGACTCTTCT 57.186 32.000 0.00 0.00 0.00 2.85
3687 3882 6.798315 ATGACACATGAAAAGACTCTTCTG 57.202 37.500 0.00 0.00 29.98 3.02
3688 3883 4.512944 TGACACATGAAAAGACTCTTCTGC 59.487 41.667 0.00 0.00 29.98 4.26
3689 3884 3.817647 ACACATGAAAAGACTCTTCTGCC 59.182 43.478 0.00 0.00 29.98 4.85
3690 3885 3.190118 CACATGAAAAGACTCTTCTGCCC 59.810 47.826 0.00 0.00 29.98 5.36
3691 3886 2.568623 TGAAAAGACTCTTCTGCCCC 57.431 50.000 0.00 0.00 29.98 5.80
3692 3887 2.057922 TGAAAAGACTCTTCTGCCCCT 58.942 47.619 0.00 0.00 29.98 4.79
3693 3888 2.039084 TGAAAAGACTCTTCTGCCCCTC 59.961 50.000 0.00 0.00 29.98 4.30
3694 3889 1.734655 AAAGACTCTTCTGCCCCTCA 58.265 50.000 0.00 0.00 29.98 3.86
3695 3890 1.963985 AAGACTCTTCTGCCCCTCAT 58.036 50.000 0.00 0.00 29.98 2.90
3696 3891 1.202330 AGACTCTTCTGCCCCTCATG 58.798 55.000 0.00 0.00 0.00 3.07
3697 3892 0.908198 GACTCTTCTGCCCCTCATGT 59.092 55.000 0.00 0.00 0.00 3.21
3698 3893 0.617413 ACTCTTCTGCCCCTCATGTG 59.383 55.000 0.00 0.00 0.00 3.21
3699 3894 0.107312 CTCTTCTGCCCCTCATGTGG 60.107 60.000 6.84 6.84 0.00 4.17
3700 3895 0.842030 TCTTCTGCCCCTCATGTGGT 60.842 55.000 12.65 0.00 0.00 4.16
3701 3896 0.911769 CTTCTGCCCCTCATGTGGTA 59.088 55.000 12.65 1.78 0.00 3.25
3702 3897 1.492176 CTTCTGCCCCTCATGTGGTAT 59.508 52.381 12.65 0.00 0.00 2.73
3703 3898 0.839277 TCTGCCCCTCATGTGGTATG 59.161 55.000 12.65 2.55 0.00 2.39
3704 3899 0.548031 CTGCCCCTCATGTGGTATGT 59.452 55.000 12.65 0.00 0.00 2.29
3705 3900 0.255604 TGCCCCTCATGTGGTATGTG 59.744 55.000 12.65 0.00 0.00 3.21
3706 3901 0.255890 GCCCCTCATGTGGTATGTGT 59.744 55.000 12.65 0.00 0.00 3.72
3707 3902 2.018644 GCCCCTCATGTGGTATGTGTG 61.019 57.143 12.65 0.00 0.00 3.82
3708 3903 1.281867 CCCCTCATGTGGTATGTGTGT 59.718 52.381 12.65 0.00 0.00 3.72
3709 3904 2.358957 CCCTCATGTGGTATGTGTGTG 58.641 52.381 12.65 0.00 0.00 3.82
3710 3905 2.358957 CCTCATGTGGTATGTGTGTGG 58.641 52.381 5.61 0.00 0.00 4.17
3711 3906 2.358957 CTCATGTGGTATGTGTGTGGG 58.641 52.381 0.00 0.00 0.00 4.61
3712 3907 1.004161 TCATGTGGTATGTGTGTGGGG 59.996 52.381 0.00 0.00 0.00 4.96
3713 3908 0.331278 ATGTGGTATGTGTGTGGGGG 59.669 55.000 0.00 0.00 0.00 5.40
3730 3925 3.262936 GGCAATAGCGCACACACA 58.737 55.556 11.47 0.00 43.41 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.256117 ACCCATTCGGTTAGCATAGC 57.744 50.000 0.00 0.00 45.36 2.97
11 12 2.420022 GTGATTGACTTGACCCATTCGG 59.580 50.000 0.00 0.00 37.81 4.30
12 13 3.073678 TGTGATTGACTTGACCCATTCG 58.926 45.455 0.00 0.00 0.00 3.34
13 14 4.701651 TGATGTGATTGACTTGACCCATTC 59.298 41.667 0.00 0.00 0.00 2.67
14 15 4.665451 TGATGTGATTGACTTGACCCATT 58.335 39.130 0.00 0.00 0.00 3.16
15 16 4.305539 TGATGTGATTGACTTGACCCAT 57.694 40.909 0.00 0.00 0.00 4.00
16 17 3.786368 TGATGTGATTGACTTGACCCA 57.214 42.857 0.00 0.00 0.00 4.51
17 18 4.946157 AGAATGATGTGATTGACTTGACCC 59.054 41.667 0.00 0.00 0.00 4.46
18 19 5.065731 GGAGAATGATGTGATTGACTTGACC 59.934 44.000 0.00 0.00 0.00 4.02
19 20 5.879223 AGGAGAATGATGTGATTGACTTGAC 59.121 40.000 0.00 0.00 0.00 3.18
20 21 6.058553 AGGAGAATGATGTGATTGACTTGA 57.941 37.500 0.00 0.00 0.00 3.02
21 22 7.854557 TTAGGAGAATGATGTGATTGACTTG 57.145 36.000 0.00 0.00 0.00 3.16
22 23 8.270030 TCATTAGGAGAATGATGTGATTGACTT 58.730 33.333 0.00 0.00 32.21 3.01
23 24 7.799081 TCATTAGGAGAATGATGTGATTGACT 58.201 34.615 0.00 0.00 32.21 3.41
24 25 8.618702 ATCATTAGGAGAATGATGTGATTGAC 57.381 34.615 11.08 0.00 43.52 3.18
33 34 6.575847 CGGGATCACATCATTAGGAGAATGAT 60.576 42.308 6.90 6.90 45.40 2.45
34 35 5.279657 CGGGATCACATCATTAGGAGAATGA 60.280 44.000 0.00 2.66 40.50 2.57
35 36 4.934001 CGGGATCACATCATTAGGAGAATG 59.066 45.833 0.00 0.00 0.00 2.67
36 37 4.594920 ACGGGATCACATCATTAGGAGAAT 59.405 41.667 0.00 0.00 0.00 2.40
37 38 3.967326 ACGGGATCACATCATTAGGAGAA 59.033 43.478 0.00 0.00 0.00 2.87
38 39 3.576861 ACGGGATCACATCATTAGGAGA 58.423 45.455 0.00 0.00 0.00 3.71
