Multiple sequence alignment - TraesCS7A01G353500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G353500 chr7A 100.000 5832 0 0 1 5832 517522112 517516281 0.000000e+00 10770.0
1 TraesCS7A01G353500 chr7A 81.879 149 24 3 3524 3669 679361322 679361470 7.940000e-24 122.0
2 TraesCS7A01G353500 chr7A 81.879 149 24 3 3524 3669 679375969 679376117 7.940000e-24 122.0
3 TraesCS7A01G353500 chr7A 81.208 149 25 3 3524 3669 679387437 679387585 3.690000e-22 117.0
4 TraesCS7A01G353500 chr7A 96.610 59 2 0 3364 3422 517518666 517518608 1.340000e-16 99.0
5 TraesCS7A01G353500 chr7A 96.610 59 2 0 3447 3505 517518749 517518691 1.340000e-16 99.0
6 TraesCS7A01G353500 chr7D 88.683 1131 69 20 741 1841 478217947 478219048 0.000000e+00 1325.0
7 TraesCS7A01G353500 chr7D 88.673 927 59 20 2494 3410 478219798 478220688 0.000000e+00 1088.0
8 TraesCS7A01G353500 chr7D 91.964 560 37 8 3447 4003 478220644 478221198 0.000000e+00 778.0
9 TraesCS7A01G353500 chr7D 91.772 474 26 7 4555 5019 478221856 478222325 0.000000e+00 647.0
10 TraesCS7A01G353500 chr7D 86.167 600 73 8 4 595 421333131 421332534 1.770000e-179 640.0
11 TraesCS7A01G353500 chr7D 93.782 386 23 1 1874 2259 478219035 478219419 3.920000e-161 579.0
12 TraesCS7A01G353500 chr7D 84.441 572 52 20 4008 4548 478221250 478221815 4.000000e-146 529.0
13 TraesCS7A01G353500 chr7D 88.811 286 24 5 5160 5445 478222343 478222620 1.560000e-90 344.0
14 TraesCS7A01G353500 chr7D 95.082 183 9 0 2287 2469 478219535 478219717 7.390000e-74 289.0
15 TraesCS7A01G353500 chr7D 80.749 374 35 20 5460 5832 478222604 478222941 2.090000e-64 257.0
16 TraesCS7A01G353500 chr7D 100.000 32 0 0 1846 1877 94751558 94751527 6.310000e-05 60.2
17 TraesCS7A01G353500 chr7B 87.500 1128 71 29 741 1843 503373298 503374380 0.000000e+00 1238.0
18 TraesCS7A01G353500 chr7B 90.198 857 51 21 3447 4291 503376015 503376850 0.000000e+00 1086.0
19 TraesCS7A01G353500 chr7B 88.172 930 64 26 2494 3410 503375164 503376060 0.000000e+00 1066.0
20 TraesCS7A01G353500 chr7B 91.631 466 24 5 4555 5019 503377136 503377587 1.070000e-176 630.0
21 TraesCS7A01G353500 chr7B 82.442 729 93 21 4 710 718347132 718346417 6.460000e-169 604.0
22 TraesCS7A01G353500 chr7B 92.132 394 16 4 1874 2259 503374365 503374751 5.140000e-150 542.0
23 TraesCS7A01G353500 chr7B 82.201 309 31 11 5528 5832 503378634 503378922 1.620000e-60 244.0
24 TraesCS7A01G353500 chr7B 96.552 145 5 0 2325 2469 503374939 503375083 2.100000e-59 241.0
25 TraesCS7A01G353500 chr7B 81.350 311 31 13 5528 5832 503409588 503409877 1.630000e-55 228.0
26 TraesCS7A01G353500 chr7B 84.127 252 17 15 4319 4548 503376845 503377095 7.610000e-54 222.0
27 TraesCS7A01G353500 chr7B 92.248 129 9 1 5065 5193 503377586 503377713 1.290000e-41 182.0
28 TraesCS7A01G353500 chr7B 93.333 45 3 0 2287 2331 503374867 503374911 3.770000e-07 67.6
29 TraesCS7A01G353500 chr2D 86.567 603 70 9 1 594 196461714 196462314 0.000000e+00 654.0
30 TraesCS7A01G353500 chr2D 84.493 503 70 6 5 500 560983167 560983668 1.890000e-134 490.0
31 TraesCS7A01G353500 chr2D 86.957 138 16 2 1048 1184 91713117 91713253 2.810000e-33 154.0
32 TraesCS7A01G353500 chr3D 88.868 530 59 0 8 537 460925239 460925768 0.000000e+00 652.0
33 TraesCS7A01G353500 chr3B 88.555 533 60 1 5 537 611138700 611139231 0.000000e+00 645.0
34 TraesCS7A01G353500 chr3B 81.071 280 36 12 4629 4903 737458132 737458399 2.130000e-49 207.0
35 TraesCS7A01G353500 chr3B 81.071 280 36 12 4629 4903 737493383 737493650 2.130000e-49 207.0
36 TraesCS7A01G353500 chr3B 100.000 33 0 0 1845 1877 436224375 436224343 1.750000e-05 62.1
37 TraesCS7A01G353500 chr3A 84.864 588 78 10 5 582 387884549 387885135 3.030000e-162 582.0
38 TraesCS7A01G353500 chr3A 86.607 112 10 4 4782 4893 691951752 691951646 1.030000e-22 119.0
39 TraesCS7A01G353500 chr6B 84.909 550 80 3 8 556 687538931 687538384 2.370000e-153 553.0
40 TraesCS7A01G353500 chr6B 85.463 227 33 0 2006 2232 15932717 15932491 2.720000e-58 237.0
41 TraesCS7A01G353500 chr6B 89.474 133 14 0 1054 1186 15933670 15933538 1.010000e-37 169.0
42 TraesCS7A01G353500 chr6B 84.559 136 16 4 1048 1181 674317238 674317370 4.740000e-26 130.0
43 TraesCS7A01G353500 chr6A 82.562 562 88 7 4 556 80520112 80519552 2.440000e-133 486.0
44 TraesCS7A01G353500 chr6A 84.211 228 36 0 2005 2232 9050299 9050526 7.610000e-54 222.0
45 TraesCS7A01G353500 chr6A 84.831 178 22 3 1013 1186 9049272 9049448 2.160000e-39 174.0
46 TraesCS7A01G353500 chr6A 100.000 37 0 0 1844 1880 419771598 419771634 1.050000e-07 69.4
47 TraesCS7A01G353500 chr6A 96.875 32 1 0 1844 1875 77987967 77987936 3.000000e-03 54.7
48 TraesCS7A01G353500 chr6D 89.313 131 10 3 1060 1186 8792376 8792246 1.680000e-35 161.0
49 TraesCS7A01G353500 chr2B 82.530 166 22 6 1026 1190 118305235 118305394 7.880000e-29 139.0
50 TraesCS7A01G353500 chr2B 100.000 35 0 0 1844 1878 797260179 797260213 1.360000e-06 65.8
51 TraesCS7A01G353500 chrUn 86.607 112 10 4 4782 4893 45272525 45272631 1.030000e-22 119.0
52 TraesCS7A01G353500 chrUn 86.607 112 10 4 4782 4893 358830628 358830522 1.030000e-22 119.0
53 TraesCS7A01G353500 chrUn 86.607 112 10 4 4782 4893 391511751 391511645 1.030000e-22 119.0
54 TraesCS7A01G353500 chrUn 86.607 112 10 4 4782 4893 391516650 391516544 1.030000e-22 119.0
55 TraesCS7A01G353500 chrUn 81.208 149 25 3 3524 3669 356064985 356064837 3.690000e-22 117.0
56 TraesCS7A01G353500 chrUn 81.208 149 25 3 3524 3669 419940931 419940783 3.690000e-22 117.0
57 TraesCS7A01G353500 chrUn 100.000 35 0 0 1844 1878 302674845 302674811 1.360000e-06 65.8
58 TraesCS7A01G353500 chr2A 97.368 38 0 1 1844 1880 199801069 199801106 4.880000e-06 63.9
59 TraesCS7A01G353500 chr2A 100.000 28 0 0 1844 1871 738335332 738335359 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G353500 chr7A 517516281 517522112 5831 True 3656.000000 10770 97.740000 1 5832 3 chr7A.!!$R1 5831
1 TraesCS7A01G353500 chr7D 478217947 478222941 4994 False 648.444444 1325 89.328556 741 5832 9 chr7D.!!$F1 5091
2 TraesCS7A01G353500 chr7D 421332534 421333131 597 True 640.000000 640 86.167000 4 595 1 chr7D.!!$R2 591
3 TraesCS7A01G353500 chr7B 718346417 718347132 715 True 604.000000 604 82.442000 4 710 1 chr7B.!!$R1 706
4 TraesCS7A01G353500 chr7B 503373298 503378922 5624 False 551.860000 1238 89.809400 741 5832 10 chr7B.!!$F2 5091
5 TraesCS7A01G353500 chr2D 196461714 196462314 600 False 654.000000 654 86.567000 1 594 1 chr2D.!!$F2 593
6 TraesCS7A01G353500 chr2D 560983167 560983668 501 False 490.000000 490 84.493000 5 500 1 chr2D.!!$F3 495
7 TraesCS7A01G353500 chr3D 460925239 460925768 529 False 652.000000 652 88.868000 8 537 1 chr3D.!!$F1 529
8 TraesCS7A01G353500 chr3B 611138700 611139231 531 False 645.000000 645 88.555000 5 537 1 chr3B.!!$F1 532
9 TraesCS7A01G353500 chr3A 387884549 387885135 586 False 582.000000 582 84.864000 5 582 1 chr3A.!!$F1 577
10 TraesCS7A01G353500 chr6B 687538384 687538931 547 True 553.000000 553 84.909000 8 556 1 chr6B.!!$R1 548
11 TraesCS7A01G353500 chr6B 15932491 15933670 1179 True 203.000000 237 87.468500 1054 2232 2 chr6B.!!$R2 1178
12 TraesCS7A01G353500 chr6A 80519552 80520112 560 True 486.000000 486 82.562000 4 556 1 chr6A.!!$R2 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 145 0.039256 CCACCAATGCCGACACAAAG 60.039 55.0 0.00 0.00 0.00 2.77 F
224 226 0.104304 AGACTTGGTTCGCGAACTGT 59.896 50.0 40.90 34.72 40.94 3.55 F
786 828 0.109723 ACCGCCACACTTACAACCAT 59.890 50.0 0.00 0.00 0.00 3.55 F
1485 1886 0.181587 TGCAGTTTTCTTGGTCCCGA 59.818 50.0 0.00 0.00 0.00 5.14 F
2422 3096 0.544833 TTGCCTACTACCACCCGGAA 60.545 55.0 0.73 0.00 35.59 4.30 F
3511 4268 0.750850 TATCTGTTGCCTAGGCCGTC 59.249 55.0 30.81 19.84 41.09 4.79 F
4300 5111 0.393132 GAGGCCCTGTCTTTAGTGGC 60.393 60.0 0.00 0.00 41.42 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1412 1498 0.179113 GAGAGAGCAGAGGAAAGGCG 60.179 60.000 0.00 0.0 0.00 5.52 R
1844 2260 1.005097 TGAAGATTGCTCACCATGCCT 59.995 47.619 0.00 0.0 0.00 4.75 R
2416 3090 0.179000 CCAGTCCTCTTGATTCCGGG 59.821 60.000 0.00 0.0 0.00 5.73 R
2614 3359 1.219393 GAAGGAACCCTCTGGAGCG 59.781 63.158 0.00 0.0 30.89 5.03 R
3635 4392 0.519519 TGGAAACAATTAGTGCGCCG 59.480 50.000 4.18 0.0 37.44 6.46 R
4422 5239 0.744281 AACCGCTGTTTGAACCCAAG 59.256 50.000 0.00 0.0 33.23 3.61 R
5451 6812 2.900546 AGGAGAACCTACCAGTGTCAAG 59.099 50.000 0.00 0.0 45.83 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 1.216710 GAGGAGGCCACTCAACTCG 59.783 63.158 19.26 0.00 45.81 4.18
