Multiple sequence alignment - TraesCS7A01G353400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G353400 chr7A 100.000 2863 0 0 1 2863 517415791 517412929 0.000000e+00 5288.0
1 TraesCS7A01G353400 chr7A 82.943 2134 203 81 267 2316 516998928 516996872 0.000000e+00 1775.0
2 TraesCS7A01G353400 chr7A 77.214 1084 203 37 1077 2139 516990181 516989121 7.520000e-166 593.0
3 TraesCS7A01G353400 chr7A 86.392 316 29 6 2537 2842 516996880 516996569 1.810000e-87 333.0
4 TraesCS7A01G353400 chr7A 78.389 509 86 23 1594 2087 670946630 670946131 3.050000e-80 309.0
5 TraesCS7A01G353400 chr7A 100.000 84 0 0 3067 3150 517412725 517412642 4.210000e-34 156.0
6 TraesCS7A01G353400 chr7A 81.818 165 28 1 2358 2522 74852523 74852361 1.520000e-28 137.0
7 TraesCS7A01G353400 chr7D 88.904 2145 118 45 267 2316 478326811 478328930 0.000000e+00 2532.0
8 TraesCS7A01G353400 chr7D 84.601 2104 178 72 267 2316 478573277 478571266 0.000000e+00 1956.0
9 TraesCS7A01G353400 chr7D 87.500 248 20 4 2533 2770 478328919 478329165 3.090000e-70 276.0
10 TraesCS7A01G353400 chr7D 84.456 193 21 3 2592 2776 478569929 478569738 6.940000e-42 182.0
11 TraesCS7A01G353400 chr7D 83.721 172 24 3 2045 2213 478532693 478532523 3.250000e-35 159.0
12 TraesCS7A01G353400 chr7D 88.060 67 6 2 2533 2598 478571277 478571212 9.370000e-11 78.7
13 TraesCS7A01G353400 chr7B 90.393 1093 63 13 1259 2316 503472837 503473922 0.000000e+00 1399.0
14 TraesCS7A01G353400 chr7B 84.144 1028 69 35 267 1249 503471800 503472778 0.000000e+00 909.0
15 TraesCS7A01G353400 chr7B 89.592 711 40 14 1259 1944 504244360 504243659 0.000000e+00 872.0
16 TraesCS7A01G353400 chr7B 79.201 851 148 22 1298 2141 503496490 503497318 5.900000e-157 564.0
17 TraesCS7A01G353400 chr7B 85.684 475 33 23 393 855 504245210 504244759 4.760000e-128 468.0
18 TraesCS7A01G353400 chr7B 88.219 365 30 7 1941 2302 504237787 504237433 1.040000e-114 424.0
19 TraesCS7A01G353400 chr7B 83.562 365 27 10 894 1249 504244760 504244420 8.480000e-81 311.0
20 TraesCS7A01G353400 chr7B 77.963 481 86 19 1620 2087 643292135 643291662 1.850000e-72 283.0
21 TraesCS7A01G353400 chr7B 84.980 253 26 5 2533 2774 503473911 503474162 2.430000e-61 246.0
22 TraesCS7A01G353400 chr7B 81.579 266 48 1 1 266 707466444 707466180 5.290000e-53 219.0
23 TraesCS7A01G353400 chr7B 88.800 125 12 2 2564 2686 375543317 375543441 5.440000e-33 152.0
24 TraesCS7A01G353400 chr7B 78.802 217 43 3 9 224 616494760 616494974 3.280000e-30 143.0