39 40 4.342862 AACGGGATCACATCATTAGGAG 57.657 45.455 0.00 0.00 0.00 3.69
40 41 5.880164 TTAACGGGATCACATCATTAGGA 57.120 39.130 0.00 0.00 0.00 2.94
41 42 6.230472 TGATTAACGGGATCACATCATTAGG 58.770 40.000 0.00 0.00 0.00 2.69
42 43 7.728847 TTGATTAACGGGATCACATCATTAG 57.271 36.000 0.00 0.00 33.51 1.73
43 44 8.567104 CATTTGATTAACGGGATCACATCATTA 58.433 33.333 0.00 0.00 33.51 1.90
44 45 7.285172 TCATTTGATTAACGGGATCACATCATT 59.715 33.333 0.00 0.00 33.51 2.57
45 46 6.772233 TCATTTGATTAACGGGATCACATCAT 59.228 34.615 0.00 0.00 33.51 2.45
46 47 6.038161 GTCATTTGATTAACGGGATCACATCA 59.962 38.462 0.00 0.00 33.51 3.07
47 48 6.038161 TGTCATTTGATTAACGGGATCACATC 59.962 38.462 0.00 0.00 33.51 3.06
48 49 5.885352 TGTCATTTGATTAACGGGATCACAT 59.115 36.000 0.00 0.00 33.51 3.21
49 50 5.249420 TGTCATTTGATTAACGGGATCACA 58.751 37.500 0.00 0.00 33.51 3.58
50 51 5.811399 TGTCATTTGATTAACGGGATCAC 57.189 39.130 0.00 0.00 33.51 3.06
51 52 5.943416 AGTTGTCATTTGATTAACGGGATCA 59.057 36.000 0.00 0.00 32.73 2.92
52 53 6.093495 TGAGTTGTCATTTGATTAACGGGATC 59.907 38.462 0.00 0.00 32.73 3.36
53 54 5.943416 TGAGTTGTCATTTGATTAACGGGAT 59.057 36.000 0.00 0.00 32.73 3.85
54 55 5.309638 TGAGTTGTCATTTGATTAACGGGA 58.690 37.500 0.00 0.00 32.73 5.14
55 56 5.621197 TGAGTTGTCATTTGATTAACGGG 57.379 39.130 0.00 0.00 32.73 5.28
56 57 6.611381 ACATGAGTTGTCATTTGATTAACGG 58.389 36.000 0.00 0.00 40.84 4.44
70 71 6.620877 TTCCTAACCATAGACATGAGTTGT 57.379 37.500 0.00 0.00 42.79 3.32
71 72 6.878923 TGTTTCCTAACCATAGACATGAGTTG 59.121 38.462 0.00 0.00 33.15 3.16
72 73 7.016153 TGTTTCCTAACCATAGACATGAGTT 57.984 36.000 0.00 0.00 33.15 3.01
73 74 6.620877 TGTTTCCTAACCATAGACATGAGT 57.379 37.500 0.00 0.00 33.15 3.41
74 75 9.046296 GTTATGTTTCCTAACCATAGACATGAG 57.954 37.037 0.00 0.00 30.80 2.90
75 76 7.990886 GGTTATGTTTCCTAACCATAGACATGA 59.009 37.037 0.00 0.00 44.95 3.07
76 77 8.154649 GGTTATGTTTCCTAACCATAGACATG 57.845 38.462 7.24 0.00 44.95 3.21
85 86 7.696992 TCAAAGATGGTTATGTTTCCTAACC 57.303 36.000 5.49 5.49 45.53 2.85
86 87 8.956426 TGATCAAAGATGGTTATGTTTCCTAAC 58.044 33.333 0.00 0.00 28.23 2.34
87 88 9.527157 TTGATCAAAGATGGTTATGTTTCCTAA 57.473 29.630 5.45 0.00 28.23 2.69
88 89 8.956426 GTTGATCAAAGATGGTTATGTTTCCTA 58.044 33.333 10.35 0.00 28.23 2.94
89 90 7.362056 CGTTGATCAAAGATGGTTATGTTTCCT 60.362 37.037 15.34 0.00 28.23 3.36
90 91 6.747280 CGTTGATCAAAGATGGTTATGTTTCC 59.253 38.462 15.34 0.00 28.23 3.13
91 92 7.526608 TCGTTGATCAAAGATGGTTATGTTTC 58.473 34.615 18.50 0.00 28.23 2.78
92 93 7.447374 TCGTTGATCAAAGATGGTTATGTTT 57.553 32.000 18.50 0.00 30.61 2.83
93 94 6.403636 GCTCGTTGATCAAAGATGGTTATGTT 60.404 38.462 21.83 0.00 0.00 2.71
94 95 5.065218 GCTCGTTGATCAAAGATGGTTATGT 59.935 40.000 21.83 0.00 0.00 2.29
95 96 5.295292 AGCTCGTTGATCAAAGATGGTTATG 59.705 40.000 21.83 11.16 0.00 1.90
96 97 5.431765 AGCTCGTTGATCAAAGATGGTTAT 58.568 37.500 21.83 4.91 0.00 1.89
97 98 4.832248 AGCTCGTTGATCAAAGATGGTTA 58.168 39.130 21.83 1.90 0.00 2.85
98 99 3.679389 AGCTCGTTGATCAAAGATGGTT 58.321 40.909 21.83 8.86 0.00 3.67
99 100 3.340814 AGCTCGTTGATCAAAGATGGT 57.659 42.857 21.83 17.63 0.00 3.55
100 101 4.437239 ACTAGCTCGTTGATCAAAGATGG 58.563 43.478 21.83 14.18 0.00 3.51
101 102 5.105063 TGACTAGCTCGTTGATCAAAGATG 58.895 41.667 21.83 16.63 0.00 2.90
102 103 5.330455 TGACTAGCTCGTTGATCAAAGAT 57.670 39.130 21.83 12.82 0.00 2.40
103 104 4.783764 TGACTAGCTCGTTGATCAAAGA 57.216 40.909 20.62 20.62 0.00 2.52
104 105 4.926238 ACTTGACTAGCTCGTTGATCAAAG 59.074 41.667 10.35 12.64 0.00 2.77
105 106 4.883083 ACTTGACTAGCTCGTTGATCAAA 58.117 39.130 10.35 0.00 0.00 2.69
106 107 4.521130 ACTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
107 108 5.836821 ATACTTGACTAGCTCGTTGATCA 57.163 39.130 0.00 0.00 0.00 2.92
108 109 6.375377 CCTATACTTGACTAGCTCGTTGATC 58.625 44.000 0.00 0.00 0.00 2.92
109 110 5.278561 GCCTATACTTGACTAGCTCGTTGAT 60.279 44.000 0.00 0.00 0.00 2.57