111 113 0.318762 GGCCACTCAACTCGAGAAGT 59.681 55.000 21.68 15.77 45.45 3.01
143 145 0.039256 CCACCAATGCCGACACAAAG 60.039 55.000 0.00 0.00 0.00 2.77
207 209 1.186200 CATGTCACCGGAGAGGAAGA 58.814 55.000 9.46 0.00 45.00 2.87
222 224 1.499049 GAAGACTTGGTTCGCGAACT 58.501 50.000 40.90 27.28 40.94 3.01
224 226 0.104304 AGACTTGGTTCGCGAACTGT 59.896 50.000 40.90 34.72 40.94 3.55
304 311 3.161866 GGTCCATTTTGAAGGCTGGTTA 58.838 45.455 0.00 0.00 0.00 2.85
315 322 3.118454 CTGGTTAGTGTGCCGGCG 61.118 66.667 23.90 0.00 0.00 6.46
365 373 2.887152 GTCCATTTTGAAGGCTGACTGT 59.113 45.455 0.00 0.00 0.00 3.55
373 382 2.280797 GGCTGACTGTTGTGCCGA 60.281 61.111 4.43 0.00 35.79 5.54
421 431 3.565307 ACTTGTCCATTTTGAAGGCTGA 58.435 40.909 0.00 0.00 0.00 4.26
440 450 3.207547 CTCGTGTGCCGGTCACTGA 62.208 63.158 23.38 19.73 45.81 3.41
449 459 1.948104 CCGGTCACTGACTTTGTTGA 58.052 50.000 9.08 0.00 32.47 3.18
451 461 2.276201 CGGTCACTGACTTTGTTGACA 58.724 47.619 9.08 0.00 32.47 3.58
464 475 5.127031 ACTTTGTTGACAGCACCAAACTTAT 59.873 36.000 0.00 0.00 32.41 1.73
466 478 4.203226 TGTTGACAGCACCAAACTTATGA 58.797 39.130 0.00 0.00 0.00 2.15
482 494 7.437713 AACTTATGATGACCATTCTGTAGGA 57.562 36.000 0.00 0.00 36.71 2.94
493 506 1.552578 TCTGTAGGACGCTGGCTTTA 58.447 50.000 0.00 0.00 0.00 1.85
563 588 0.733909 GCCGCTGCCATTGTCTTTTC 60.734 55.000 0.00 0.00 0.00 2.29
577 602 3.052036 GTCTTTTCGTTTGCATGCACAT 58.948 40.909 22.58 0.00 0.00 3.21
583 608 0.456653 GTTTGCATGCACATCGGACC 60.457 55.000 22.58 0.00 0.00 4.46
588 613 1.541015 GCATGCACATCGGACCAGATA 60.541 52.381 14.21 0.00 0.00 1.98
617 653 1.682854 CGCCCAGCATATCCACAAATT 59.317 47.619 0.00 0.00 0.00 1.82
619 655 2.694628 GCCCAGCATATCCACAAATTCA 59.305 45.455 0.00 0.00 0.00 2.57
621 657 3.319972 CCCAGCATATCCACAAATTCAGG 59.680 47.826 0.00 0.00 0.00 3.86
623 659 2.620115 AGCATATCCACAAATTCAGGCG 59.380 45.455 0.00 0.00 0.00 5.52
631 667 1.086696 CAAATTCAGGCGGACACGAT 58.913 50.000 0.00 0.00 44.60 3.73
645 682 2.275089 CGATCCATTGCCACCCCA 59.725 61.111 0.00 0.00 0.00 4.96
648 685 0.536724 GATCCATTGCCACCCCAAAC 59.463 55.000 0.00 0.00 0.00 2.93
649 686 0.178909 ATCCATTGCCACCCCAAACA 60.179 50.000 0.00 0.00 0.00 2.83
651 688 0.831288 CCATTGCCACCCCAAACAGA 60.831 55.000 0.00 0.00 0.00 3.41
653 690 2.455557 CATTGCCACCCCAAACAGATA 58.544 47.619 0.00 0.00 0.00 1.98
655 692 2.917713 TGCCACCCCAAACAGATAAT 57.082 45.000 0.00 0.00 0.00 1.28
658 695 4.277476 TGCCACCCCAAACAGATAATAAG 58.723 43.478 0.00 0.00 0.00 1.73
660 697 4.630184 GCCACCCCAAACAGATAATAAGGA 60.630 45.833 0.00 0.00 0.00 3.36
661 698 5.515106 CCACCCCAAACAGATAATAAGGAA 58.485 41.667 0.00 0.00 0.00 3.36
669 707 7.480542 CCAAACAGATAATAAGGAAACGAAACG 59.519 37.037 0.00 0.00 0.00 3.60
670 708 6.657836 ACAGATAATAAGGAAACGAAACGG 57.342 37.500 0.00 0.00 0.00 4.44
673 711 6.311935 CAGATAATAAGGAAACGAAACGGACA 59.688 38.462 0.00 0.00 0.00 4.02
675 713 5.952526 AATAAGGAAACGAAACGGACATT 57.047 34.783 0.00 0.00 0.00 2.71
677 715 3.121738 AGGAAACGAAACGGACATTCT 57.878 42.857 0.00 0.00 0.00 2.40
683 721 2.946990 ACGAAACGGACATTCTTTTGGT 59.053 40.909 0.00 0.00 0.00 3.67
686 724 4.678622 GAAACGGACATTCTTTTGGTGTT 58.321 39.130 0.00 0.00 0.00 3.32
690 728 3.123050 GGACATTCTTTTGGTGTTGTGC 58.877 45.455 0.00 0.00 0.00 4.57
701 739 0.865639 GTGTTGTGCGTTGGAGTTGC 60.866 55.000 0.00 0.00 0.00 4.17
705 743 1.302192 GTGCGTTGGAGTTGCCCTA 60.302 57.895 0.00 0.00 34.97 3.53
710 748 1.542547 CGTTGGAGTTGCCCTAAGTGT 60.543 52.381 0.00 0.00 34.97 3.55
711 749 1.880027 GTTGGAGTTGCCCTAAGTGTG 59.120 52.381 0.00 0.00 34.97 3.82
712 750 0.250727 TGGAGTTGCCCTAAGTGTGC 60.251 55.000 0.00 0.00 34.97 4.57
713 751 0.960861 GGAGTTGCCCTAAGTGTGCC 60.961 60.000 0.00 0.00 0.00 5.01
714 752 0.250727 GAGTTGCCCTAAGTGTGCCA 60.251 55.000 0.00 0.00 0.00 4.92
715 753 0.405585 AGTTGCCCTAAGTGTGCCAT 59.594 50.000 0.00 0.00 0.00 4.40
716 754 1.203050 AGTTGCCCTAAGTGTGCCATT 60.203 47.619 0.00 0.00 0.00 3.16
717 755 1.067635 GTTGCCCTAAGTGTGCCATTG 60.068 52.381 0.00 0.00 0.00 2.82
718 756 1.250154 TGCCCTAAGTGTGCCATTGC 61.250 55.000 0.00 0.00 38.26 3.56
719 757 0.967380 GCCCTAAGTGTGCCATTGCT 60.967 55.000 0.00 0.00 38.71 3.91
720 758 0.813184 CCCTAAGTGTGCCATTGCTG 59.187 55.000 0.00 0.00 38.71 4.41
721 759 1.614051 CCCTAAGTGTGCCATTGCTGA 60.614 52.381 0.00 0.00 38.71 4.26
722 760 2.161855 CCTAAGTGTGCCATTGCTGAA 58.838 47.619 0.00 0.00 38.71 3.02
723 761 2.756760 CCTAAGTGTGCCATTGCTGAAT 59.243 45.455 0.00 0.00 38.71 2.57
724 762 3.194116 CCTAAGTGTGCCATTGCTGAATT 59.806 43.478 0.00 0.00 38.71 2.17
725 763 3.756933 AAGTGTGCCATTGCTGAATTT 57.243 38.095 0.00 0.00 38.71 1.82
726 764 3.756933 AGTGTGCCATTGCTGAATTTT 57.243 38.095 0.00 0.00 38.71 1.82
727 765 3.395639 AGTGTGCCATTGCTGAATTTTG 58.604 40.909 0.00 0.00 38.71 2.44
728 766 3.132925 GTGTGCCATTGCTGAATTTTGT 58.867 40.909 0.00 0.00 38.71 2.83
729 767 3.059461 GTGTGCCATTGCTGAATTTTGTG 60.059 43.478 0.00 0.00 38.71 3.33
730 768 3.132925 GTGCCATTGCTGAATTTTGTGT 58.867 40.909 0.00 0.00 38.71 3.72
731 769 4.202192 TGTGCCATTGCTGAATTTTGTGTA 60.202 37.500 0.00 0.00 38.71 2.90
732 770 4.386652 GTGCCATTGCTGAATTTTGTGTAG 59.613 41.667 0.00 0.00 38.71 2.74
733 771 4.280425 TGCCATTGCTGAATTTTGTGTAGA 59.720 37.500 0.00 0.00 38.71 2.59
734 772 4.622740 GCCATTGCTGAATTTTGTGTAGAC 59.377 41.667 0.00 0.00 33.53 2.59
735 773 5.565439 GCCATTGCTGAATTTTGTGTAGACT 60.565 40.000 0.00 0.00 33.53 3.24
736 774 6.088824 CCATTGCTGAATTTTGTGTAGACTC 58.911 40.000 0.00 0.00 0.00 3.36
737 775 4.990543 TGCTGAATTTTGTGTAGACTCG 57.009 40.909 0.00 0.00 0.00 4.18
738 776 4.377021 TGCTGAATTTTGTGTAGACTCGT 58.623 39.130 0.00 0.00 0.00 4.18
739 777 5.534407 TGCTGAATTTTGTGTAGACTCGTA 58.466 37.500 0.00 0.00 0.00 3.43
754 792 1.089112 TCGTATTCGCGAGAGTTCCA 58.911 50.000 9.59 0.00 43.69 3.53
761 803 1.413767 CGCGAGAGTTCCATCCAACG 61.414 60.000 0.00 0.00 0.00 4.10
784 826 0.309612 CAACCGCCACACTTACAACC 59.690 55.000 0.00 0.00 0.00 3.77
786 828 0.109723 ACCGCCACACTTACAACCAT 59.890 50.000 0.00 0.00 0.00 3.55
789 831 1.606668 CGCCACACTTACAACCATGTT 59.393 47.619 0.00 0.00 41.05 2.71
791 833 2.030274 GCCACACTTACAACCATGTTCC 60.030 50.000 0.00 0.00 41.05 3.62
792 834 3.218453 CCACACTTACAACCATGTTCCA 58.782 45.455 0.00 0.00 41.05 3.53
793 835 3.004315 CCACACTTACAACCATGTTCCAC 59.996 47.826 0.00 0.00 41.05 4.02
794 836 2.875933 ACACTTACAACCATGTTCCACG 59.124 45.455 0.00 0.00 41.05 4.94
795 837 2.875933 CACTTACAACCATGTTCCACGT 59.124 45.455 0.00 0.00 41.05 4.49
796 838 2.875933 ACTTACAACCATGTTCCACGTG 59.124 45.455 9.08 9.08 41.05 4.49
864 911 2.361737 GGAAGAGCACAAGGCCCC 60.362 66.667 0.00 0.00 46.50 5.80
865 912 2.436109 GAAGAGCACAAGGCCCCA 59.564 61.111 0.00 0.00 46.50 4.96
867 914 2.417558 GAAGAGCACAAGGCCCCAGT 62.418 60.000 0.00 0.00 46.50 4.00
961 1008 0.980231 AGTCACCTGCCATCTCCTCC 60.980 60.000 0.00 0.00 0.00 4.30
970 1022 3.160047 ATCTCCTCCCCAGCAGCG 61.160 66.667 0.00 0.00 0.00 5.18
1197 1259 2.142319 GTCGTACGTATCTCTCCCTCC 58.858 57.143 16.05 0.00 0.00 4.30
1279 1365 2.728817 CCGATCGTAGGGGCTGAC 59.271 66.667 15.09 0.00 0.00 3.51
1281 1367 2.728817 GATCGTAGGGGCTGACGG 59.271 66.667 6.55 0.00 39.53 4.79
1289 1375 2.041115 GGGGCTGACGGCTTCTTTC 61.041 63.158 6.16 0.00 41.46 2.62
1295 1381 1.001406 CTGACGGCTTCTTTCTCCTGT 59.999 52.381 0.00 0.00 0.00 4.00
1296 1382 1.000955 TGACGGCTTCTTTCTCCTGTC 59.999 52.381 0.00 0.00 0.00 3.51
1412 1498 3.492311 GAGATCTCGCTGTCCGCCC 62.492 68.421 7.04 0.00 36.73 6.13
1446 1847 1.630878 TCTCTCTTGGCCCTTCCTTTC 59.369 52.381 0.00 0.00 35.26 2.62
1448 1849 0.405585 CTCTTGGCCCTTCCTTTCCA 59.594 55.000 0.00 0.00 35.26 3.53
1483 1884 0.673985 GGTGCAGTTTTCTTGGTCCC 59.326 55.000 0.00 0.00 0.00 4.46
1485 1886 0.181587 TGCAGTTTTCTTGGTCCCGA 59.818 50.000 0.00 0.00 0.00 5.14
1502 1903 2.636830 CCGAGGAGTGAGCAATCAATT 58.363 47.619 0.21 0.00 0.00 2.32
1503 1904 2.353889 CCGAGGAGTGAGCAATCAATTG 59.646 50.000 0.00 0.00 40.66 2.32
1504 1905 2.353889 CGAGGAGTGAGCAATCAATTGG 59.646 50.000 5.42 0.00 38.21 3.16
1599 2011 5.609423 AGATCATGTGCCAATTCTACTCTC 58.391 41.667 0.00 0.00 0.00 3.20
1616 2028 5.830900 ACTCTCTGAATTTTTCTTCGACG 57.169 39.130 0.00 0.00 0.00 5.12
1622 2034 6.762108 TCTGAATTTTTCTTCGACGATAAGC 58.238 36.000 0.00 0.00 0.00 3.09
1627 2039 1.477105 TCTTCGACGATAAGCATGCG 58.523 50.000 13.01 0.00 0.00 4.73
1634 2046 0.774098 CGATAAGCATGCGCATTTGC 59.226 50.000 24.80 24.80 42.27 3.68
1697 2109 3.961408 ACTTCCAGCCGAGTCTAATACAT 59.039 43.478 0.00 0.00 0.00 2.29
1740 2152 2.708216 TTTGTGCACCTTGAGAGTCA 57.292 45.000 15.69 0.00 0.00 3.41