25 TraesCS7A01G353400 chr7B 83.846 130 13 6 267 395 504246209 504246087 1.990000e-22 117.0
26 TraesCS7A01G353400 chr6B 76.166 386 80 10 1114 1494 173391805 173392183 3.210000e-45 193.0
27 TraesCS7A01G353400 chr6B 87.662 154 14 3 2538 2686 591329521 591329674 1.160000e-39 174.0
28 TraesCS7A01G353400 chr6B 86.792 159 15 4 2533 2686 64423484 64423327 4.180000e-39 172.0
29 TraesCS7A01G353400 chr6B 84.571 175 25 2 2358 2532 389236274 389236102 4.180000e-39 172.0
30 TraesCS7A01G353400 chr6B 86.000 50 6 1 1166 1214 89580796 89580845 6.000000e-03 52.8
31 TraesCS7A01G353400 chr6A 83.838 198 32 0 1297 1494 109135962 109136159 4.150000e-44 189.0
32 TraesCS7A01G353400 chr6A 80.769 182 30 4 2358 2537 67797042 67796864 1.520000e-28 137.0
33 TraesCS7A01G353400 chr6A 81.373 102 19 0 1114 1215 109135768 109135869 2.010000e-12 84.2
34 TraesCS7A01G353400 chr2B 80.156 257 48 3 9 264 172178920 172179174 4.150000e-44 189.0
35 TraesCS7A01G353400 chr6D 75.888 394 80 10 1114 1494 90922746 90923137 1.490000e-43 187.0
36 TraesCS7A01G353400 chr3A 77.101 345 62 9 1152 1494 113922397 113922068 1.930000e-42 183.0
37 TraesCS7A01G353400 chr4B 86.792 159 15 4 2533 2686 283207024 283207181 4.180000e-39 172.0
38 TraesCS7A01G353400 chr4B 75.620 242 55 3 21 260 95431287 95431526 1.990000e-22 117.0
39 TraesCS7A01G353400 chr1D 78.764 259 53 2 9 267 24206174 24205918 4.180000e-39 172.0
40 TraesCS7A01G353400 chr5D 87.681 138 17 0 25 162 204310599 204310736 9.040000e-36 161.0
41 TraesCS7A01G353400 chr5B 90.909 121 9 2 2568 2686 381102324 381102444 9.040000e-36 161.0
42 TraesCS7A01G353400 chr5A 77.366 243 53 2 11 253 536794901 536795141 3.280000e-30 143.0
43 TraesCS7A01G353400 chr5A 75.096 261 57 4 1 257 7656761 7657017 7.140000e-22 115.0
44 TraesCS7A01G353400 chr2A 82.692 156 26 1 9 163 122135812 122135967 1.520000e-28 137.0
45 TraesCS7A01G353400 chr2D 86.957 69 8 1 1147 1215 55630157 55630090 3.370000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G353400 chr7A 517412642 517415791 3149 True 2722.000000 5288 100.000000 1 3150 2 chr7A.!!$R5 3149
1 TraesCS7A01G353400 chr7A 516996569 516998928 2359 True 1054.000000 1775 84.667500 267 2842 2 chr7A.!!$R4 2575
2 TraesCS7A01G353400 chr7A 516989121 516990181 1060 True 593.000000 593 77.214000 1077 2139 1 chr7A.!!$R2 1062
3 TraesCS7A01G353400 chr7D 478326811 478329165 2354 False 1404.000000 2532 88.202000 267 2770 2 chr7D.!!$F1 2503