110 111 4.036498 GCCTATACTTGACTAGCTCGTTGA 59.964 45.833 0.00 0.00 0.00 3.18
111 112 4.202020 TGCCTATACTTGACTAGCTCGTTG 60.202 45.833 0.00 0.00 0.00 4.10
112 113 3.952323 TGCCTATACTTGACTAGCTCGTT 59.048 43.478 0.00 0.00 0.00 3.85
113 114 3.552875 TGCCTATACTTGACTAGCTCGT 58.447 45.455 0.00 0.00 0.00 4.18
114 115 4.775058 ATGCCTATACTTGACTAGCTCG 57.225 45.455 0.00 0.00 0.00 5.03
115 116 6.827586 AGTATGCCTATACTTGACTAGCTC 57.172 41.667 0.00 0.00 45.57 4.09
116 117 7.392113 CACTAGTATGCCTATACTTGACTAGCT 59.608 40.741 13.21 0.00 45.57 3.32
117 118 7.390996 TCACTAGTATGCCTATACTTGACTAGC 59.609 40.741 13.21 0.00 45.57 3.42
118 119 8.723311 GTCACTAGTATGCCTATACTTGACTAG 58.277 40.741 17.07 0.00 45.57 2.57
119 120 8.215736 TGTCACTAGTATGCCTATACTTGACTA 58.784 37.037 21.11 12.18 46.20 2.59
120 121 7.013464 GTGTCACTAGTATGCCTATACTTGACT 59.987 40.741 21.11 0.00 46.20 3.41
121 122 7.013464 AGTGTCACTAGTATGCCTATACTTGAC 59.987 40.741 17.30 17.30 45.57 3.18
122 123 7.061054 AGTGTCACTAGTATGCCTATACTTGA 58.939 38.462 2.87 6.76 45.57 3.02
123 124 7.229707 AGAGTGTCACTAGTATGCCTATACTTG 59.770 40.741 5.21 6.37 45.57 3.16
124 125 7.229707 CAGAGTGTCACTAGTATGCCTATACTT 59.770 40.741 5.21 0.00 45.57 2.24
126 127 6.487331 ACAGAGTGTCACTAGTATGCCTATAC 59.513 42.308 5.21 0.00 39.57 1.47
127 128 6.602278 ACAGAGTGTCACTAGTATGCCTATA 58.398 40.000 5.21 0.00 0.00 1.31
128 129 5.450453 ACAGAGTGTCACTAGTATGCCTAT 58.550 41.667 5.21 0.00 0.00 2.57
129 130 4.856509 ACAGAGTGTCACTAGTATGCCTA 58.143 43.478 5.21 0.00 0.00 3.93
130 131 3.702792 ACAGAGTGTCACTAGTATGCCT 58.297 45.455 5.21 0.00 0.00 4.75
131 132 4.457834 AACAGAGTGTCACTAGTATGCC 57.542 45.455 5.21 0.00 0.00 4.40
132 133 5.230942 ACAAACAGAGTGTCACTAGTATGC 58.769 41.667 5.21 0.00 0.00 3.14
133 134 6.682746 AGACAAACAGAGTGTCACTAGTATG 58.317 40.000 5.21 5.56 46.44 2.39
134 135 6.902771 AGACAAACAGAGTGTCACTAGTAT 57.097 37.500 5.21 0.00 46.44 2.12
135 136 7.447545 ACATAGACAAACAGAGTGTCACTAGTA 59.552 37.037 5.21 0.00 46.44 1.82
136 137 6.265649 ACATAGACAAACAGAGTGTCACTAGT 59.734 38.462 5.21 5.11 46.44 2.57
137 138 6.682746 ACATAGACAAACAGAGTGTCACTAG 58.317 40.000 5.21 4.44 46.44 2.57
138 139 6.650427 ACATAGACAAACAGAGTGTCACTA 57.350 37.500 5.21 0.00 46.44 2.74
139 140 5.537300 ACATAGACAAACAGAGTGTCACT 57.463 39.130 4.81 4.81 46.44 3.41
140 141 7.598869 TGAATACATAGACAAACAGAGTGTCAC 59.401 37.037 7.26 0.00 46.44 3.67
141 142 7.598869 GTGAATACATAGACAAACAGAGTGTCA 59.401 37.037 7.26 0.00 46.44 3.58
142 143 7.598869 TGTGAATACATAGACAAACAGAGTGTC 59.401 37.037 0.00 0.00 44.75 3.67
143 144 7.385205 GTGTGAATACATAGACAAACAGAGTGT 59.615 37.037 0.00 0.00 39.39 3.55
144 145 7.384932 TGTGTGAATACATAGACAAACAGAGTG 59.615 37.037 0.00 0.00 39.39 3.51
145 146 7.441836 TGTGTGAATACATAGACAAACAGAGT 58.558 34.615 0.00 0.00 39.39 3.24
146 147 7.889589 TGTGTGAATACATAGACAAACAGAG 57.110 36.000 0.00 0.00 39.39 3.35
147 148 7.877612 ACATGTGTGAATACATAGACAAACAGA 59.122 33.333 0.00 0.00 39.17 3.41
148 149 8.032952 ACATGTGTGAATACATAGACAAACAG 57.967 34.615 0.00 0.00 39.17 3.16
149 150 7.977789 ACATGTGTGAATACATAGACAAACA 57.022 32.000 0.00 0.00 39.17 2.83
167 168 4.497473 AACCGGAAACATAACACATGTG 57.503 40.909 24.25 24.25 31.80 3.21
168 169 6.827586 ATTAACCGGAAACATAACACATGT 57.172 33.333 9.46 0.00 0.00 3.21
169 170 7.753659 TGTATTAACCGGAAACATAACACATG 58.246 34.615 9.46 0.00 0.00 3.21
170 171 7.925043 TGTATTAACCGGAAACATAACACAT 57.075 32.000 9.46 0.00 0.00 3.21
171 172 7.741027 TTGTATTAACCGGAAACATAACACA 57.259 32.000 9.46 2.23 0.00 3.72
172 173 9.281075 GAATTGTATTAACCGGAAACATAACAC 57.719 33.333 9.46 0.00 0.00 3.32
173 174 9.233649 AGAATTGTATTAACCGGAAACATAACA 57.766 29.630 9.46 0.14 0.00 2.41
176 177 9.048446 GCTAGAATTGTATTAACCGGAAACATA 57.952 33.333 9.46 0.00 0.00 2.29
177 178 7.554835 TGCTAGAATTGTATTAACCGGAAACAT 59.445 33.333 9.46 0.00 0.00 2.71