1743 2155 0.861837 GTGCACCTTGAGAGTCAACG 59.138 55.000 5.22 0.00 32.21 4.10
1773 2187 4.160642 AGAGGGGTTTCGTGTAAAAAGT 57.839 40.909 0.00 0.00 0.00 2.66
1774 2188 3.881089 AGAGGGGTTTCGTGTAAAAAGTG 59.119 43.478 0.00 0.00 0.00 3.16
1843 2259 7.822575 GTGCAGTTAAAAATAGCACGATATC 57.177 36.000 0.00 0.00 44.84 1.63
1844 2260 7.406553 GTGCAGTTAAAAATAGCACGATATCA 58.593 34.615 3.12 0.00 44.84 2.15
1845 2261 7.584123 GTGCAGTTAAAAATAGCACGATATCAG 59.416 37.037 3.12 0.00 44.84 2.90
1846 2262 7.072030 GCAGTTAAAAATAGCACGATATCAGG 58.928 38.462 3.12 0.00 0.00 3.86
1847 2263 7.072030 CAGTTAAAAATAGCACGATATCAGGC 58.928 38.462 3.12 5.54 0.00 4.85
1848 2264 6.765989 AGTTAAAAATAGCACGATATCAGGCA 59.234 34.615 15.55 4.90 0.00 4.75
1849 2265 7.445402 AGTTAAAAATAGCACGATATCAGGCAT 59.555 33.333 15.55 6.56 0.00 4.40
1850 2266 5.618056 AAAATAGCACGATATCAGGCATG 57.382 39.130 15.55 0.00 0.00 4.06
1851 2267 2.749280 TAGCACGATATCAGGCATGG 57.251 50.000 15.55 0.00 0.00 3.66
1852 2268 0.761187 AGCACGATATCAGGCATGGT 59.239 50.000 15.55 0.00 0.00 3.55
1853 2269 0.870393 GCACGATATCAGGCATGGTG 59.130 55.000 0.00 0.00 35.81 4.17
1854 2270 1.541015 GCACGATATCAGGCATGGTGA 60.541 52.381 8.56 0.00 34.98 4.02
1855 2271 2.410939 CACGATATCAGGCATGGTGAG 58.589 52.381 0.00 0.00 34.98 3.51
1856 2272 1.270518 ACGATATCAGGCATGGTGAGC 60.271 52.381 0.00 0.00 0.00 4.26
1857 2273 1.270465 CGATATCAGGCATGGTGAGCA 60.270 52.381 0.00 0.00 0.00 4.26
1858 2274 2.807837 CGATATCAGGCATGGTGAGCAA 60.808 50.000 0.00 0.00 0.00 3.91
1859 2275 3.418995 GATATCAGGCATGGTGAGCAAT 58.581 45.455 0.00 0.00 0.00 3.56
1860 2276 1.688772 ATCAGGCATGGTGAGCAATC 58.311 50.000 0.00 0.00 0.00 2.67
1861 2277 0.622136 TCAGGCATGGTGAGCAATCT 59.378 50.000 0.00 0.00 0.00 2.40
1862 2278 1.005097 TCAGGCATGGTGAGCAATCTT 59.995 47.619 0.00 0.00 0.00 2.40
1863 2279 1.404391 CAGGCATGGTGAGCAATCTTC 59.596 52.381 0.00 0.00 0.00 2.87
1864 2280 1.005097 AGGCATGGTGAGCAATCTTCA 59.995 47.619 0.00 0.00 0.00 3.02
1865 2281 1.820519 GGCATGGTGAGCAATCTTCAA 59.179 47.619 0.00 0.00 0.00 2.69
1866 2282 2.231964 GGCATGGTGAGCAATCTTCAAA 59.768 45.455 0.00 0.00 0.00 2.69
1867 2283 3.118884 GGCATGGTGAGCAATCTTCAAAT 60.119 43.478 0.00 0.00 0.00 2.32
1868 2284 4.110482 GCATGGTGAGCAATCTTCAAATC 58.890 43.478 0.00 0.00 0.00 2.17
1869 2285 4.381185 GCATGGTGAGCAATCTTCAAATCA 60.381 41.667 0.00 0.00 0.00 2.57
1870 2286 5.681437 GCATGGTGAGCAATCTTCAAATCAT 60.681 40.000 0.00 0.00 0.00 2.45
1871 2287 5.988310 TGGTGAGCAATCTTCAAATCATT 57.012 34.783 0.00 0.00 0.00 2.57
1872 2288 5.957798 TGGTGAGCAATCTTCAAATCATTC 58.042 37.500 0.00 0.00 0.00 2.67
1873 2289 5.477637 TGGTGAGCAATCTTCAAATCATTCA 59.522 36.000 0.00 0.00 0.00 2.57
1874 2290 6.015265 TGGTGAGCAATCTTCAAATCATTCAA 60.015 34.615 0.00 0.00 0.00 2.69
1875 2291 6.869913 GGTGAGCAATCTTCAAATCATTCAAA 59.130 34.615 0.00 0.00 0.00 2.69
1876 2292 7.385752 GGTGAGCAATCTTCAAATCATTCAAAA 59.614 33.333 0.00 0.00 0.00 2.44
1877 2293 8.767085 GTGAGCAATCTTCAAATCATTCAAAAA 58.233 29.630 0.00 0.00 0.00 1.94
1970 2388 9.549509 GTAATGCAATTTTAGTACATGAACGAA 57.450 29.630 0.00 0.00 37.87 3.85
2053 2605 2.478831 GGAGGAAGCGTGAAGATGATC 58.521 52.381 0.00 0.00 0.00 2.92
2261 2863 8.974060 ACATTCTACTTTCACCTTTTCACTAA 57.026 30.769 0.00 0.00 0.00 2.24
2268 2870 6.259387 ACTTTCACCTTTTCACTAAGTTACCG 59.741 38.462 0.00 0.00 0.00 4.02
2278 2880 9.857957 TTTTCACTAAGTTACCGAAAACAATTT 57.142 25.926 9.25 0.00 32.28 1.82
2333 2973 1.134280 CAGGTTGGCACCCTCTGATAG 60.134 57.143 0.00 0.00 45.63 2.08
2416 3090 5.240844 ACAAAGAACATTTGCCTACTACCAC 59.759 40.000 0.43 0.00 32.93 4.16
2419 3093 1.065709 ACATTTGCCTACTACCACCCG 60.066 52.381 0.00 0.00 0.00 5.28
2422 3096 0.544833 TTGCCTACTACCACCCGGAA 60.545 55.000 0.73 0.00 35.59 4.30
2467 3141 6.032039 AGGCCTAATGGATGATATCAAGGTA 58.968 40.000 1.29 0.00 34.57 3.08
2468 3142 6.680197 AGGCCTAATGGATGATATCAAGGTAT 59.320 38.462 1.29 1.51 34.57 2.73
2469 3143 7.851451 AGGCCTAATGGATGATATCAAGGTATA 59.149 37.037 1.29 0.72 34.57 1.47
2470 3144 8.664079 GGCCTAATGGATGATATCAAGGTATAT 58.336 37.037 9.99 0.00 34.57 0.86
2500 3174 7.581213 AGGTGATGAACATTTTTACAAGTGA 57.419 32.000 0.00 0.00 0.00 3.41
2502 3176 8.641541 AGGTGATGAACATTTTTACAAGTGATT 58.358 29.630 0.00 0.00 0.00 2.57
2503 3177 8.702438 GGTGATGAACATTTTTACAAGTGATTG 58.298 33.333 0.00 0.00 0.00 2.67
2504 3178 9.248291 GTGATGAACATTTTTACAAGTGATTGT 57.752 29.630 0.00 0.00 38.85 2.71
2567 3311 3.138283 TGGGGATTTCTGTCTTGTTGACT 59.862 43.478 0.00 0.00 45.54 3.41
2590 3334 5.658468 TGCTTATCTGTCACTGATTCAGAG 58.342 41.667 20.33 12.46 40.70 3.35
2599 3344 5.294306 TGTCACTGATTCAGAGTTGTGTTTC 59.706 40.000 20.33 5.17 35.18 2.78
2600 3345 4.816385 TCACTGATTCAGAGTTGTGTTTCC 59.184 41.667 20.33 0.00 35.18 3.13
2606 3351 8.901016 CTGATTCAGAGTTGTGTTTCCTACACC 61.901 44.444 8.00 0.00 44.11 4.16
2614 3359 2.846193 TGTTTCCTACACCTGCAGAAC 58.154 47.619 17.39 9.45 0.00 3.01
2707 3452 5.596361 GGAACAGTGGAGAGAGATATCTCAA 59.404 44.000 29.83 10.71 46.31 3.02
2713 3458 7.945033 GTGGAGAGAGATATCTCAACAATTC 57.055 40.000 29.83 18.82 45.85 2.17
2726 3471 6.768483 TCTCAACAATTCAAGGTACAGATGA 58.232 36.000 0.00 0.00 0.00 2.92
2754 3499 3.181526 GGAGAATGGCCACTCCTTG 57.818 57.895 27.58 0.00 46.28 3.61
2772 3517 9.226606 CACTCCTTGTATTATTTTACCAGTGAA 57.773 33.333 0.00 0.00 0.00 3.18
2784 3529 2.154462 ACCAGTGAAATGCAGCTGTAC 58.846 47.619 16.64 0.00 0.00 2.90
2837 3586 1.916506 TCCCATTTTTCGACATGGCA 58.083 45.000 0.00 0.00 39.02 4.92
2897 3646 3.065925 CCAAGGCAATTCGGATCTTTCTC 59.934 47.826 0.00 0.00 0.00 2.87
2930 3679 3.220940 TCAAATTGGATGTGCACAGTCA 58.779 40.909 25.84 21.11 0.00 3.41
3013 3762 9.453572 TTTCCTATGTTAATCTATCATCCATGC 57.546 33.333 0.00 0.00 0.00 4.06
3026 3775 5.508280 TCATCCATGCATCTTCCATATCA 57.492 39.130 0.00 0.00 0.00 2.15
3027 3776 5.883180 TCATCCATGCATCTTCCATATCAA 58.117 37.500 0.00 0.00 0.00 2.57
3036 3785 6.709397 TGCATCTTCCATATCAATTCTCACTC 59.291 38.462 0.00 0.00 0.00 3.51
3042 3791 9.605275 CTTCCATATCAATTCTCACTCAAGTAA 57.395 33.333 0.00 0.00 0.00 2.24
3081 3830 8.161425 TCTTTGTACTGCCTACCTTTTCTTATT 58.839 33.333 0.00 0.00 0.00 1.40
3082 3831 8.700439 TTTGTACTGCCTACCTTTTCTTATTT 57.300 30.769 0.00 0.00 0.00 1.40
3083 3832 7.916914 TGTACTGCCTACCTTTTCTTATTTC 57.083 36.000 0.00 0.00 0.00 2.17
3084 3833 7.686434 TGTACTGCCTACCTTTTCTTATTTCT 58.314 34.615 0.00 0.00 0.00 2.52
3085 3834 7.822822 TGTACTGCCTACCTTTTCTTATTTCTC 59.177 37.037 0.00 0.00 0.00 2.87
3086 3835 6.181190 ACTGCCTACCTTTTCTTATTTCTCC 58.819 40.000 0.00 0.00 0.00 3.71
3114 3863 9.251440 TCTATTTTCTGGAGCTACTTGTTAGTA 57.749 33.333 0.00 0.00 35.78 1.82
3142 3891 4.202461 TGTTCTATGTCAAGTTGCTTCCCT 60.202 41.667 0.00 0.00 0.00 4.20
3191 3940 6.801862 GTCAGTATGTTTATTTTGTGAGCACC 59.198 38.462 0.00 0.00 37.40 5.01
3213 3962 1.071542 TGTACAGCCTGCAAGTGCTTA 59.928 47.619 4.69 0.00 38.20 3.09
3214 3963 1.464997 GTACAGCCTGCAAGTGCTTAC 59.535 52.381 4.69 5.98 38.20 2.34
3264 4020 6.536941 GCTCTTGAAGAGTAAGGTTATCCTTG 59.463 42.308 22.01 0.00 46.20 3.61
3310 4066 8.902806 TGTTATTTGTCTAGGCATCCATTTAAG 58.097 33.333 0.00 0.00 0.00 1.85
3311 4067 8.903820 GTTATTTGTCTAGGCATCCATTTAAGT 58.096 33.333 0.00 0.00 0.00 2.24
3314 4070 9.646522 ATTTGTCTAGGCATCCATTTAAGTTAT 57.353 29.630 0.00 0.00 0.00 1.89
3335 4091 8.940952 AGTTATTCTGAACATTTTCTGCTCTAC 58.059 33.333 0.00 0.00 32.18 2.59
3339 4095 6.524734 TCTGAACATTTTCTGCTCTACTCAA 58.475 36.000 0.00 0.00 32.18 3.02
3344 4100 7.750229 ACATTTTCTGCTCTACTCAATGAAA 57.250 32.000 0.00 0.00 0.00 2.69
3346 4102 6.560253 TTTTCTGCTCTACTCAATGAAACC 57.440 37.500 0.00 0.00 0.00 3.27
3347 4103 4.890158 TCTGCTCTACTCAATGAAACCA 57.110 40.909 0.00 0.00 0.00 3.67
3348 4104 5.227569 TCTGCTCTACTCAATGAAACCAA 57.772 39.130 0.00 0.00 0.00 3.67
3349 4105 5.620206 TCTGCTCTACTCAATGAAACCAAA 58.380 37.500 0.00 0.00 0.00 3.28
3350 4106 6.061441 TCTGCTCTACTCAATGAAACCAAAA 58.939 36.000 0.00 0.00 0.00 2.44
3351 4107 6.545666 TCTGCTCTACTCAATGAAACCAAAAA 59.454 34.615 0.00 0.00 0.00 1.94
3381 4137 7.832503 AAAATCAGAGAAACAAAGTTTGTGG 57.167 32.000 21.53 7.92 44.59 4.17
3382 4138 6.773976 AATCAGAGAAACAAAGTTTGTGGA 57.226 33.333 21.53 12.33 44.59 4.02
3383 4139 5.560966 TCAGAGAAACAAAGTTTGTGGAC 57.439 39.130 21.53 14.84 44.59 4.02
3384 4140 5.007034 TCAGAGAAACAAAGTTTGTGGACA 58.993 37.500 21.53 0.66 44.59 4.02
3385 4141 5.095490 CAGAGAAACAAAGTTTGTGGACAC 58.905 41.667 21.53 13.49 44.59 3.67
3386 4142 5.010282 AGAGAAACAAAGTTTGTGGACACT 58.990 37.500 21.53 15.17 44.59 3.55