4 TraesCS7A01G353400 chr7D 478569738 478573277 3539 True 738.900000 1956 85.705667 267 2776 3 chr7D.!!$R2 2509
5 TraesCS7A01G353400 chr7B 503471800 503474162 2362 False 851.333333 1399 86.505667 267 2774 3 chr7B.!!$F4 2507
6 TraesCS7A01G353400 chr7B 503496490 503497318 828 False 564.000000 564 79.201000 1298 2141 1 chr7B.!!$F2 843
7 TraesCS7A01G353400 chr7B 504243659 504246209 2550 True 442.000000 872 85.671000 267 1944 4 chr7B.!!$R4 1677

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.096976 CGGGCGTTGATGTCATGTTC 59.903 55.0 0.00 0.00 0.00 3.18 F
690 1660 0.099259 GTGCGCATGCTGCTGATTAA 59.901 50.0 26.54 9.85 42.25 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1510 2616 0.659957 GTAGTAGTACGGGTCAGCGG 59.340 60.0 0.00 0.0 0.0 5.52 R
2361 3499 0.036105 ATGCGCATGAGTGAGGACAA 60.036 50.0 24.69 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.767841 AGCTGTGTCGAGCTCGCG 62.768 66.667 30.97 16.17 46.85 5.87
20 21 3.168604 CTGTGTCGAGCTCGCGTG 61.169 66.667 30.97 14.40 39.60 5.34
21 22 3.595108 CTGTGTCGAGCTCGCGTGA 62.595 63.158 30.97 11.48 39.60 4.35
22 23 2.872001 GTGTCGAGCTCGCGTGAG 60.872 66.667 30.97 21.61 45.49 3.51
23 24 4.103103 TGTCGAGCTCGCGTGAGG 62.103 66.667 30.97 10.91 42.79 3.86
24 25 3.800863 GTCGAGCTCGCGTGAGGA 61.801 66.667 30.97 13.07 42.79 3.71
25 26 3.500642 TCGAGCTCGCGTGAGGAG 61.501 66.667 30.97 9.04 42.79 3.69
26 27 4.544689 CGAGCTCGCGTGAGGAGG 62.545 72.222 25.07 3.26 42.79 4.30
27 28 3.444805 GAGCTCGCGTGAGGAGGT 61.445 66.667 26.24 12.80 44.31 3.85
28 29 2.045242 AGCTCGCGTGAGGAGGTA 60.045 61.111 26.24 0.00 42.79 3.08
29 30 1.654954 GAGCTCGCGTGAGGAGGTAA 61.655 60.000 26.24 0.00 41.91 2.85
30 31 1.038130 AGCTCGCGTGAGGAGGTAAT 61.038 55.000 26.24 0.00 42.79 1.89
31 32 0.595310 GCTCGCGTGAGGAGGTAATC 60.595 60.000 26.24 4.27 42.79 1.75
61 62 4.870123 TTTTCCTTTGGTGGATGATGTG 57.130 40.909 0.00 0.00 35.83 3.21
62 63 2.512692 TCCTTTGGTGGATGATGTGG 57.487 50.000 0.00 0.00 0.00 4.17
63 64 1.710244 TCCTTTGGTGGATGATGTGGT 59.290 47.619 0.00 0.00 0.00 4.16
64 65 1.820519 CCTTTGGTGGATGATGTGGTG 59.179 52.381 0.00 0.00 0.00 4.17
65 66 1.820519 CTTTGGTGGATGATGTGGTGG 59.179 52.381 0.00 0.00 0.00 4.61
66 67 0.776810 TTGGTGGATGATGTGGTGGT 59.223 50.000 0.00 0.00 0.00 4.16
67 68 1.662686 TGGTGGATGATGTGGTGGTA 58.337 50.000 0.00 0.00 0.00 3.25
68 69 1.280710 TGGTGGATGATGTGGTGGTAC 59.719 52.381 0.00 0.00 0.00 3.34
69 70 1.408266 GGTGGATGATGTGGTGGTACC 60.408 57.143 4.43 4.43 39.22 3.34