178 179 6.879993 TGCTAGAATTGTATTAACCGGAAACA 59.120 34.615 9.46 1.34 0.00 2.83
179 180 7.311364 TGCTAGAATTGTATTAACCGGAAAC 57.689 36.000 9.46 0.00 0.00 2.78
180 181 7.771361 TCATGCTAGAATTGTATTAACCGGAAA 59.229 33.333 9.46 1.61 0.00 3.13
181 182 7.276658 TCATGCTAGAATTGTATTAACCGGAA 58.723 34.615 9.46 0.00 0.00 4.30
182 183 6.822442 TCATGCTAGAATTGTATTAACCGGA 58.178 36.000 9.46 0.00 0.00 5.14
183 184 7.490962 TTCATGCTAGAATTGTATTAACCGG 57.509 36.000 0.00 0.00 0.00 5.28
258 259 4.223923 CCTGAAGGTAATATGCCCTAGAGG 59.776 50.000 0.00 0.00 39.47 3.69
259 260 4.223923 CCCTGAAGGTAATATGCCCTAGAG 59.776 50.000 0.00 0.00 0.00 2.43
260 261 4.168101 CCCTGAAGGTAATATGCCCTAGA 58.832 47.826 0.00 0.00 0.00 2.43
261 262 3.307762 GCCCTGAAGGTAATATGCCCTAG 60.308 52.174 0.00 0.00 38.26 3.02
262 263 2.642807 GCCCTGAAGGTAATATGCCCTA 59.357 50.000 0.00 0.00 38.26 3.53
263 264 1.425448 GCCCTGAAGGTAATATGCCCT 59.575 52.381 0.00 0.00 38.26 5.19
264 265 1.425448 AGCCCTGAAGGTAATATGCCC 59.575 52.381 0.00 0.00 38.26 5.36
265 266 2.959465 AGCCCTGAAGGTAATATGCC 57.041 50.000 0.00 0.00 38.26 4.40
266 267 5.228945 TCTAAGCCCTGAAGGTAATATGC 57.771 43.478 0.00 0.00 38.26 3.14
267 268 5.280215 CCCTCTAAGCCCTGAAGGTAATATG 60.280 48.000 0.00 0.00 38.26 1.78
268 269 4.846940 CCCTCTAAGCCCTGAAGGTAATAT 59.153 45.833 0.00 0.00 38.26 1.28
269 270 4.078219 TCCCTCTAAGCCCTGAAGGTAATA 60.078 45.833 0.00 0.00 38.26 0.98
270 271 3.049344 CCCTCTAAGCCCTGAAGGTAAT 58.951 50.000 0.00 0.00 38.26 1.89
271 272 2.045326 TCCCTCTAAGCCCTGAAGGTAA 59.955 50.000 0.00 0.00 38.26 2.85
272 273 1.649633 TCCCTCTAAGCCCTGAAGGTA 59.350 52.381 0.00 0.00 38.26 3.08
273 274 0.417841 TCCCTCTAAGCCCTGAAGGT 59.582 55.000 0.00 0.00 38.26 3.50
274 275 1.419387 CATCCCTCTAAGCCCTGAAGG 59.581 57.143 0.00 0.00 39.47 3.46
275 276 1.419387 CCATCCCTCTAAGCCCTGAAG 59.581 57.143 0.00 0.00 0.00 3.02
276 277 1.511613 CCATCCCTCTAAGCCCTGAA 58.488 55.000 0.00 0.00 0.00 3.02
277 278 1.056700 GCCATCCCTCTAAGCCCTGA 61.057 60.000 0.00 0.00 0.00 3.86
278 279 1.059006 AGCCATCCCTCTAAGCCCTG 61.059 60.000 0.00 0.00 0.00 4.45
279 280 1.059006 CAGCCATCCCTCTAAGCCCT 61.059 60.000 0.00 0.00 0.00 5.19
284 285 1.500474 CCACTCAGCCATCCCTCTAA 58.500 55.000 0.00 0.00 0.00 2.10
296 297 2.594303 TTGTTGGCCGCCACTCAG 60.594 61.111 13.00 0.00 30.78 3.35
297 298 2.904866 GTTGTTGGCCGCCACTCA 60.905 61.111 13.00 11.88 30.78 3.41
299 300 4.555709 TCGTTGTTGGCCGCCACT 62.556 61.111 13.00 0.00 30.78 4.00
310 311 2.522436 TCCCCTCACCGTCGTTGT 60.522 61.111 0.00 0.00 0.00 3.32
316 317 1.977544 CTCGAACTCCCCTCACCGT 60.978 63.158 0.00 0.00 0.00 4.83
317 318 2.711922 CCTCGAACTCCCCTCACCG 61.712 68.421 0.00 0.00 0.00 4.94
318 319 2.359967 CCCTCGAACTCCCCTCACC 61.360 68.421 0.00 0.00 0.00 4.02
322 323 1.383248 CATCCCCTCGAACTCCCCT 60.383 63.158 0.00 0.00 0.00 4.79
323 324 1.382695 TCATCCCCTCGAACTCCCC 60.383 63.158 0.00 0.00 0.00 4.81
331 332 4.873129 CGCCACGTCATCCCCTCG 62.873 72.222 0.00 0.00 0.00 4.63
397 403 4.858680 GCCCTAACTGCCGCCTCC 62.859 72.222 0.00 0.00 0.00 4.30
406 412 2.767073 GCCTACCCCGCCCTAACT 60.767 66.667 0.00 0.00 0.00 2.24
407 413 2.767073 AGCCTACCCCGCCCTAAC 60.767 66.667 0.00 0.00 0.00 2.34
418 424 0.691078 TCATGACTCCCCCAGCCTAC 60.691 60.000 0.00 0.00 0.00 3.18
419 425 0.399091 CTCATGACTCCCCCAGCCTA 60.399 60.000 0.00 0.00 0.00 3.93
421 427 2.750657 CCTCATGACTCCCCCAGCC 61.751 68.421 0.00 0.00 0.00 4.85
434 440 3.774216 CTCACTTCCTTCTTCCTCCTCAT 59.226 47.826 0.00 0.00 0.00 2.90
441 447 2.039084 TGCTTCCTCACTTCCTTCTTCC 59.961 50.000 0.00 0.00 0.00 3.46
447 453 0.980423 GGTCTGCTTCCTCACTTCCT 59.020 55.000 0.00 0.00 0.00 3.36
448 454 0.687354 TGGTCTGCTTCCTCACTTCC 59.313 55.000 0.00 0.00 0.00 3.46
449 455 2.550830 TTGGTCTGCTTCCTCACTTC 57.449 50.000 0.00 0.00 0.00 3.01
451 457 3.515602 ATTTTGGTCTGCTTCCTCACT 57.484 42.857 0.00 0.00 0.00 3.41
452 458 3.569701 TCAATTTTGGTCTGCTTCCTCAC 59.430 43.478 0.00 0.00 0.00 3.51