3387 4143 6.093495 CAGAGAAACAAAGTTTGTGGACACTA 59.907 38.462 21.53 0.00 44.59 2.74
3388 4144 6.657541 AGAGAAACAAAGTTTGTGGACACTAA 59.342 34.615 21.53 0.00 44.59 2.24
3389 4145 6.852664 AGAAACAAAGTTTGTGGACACTAAG 58.147 36.000 21.53 0.00 44.59 2.18
3390 4146 6.657541 AGAAACAAAGTTTGTGGACACTAAGA 59.342 34.615 21.53 0.00 44.59 2.10
3391 4147 5.813080 ACAAAGTTTGTGGACACTAAGAC 57.187 39.130 20.26 0.00 43.48 3.01
3392 4148 5.497474 ACAAAGTTTGTGGACACTAAGACT 58.503 37.500 20.26 0.52 43.48 3.24
3393 4149 6.646267 ACAAAGTTTGTGGACACTAAGACTA 58.354 36.000 20.26 0.00 43.48 2.59
3394 4150 7.280356 ACAAAGTTTGTGGACACTAAGACTAT 58.720 34.615 20.26 0.00 43.48 2.12
3395 4151 8.426489 ACAAAGTTTGTGGACACTAAGACTATA 58.574 33.333 20.26 0.00 43.48 1.31
3396 4152 9.268268 CAAAGTTTGTGGACACTAAGACTATAA 57.732 33.333 7.48 0.00 0.00 0.98
3397 4153 9.490379 AAAGTTTGTGGACACTAAGACTATAAG 57.510 33.333 3.91 0.00 0.00 1.73
3398 4154 7.097834 AGTTTGTGGACACTAAGACTATAAGC 58.902 38.462 3.91 0.00 0.00 3.09
3399 4155 6.852420 TTGTGGACACTAAGACTATAAGCT 57.148 37.500 3.91 0.00 0.00 3.74
3400 4156 7.949690 TTGTGGACACTAAGACTATAAGCTA 57.050 36.000 3.91 0.00 0.00 3.32
3401 4157 7.330900 TGTGGACACTAAGACTATAAGCTAC 57.669 40.000 3.91 0.00 0.00 3.58
3402 4158 6.888088 TGTGGACACTAAGACTATAAGCTACA 59.112 38.462 3.91 0.00 0.00 2.74
3403 4159 7.395206 TGTGGACACTAAGACTATAAGCTACAA 59.605 37.037 3.91 0.00 0.00 2.41
3404 4160 8.248945 GTGGACACTAAGACTATAAGCTACAAA 58.751 37.037 0.00 0.00 0.00 2.83
3405 4161 8.978472 TGGACACTAAGACTATAAGCTACAAAT 58.022 33.333 0.00 0.00 0.00 2.32
3406 4162 9.465985 GGACACTAAGACTATAAGCTACAAATC 57.534 37.037 0.00 0.00 0.00 2.17
3419 4175 7.617041 AAGCTACAAATCTTTATCTGGTGTC 57.383 36.000 0.00 0.00 0.00 3.67
3420 4176 6.951971 AGCTACAAATCTTTATCTGGTGTCT 58.048 36.000 0.00 0.00 0.00 3.41
3421 4177 8.079211 AGCTACAAATCTTTATCTGGTGTCTA 57.921 34.615 0.00 0.00 0.00 2.59
3422 4178 7.982354 AGCTACAAATCTTTATCTGGTGTCTAC 59.018 37.037 0.00 0.00 0.00 2.59
3423 4179 7.982354 GCTACAAATCTTTATCTGGTGTCTACT 59.018 37.037 0.00 0.00 0.00 2.57
3424 4180 9.522804 CTACAAATCTTTATCTGGTGTCTACTC 57.477 37.037 0.00 0.00 0.00 2.59
3425 4181 7.907389 ACAAATCTTTATCTGGTGTCTACTCA 58.093 34.615 0.00 0.00 0.00 3.41
3426 4182 8.375506 ACAAATCTTTATCTGGTGTCTACTCAA 58.624 33.333 0.00 0.00 0.00 3.02
3427 4183 9.388506 CAAATCTTTATCTGGTGTCTACTCAAT 57.611 33.333 0.00 0.00 0.00 2.57
3428 4184 8.954950 AATCTTTATCTGGTGTCTACTCAATG 57.045 34.615 0.00 0.00 0.00 2.82
3429 4185 7.718334 TCTTTATCTGGTGTCTACTCAATGA 57.282 36.000 0.00 0.00 0.00 2.57
3430 4186 8.134202 TCTTTATCTGGTGTCTACTCAATGAA 57.866 34.615 0.00 0.00 0.00 2.57
3431 4187 8.593679 TCTTTATCTGGTGTCTACTCAATGAAA 58.406 33.333 0.00 0.00 0.00 2.69
3432 4188 8.547967 TTTATCTGGTGTCTACTCAATGAAAC 57.452 34.615 0.00 0.00 0.00 2.78
3433 4189 4.894784 TCTGGTGTCTACTCAATGAAACC 58.105 43.478 0.00 0.00 40.18 3.27
3434 4190 4.346709 TCTGGTGTCTACTCAATGAAACCA 59.653 41.667 5.11 5.11 45.38 3.67
3435 4191 5.042463 TGGTGTCTACTCAATGAAACCAA 57.958 39.130 2.84 0.00 44.82 3.67
3436 4192 5.630121 TGGTGTCTACTCAATGAAACCAAT 58.370 37.500 2.84 0.00 44.82 3.16
3437 4193 6.068010 TGGTGTCTACTCAATGAAACCAATT 58.932 36.000 2.84 0.00 44.82 2.32
3438 4194 6.549364 TGGTGTCTACTCAATGAAACCAATTT 59.451 34.615 2.84 0.00 44.82 1.82
3439 4195 7.069331 TGGTGTCTACTCAATGAAACCAATTTT 59.931 33.333 2.84 0.00 44.82 1.82
3440 4196 7.926018 GGTGTCTACTCAATGAAACCAATTTTT 59.074 33.333 0.00 0.00 39.69 1.94
3464 4220 7.650834 TTTTTGAGAGAAACAAAGTTTGTGG 57.349 32.000 21.53 0.00 44.59 4.17
3465 4221 6.582677 TTTGAGAGAAACAAAGTTTGTGGA 57.417 33.333 21.53 0.00 44.59 4.02
3466 4222 5.560966 TGAGAGAAACAAAGTTTGTGGAC 57.439 39.130 21.53 14.84 44.59 4.02
3467 4223 5.007034 TGAGAGAAACAAAGTTTGTGGACA 58.993 37.500 21.53 12.73 44.59 4.02
3468 4224 5.106317 TGAGAGAAACAAAGTTTGTGGACAC 60.106 40.000 21.53 13.49 44.59 3.67
3469 4225 5.010282 AGAGAAACAAAGTTTGTGGACACT 58.990 37.500 21.53 15.17 44.59 3.55
3484 4241 7.330900 TGTGGACACTAAGACTATAAGCTAC 57.669 40.000 3.91 0.00 0.00 3.58
3487 4244 8.248945 GTGGACACTAAGACTATAAGCTACAAA 58.751 37.037 0.00 0.00 0.00 2.83
3489 4246 9.465985 GGACACTAAGACTATAAGCTACAAATC 57.534 37.037 0.00 0.00 0.00 2.17
3511 4268 0.750850 TATCTGTTGCCTAGGCCGTC 59.249 55.000 30.81 19.84 41.09 4.79
3577 4334 4.091365 CGACGATGAAATACAAGCAGTTGA 59.909 41.667 0.00 0.00 37.10 3.18
3590 4347 1.467734 GCAGTTGATGTGAAGAGCCAG 59.532 52.381 0.00 0.00 0.00 4.85
3630 4387 1.280710 CTATGTACAGCAACCCACCCA 59.719 52.381 0.33 0.00 0.00 4.51
3635 4392 0.827507 ACAGCAACCCACCCATTCAC 60.828 55.000 0.00 0.00 0.00 3.18
3710 4467 4.142038 GGCTGAAAGAGGTCAAGGTAAAA 58.858 43.478 0.00 0.00 34.07 1.52
3731 4488 5.997384 AACTACAACGTCCTTCTTCCTAT 57.003 39.130 0.00 0.00 0.00 2.57
3754 4512 5.001232 TGCCTGACTACCATTGAAGTAAAC 58.999 41.667 0.00 0.00 0.00 2.01
3783 4541 9.636789 AATTCCTGAGTCATTTGATAATCATGA 57.363 29.630 0.00 0.00 0.00 3.07
3884 4642 3.731274 CGAAAAGCACTTAAGGAGAGC 57.269 47.619 7.53 5.49 41.64 4.09
4004 4762 2.027192 ACTGCCCACATGTAACTGGTAG 60.027 50.000 14.92 14.92 35.27 3.18
4040 4847 2.896685 TCTTGGCCAACATAAAAGGGTG 59.103 45.455 16.05 0.00 0.00 4.61
4092 4899 1.267806 GCATTTGGGTAGGATCATGCG 59.732 52.381 0.00 0.00 0.00 4.73
4101 4908 1.070445 GGATCATGCGGGGAGAGTG 59.930 63.158 0.00 0.00 0.00 3.51
4102 4909 1.596477 GATCATGCGGGGAGAGTGC 60.596 63.158 0.00 0.00 0.00 4.40
4104 4911 2.599645 ATCATGCGGGGAGAGTGCAC 62.600 60.000 9.40 9.40 42.11 4.57
4106 4913 2.596851 ATGCGGGGAGAGTGCACTT 61.597 57.895 22.65 11.02 42.11 3.16
4107 4914 2.032681 GCGGGGAGAGTGCACTTT 59.967 61.111 22.65 16.47 0.00 2.66
4108 4915 1.295423 GCGGGGAGAGTGCACTTTA 59.705 57.895 22.65 0.00 0.00 1.85
4138 4945 4.638304 TGCTTTGGTCTCTGTACCTAAAC 58.362 43.478 0.00 0.00 40.44 2.01
4143 4950 4.342359 TGGTCTCTGTACCTAAACTCTCC 58.658 47.826 0.00 0.00 40.44 3.71
4146 4953 4.641541 GTCTCTGTACCTAAACTCTCCCTC 59.358 50.000 0.00 0.00 0.00 4.30
4230 5041 6.765915 AGGAAGTTTCTTAGAATGGAATGC 57.234 37.500 0.00 0.00 0.00 3.56
4236 5047 8.499403 AGTTTCTTAGAATGGAATGCTAGTTC 57.501 34.615 0.00 0.00 35.40 3.01
4295 5106 2.270434 ATCTGGAGGCCCTGTCTTTA 57.730 50.000 0.00 0.00 33.58 1.85
4298 5109 0.984230 TGGAGGCCCTGTCTTTAGTG 59.016 55.000 0.00 0.00 0.00 2.74
4300 5111 0.393132 GAGGCCCTGTCTTTAGTGGC 60.393 60.000 0.00 0.00 41.42 5.01
4301 5112 0.842467 AGGCCCTGTCTTTAGTGGCT 60.842 55.000 0.00 0.00 41.84 4.75
4302 5113 0.393132 GGCCCTGTCTTTAGTGGCTC 60.393 60.000 0.00 0.00 41.84 4.70
4312 5123 0.970937 TTAGTGGCTCCCCTCAGACG 60.971 60.000 0.00 0.00 0.00 4.18
4417 5234 6.405508 CCTTCTAAGATGTTTTGATGCTGCAT 60.406 38.462 16.20 16.20 0.00 3.96
4422 5239 7.766219 AAGATGTTTTGATGCTGCATATTTC 57.234 32.000 16.23 4.46 0.00 2.17
4423 5240 7.108841 AGATGTTTTGATGCTGCATATTTCT 57.891 32.000 16.23 8.20 0.00 2.52
4444 5281 2.376109 TGGGTTCAAACAGCGGTTTTA 58.624 42.857 12.50 1.99 44.63 1.52
4455 5292 9.099454 TCAAACAGCGGTTTTAACAATAATTTT 57.901 25.926 12.50 0.00 44.63 1.82
4485 5322 8.736751 AATTTTACGTTATGCTTTGTAAGTGG 57.263 30.769 0.00 0.00 0.00 4.00
4492 5329 6.404293 CGTTATGCTTTGTAAGTGGCCTTATT 60.404 38.462 3.32 0.00 35.67 1.40
4503 5340 9.169592 TGTAAGTGGCCTTATTTACTTTCATAC 57.830 33.333 3.32 0.00 35.67 2.39
4507 5344 8.052748 AGTGGCCTTATTTACTTTCATACATGA 58.947 33.333 3.32 0.00 34.44 3.07
4508 5345 8.345565 GTGGCCTTATTTACTTTCATACATGAG 58.654 37.037 3.32 0.00 38.19 2.90
4525 5362 1.599071 TGAGTTGCTGAGAGTTTTGCG 59.401 47.619 0.00 0.00 0.00 4.85
4548 5385 1.312371 CCATTCCATCGGCGGTTGTT 61.312 55.000 7.21 0.00 0.00 2.83
4549 5386 0.525761 CATTCCATCGGCGGTTGTTT 59.474 50.000 7.21 0.00 0.00 2.83
4550 5387 1.067915 CATTCCATCGGCGGTTGTTTT 60.068 47.619 7.21 0.00 0.00 2.43
4551 5388 0.312416 TTCCATCGGCGGTTGTTTTG 59.688 50.000 7.21 0.00 0.00 2.44
4552 5389 1.732683 CCATCGGCGGTTGTTTTGC 60.733 57.895 7.21 0.00 0.00 3.68
4553 5390 1.285641 CATCGGCGGTTGTTTTGCT 59.714 52.632 7.21 0.00 0.00 3.91
4608 5479 3.745975 CACCTGAACAAGTTGATCGCTTA 59.254 43.478 10.54 0.00 0.00 3.09
4620 5491 8.702438 CAAGTTGATCGCTTAACAAATGAATTT 58.298 29.630 0.00 0.00 0.00 1.82
4681 5552 9.301153 ACTTGTAATTGCTTAACAGAAAGTTTG 57.699 29.630 0.00 0.00 41.64 2.93
4719 5598 7.991460 TCTGAATACATCTCTCTGCATTTCATT 59.009 33.333 0.00 0.00 0.00 2.57
4721 5600 6.879276 ATACATCTCTCTGCATTTCATTGG 57.121 37.500 0.00 0.00 0.00 3.16
4728 5607 6.149973 TCTCTCTGCATTTCATTGGTTACTTG 59.850 38.462 0.00 0.00 0.00 3.16
4729 5608 5.769662 TCTCTGCATTTCATTGGTTACTTGT 59.230 36.000 0.00 0.00 0.00 3.16