77 78 3.805928 TGGTGGTACCAGAGGCAG 58.194 61.111 16.93 0.00 44.79 4.85
78 79 1.918293 TGGTGGTACCAGAGGCAGG 60.918 63.158 16.93 0.00 44.79 4.85
79 80 1.918800 GGTGGTACCAGAGGCAGGT 60.919 63.158 16.93 1.98 43.14 4.00
80 81 0.616679 GGTGGTACCAGAGGCAGGTA 60.617 60.000 16.93 0.14 40.54 3.08
81 82 0.824759 GTGGTACCAGAGGCAGGTAG 59.175 60.000 16.93 0.00 42.01 3.18
83 84 2.017559 GGTACCAGAGGCAGGTAGCG 62.018 65.000 7.15 0.00 46.36 4.26
91 92 4.752879 GCAGGTAGCGGGCGTTGA 62.753 66.667 0.00 0.00 0.00 3.18
92 93 2.186903 CAGGTAGCGGGCGTTGAT 59.813 61.111 0.00 0.00 0.00 2.57
93 94 2.173669 CAGGTAGCGGGCGTTGATG 61.174 63.158 0.00 0.00 0.00 3.07
94 95 2.125269 GGTAGCGGGCGTTGATGT 60.125 61.111 0.00 0.00 0.00 3.06
95 96 2.171725 GGTAGCGGGCGTTGATGTC 61.172 63.158 0.00 0.00 0.00 3.06
96 97 1.447140 GTAGCGGGCGTTGATGTCA 60.447 57.895 0.00 0.00 0.00 3.58
97 98 0.810031 GTAGCGGGCGTTGATGTCAT 60.810 55.000 0.00 0.00 0.00 3.06
98 99 0.809636 TAGCGGGCGTTGATGTCATG 60.810 55.000 0.00 0.00 0.00 3.07
99 100 2.398554 GCGGGCGTTGATGTCATGT 61.399 57.895 0.00 0.00 0.00 3.21
100 101 1.922135 GCGGGCGTTGATGTCATGTT 61.922 55.000 0.00 0.00 0.00 2.71
101 102 0.096976 CGGGCGTTGATGTCATGTTC 59.903 55.000 0.00 0.00 0.00 3.18
102 103 1.164411 GGGCGTTGATGTCATGTTCA 58.836 50.000 0.00 0.00 0.00 3.18
103 104 1.131126 GGGCGTTGATGTCATGTTCAG 59.869 52.381 0.00 0.00 0.00 3.02
104 105 2.076100 GGCGTTGATGTCATGTTCAGA 58.924 47.619 0.00 0.00 0.00 3.27
105 106 2.094894 GGCGTTGATGTCATGTTCAGAG 59.905 50.000 0.00 0.00 0.00 3.35
106 107 2.094894 GCGTTGATGTCATGTTCAGAGG 59.905 50.000 0.00 0.00 0.00 3.69
107 108 3.588955 CGTTGATGTCATGTTCAGAGGA 58.411 45.455 0.00 0.00 0.00 3.71
108 109 4.186926 CGTTGATGTCATGTTCAGAGGAT 58.813 43.478 0.00 0.00 0.00 3.24
109 110 4.633126 CGTTGATGTCATGTTCAGAGGATT 59.367 41.667 0.00 0.00 0.00 3.01
110 111 5.220548 CGTTGATGTCATGTTCAGAGGATTC 60.221 44.000 0.00 0.00 0.00 2.52
111 112 5.688814 TGATGTCATGTTCAGAGGATTCT 57.311 39.130 0.00 0.00 0.00 2.40
112 113 6.058553 TGATGTCATGTTCAGAGGATTCTT 57.941 37.500 0.00 0.00 0.00 2.52
113 114 6.111382 TGATGTCATGTTCAGAGGATTCTTC 58.889 40.000 0.00 0.00 0.00 2.87
114 115 4.498241 TGTCATGTTCAGAGGATTCTTCG 58.502 43.478 0.00 0.00 0.00 3.79
115 116 3.868077 GTCATGTTCAGAGGATTCTTCGG 59.132 47.826 0.00 0.00 0.00 4.30
116 117 3.515502 TCATGTTCAGAGGATTCTTCGGT 59.484 43.478 0.00 0.00 0.00 4.69
117 118 3.594603 TGTTCAGAGGATTCTTCGGTC 57.405 47.619 0.00 0.00 0.00 4.79