453 459 3.569701 GTCAATTTTGGTCTGCTTCCTCA 59.430 43.478 0.00 0.00 0.00 3.86
454 460 3.569701 TGTCAATTTTGGTCTGCTTCCTC 59.430 43.478 0.00 0.00 0.00 3.71
455 461 3.565307 TGTCAATTTTGGTCTGCTTCCT 58.435 40.909 0.00 0.00 0.00 3.36
457 463 4.051237 GGTTGTCAATTTTGGTCTGCTTC 58.949 43.478 0.00 0.00 0.00 3.86
458 464 3.706086 AGGTTGTCAATTTTGGTCTGCTT 59.294 39.130 0.00 0.00 0.00 3.91
460 466 3.181476 ACAGGTTGTCAATTTTGGTCTGC 60.181 43.478 0.00 0.00 0.00 4.26
462 468 5.675684 AAACAGGTTGTCAATTTTGGTCT 57.324 34.783 0.00 0.00 0.00 3.85
464 470 5.799213 TCAAAACAGGTTGTCAATTTTGGT 58.201 33.333 16.48 1.95 39.57 3.67
465 471 5.874261 ACTCAAAACAGGTTGTCAATTTTGG 59.126 36.000 16.48 11.91 39.57 3.28
466 472 6.966435 ACTCAAAACAGGTTGTCAATTTTG 57.034 33.333 12.75 12.75 40.16 2.44
467 473 6.934083 ACAACTCAAAACAGGTTGTCAATTTT 59.066 30.769 5.09 0.00 46.81 1.82
468 474 6.463360 ACAACTCAAAACAGGTTGTCAATTT 58.537 32.000 5.09 0.00 46.81 1.82
469 475 6.036577 ACAACTCAAAACAGGTTGTCAATT 57.963 33.333 5.09 0.00 46.81 2.32
470 476 5.659440 ACAACTCAAAACAGGTTGTCAAT 57.341 34.783 5.09 0.00 46.81 2.57
475 481 6.098679 TGATCAAACAACTCAAAACAGGTTG 58.901 36.000 0.00 0.00 43.84 3.77
476 482 6.279513 TGATCAAACAACTCAAAACAGGTT 57.720 33.333 0.00 0.00 0.00 3.50
477 483 5.913137 TGATCAAACAACTCAAAACAGGT 57.087 34.783 0.00 0.00 0.00 4.00
478 484 6.563422 TCTTGATCAAACAACTCAAAACAGG 58.437 36.000 9.88 0.00 0.00 4.00
479 485 7.380602 GGATCTTGATCAAACAACTCAAAACAG 59.619 37.037 9.88 0.00 0.00 3.16
480 486 7.202526 GGATCTTGATCAAACAACTCAAAACA 58.797 34.615 9.88 0.00 0.00 2.83
481 487 6.360681 CGGATCTTGATCAAACAACTCAAAAC 59.639 38.462 9.88 0.00 0.00 2.43
482 488 6.262049 TCGGATCTTGATCAAACAACTCAAAA 59.738 34.615 9.88 0.00 0.00 2.44
498 504 2.029020 TCTCACCAAGTGTCGGATCTTG 60.029 50.000 14.57 14.57 40.19 3.02
500 506 1.924731 TCTCACCAAGTGTCGGATCT 58.075 50.000 0.00 0.00 34.79 2.75
502 508 3.181454 ACTTTTCTCACCAAGTGTCGGAT 60.181 43.478 0.00 0.00 34.79 4.18
504 510 2.561569 ACTTTTCTCACCAAGTGTCGG 58.438 47.619 0.00 0.00 34.79 4.79
506 512 5.815740 TGAGTTACTTTTCTCACCAAGTGTC 59.184 40.000 0.00 0.00 36.04 3.67
507 513 5.741011 TGAGTTACTTTTCTCACCAAGTGT 58.259 37.500 0.00 0.00 36.04 3.55
508 514 6.483307 TCATGAGTTACTTTTCTCACCAAGTG 59.517 38.462 0.00 0.00 42.30 3.16
509 515 6.591935 TCATGAGTTACTTTTCTCACCAAGT 58.408 36.000 0.00 0.00 42.30 3.16
510 516 7.388776 TCATCATGAGTTACTTTTCTCACCAAG 59.611 37.037 0.09 0.00 42.30 3.61
511 517 7.223584 TCATCATGAGTTACTTTTCTCACCAA 58.776 34.615 0.09 0.00 42.30 3.67
512 518 6.768483 TCATCATGAGTTACTTTTCTCACCA 58.232 36.000 0.09 0.00 42.30 4.17
513 519 7.672983 TTCATCATGAGTTACTTTTCTCACC 57.327 36.000 0.09 0.00 42.30 4.02
514 520 9.387123 GTTTTCATCATGAGTTACTTTTCTCAC 57.613 33.333 0.09 0.00 42.30 3.51
525 531 6.136071 CGAGAAAACGTTTTCATCATGAGTT 58.864 36.000 40.11 24.44 46.81 3.01
528 534 5.666969 ACGAGAAAACGTTTTCATCATGA 57.333 34.783 40.11 0.00 46.81 3.07
529 535 5.788531 GGTACGAGAAAACGTTTTCATCATG 59.211 40.000 40.11 29.10 46.81 3.07
533 539 4.212636 CCAGGTACGAGAAAACGTTTTCAT 59.787 41.667 40.11 30.32 46.81 2.57
534 540 3.556775 CCAGGTACGAGAAAACGTTTTCA 59.443 43.478 40.11 25.18 46.81 2.69
535 541 3.557185 ACCAGGTACGAGAAAACGTTTTC 59.443 43.478 35.52 35.52 44.14 2.29
536 542 3.310501 CACCAGGTACGAGAAAACGTTTT 59.689 43.478 25.46 25.46 44.14 2.43
548 554 2.883386 GACCCTCTATACACCAGGTACG 59.117 54.545 0.00 0.00 34.07 3.67
593 601 2.093181 TCGTTCATTGGATTGACCGGAT 60.093 45.455 9.46 0.00 42.61 4.18
594 602 1.276705 TCGTTCATTGGATTGACCGGA 59.723 47.619 9.46 0.00 42.61 5.14
596 604 2.033747 CGATCGTTCATTGGATTGACCG 60.034 50.000 7.03 0.00 42.61 4.79
598 606 4.112634 TCTCGATCGTTCATTGGATTGAC 58.887 43.478 15.94 0.00 31.44 3.18
599 607 4.385358 TCTCGATCGTTCATTGGATTGA 57.615 40.909 15.94 0.00 33.23 2.57
602 610 5.237344 GGAAATTCTCGATCGTTCATTGGAT 59.763 40.000 15.94 0.00 0.00 3.41