4730 5609 5.771469 TCTGCATTTCATTGGTTACTTGTG 58.229 37.500 0.00 0.00 0.00 3.33
4734 5613 5.336372 GCATTTCATTGGTTACTTGTGCCTA 60.336 40.000 0.00 0.00 0.00 3.93
4744 5623 7.607250 TGGTTACTTGTGCCTAATTTTATTGG 58.393 34.615 0.00 0.00 0.00 3.16
4746 5625 7.544217 GGTTACTTGTGCCTAATTTTATTGGTG 59.456 37.037 0.00 0.00 0.00 4.17
4789 5669 3.002862 GTGTAACAACAGGAAATGTCGCA 59.997 43.478 0.00 0.00 43.00 5.10
4823 5703 3.738282 CGCTATTCATGAGGTCACTAAGC 59.262 47.826 0.00 0.00 0.00 3.09
4827 5707 4.574674 TTCATGAGGTCACTAAGCCAAT 57.425 40.909 0.00 0.00 0.00 3.16
4843 5723 3.024547 GCCAATTTAAGACCCCTTCCTC 58.975 50.000 0.00 0.00 33.94 3.71
4844 5724 3.632333 CCAATTTAAGACCCCTTCCTCC 58.368 50.000 0.00 0.00 33.94 4.30
4845 5725 3.627492 CCAATTTAAGACCCCTTCCTCCC 60.627 52.174 0.00 0.00 33.94 4.30
4846 5726 2.755019 TTTAAGACCCCTTCCTCCCT 57.245 50.000 0.00 0.00 33.94 4.20
4887 5767 3.749226 AGAGGAGCCTTTCAACTTCAAG 58.251 45.455 0.00 0.00 0.00 3.02
4912 5792 7.984617 AGTTGCAGTTTGCTTTTAATTTCCTTA 59.015 29.630 2.48 0.00 45.31 2.69
4932 5812 8.307582 TCCTTAAACCTTTTATGTTCCAACAA 57.692 30.769 0.00 0.00 43.03 2.83
5018 5898 2.525368 TCATCGGAGACACAGAAAGGA 58.475 47.619 0.00 0.00 42.51 3.36
5019 5899 2.897326 TCATCGGAGACACAGAAAGGAA 59.103 45.455 0.00 0.00 42.51 3.36
5020 5900 2.814280 TCGGAGACACAGAAAGGAAC 57.186 50.000 0.00 0.00 0.00 3.62
5021 5901 2.036387 TCGGAGACACAGAAAGGAACA 58.964 47.619 0.00 0.00 0.00 3.18
5022 5902 2.135933 CGGAGACACAGAAAGGAACAC 58.864 52.381 0.00 0.00 0.00 3.32
5023 5903 2.224066 CGGAGACACAGAAAGGAACACT 60.224 50.000 0.00 0.00 0.00 3.55
5024 5904 3.741388 CGGAGACACAGAAAGGAACACTT 60.741 47.826 0.00 0.00 42.52 3.16
5026 5906 9.306591 ATCGGAGACACAGAAAGGAACACTTTA 62.307 40.741 0.00 0.00 45.37 1.85
5058 5938 9.877178 AAGAACTAAACTGATCCTGTATTACAG 57.123 33.333 15.58 15.58 45.53 2.74
5059 5939 9.036980 AGAACTAAACTGATCCTGTATTACAGT 57.963 33.333 19.76 5.08 44.50 3.55
5061 5941 9.436957 AACTAAACTGATCCTGTATTACAGTTG 57.563 33.333 19.76 8.08 46.37 3.16
5062 5942 6.743575 AAACTGATCCTGTATTACAGTTGC 57.256 37.500 19.76 10.32 46.37 4.17
5063 5943 5.420725 ACTGATCCTGTATTACAGTTGCA 57.579 39.130 19.76 13.50 44.50 4.08
5064 5944 5.423015 ACTGATCCTGTATTACAGTTGCAG 58.577 41.667 19.76 21.25 44.50 4.41
5093 5973 4.437390 GCCCTAACACTGAAAATGTCATCG 60.437 45.833 0.00 0.00 35.07 3.84
5099 5979 9.318041 CTAACACTGAAAATGTCATCGTTTAAG 57.682 33.333 0.00 0.00 35.07 1.85
5120 6000 4.522114 AGAAAAATTAGGAGGAGCTGAGC 58.478 43.478 0.00 0.00 0.00 4.26
5134 6014 0.457443 CTGAGCTCCTGTGACGCATA 59.543 55.000 12.15 0.00 0.00 3.14
5145 6025 4.277257 TGTGACGCATATGAAGAAATGC 57.723 40.909 6.97 0.00 44.02 3.56
5182 6062 6.203915 CCAAGTGCACAGTGTTTGTTATAGTA 59.796 38.462 21.04 0.00 38.16 1.82
5185 6065 8.029642 AGTGCACAGTGTTTGTTATAGTATTC 57.970 34.615 21.04 0.00 38.16 1.75
5247 6127 2.478894 CTGGTGTCCAACATAACACGTC 59.521 50.000 0.00 0.00 45.31 4.34
5312 6192 5.711506 ACTGTCAATGCCACAAAATGAGATA 59.288 36.000 0.00 0.00 0.00 1.98
5318 6198 3.441222 TGCCACAAAATGAGATACTGCAG 59.559 43.478 13.48 13.48 0.00 4.41
5325 6205 4.333913 AATGAGATACTGCAGGCTAGTG 57.666 45.455 19.93 0.00 0.00 2.74
5326 6206 1.410517 TGAGATACTGCAGGCTAGTGC 59.589 52.381 19.93 1.60 44.27 4.40
5343 6223 8.840321 AGGCTAGTGCATAATTATGTAACAAAG 58.160 33.333 23.14 20.39 41.91 2.77
5421 6782 5.677091 GCGCAATATATTGATGATGGGGTTC 60.677 44.000 26.22 5.64 40.14 3.62
5423 6784 5.415701 GCAATATATTGATGATGGGGTTCGT 59.584 40.000 26.22 0.00 40.14 3.85
5424 6785 6.071952 GCAATATATTGATGATGGGGTTCGTT 60.072 38.462 26.22 0.00 40.14 3.85
5425 6786 7.523709 GCAATATATTGATGATGGGGTTCGTTT 60.524 37.037 26.22 0.00 40.14 3.60
5426 6787 8.359642 CAATATATTGATGATGGGGTTCGTTTT 58.640 33.333 18.92 0.00 40.14 2.43
5446 6807 6.128254 CGTTTTATGGAAGGTTCTCCTCTTTC 60.128 42.308 0.00 0.00 44.35 2.62
5447 6808 6.704056 TTTATGGAAGGTTCTCCTCTTTCT 57.296 37.500 0.00 0.00 44.35 2.52
5448 6809 6.704056 TTATGGAAGGTTCTCCTCTTTCTT 57.296 37.500 0.00 0.00 44.35 2.52
5451 6812 5.377478 TGGAAGGTTCTCCTCTTTCTTTTC 58.623 41.667 0.00 0.00 44.35 2.29
5454 6815 6.016693 GGAAGGTTCTCCTCTTTCTTTTCTTG 60.017 42.308 0.00 0.00 44.35 3.02
5455 6816 6.253946 AGGTTCTCCTCTTTCTTTTCTTGA 57.746 37.500 0.00 0.00 40.58 3.02
5456 6817 6.058833 AGGTTCTCCTCTTTCTTTTCTTGAC 58.941 40.000 0.00 0.00 40.58 3.18
5458 6819 6.238511 GGTTCTCCTCTTTCTTTTCTTGACAC 60.239 42.308 0.00 0.00 0.00 3.67
5459 6820 6.240549 TCTCCTCTTTCTTTTCTTGACACT 57.759 37.500 0.00 0.00 0.00 3.55
5460 6821 6.051717 TCTCCTCTTTCTTTTCTTGACACTG 58.948 40.000 0.00 0.00 0.00 3.66
5461 6822 5.126067 TCCTCTTTCTTTTCTTGACACTGG 58.874 41.667 0.00 0.00 0.00 4.00
5462 6823 4.884164 CCTCTTTCTTTTCTTGACACTGGT 59.116 41.667 0.00 0.00 0.00 4.00
5463 6824 6.055588 CCTCTTTCTTTTCTTGACACTGGTA 58.944 40.000 0.00 0.00 0.00 3.25
5464 6825 6.203723 CCTCTTTCTTTTCTTGACACTGGTAG 59.796 42.308 0.00 0.00 0.00 3.18
5465 6826 6.055588 TCTTTCTTTTCTTGACACTGGTAGG 58.944 40.000 0.00 0.00 0.00 3.18
5467 6828 5.367945 TCTTTTCTTGACACTGGTAGGTT 57.632 39.130 0.00 0.00 0.00 3.50
5468 6829 5.365619 TCTTTTCTTGACACTGGTAGGTTC 58.634 41.667 0.00 0.00 0.00 3.62
5469 6830 5.130477 TCTTTTCTTGACACTGGTAGGTTCT 59.870 40.000 0.00 0.00 0.00 3.01
5470 6831 4.602340 TTCTTGACACTGGTAGGTTCTC 57.398 45.455 0.00 0.00 0.00 2.87
5471 6832 2.897969 TCTTGACACTGGTAGGTTCTCC 59.102 50.000 0.00 0.00 0.00 3.71
5484 6845 6.214615 TGGTAGGTTCTCCTTTGACATATGAA 59.785 38.462 10.38 0.00 42.12 2.57
5486 6847 7.610305 GGTAGGTTCTCCTTTGACATATGAAAA 59.390 37.037 10.38 8.68 42.12 2.29
5504 6865 6.474819 TGAAAATTTGCAGCATCAGAAATG 57.525 33.333 0.00 0.00 0.00 2.32
5513 6874 4.320714 GCAGCATCAGAAATGAAGTGACAA 60.321 41.667 0.00 0.00 0.00 3.18
5544 7011 0.603707 TGCTCACTTGTGGCTGCTAC 60.604 55.000 9.40 9.40 0.00 3.58
5619 7086 4.845580 CAGGCCACTAGCTGCGGG 62.846 72.222 5.01 0.00 43.05 6.13
5631 7111 0.318699 GCTGCGGGTTGTCCTTTTTC 60.319 55.000 0.00 0.00 0.00 2.29
5632 7112 1.318576 CTGCGGGTTGTCCTTTTTCT 58.681 50.000 0.00 0.00 0.00 2.52
5634 7114 1.679153 TGCGGGTTGTCCTTTTTCTTC 59.321 47.619 0.00 0.00 0.00 2.87
5637 7117 3.550233 GCGGGTTGTCCTTTTTCTTCTTC 60.550 47.826 0.00 0.00 0.00 2.87
5638 7118 3.883489 CGGGTTGTCCTTTTTCTTCTTCT 59.117 43.478 0.00 0.00 0.00 2.85
5639 7119 4.338400 CGGGTTGTCCTTTTTCTTCTTCTT 59.662 41.667 0.00 0.00 0.00 2.52
5642 7122 6.757010 GGGTTGTCCTTTTTCTTCTTCTTTTC 59.243 38.462 0.00 0.00 0.00 2.29
5644 7124 8.035394 GGTTGTCCTTTTTCTTCTTCTTTTCTT 58.965 33.333 0.00 0.00 0.00 2.52
5647 7127 9.462606 TGTCCTTTTTCTTCTTCTTTTCTTACT 57.537 29.630 0.00 0.00 0.00 2.24
5759 7243 7.494298 TCTTTTTATTTTGGTGCTTCTTGTTCC 59.506 33.333 0.00 0.00 0.00 3.62
5762 7246 4.385358 TTTTGGTGCTTCTTGTTCCTTC 57.615 40.909 0.00 0.00 0.00 3.46
5770 7254 6.863645 GGTGCTTCTTGTTCCTTCTATTTTTC 59.136 38.462 0.00 0.00 0.00 2.29
5774 7258 8.972349 GCTTCTTGTTCCTTCTATTTTTCTTTG 58.028 33.333 0.00 0.00 0.00 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 2.952978 TGGCCTCGATCTCTAACTTCTC 59.047 50.000 3.32 0.00 0.00 2.87
111 113 1.860641 TTGGTGGCCTCGATCTCTAA 58.139 50.000 3.32 0.00 0.00 2.10
207 209 0.179094 TGACAGTTCGCGAACCAAGT 60.179 50.000 40.01 34.52 42.06 3.16
222 224 1.066858 GGCGAACATCTCCTTCTGACA 60.067 52.381 0.00 0.00 0.00 3.58
224 226 0.537188 GGGCGAACATCTCCTTCTGA 59.463 55.000 0.00 0.00 0.00 3.27
449 459 3.758554 GGTCATCATAAGTTTGGTGCTGT 59.241 43.478 0.00 0.00 0.00 4.40
451 461 4.032960 TGGTCATCATAAGTTTGGTGCT 57.967 40.909 0.00 0.00 0.00 4.40
464 475 2.159099 GCGTCCTACAGAATGGTCATCA 60.159 50.000 0.00 0.00 43.62 3.07
466 478 2.111384 AGCGTCCTACAGAATGGTCAT 58.889 47.619 0.00 0.00 43.62 3.06
500 513 2.874701 GTTCACGCTAGATCATGCCATT 59.125 45.455 0.00 0.00 0.00 3.16
501 514 2.487934 GTTCACGCTAGATCATGCCAT 58.512 47.619 0.00 0.00 0.00 4.40
563 588 0.794229 GTCCGATGTGCATGCAAACG 60.794 55.000 24.58 24.85 0.00 3.60
577 602 3.214123 CGGCCGTATCTGGTCCGA 61.214 66.667 19.50 0.00 45.51 4.55
599 624 3.319972 CCTGAATTTGTGGATATGCTGGG 59.680 47.826 0.00 0.00 0.00 4.45
600 625 3.243636 GCCTGAATTTGTGGATATGCTGG 60.244 47.826 0.00 0.00 0.00 4.85
601 626 3.549423 CGCCTGAATTTGTGGATATGCTG 60.549 47.826 0.00 0.00 0.00 4.41
602 627 2.620115 CGCCTGAATTTGTGGATATGCT 59.380 45.455 0.00 0.00 0.00 3.79
605 641 3.214328 GTCCGCCTGAATTTGTGGATAT 58.786 45.455 8.51 0.00 42.67 1.63
606 642 2.026729 TGTCCGCCTGAATTTGTGGATA 60.027 45.455 8.51 4.52 42.67 2.59
631 667 0.831288 CTGTTTGGGGTGGCAATGGA 60.831 55.000 0.00 0.00 0.00 3.41
645 682 7.388500 TCCGTTTCGTTTCCTTATTATCTGTTT 59.612 33.333 0.00 0.00 0.00 2.83
648 685 6.311935 TGTCCGTTTCGTTTCCTTATTATCTG 59.688 38.462 0.00 0.00 0.00 2.90
649 686 6.400568 TGTCCGTTTCGTTTCCTTATTATCT 58.599 36.000 0.00 0.00 0.00 1.98
651 688 7.551617 AGAATGTCCGTTTCGTTTCCTTATTAT 59.448 33.333 0.00 0.00 0.00 1.28
653 690 5.704053 AGAATGTCCGTTTCGTTTCCTTATT 59.296 36.000 0.00 0.00 0.00 1.40
655 692 4.634199 AGAATGTCCGTTTCGTTTCCTTA 58.366 39.130 0.00 0.00 0.00 2.69
658 695 3.891056 AAGAATGTCCGTTTCGTTTCC 57.109 42.857 0.00 0.00 0.00 3.13
660 697 4.142337 ACCAAAAGAATGTCCGTTTCGTTT 60.142 37.500 0.00 0.00 30.25 3.60
661 698 3.379057 ACCAAAAGAATGTCCGTTTCGTT 59.621 39.130 0.00 0.00 0.00 3.85
669 707 3.123050 GCACAACACCAAAAGAATGTCC 58.877 45.455 0.00 0.00 0.00 4.02
670 708 2.788786 CGCACAACACCAAAAGAATGTC 59.211 45.455 0.00 0.00 0.00 3.06
673 711 3.186119 CAACGCACAACACCAAAAGAAT 58.814 40.909 0.00 0.00 0.00 2.40
675 713 1.135257 CCAACGCACAACACCAAAAGA 60.135 47.619 0.00 0.00 0.00 2.52
677 715 0.888619 TCCAACGCACAACACCAAAA 59.111 45.000 0.00 0.00 0.00 2.44
683 721 1.431440 GCAACTCCAACGCACAACA 59.569 52.632 0.00 0.00 0.00 3.33
686 724 2.046009 TAGGGCAACTCCAACGCACA 62.046 55.000 0.00 0.00 36.21 4.57
690 728 1.156736 CACTTAGGGCAACTCCAACG 58.843 55.000 0.00 0.00 36.21 4.10
710 748 3.472283 ACACAAAATTCAGCAATGGCA 57.528 38.095 0.00 0.00 44.61 4.92
711 749 4.622740 GTCTACACAAAATTCAGCAATGGC 59.377 41.667 0.00 0.00 41.61 4.40
712 750 6.017400 AGTCTACACAAAATTCAGCAATGG 57.983 37.500 0.00 0.00 0.00 3.16
713 751 5.791974 CGAGTCTACACAAAATTCAGCAATG 59.208 40.000 0.00 0.00 0.00 2.82
714 752 5.470098 ACGAGTCTACACAAAATTCAGCAAT 59.530 36.000 0.00 0.00 0.00 3.56
715 753 4.814234 ACGAGTCTACACAAAATTCAGCAA 59.186 37.500 0.00 0.00 0.00 3.91
716 754 4.377021 ACGAGTCTACACAAAATTCAGCA 58.623 39.130 0.00 0.00 0.00 4.41
717 755 4.992381 ACGAGTCTACACAAAATTCAGC 57.008 40.909 0.00 0.00 0.00 4.26
718 756 7.384124 CGAATACGAGTCTACACAAAATTCAG 58.616 38.462 0.00 0.00 42.66 3.02
719 757 6.183360 GCGAATACGAGTCTACACAAAATTCA 60.183 38.462 0.00 0.00 42.66 2.57
720 758 6.176453 GCGAATACGAGTCTACACAAAATTC 58.824 40.000 0.00 0.00 42.66 2.17
721 759 5.220154 CGCGAATACGAGTCTACACAAAATT 60.220 40.000 0.00 0.00 42.66 1.82
722 760 4.264614 CGCGAATACGAGTCTACACAAAAT 59.735 41.667 0.00 0.00 42.66 1.82
723 761 3.605056 CGCGAATACGAGTCTACACAAAA 59.395 43.478 0.00 0.00 42.66 2.44
724 762 3.120234 TCGCGAATACGAGTCTACACAAA 60.120 43.478 6.20 0.00 42.66 2.83
725 763 2.416202 TCGCGAATACGAGTCTACACAA 59.584 45.455 6.20 0.00 42.66 3.33
726 764 2.001872 TCGCGAATACGAGTCTACACA 58.998 47.619 6.20 0.00 42.66 3.72
727 765 2.726555 TCGCGAATACGAGTCTACAC 57.273 50.000 6.20 0.00 42.66 2.90
735 773 1.089112 TGGAACTCTCGCGAATACGA 58.911 50.000 11.33 2.46 42.66 3.43
736 774 2.044860 GATGGAACTCTCGCGAATACG 58.955 52.381 11.33 0.00 42.93 3.06
737 775 2.223735 TGGATGGAACTCTCGCGAATAC 60.224 50.000 11.33 0.00 0.00 1.89
738 776 2.028876 TGGATGGAACTCTCGCGAATA 58.971 47.619 11.33 0.00 0.00 1.75
739 777 0.824109 TGGATGGAACTCTCGCGAAT 59.176 50.000 11.33 0.00 0.00 3.34
761 803 0.589708 GTAAGTGTGGCGGTTGTTCC 59.410 55.000 0.00 0.00 0.00 3.62
817 859 4.191544 GCTGTGCCAGTACTTCAATGATA 58.808 43.478 0.00 0.00 33.43 2.15
838 883 0.884704 TGTGCTCTTCCGGAGTTTGC 60.885 55.000 3.34 8.97 43.62 3.68
846 893 2.747855 GGGCCTTGTGCTCTTCCG 60.748 66.667 0.84 0.00 37.53 4.30
847 894 2.361737 GGGGCCTTGTGCTCTTCC 60.362 66.667 0.84 0.00 41.66 3.46
864 911 2.348666 GCCGCTATGTTGTTCTGTACTG 59.651 50.000 0.00 0.00 0.00 2.74
865 912 2.028476 TGCCGCTATGTTGTTCTGTACT 60.028 45.455 0.00 0.00 0.00 2.73
867 914 2.343101 GTGCCGCTATGTTGTTCTGTA 58.657 47.619 0.00 0.00 0.00 2.74
932 979 1.768684 GCAGGTGACTTGGGTCCTGA 61.769 60.000 13.26 0.00 41.47 3.86
961 1008 3.741476 GAGTTTGCCGCTGCTGGG 61.741 66.667 0.70 0.25 38.71 4.45
994 1056 2.202932 AGACATCGCCATGCCGTC 60.203 61.111 0.00 0.00 32.57 4.79
1186 1248 1.503347 GAAGAGGAGGGAGGGAGAGAT 59.497 57.143 0.00 0.00 0.00 2.75
1197 1259 1.153289 CATGCGGGTGAAGAGGAGG 60.153 63.158 0.00 0.00 0.00 4.30
1222 1308 2.551270 GCGAGAAACACCGCTGTG 59.449 61.111 6.73 6.73 46.96 3.66
1242 1328 4.514569 CCCGTTTTGATCGCGGCG 62.515 66.667 17.70 17.70 43.70 6.46
1269 1355 1.198759 AAAGAAGCCGTCAGCCCCTA 61.199 55.000 0.00 0.00 45.47 3.53
1279 1365 1.355066 GCGACAGGAGAAAGAAGCCG 61.355 60.000 0.00 0.00 0.00 5.52
1281 1367 1.960994 GCGCGACAGGAGAAAGAAGC 61.961 60.000 12.10 0.00 0.00 3.86
1412 1498 0.179113 GAGAGAGCAGAGGAAAGGCG 60.179 60.000 0.00 0.00 0.00 5.52
1414 1500 2.093553 CCAAGAGAGAGCAGAGGAAAGG 60.094 54.545 0.00 0.00 0.00 3.11
1415 1501 2.677613 GCCAAGAGAGAGCAGAGGAAAG 60.678 54.545 0.00 0.00 0.00 2.62
1425 1511 1.284313 AAGGAAGGGCCAAGAGAGAG 58.716 55.000 6.18 0.00 40.02 3.20
1446 1847 1.548269 ACCCACAACCGCATTAAATGG 59.452 47.619 0.00 0.00 0.00 3.16
1448 1849 1.067213 GCACCCACAACCGCATTAAAT 60.067 47.619 0.00 0.00 0.00 1.40
1483 1884 2.353889 CCAATTGATTGCTCACTCCTCG 59.646 50.000 7.12 0.00 36.48 4.63
1485 1886 3.087031 CACCAATTGATTGCTCACTCCT 58.913 45.455 7.12 0.00 36.48 3.69
1502 1903 3.009026 CCACGTCAATTCATCATCACCA 58.991 45.455 0.00 0.00 0.00 4.17
1503 1904 3.063997 GTCCACGTCAATTCATCATCACC 59.936 47.826 0.00 0.00 0.00 4.02
1504 1905 3.242091 CGTCCACGTCAATTCATCATCAC 60.242 47.826 0.00 0.00 34.11 3.06
1599 2011 6.534059 TGCTTATCGTCGAAGAAAAATTCAG 58.466 36.000 4.85 0.00 39.69 3.02
1634 2046 8.282592 TCAATAATTTCTTGATAGCGAAATCCG 58.717 33.333 0.00 0.00 38.51 4.18
1635 2047 9.387123 GTCAATAATTTCTTGATAGCGAAATCC 57.613 33.333 6.46 0.00 38.51 3.01
1697 2109 8.519799 AAAGTTAGACTGAAACTTCCAAATGA 57.480 30.769 4.25 0.00 44.35 2.57
1814 2230 3.571828 TGCTATTTTTAACTGCACAGCCA 59.428 39.130 0.00 0.00 0.00 4.75
1843 2259 1.404391 GAAGATTGCTCACCATGCCTG 59.596 52.381 0.00 0.00 0.00 4.85
1844 2260 1.005097 TGAAGATTGCTCACCATGCCT 59.995 47.619 0.00 0.00 0.00 4.75
1845 2261 1.466856 TGAAGATTGCTCACCATGCC 58.533 50.000 0.00 0.00 0.00 4.40
1846 2262 3.581024 TTTGAAGATTGCTCACCATGC 57.419 42.857 0.00 0.00 0.00 4.06
1847 2263 5.319140 TGATTTGAAGATTGCTCACCATG 57.681 39.130 0.00 0.00 0.00 3.66
1848 2264 6.153851 TGAATGATTTGAAGATTGCTCACCAT 59.846 34.615 0.00 0.00 0.00 3.55
1849 2265 5.477637 TGAATGATTTGAAGATTGCTCACCA 59.522 36.000 0.00 0.00 0.00 4.17
1850 2266 5.957798 TGAATGATTTGAAGATTGCTCACC 58.042 37.500 0.00 0.00 0.00 4.02
1851 2267 7.878477 TTTGAATGATTTGAAGATTGCTCAC 57.122 32.000 0.00 0.00 0.00 3.51
1852 2268 8.890124 TTTTTGAATGATTTGAAGATTGCTCA 57.110 26.923 0.00 0.00 0.00 4.26
2248 2800 6.607735 TTTCGGTAACTTAGTGAAAAGGTG 57.392 37.500 0.00 0.00 0.00 4.00
2261 2863 6.993902 TGGTCTCTAAATTGTTTTCGGTAACT 59.006 34.615 3.00 0.00 0.00 2.24
2278 2880 8.289618 CGAAGAACATTTGAAATTTGGTCTCTA 58.710 33.333 0.00 0.00 36.43 2.43
2314 2954 1.207791 CTATCAGAGGGTGCCAACCT 58.792 55.000 0.00 0.00 46.70 3.50
2315 2955 0.912486 ACTATCAGAGGGTGCCAACC 59.088 55.000 0.00 0.00 46.81 3.77
2333 2973 7.884816 TGAACAAGTTCATACAGTTAGCTAC 57.115 36.000 11.34 0.00 43.90 3.58
2416 3090 0.179000 CCAGTCCTCTTGATTCCGGG 59.821 60.000 0.00 0.00 0.00 5.73
2419 3093 3.990959 AAGTCCAGTCCTCTTGATTCC 57.009 47.619 0.00 0.00 0.00 3.01
2422 3096 2.373169 TGCAAAGTCCAGTCCTCTTGAT 59.627 45.455 0.00 0.00 0.00 2.57
2472 3146 9.295825 ACTTGTAAAAATGTTCATCACCTATGA 57.704 29.630 0.00 0.00 43.03 2.15
2473 3147 9.345517 CACTTGTAAAAATGTTCATCACCTATG 57.654 33.333 0.00 0.00 36.88 2.23
2474 3148 9.295825 TCACTTGTAAAAATGTTCATCACCTAT 57.704 29.630 0.00 0.00 0.00 2.57
2475 3149 8.684386 TCACTTGTAAAAATGTTCATCACCTA 57.316 30.769 0.00 0.00 0.00 3.08
2476 3150 7.581213 TCACTTGTAAAAATGTTCATCACCT 57.419 32.000 0.00 0.00 0.00 4.00
2477 3151 8.702438 CAATCACTTGTAAAAATGTTCATCACC 58.298 33.333 0.00 0.00 0.00 4.02
2478 3152 9.248291 ACAATCACTTGTAAAAATGTTCATCAC 57.752 29.630 0.00 0.00 43.77 3.06
2500 3174 4.832266 TGCCAAATCACAGAAACCTACAAT 59.168 37.500 0.00 0.00 0.00 2.71
2502 3176 3.568007 GTGCCAAATCACAGAAACCTACA 59.432 43.478 0.00 0.00 36.97 2.74
2503 3177 3.568007 TGTGCCAAATCACAGAAACCTAC 59.432 43.478 0.00 0.00 41.57 3.18
2504 3178 3.826524 TGTGCCAAATCACAGAAACCTA 58.173 40.909 0.00 0.00 41.57 3.08
2505 3179 2.665165 TGTGCCAAATCACAGAAACCT 58.335 42.857 0.00 0.00 41.57 3.50
2567 3311 5.186603 ACTCTGAATCAGTGACAGATAAGCA 59.813 40.000 17.86 0.00 39.42 3.91
2599 3344 3.876300 GCGTTCTGCAGGTGTAGG 58.124 61.111 15.13 4.36 45.45 3.18
2614 3359 1.219393 GAAGGAACCCTCTGGAGCG 59.781 63.158 0.00 0.00 30.89 5.03
2647 3392 1.615116 CCAGTGGGATTGTGAGCACAT 60.615 52.381 0.00 0.00 37.51 3.21
2689 3434 7.495901 TGAATTGTTGAGATATCTCTCTCCAC 58.504 38.462 28.51 18.20 46.84 4.02