603 611 4.570772 GGAAATTCTCGATCGTTCATTGGA 59.429 41.667 15.94 1.08 0.00 3.53
604 612 4.550831 CGGAAATTCTCGATCGTTCATTGG 60.551 45.833 15.94 2.37 0.00 3.16
605 613 4.508971 CGGAAATTCTCGATCGTTCATTG 58.491 43.478 15.94 1.79 0.00 2.82
619 627 2.296190 AGGTTTGTTGAGGCGGAAATTC 59.704 45.455 0.00 0.00 0.00 2.17
650 658 8.973378 CGCCAAAAACTTTTTGAAGATGTATAA 58.027 29.630 23.11 0.00 0.00 0.98
684 696 2.094182 TCTTCGATCTGTACCTGGTTGC 60.094 50.000 3.84 0.00 0.00 4.17
704 716 2.024414 CCCCGGAGATTGGTGAAAATC 58.976 52.381 0.73 0.00 36.91 2.17
742 755 7.642082 TTTTACTCTCCAGTCTCTATGGTAC 57.358 40.000 0.00 0.00 39.01 3.34
776 789 3.375299 CCTCCGAATGTGGATCAAGTTTC 59.625 47.826 0.00 0.00 37.41 2.78
789 802 5.073311 TCTTGAAAGTACTCCTCCGAATG 57.927 43.478 0.00 0.00 0.00 2.67
795 808 6.645827 GTGTTAACCTCTTGAAAGTACTCCTC 59.354 42.308 2.48 0.00 0.00 3.71
798 811 7.781548 TTGTGTTAACCTCTTGAAAGTACTC 57.218 36.000 2.48 0.00 0.00 2.59
809 822 2.490991 GACGGCTTTGTGTTAACCTCT 58.509 47.619 2.48 0.00 0.00 3.69
812 825 0.939419 ACGACGGCTTTGTGTTAACC 59.061 50.000 2.48 0.00 0.00 2.85
813 826 1.593933 TGACGACGGCTTTGTGTTAAC 59.406 47.619 0.65 0.00 0.00 2.01
815 828 2.063266 GATGACGACGGCTTTGTGTTA 58.937 47.619 0.65 0.00 0.00 2.41
816 829 0.865769 GATGACGACGGCTTTGTGTT 59.134 50.000 0.65 0.00 0.00 3.32
817 830 0.949105 GGATGACGACGGCTTTGTGT 60.949 55.000 0.65 0.00 0.00 3.72
819 832 0.034896 AAGGATGACGACGGCTTTGT 59.965 50.000 0.65 0.00 0.00 2.83
920 933 5.588648 AGACTAGTAGCAGAGCAGAGTTTAG 59.411 44.000 0.00 0.00 0.00 1.85
986 1003 1.852067 GCACATCGGTCCGCTGTTTT 61.852 55.000 17.81 0.00 33.97 2.43
1281 1298 1.449246 GAAGAGCATGGACAGCGCT 60.449 57.895 2.64 2.64 44.07 5.92
1458 1475 1.099689 AGAGAACAGAGCGGTAGAGC 58.900 55.000 0.00 0.00 37.41 4.09
1590 1607 2.039137 AGGTCGGGGAGGGAGAAC 59.961 66.667 0.00 0.00 0.00 3.01
1773 1790 0.384353 GCACGAAGTTTGAAGCCGAC 60.384 55.000 0.00 0.00 41.61 4.79
1782 1799 1.007336 CGCCGAGTAGCACGAAGTTT 61.007 55.000 0.00 0.00 41.61 2.66
1916 1933 1.227527 CACTCCAAGCACACCGACA 60.228 57.895 0.00 0.00 0.00 4.35
1927 1944 0.759812 TCGTACCACCACCACTCCAA 60.760 55.000 0.00 0.00 0.00 3.53
2160 2177 2.740714 GAACGACATGGCCACGAGC 61.741 63.158 19.89 8.00 42.60 5.03
2164 2181 3.027170 CTGCGAACGACATGGCCAC 62.027 63.158 8.16 0.00 0.00 5.01
2271 2288 2.402388 CAATTGCCGAGCTCGCAG 59.598 61.111 30.49 18.67 38.18 5.18
2283 2300 3.039202 GACGGTCTGCGGGCAATTG 62.039 63.158 0.00 0.00 0.00 2.32
2352 2369 2.029623 AGATAGAAAGCGCCGAGGTTA 58.970 47.619 2.29 0.00 40.06 2.85
2397 2414 2.388232 GCCGTACCAGAACGCAAGG 61.388 63.158 0.00 0.00 41.51 3.61
2411 2428 3.591835 CAACAAAGCCCACGCCGT 61.592 61.111 0.00 0.00 34.57 5.68
2424 2441 2.682846 CCCAGCCATAGCCCAACA 59.317 61.111 0.00 0.00 41.25 3.33
2526 2543 3.558411 GACGATGTCAGCGCCTGC 61.558 66.667 10.99 0.00 43.24 4.85
2832 2853 6.110411 AGAACCGGAGAACATCTTAAGAAA 57.890 37.500 9.46 0.00 0.00 2.52
2836 2857 7.039882 GTGATAAGAACCGGAGAACATCTTAA 58.960 38.462 9.46 0.00 36.50 1.85
2954 2984 7.615757 ACCCAAAACAAGAGCTTAGCTAATTAT 59.384 33.333 6.75 0.00 39.88 1.28
3090 3277 1.248486 GGACAGGGCCAAAGAAGAAC 58.752 55.000 6.18 0.00 0.00 3.01
3108 3295 8.672823 AAAATAGGTATTTAAAGCTCTACCGG 57.327 34.615 0.00 0.00 38.90 5.28
3138 3325 8.864069 ACACTTCGAGATCTAGATTTACATTG 57.136 34.615 6.70 2.65 0.00 2.82
3154 3341 3.978687 ACCACTAGTTGAACACTTCGAG 58.021 45.455 0.08 0.00 36.88 4.04
3190 3377 9.525409 GGTGTGTATTTTACGTGTCTATTAGAT 57.475 33.333 0.00 0.00 0.00 1.98
3196 3383 5.840715 TGTGGTGTGTATTTTACGTGTCTA 58.159 37.500 0.00 0.00 0.00 2.59
3233 3421 4.556501 CGCTCAACCAAACATGTTGTACAT 60.557 41.667 12.82 0.00 42.82 2.29
3290 3478 8.143835 AGTGAAATCTAATCCACTTTGTTTTGG 58.856 33.333 0.00 0.00 36.57 3.28
3295 3483 6.265196 TGCAAGTGAAATCTAATCCACTTTGT 59.735 34.615 0.00 0.00 44.57 2.83
3307 3495 6.116126 GGTTATCTAGGTGCAAGTGAAATCT 58.884 40.000 0.00 0.00 0.00 2.40
3316 3504 6.148150 CGTTTTAAGTGGTTATCTAGGTGCAA 59.852 38.462 0.00 0.00 0.00 4.08
3339 3527 8.804688 TGTTTCAATTTTTCGATATTTTCCGT 57.195 26.923 0.00 0.00 0.00 4.69
3357 3545 8.579863 ACCAAAACCATTTCAAAAATGTTTCAA 58.420 25.926 10.55 0.00 30.43 2.69
3359 3547 8.239998 TCACCAAAACCATTTCAAAAATGTTTC 58.760 29.630 10.55 0.00 30.43 2.78
3397 3586 5.351465 TCATTTCTCCATGAAACTTAGACGC 59.649 40.000 0.00 0.00 46.08 5.19
3514 3709 6.861065 TTTCTCGAAATTATATGCCCAGTC 57.139 37.500 0.00 0.00 0.00 3.51
3560 3755 9.883142 TCAGTGTCAAATAAGGAAACAAATTTT 57.117 25.926 0.00 0.00 0.00 1.82
3561 3756 9.883142 TTCAGTGTCAAATAAGGAAACAAATTT 57.117 25.926 0.00 0.00 0.00 1.82
3562 3757 9.883142 TTTCAGTGTCAAATAAGGAAACAAATT 57.117 25.926 0.00 0.00 0.00 1.82
3563 3758 9.883142 TTTTCAGTGTCAAATAAGGAAACAAAT 57.117 25.926 0.00 0.00 0.00 2.32
3564 3759 9.712305 TTTTTCAGTGTCAAATAAGGAAACAAA 57.288 25.926 0.00 0.00 0.00 2.83
3565 3760 9.364989 CTTTTTCAGTGTCAAATAAGGAAACAA 57.635 29.630 0.00 0.00 0.00 2.83
3566 3761 8.527810 ACTTTTTCAGTGTCAAATAAGGAAACA 58.472 29.630 0.00 0.00 32.83 2.83
3567 3762 8.926715 ACTTTTTCAGTGTCAAATAAGGAAAC 57.073 30.769 0.00 0.00 32.83 2.78
3568 3763 9.936759 AAACTTTTTCAGTGTCAAATAAGGAAA 57.063 25.926 0.00 0.00 35.12 3.13
3569 3764 9.936759 AAAACTTTTTCAGTGTCAAATAAGGAA 57.063 25.926 0.00 0.00 35.12 3.36
3570 3765 9.936759 AAAAACTTTTTCAGTGTCAAATAAGGA 57.063 25.926 0.00 0.00 35.12 3.36
3575 3770 8.935844 GGAAGAAAAACTTTTTCAGTGTCAAAT 58.064 29.630 23.02 2.88 39.13 2.32
3576 3771 7.386573 GGGAAGAAAAACTTTTTCAGTGTCAAA 59.613 33.333 23.02 0.00 39.13 2.69
3577 3772 6.871492 GGGAAGAAAAACTTTTTCAGTGTCAA 59.129 34.615 23.02 0.00 39.13 3.18
3578 3773 6.210584 AGGGAAGAAAAACTTTTTCAGTGTCA 59.789 34.615 23.02 0.00 39.13 3.58
3579 3774 6.631016 AGGGAAGAAAAACTTTTTCAGTGTC 58.369 36.000 23.02 15.49 39.13 3.67
3580 3775 6.605471 AGGGAAGAAAAACTTTTTCAGTGT 57.395 33.333 23.02 9.71 39.13 3.55
3581 3776 9.599866 AAATAGGGAAGAAAAACTTTTTCAGTG 57.400 29.630 23.02 0.00 39.13 3.66
3582 3777 9.599866 CAAATAGGGAAGAAAAACTTTTTCAGT 57.400 29.630 23.02 13.60 39.13 3.41
3583 3778 9.816354 TCAAATAGGGAAGAAAAACTTTTTCAG 57.184 29.630 23.02 5.71 39.13 3.02
3584 3779 9.594478 GTCAAATAGGGAAGAAAAACTTTTTCA 57.406 29.630 23.02 7.16 39.13 2.69
3585 3780 9.594478 TGTCAAATAGGGAAGAAAAACTTTTTC 57.406 29.630 16.27 16.27 39.13 2.29
3634 3829 9.301153 GGCTCAAAATAAACGAAAATGTCATAT 57.699 29.630 0.00 0.00 0.00 1.78
3635 3830 8.519526 AGGCTCAAAATAAACGAAAATGTCATA 58.480 29.630 0.00 0.00 0.00 2.15
3636 3831 7.378181 AGGCTCAAAATAAACGAAAATGTCAT 58.622 30.769 0.00 0.00 0.00 3.06
3637 3832 6.744112 AGGCTCAAAATAAACGAAAATGTCA 58.256 32.000 0.00 0.00 0.00 3.58
3638 3833 8.736751 TTAGGCTCAAAATAAACGAAAATGTC 57.263 30.769 0.00 0.00 0.00 3.06
3639 3834 9.705290 ATTTAGGCTCAAAATAAACGAAAATGT 57.295 25.926 0.00 0.00 0.00 2.71
3640 3835 9.956797 CATTTAGGCTCAAAATAAACGAAAATG 57.043 29.630 0.00 0.00 0.00 2.32
3641 3836 9.921637 TCATTTAGGCTCAAAATAAACGAAAAT 57.078 25.926 0.00 0.00 0.00 1.82
3642 3837 9.187455 GTCATTTAGGCTCAAAATAAACGAAAA 57.813 29.630 0.00 0.00 0.00 2.29
3643 3838 8.353684 TGTCATTTAGGCTCAAAATAAACGAAA 58.646 29.630 0.00 0.00 0.00 3.46
3644 3839 7.806014 GTGTCATTTAGGCTCAAAATAAACGAA 59.194 33.333 0.00 0.00 0.00 3.85
3645 3840 7.041030 TGTGTCATTTAGGCTCAAAATAAACGA 60.041 33.333 0.00 0.00 0.00 3.85
3646 3841 7.081349 TGTGTCATTTAGGCTCAAAATAAACG 58.919 34.615 0.00 0.00 0.00 3.60
3647 3842 8.863049 CATGTGTCATTTAGGCTCAAAATAAAC 58.137 33.333 0.00 0.00 0.00 2.01
3648 3843 8.801299 TCATGTGTCATTTAGGCTCAAAATAAA 58.199 29.630 0.00 0.00 0.00 1.40
3649 3844 8.347004 TCATGTGTCATTTAGGCTCAAAATAA 57.653 30.769 0.00 0.00 0.00 1.40
3650 3845 7.936496 TCATGTGTCATTTAGGCTCAAAATA 57.064 32.000 0.00 0.00 0.00 1.40
3651 3846 6.839124 TCATGTGTCATTTAGGCTCAAAAT 57.161 33.333 0.00 0.00 0.00 1.82