2707 3452 6.061441 TGTTGTCATCTGTACCTTGAATTGT 58.939 36.000 0.00 0.00 0.00 2.71
2710 3455 7.765695 ATTTGTTGTCATCTGTACCTTGAAT 57.234 32.000 0.00 0.00 0.00 2.57
2713 3458 6.016360 TCCAATTTGTTGTCATCTGTACCTTG 60.016 38.462 0.00 0.00 0.00 3.61
2726 3471 2.971330 TGGCCATTCTCCAATTTGTTGT 59.029 40.909 0.00 0.00 0.00 3.32
2754 3499 8.190784 AGCTGCATTTCACTGGTAAAATAATAC 58.809 33.333 1.02 0.00 0.00 1.89
2772 3517 4.141959 ACCAAACAAAAGTACAGCTGCATT 60.142 37.500 15.27 2.94 0.00 3.56
2784 3529 8.485976 TTCACCTGAAAAATACCAAACAAAAG 57.514 30.769 0.00 0.00 0.00 2.27
2837 3586 2.042979 ACCACTGGCAAATCCTTGGTAT 59.957 45.455 0.00 0.00 44.89 2.73
2897 3646 5.516996 CATCCAATTTGATGTCCATCTTCG 58.483 41.667 10.63 0.00 37.85 3.79
2939 3688 3.182887 TGGCCATAAAGTCCCATGTTT 57.817 42.857 0.00 0.00 0.00 2.83
3008 3757 6.433093 TGAGAATTGATATGGAAGATGCATGG 59.567 38.462 2.46 0.00 29.08 3.66
3009 3758 7.175119 AGTGAGAATTGATATGGAAGATGCATG 59.825 37.037 2.46 0.00 29.08 4.06
3010 3759 7.232188 AGTGAGAATTGATATGGAAGATGCAT 58.768 34.615 0.00 0.00 31.80 3.96
3011 3760 6.598503 AGTGAGAATTGATATGGAAGATGCA 58.401 36.000 0.00 0.00 0.00 3.96
3012 3761 6.709397 TGAGTGAGAATTGATATGGAAGATGC 59.291 38.462 0.00 0.00 0.00 3.91
3013 3762 8.672823 TTGAGTGAGAATTGATATGGAAGATG 57.327 34.615 0.00 0.00 0.00 2.90
3042 3791 8.267894 AGGCAGTACAAAGACATTGATACTTAT 58.732 33.333 0.00 0.00 41.85 1.73
3043 3792 7.620880 AGGCAGTACAAAGACATTGATACTTA 58.379 34.615 0.00 0.00 41.85 2.24
3044 3793 6.476378 AGGCAGTACAAAGACATTGATACTT 58.524 36.000 0.00 0.00 41.85 2.24
3046 3795 6.258068 GGTAGGCAGTACAAAGACATTGATAC 59.742 42.308 0.00 0.00 41.85 2.24
3047 3796 6.156256 AGGTAGGCAGTACAAAGACATTGATA 59.844 38.462 0.00 0.00 41.85 2.15
3048 3797 5.045578 AGGTAGGCAGTACAAAGACATTGAT 60.046 40.000 0.00 0.00 41.85 2.57
3049 3798 4.286032 AGGTAGGCAGTACAAAGACATTGA 59.714 41.667 0.00 0.00 41.85 2.57
3050 3799 4.579869 AGGTAGGCAGTACAAAGACATTG 58.420 43.478 0.00 0.00 44.95 2.82
3052 3801 4.910458 AAGGTAGGCAGTACAAAGACAT 57.090 40.909 0.00 0.00 32.62 3.06
3053 3802 4.699925 AAAGGTAGGCAGTACAAAGACA 57.300 40.909 0.00 0.00 32.62 3.41
3054 3803 5.306394 AGAAAAGGTAGGCAGTACAAAGAC 58.694 41.667 0.00 0.00 32.62 3.01
3055 3804 5.562298 AGAAAAGGTAGGCAGTACAAAGA 57.438 39.130 0.00 0.00 32.62 2.52
3056 3805 7.923414 ATAAGAAAAGGTAGGCAGTACAAAG 57.077 36.000 0.00 0.00 32.62 2.77
3057 3806 8.700439 AAATAAGAAAAGGTAGGCAGTACAAA 57.300 30.769 0.00 0.00 32.62 2.83
3081 3830 6.670027 AGTAGCTCCAGAAAATAGAAGGAGAA 59.330 38.462 10.73 0.00 46.89 2.87
3082 3831 6.198639 AGTAGCTCCAGAAAATAGAAGGAGA 58.801 40.000 10.73 0.00 46.89 3.71
3083 3832 6.478512 AGTAGCTCCAGAAAATAGAAGGAG 57.521 41.667 0.00 0.00 46.71 3.69
3084 3833 6.213600 ACAAGTAGCTCCAGAAAATAGAAGGA 59.786 38.462 0.00 0.00 0.00 3.36
3085 3834 6.410540 ACAAGTAGCTCCAGAAAATAGAAGG 58.589 40.000 0.00 0.00 0.00 3.46
3086 3835 7.913674 AACAAGTAGCTCCAGAAAATAGAAG 57.086 36.000 0.00 0.00 0.00 2.85
3099 3848 8.535690 AGAACACAAATACTAACAAGTAGCTC 57.464 34.615 0.00 0.00 32.45 4.09
3114 3863 6.639632 AGCAACTTGACATAGAACACAAAT 57.360 33.333 0.00 0.00 0.00 2.32
3142 3891 9.383519 GACATCCTCAATTCAGTAGAAATTACA 57.616 33.333 0.00 0.00 37.29 2.41
3182 3931 1.300620 GCTGTACACGGTGCTCACA 60.301 57.895 8.30 9.06 0.00 3.58
3191 3940 1.862123 CACTTGCAGGCTGTACACG 59.138 57.895 17.16 6.71 0.00 4.49
3283 4039 6.949352 AATGGATGCCTAGACAAATAACAG 57.051 37.500 0.00 0.00 0.00 3.16
3284 4040 8.815565 TTAAATGGATGCCTAGACAAATAACA 57.184 30.769 0.00 0.00 0.00 2.41
3285 4041 8.903820 ACTTAAATGGATGCCTAGACAAATAAC 58.096 33.333 0.00 0.00 0.00 1.89
3288 4044 7.961326 AACTTAAATGGATGCCTAGACAAAT 57.039 32.000 0.00 0.00 0.00 2.32
3289 4045 9.474313 AATAACTTAAATGGATGCCTAGACAAA 57.526 29.630 0.00 0.00 0.00 2.83
3290 4046 9.120538 GAATAACTTAAATGGATGCCTAGACAA 57.879 33.333 0.00 0.00 0.00 3.18
3291 4047 8.494433 AGAATAACTTAAATGGATGCCTAGACA 58.506 33.333 0.00 0.00 0.00 3.41
3292 4048 8.778358 CAGAATAACTTAAATGGATGCCTAGAC 58.222 37.037 0.00 0.00 0.00 2.59
3293 4049 8.713971 TCAGAATAACTTAAATGGATGCCTAGA 58.286 33.333 0.00 0.00 0.00 2.43
3294 4050 8.908786 TCAGAATAACTTAAATGGATGCCTAG 57.091 34.615 0.00 0.00 0.00 3.02
3295 4051 9.120538 GTTCAGAATAACTTAAATGGATGCCTA 57.879 33.333 0.00 0.00 0.00 3.93
3310 4066 8.940952 AGTAGAGCAGAAAATGTTCAGAATAAC 58.059 33.333 0.00 0.00 41.33 1.89
3311 4067 9.155975 GAGTAGAGCAGAAAATGTTCAGAATAA 57.844 33.333 0.00 0.00 41.33 1.40
3314 4070 6.524734 TGAGTAGAGCAGAAAATGTTCAGAA 58.475 36.000 0.00 0.00 41.33 3.02
3328 4084 6.707440 TTTTTGGTTTCATTGAGTAGAGCA 57.293 33.333 0.00 0.00 0.00 4.26
3393 4149 9.331282 GACACCAGATAAAGATTTGTAGCTTAT 57.669 33.333 0.00 0.00 27.98 1.73
3394 4150 8.540388 AGACACCAGATAAAGATTTGTAGCTTA 58.460 33.333 0.00 0.00 27.98 3.09
3395 4151 7.398024 AGACACCAGATAAAGATTTGTAGCTT 58.602 34.615 0.00 0.00 0.00 3.74
3396 4152 6.951971 AGACACCAGATAAAGATTTGTAGCT 58.048 36.000 0.00 0.00 0.00 3.32
3397 4153 7.982354 AGTAGACACCAGATAAAGATTTGTAGC 59.018 37.037 0.00 0.00 0.00 3.58
3398 4154 9.522804 GAGTAGACACCAGATAAAGATTTGTAG 57.477 37.037 0.00 0.00 0.00 2.74
3399 4155 9.031537 TGAGTAGACACCAGATAAAGATTTGTA 57.968 33.333 0.00 0.00 0.00 2.41
3400 4156 7.907389 TGAGTAGACACCAGATAAAGATTTGT 58.093 34.615 0.00 0.00 0.00 2.83
3401 4157 8.777865 TTGAGTAGACACCAGATAAAGATTTG 57.222 34.615 0.00 0.00 0.00 2.32
3402 4158 9.388506 CATTGAGTAGACACCAGATAAAGATTT 57.611 33.333 0.00 0.00 0.00 2.17
3403 4159 8.762645 TCATTGAGTAGACACCAGATAAAGATT 58.237 33.333 0.00 0.00 0.00 2.40
3404 4160 8.311395 TCATTGAGTAGACACCAGATAAAGAT 57.689 34.615 0.00 0.00 0.00 2.40
3405 4161 7.718334 TCATTGAGTAGACACCAGATAAAGA 57.282 36.000 0.00 0.00 0.00 2.52
3406 4162 8.660373 GTTTCATTGAGTAGACACCAGATAAAG 58.340 37.037 0.00 0.00 0.00 1.85
3407 4163 7.606456 GGTTTCATTGAGTAGACACCAGATAAA 59.394 37.037 0.00 0.00 35.27 1.40
3408 4164 7.103641 GGTTTCATTGAGTAGACACCAGATAA 58.896 38.462 0.00 0.00 35.27 1.75
3409 4165 6.212589 TGGTTTCATTGAGTAGACACCAGATA 59.787 38.462 0.00 0.00 39.09 1.98
3410 4166 5.013079 TGGTTTCATTGAGTAGACACCAGAT 59.987 40.000 0.00 0.00 39.09 2.90
3411 4167 4.346709 TGGTTTCATTGAGTAGACACCAGA 59.653 41.667 0.00 0.00 39.09 3.86
3412 4168 4.641396 TGGTTTCATTGAGTAGACACCAG 58.359 43.478 0.00 0.00 39.09 4.00
3413 4169 4.698201 TGGTTTCATTGAGTAGACACCA 57.302 40.909 0.00 0.00 41.04 4.17
3414 4170 6.575162 AATTGGTTTCATTGAGTAGACACC 57.425 37.500 0.00 0.00 35.63 4.16
3415 4171 8.871686 AAAAATTGGTTTCATTGAGTAGACAC 57.128 30.769 0.00 0.00 0.00 3.67
3440 4196 7.383843 GTCCACAAACTTTGTTTCTCTCAAAAA 59.616 33.333 4.30 0.00 43.23 1.94
3441 4197 6.866248 GTCCACAAACTTTGTTTCTCTCAAAA 59.134 34.615 4.30 0.00 43.23 2.44
3442 4198 6.015856 TGTCCACAAACTTTGTTTCTCTCAAA 60.016 34.615 4.30 0.00 43.23 2.69
3443 4199 5.475220 TGTCCACAAACTTTGTTTCTCTCAA 59.525 36.000 4.30 0.00 43.23 3.02
3444 4200 5.007034 TGTCCACAAACTTTGTTTCTCTCA 58.993 37.500 4.30 0.00 43.23 3.27
3445 4201 5.123979 AGTGTCCACAAACTTTGTTTCTCTC 59.876 40.000 4.30 0.00 43.23 3.20
3446 4202 5.010282 AGTGTCCACAAACTTTGTTTCTCT 58.990 37.500 4.30 2.93 43.23 3.10
3447 4203 5.310720 AGTGTCCACAAACTTTGTTTCTC 57.689 39.130 4.30 0.99 43.23 2.87
3448 4204 6.657541 TCTTAGTGTCCACAAACTTTGTTTCT 59.342 34.615 4.30 2.84 43.23 2.52
3449 4205 6.745907 GTCTTAGTGTCCACAAACTTTGTTTC 59.254 38.462 4.30 0.19 43.23 2.78
3450 4206 6.433093 AGTCTTAGTGTCCACAAACTTTGTTT 59.567 34.615 4.30 0.00 43.23 2.83
3451 4207 5.944007 AGTCTTAGTGTCCACAAACTTTGTT 59.056 36.000 4.30 0.00 43.23 2.83
3452 4208 5.497474 AGTCTTAGTGTCCACAAACTTTGT 58.503 37.500 1.00 1.00 46.75 2.83
3453 4209 7.730364 ATAGTCTTAGTGTCCACAAACTTTG 57.270 36.000 0.00 0.00 0.00 2.77
3454 4210 9.490379 CTTATAGTCTTAGTGTCCACAAACTTT 57.510 33.333 0.00 0.00 0.00 2.66
3455 4211 7.603024 GCTTATAGTCTTAGTGTCCACAAACTT 59.397 37.037 0.00 0.00 0.00 2.66
3456 4212 7.038941 AGCTTATAGTCTTAGTGTCCACAAACT 60.039 37.037 0.00 0.84 0.00 2.66
3457 4213 7.097834 AGCTTATAGTCTTAGTGTCCACAAAC 58.902 38.462 0.00 0.00 0.00 2.93
3458 4214 7.241042 AGCTTATAGTCTTAGTGTCCACAAA 57.759 36.000 0.00 0.00 0.00 2.83
3459 4215 6.852420 AGCTTATAGTCTTAGTGTCCACAA 57.148 37.500 0.00 0.00 0.00 3.33
3460 4216 6.888088 TGTAGCTTATAGTCTTAGTGTCCACA 59.112 38.462 0.00 0.00 0.00 4.17
3461 4217 7.330900 TGTAGCTTATAGTCTTAGTGTCCAC 57.669 40.000 0.00 0.00 0.00 4.02
3462 4218 7.949690 TTGTAGCTTATAGTCTTAGTGTCCA 57.050 36.000 0.00 0.00 0.00 4.02
3463 4219 9.465985 GATTTGTAGCTTATAGTCTTAGTGTCC 57.534 37.037 0.00 0.00 0.00 4.02