3652 3847 6.647334 TTCATGTGTCATTTAGGCTCAAAA 57.353 33.333 0.00 0.00 0.00 2.44
3653 3848 6.647334 TTTCATGTGTCATTTAGGCTCAAA 57.353 33.333 0.00 0.00 0.00 2.69
3654 3849 6.489700 TCTTTTCATGTGTCATTTAGGCTCAA 59.510 34.615 0.00 0.00 0.00 3.02
3655 3850 6.003326 TCTTTTCATGTGTCATTTAGGCTCA 58.997 36.000 0.00 0.00 0.00 4.26
3656 3851 6.150140 AGTCTTTTCATGTGTCATTTAGGCTC 59.850 38.462 0.00 0.00 0.00 4.70
3657 3852 6.006449 AGTCTTTTCATGTGTCATTTAGGCT 58.994 36.000 0.00 0.00 0.00 4.58
3658 3853 6.150140 AGAGTCTTTTCATGTGTCATTTAGGC 59.850 38.462 0.00 0.00 0.00 3.93
3659 3854 7.678947 AGAGTCTTTTCATGTGTCATTTAGG 57.321 36.000 0.00 0.00 0.00 2.69
3660 3855 8.997323 AGAAGAGTCTTTTCATGTGTCATTTAG 58.003 33.333 6.88 0.00 0.00 1.85
3661 3856 8.777413 CAGAAGAGTCTTTTCATGTGTCATTTA 58.223 33.333 6.88 0.00 28.78 1.40
3662 3857 7.646314 CAGAAGAGTCTTTTCATGTGTCATTT 58.354 34.615 6.88 0.00 28.78 2.32
3663 3858 6.293845 GCAGAAGAGTCTTTTCATGTGTCATT 60.294 38.462 6.88 0.00 28.78 2.57
3664 3859 5.180868 GCAGAAGAGTCTTTTCATGTGTCAT 59.819 40.000 6.88 0.00 28.78 3.06
3665 3860 4.512944 GCAGAAGAGTCTTTTCATGTGTCA 59.487 41.667 6.88 0.00 28.78 3.58
3666 3861 4.083590 GGCAGAAGAGTCTTTTCATGTGTC 60.084 45.833 6.88 0.00 28.78 3.67
3667 3862 3.817647 GGCAGAAGAGTCTTTTCATGTGT 59.182 43.478 6.88 0.00 28.78 3.72
3668 3863 3.190118 GGGCAGAAGAGTCTTTTCATGTG 59.810 47.826 6.88 0.00 28.78 3.21
3669 3864 3.416156 GGGCAGAAGAGTCTTTTCATGT 58.584 45.455 6.88 0.00 28.78 3.21
3670 3865 2.751806 GGGGCAGAAGAGTCTTTTCATG 59.248 50.000 6.88 5.55 28.78 3.07
3671 3866 2.646798 AGGGGCAGAAGAGTCTTTTCAT 59.353 45.455 6.88 0.00 28.78 2.57
3672 3867 2.039084 GAGGGGCAGAAGAGTCTTTTCA 59.961 50.000 6.88 0.00 28.78 2.69
3673 3868 2.039084 TGAGGGGCAGAAGAGTCTTTTC 59.961 50.000 6.88 0.00 28.78 2.29
3674 3869 2.057922 TGAGGGGCAGAAGAGTCTTTT 58.942 47.619 6.88 0.00 28.78 2.27
3675 3870 1.734655 TGAGGGGCAGAAGAGTCTTT 58.265 50.000 6.88 0.00 28.78 2.52
3676 3871 1.558756 CATGAGGGGCAGAAGAGTCTT 59.441 52.381 4.68 4.68 28.78 3.01
3677 3872 1.202330 CATGAGGGGCAGAAGAGTCT 58.798 55.000 0.00 0.00 32.85 3.24
3678 3873 0.908198 ACATGAGGGGCAGAAGAGTC 59.092 55.000 0.00 0.00 0.00 3.36
3679 3874 0.617413 CACATGAGGGGCAGAAGAGT 59.383 55.000 0.00 0.00 0.00 3.24
3680 3875 0.107312 CCACATGAGGGGCAGAAGAG 60.107 60.000 0.00 0.00 0.00 2.85
3681 3876 0.842030 ACCACATGAGGGGCAGAAGA 60.842 55.000 14.11 0.00 0.00 2.87
3682 3877 0.911769 TACCACATGAGGGGCAGAAG 59.088 55.000 14.11 0.00 0.00 2.85
3683 3878 1.212688 CATACCACATGAGGGGCAGAA 59.787 52.381 14.11 0.00 0.00 3.02
3684 3879 0.839277 CATACCACATGAGGGGCAGA 59.161 55.000 14.11 0.00 0.00 4.26
3685 3880 0.548031 ACATACCACATGAGGGGCAG 59.452 55.000 14.11 3.28 0.00 4.85
3686 3881 0.255604 CACATACCACATGAGGGGCA 59.744 55.000 14.11 0.00 0.00 5.36
3687 3882 0.255890 ACACATACCACATGAGGGGC 59.744 55.000 14.11 0.00 0.00 5.80
3688 3883 1.281867 ACACACATACCACATGAGGGG 59.718 52.381 14.11 7.61 0.00 4.79
3689 3884 2.358957 CACACACATACCACATGAGGG 58.641 52.381 14.11 10.10 0.00 4.30
3690 3885 2.358957 CCACACACATACCACATGAGG 58.641 52.381 7.74 7.74 0.00 3.86
3691 3886 2.358957 CCCACACACATACCACATGAG 58.641 52.381 0.00 0.00 0.00 2.90
3692 3887 1.004161 CCCCACACACATACCACATGA 59.996 52.381 0.00 0.00 0.00 3.07
3693 3888 1.462616 CCCCACACACATACCACATG 58.537 55.000 0.00 0.00 0.00 3.21
3694 3889 0.331278 CCCCCACACACATACCACAT 59.669 55.000 0.00 0.00 0.00 3.21
3695 3890 1.764422 CCCCCACACACATACCACA 59.236 57.895 0.00 0.00 0.00 4.17
3696 3891 4.734652 CCCCCACACACATACCAC 57.265 61.111 0.00 0.00 0.00 4.16
3710 3905 3.518068 GTGTGCGCTATTGCCCCC 61.518 66.667 9.73 0.00 35.36 5.40
3711 3906 2.749839 TGTGTGCGCTATTGCCCC 60.750 61.111 9.73 0.00 35.36 5.80
3712 3907 2.331893 TGTGTGTGCGCTATTGCCC 61.332 57.895 9.73 0.00 35.36 5.36
3713 3908 3.262936 TGTGTGTGCGCTATTGCC 58.737 55.556 9.73 0.00 35.36 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.