3484 4241 5.221126 GGCCTAGGCAACAGATAAAGATTTG 60.221 44.000 34.09 0.00 44.11 2.32
3487 4244 3.495100 CGGCCTAGGCAACAGATAAAGAT 60.495 47.826 34.09 0.00 44.11 2.40
3489 4246 2.213499 CGGCCTAGGCAACAGATAAAG 58.787 52.381 34.09 8.53 44.11 1.85
3492 4249 0.750850 GACGGCCTAGGCAACAGATA 59.249 55.000 34.09 0.00 44.11 1.98
3495 4252 2.509336 CGACGGCCTAGGCAACAG 60.509 66.667 34.09 22.83 44.11 3.16
3511 4268 8.553459 AATGTTAAAATATAGGAGATCAGGCG 57.447 34.615 0.00 0.00 0.00 5.52
3554 4311 4.091365 TCAACTGCTTGTATTTCATCGTCG 59.909 41.667 0.00 0.00 0.00 5.12
3577 4334 4.067896 CTGTTGTAACTGGCTCTTCACAT 58.932 43.478 0.00 0.00 0.00 3.21
3590 4347 3.412386 AGGTCTGGCAATCTGTTGTAAC 58.588 45.455 0.00 0.00 37.65 2.50
3630 4387 1.448985 ACAATTAGTGCGCCGTGAAT 58.551 45.000 4.18 0.00 0.00 2.57
3635 4392 0.519519 TGGAAACAATTAGTGCGCCG 59.480 50.000 4.18 0.00 37.44 6.46
3695 4452 5.163374 ACGTTGTAGTTTTACCTTGACCTCT 60.163 40.000 0.00 0.00 0.00 3.69
3710 4467 4.381718 GCATAGGAAGAAGGACGTTGTAGT 60.382 45.833 0.00 0.00 0.00 2.73
3731 4488 4.901197 TTACTTCAATGGTAGTCAGGCA 57.099 40.909 0.00 0.00 0.00 4.75
3783 4541 5.867903 TCACAATCAAACCCATCAGTTTT 57.132 34.783 0.00 0.00 37.87 2.43
3817 4575 7.122650 CCATACCCTGAGACAATAAACAAATGT 59.877 37.037 0.00 0.00 0.00 2.71
3884 4642 2.763448 TGGTGAACCCAACTTTTCAAGG 59.237 45.455 0.00 0.00 41.50 3.61
3960 4718 2.234414 AGTTGCCACAGCCCAAATTATG 59.766 45.455 0.00 0.00 38.69 1.90
4004 4762 5.424757 TGGCCAAGATGTTGTACAGTATAC 58.575 41.667 0.61 0.00 30.95 1.47
4040 4847 2.048316 CACCCAAATTGCGGCCAC 60.048 61.111 2.24 0.00 0.00 5.01
4064 4871 1.895131 CCTACCCAAATGCTTTGCACT 59.105 47.619 0.00 0.00 43.04 4.40
4077 4884 2.146724 CCCCGCATGATCCTACCCA 61.147 63.158 0.00 0.00 0.00 4.51
4138 4945 5.443283 TCCATTGATCAATTTGAGGGAGAG 58.557 41.667 18.41 3.44 0.00 3.20
4143 4950 6.046593 CCACATTCCATTGATCAATTTGAGG 58.953 40.000 18.41 15.76 0.00 3.86
4146 4953 5.179533 TGCCACATTCCATTGATCAATTTG 58.820 37.500 18.41 14.76 0.00 2.32
4201 5008 7.922382 TCCATTCTAAGAAACTTCCTTCTGAT 58.078 34.615 0.00 0.00 35.79 2.90
4203 5010 7.986085 TTCCATTCTAAGAAACTTCCTTCTG 57.014 36.000 0.00 0.00 35.79 3.02
4204 5011 7.121907 GCATTCCATTCTAAGAAACTTCCTTCT 59.878 37.037 0.00 0.00 37.24 2.85
4205 5012 7.121907 AGCATTCCATTCTAAGAAACTTCCTTC 59.878 37.037 0.00 0.00 0.00 3.46
4207 5014 6.488715 AGCATTCCATTCTAAGAAACTTCCT 58.511 36.000 0.00 0.00 0.00 3.36
4209 5016 8.499403 ACTAGCATTCCATTCTAAGAAACTTC 57.501 34.615 0.00 0.00 0.00 3.01
4211 5018 8.325046 AGAACTAGCATTCCATTCTAAGAAACT 58.675 33.333 0.00 0.00 0.00 2.66
4212 5019 8.499403 AGAACTAGCATTCCATTCTAAGAAAC 57.501 34.615 0.00 0.00 0.00 2.78
4214 5021 7.554118 CCAAGAACTAGCATTCCATTCTAAGAA 59.446 37.037 0.00 0.00 0.00 2.52
4215 5022 7.050377 CCAAGAACTAGCATTCCATTCTAAGA 58.950 38.462 0.00 0.00 0.00 2.10
4295 5106 2.151307 TACGTCTGAGGGGAGCCACT 62.151 60.000 0.00 0.00 0.00 4.00
4298 5109 1.340568 GTTATACGTCTGAGGGGAGCC 59.659 57.143 0.00 0.00 0.00 4.70
4300 5111 2.946785 AGGTTATACGTCTGAGGGGAG 58.053 52.381 0.00 0.00 0.00 4.30
4301 5112 3.028850 CAAGGTTATACGTCTGAGGGGA 58.971 50.000 0.00 0.00 0.00 4.81
4302 5113 2.102588 CCAAGGTTATACGTCTGAGGGG 59.897 54.545 0.00 0.00 0.00 4.79
4352 5169 3.570550 TCCCACAATAAAACAGAAACCCG 59.429 43.478 0.00 0.00 0.00 5.28
4355 5172 7.169140 GTGATGTTCCCACAATAAAACAGAAAC 59.831 37.037 0.00 0.00 36.16 2.78
4368 5185 3.118075 TCAAAGTGAGTGATGTTCCCACA 60.118 43.478 0.00 0.00 37.01 4.17
4417 5234 3.254657 CCGCTGTTTGAACCCAAGAAATA 59.745 43.478 0.00 0.00 33.23 1.40
4422 5239 0.744281 AACCGCTGTTTGAACCCAAG 59.256 50.000 0.00 0.00 33.23 3.61
4423 5240 1.187087 AAACCGCTGTTTGAACCCAA 58.813 45.000 5.37 0.00 42.97 4.12
4455 5292 9.894783 TTACAAAGCATAACGTAAAATTTAGCA 57.105 25.926 0.00 0.00 0.00 3.49
4468 5305 4.783764 AAGGCCACTTACAAAGCATAAC 57.216 40.909 5.01 0.00 34.49 1.89
4485 5322 9.722056 CAACTCATGTATGAAAGTAAATAAGGC 57.278 33.333 0.00 0.00 36.18 4.35
4492 5329 7.386059 TCTCAGCAACTCATGTATGAAAGTAA 58.614 34.615 0.00 0.00 36.18 2.24
4503 5340 3.562505 GCAAAACTCTCAGCAACTCATG 58.437 45.455 0.00 0.00 0.00 3.07
4507 5344 1.953559 TCGCAAAACTCTCAGCAACT 58.046 45.000 0.00 0.00 0.00 3.16
4508 5345 2.578495 CATCGCAAAACTCTCAGCAAC 58.422 47.619 0.00 0.00 0.00 4.17
4548 5385 4.870123 AAACATGCCAATCTGTAGCAAA 57.130 36.364 0.00 0.00 40.46 3.68
4549 5386 4.558178 CAAAACATGCCAATCTGTAGCAA 58.442 39.130 0.00 0.00 40.46 3.91
4550 5387 4.177165 CAAAACATGCCAATCTGTAGCA 57.823 40.909 0.00 0.00 41.50 3.49
4620 5491 6.156519 GCCATTACGAGTCATGTATATGTGA 58.843 40.000 0.00 0.00 35.73 3.58
4686 5557 7.930325 TGCAGAGAGATGTATTCAGAAATAAGG 59.070 37.037 0.00 0.00 0.00 2.69
4719 5598 7.233757 ACCAATAAAATTAGGCACAAGTAACCA 59.766 33.333 0.00 0.00 0.00 3.67
4721 5600 8.085909 ACACCAATAAAATTAGGCACAAGTAAC 58.914 33.333 0.00 0.00 0.00 2.50
4728 5607 6.697395 AGGAAACACCAATAAAATTAGGCAC 58.303 36.000 0.00 0.00 42.04 5.01
4729 5608 6.723977 AGAGGAAACACCAATAAAATTAGGCA 59.276 34.615 0.00 0.00 42.04 4.75
4730 5609 7.170393 AGAGGAAACACCAATAAAATTAGGC 57.830 36.000 0.00 0.00 42.04 3.93
4734 5613 7.154656 GCTGAAGAGGAAACACCAATAAAATT 58.845 34.615 0.00 0.00 42.04 1.82
4744 5623 1.200948 GCCATGCTGAAGAGGAAACAC 59.799 52.381 0.00 0.00 0.00 3.32
4746 5625 1.831580 AGCCATGCTGAAGAGGAAAC 58.168 50.000 0.00 0.00 37.57 2.78
4789 5669 6.372659 CCTCATGAATAGCGTTAGCCAAATAT 59.627 38.462 0.00 0.00 46.67 1.28
4823 5703 3.627492 GGGAGGAAGGGGTCTTAAATTGG 60.627 52.174 0.00 0.00 32.52 3.16
4827 5707 2.558974 GAGGGAGGAAGGGGTCTTAAA 58.441 52.381 0.00 0.00 32.52 1.52
4843 5723 2.220653 TTCTCAAAATGGCAGGAGGG 57.779 50.000 0.00 0.00 0.00 4.30
4844 5724 5.653769 TCTTATTTCTCAAAATGGCAGGAGG 59.346 40.000 0.00 0.00 35.84 4.30
4845 5725 6.183360 CCTCTTATTTCTCAAAATGGCAGGAG 60.183 42.308 0.00 0.00 35.84 3.69
4846 5726 5.653769 CCTCTTATTTCTCAAAATGGCAGGA 59.346 40.000 0.00 0.00 35.84 3.86
4887 5767 8.608317 TTAAGGAAATTAAAAGCAAACTGCAAC 58.392 29.630 0.89 0.00 36.78 4.17
4912 5792 7.826744 ACAACATTGTTGGAACATAAAAGGTTT 59.173 29.630 28.10 3.91 38.47 3.27
5032 5912 9.877178 CTGTAATACAGGATCAGTTTAGTTCTT 57.123 33.333 12.38 0.00 42.35 2.52
5062 5942 1.833630 TCAGTGTTAGGGCATCCTCTG 59.166 52.381 0.00 0.00 43.66 3.35
5063 5943 2.254152 TCAGTGTTAGGGCATCCTCT 57.746 50.000 0.00 0.00 43.66 3.69
5064 5944 3.350219 TTTCAGTGTTAGGGCATCCTC 57.650 47.619 0.00 0.00 43.66 3.71
5093 5973 8.336801 TCAGCTCCTCCTAATTTTTCTTAAAC 57.663 34.615 0.00 0.00 0.00 2.01
5099 5979 4.522114 AGCTCAGCTCCTCCTAATTTTTC 58.478 43.478 0.00 0.00 30.62 2.29
5120 6000 3.443099 TCTTCATATGCGTCACAGGAG 57.557 47.619 0.00 0.00 0.00 3.69
5185 6065 8.070171 GTGGATGTGATAGTTCCAATTATTTCG 58.930 37.037 0.00 0.00 41.05 3.46
5318 6198 8.836413 TCTTTGTTACATAATTATGCACTAGCC 58.164 33.333 22.66 7.01 41.13 3.93
5374 6254 8.000435 GCGCTCTTTAAATTTGATCATATTTGC 59.000 33.333 25.43 19.89 0.00 3.68
5398 6759 5.447683 CGAACCCCATCATCAATATATTGCG 60.448 44.000 18.89 12.86 37.68 4.85
5446 6807 5.368989 AGAACCTACCAGTGTCAAGAAAAG 58.631 41.667 0.00 0.00 0.00 2.27
5447 6808 5.365619 GAGAACCTACCAGTGTCAAGAAAA 58.634 41.667 0.00 0.00 0.00 2.29
5448 6809 4.202326 GGAGAACCTACCAGTGTCAAGAAA 60.202 45.833 0.00 0.00 0.00 2.52
5451 6812 2.900546 AGGAGAACCTACCAGTGTCAAG 59.099 50.000 0.00 0.00 45.83 3.02
5464 6825 9.143631 CAAATTTTCATATGTCAAAGGAGAACC 57.856 33.333 1.90 0.00 0.00 3.62
5465 6826 8.650714 GCAAATTTTCATATGTCAAAGGAGAAC 58.349 33.333 1.90 0.00 0.00 3.01
5467 6828 7.894708 TGCAAATTTTCATATGTCAAAGGAGA 58.105 30.769 1.90 0.00 0.00 3.71
5468 6829 7.201496 GCTGCAAATTTTCATATGTCAAAGGAG 60.201 37.037 1.90 4.47 0.00 3.69
5469 6830 6.591062 GCTGCAAATTTTCATATGTCAAAGGA 59.409 34.615 1.90 0.00 0.00 3.36
5470 6831 6.369340 TGCTGCAAATTTTCATATGTCAAAGG 59.631 34.615 0.00 0.43 0.00 3.11
5471 6832 7.354025 TGCTGCAAATTTTCATATGTCAAAG 57.646 32.000 0.00 0.00 0.00 2.77
5472 6833 7.603024 TGATGCTGCAAATTTTCATATGTCAAA 59.397 29.630 6.36 4.17 0.00 2.69
5484 6845 6.147164 CACTTCATTTCTGATGCTGCAAATTT 59.853 34.615 6.36 0.00 31.40 1.82
5486 6847 5.047590 TCACTTCATTTCTGATGCTGCAAAT 60.048 36.000 6.36 0.00 31.40 2.32
5513 6874 6.507023 CCACAAGTGAGCAGAATAAGTTTTT 58.493 36.000 0.94 0.00 0.00 1.94
5544 7011 2.987149 CGATAACCCGTAGCTTAGCATG 59.013 50.000 7.07 0.00 0.00 4.06
5619 7086 8.988064 AAGAAAAGAAGAAGAAAAAGGACAAC 57.012 30.769 0.00 0.00 0.00 3.32
5733 7217 7.494298 GGAACAAGAAGCACCAAAATAAAAAGA 59.506 33.333 0.00 0.00 0.00 2.52
5802 7286 7.507733 TTCATGGCTTTTTGCATAAATGTTT 57.492 28.000 2.68 0.00 45.15 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.