118 119 3.165875 TGTTCAGAGGATTCTTCGGTCT 58.834 45.455 0.00 0.00 0.00 3.85
119 120 3.578716 TGTTCAGAGGATTCTTCGGTCTT 59.421 43.478 0.00 0.00 0.00 3.01
120 121 3.876274 TCAGAGGATTCTTCGGTCTTG 57.124 47.619 0.00 0.00 0.00 3.02
121 122 3.431415 TCAGAGGATTCTTCGGTCTTGA 58.569 45.455 0.00 0.00 0.00 3.02
122 123 4.026744 TCAGAGGATTCTTCGGTCTTGAT 58.973 43.478 0.00 0.00 0.00 2.57
123 124 4.467795 TCAGAGGATTCTTCGGTCTTGATT 59.532 41.667 0.00 0.00 0.00 2.57
124 125 4.569966 CAGAGGATTCTTCGGTCTTGATTG 59.430 45.833 0.00 0.00 0.00 2.67
125 126 4.223923 AGAGGATTCTTCGGTCTTGATTGT 59.776 41.667 0.00 0.00 0.00 2.71
126 127 5.422331 AGAGGATTCTTCGGTCTTGATTGTA 59.578 40.000 0.00 0.00 0.00 2.41
127 128 6.098982 AGAGGATTCTTCGGTCTTGATTGTAT 59.901 38.462 0.00 0.00 0.00 2.29
128 129 6.653989 AGGATTCTTCGGTCTTGATTGTATT 58.346 36.000 0.00 0.00 0.00 1.89
129 130 7.112779 AGGATTCTTCGGTCTTGATTGTATTT 58.887 34.615 0.00 0.00 0.00 1.40
130 131 7.611855 AGGATTCTTCGGTCTTGATTGTATTTT 59.388 33.333 0.00 0.00 0.00 1.82
131 132 8.244113 GGATTCTTCGGTCTTGATTGTATTTTT 58.756 33.333 0.00 0.00 0.00 1.94
134 135 8.842358 TCTTCGGTCTTGATTGTATTTTTACT 57.158 30.769 0.00 0.00 0.00 2.24
135 136 9.280174 TCTTCGGTCTTGATTGTATTTTTACTT 57.720 29.630 0.00 0.00 0.00 2.24
136 137 9.543018 CTTCGGTCTTGATTGTATTTTTACTTC 57.457 33.333 0.00 0.00 0.00 3.01
137 138 8.842358 TCGGTCTTGATTGTATTTTTACTTCT 57.158 30.769 0.00 0.00 0.00 2.85
138 139 9.280174 TCGGTCTTGATTGTATTTTTACTTCTT 57.720 29.630 0.00 0.00 0.00 2.52
139 140 9.329913 CGGTCTTGATTGTATTTTTACTTCTTG 57.670 33.333 0.00 0.00 0.00 3.02
140 141 9.626045 GGTCTTGATTGTATTTTTACTTCTTGG 57.374 33.333 0.00 0.00 0.00 3.61
149 150 9.959749 TGTATTTTTACTTCTTGGTTGTTGATC 57.040 29.630 0.00 0.00 0.00 2.92
150 151 9.959749 GTATTTTTACTTCTTGGTTGTTGATCA 57.040 29.630 0.00 0.00 0.00 2.92
152 153 8.870160 TTTTTACTTCTTGGTTGTTGATCATG 57.130 30.769 0.00 0.00 0.00 3.07
153 154 7.581213 TTTACTTCTTGGTTGTTGATCATGT 57.419 32.000 0.00 0.00 0.00 3.21
154 155 5.443185 ACTTCTTGGTTGTTGATCATGTG 57.557 39.130 0.00 0.00 0.00 3.21
155 156 4.889409 ACTTCTTGGTTGTTGATCATGTGT 59.111 37.500 0.00 0.00 0.00 3.72
156 157 4.834357 TCTTGGTTGTTGATCATGTGTG 57.166 40.909 0.00 0.00 0.00 3.82
157 158 4.206375 TCTTGGTTGTTGATCATGTGTGT 58.794 39.130 0.00 0.00 0.00 3.72
158 159 5.372373 TCTTGGTTGTTGATCATGTGTGTA 58.628 37.500 0.00 0.00 0.00 2.90
159 160 5.825151 TCTTGGTTGTTGATCATGTGTGTAA 59.175 36.000 0.00 0.00 0.00 2.41
160 161 6.319911 TCTTGGTTGTTGATCATGTGTGTAAA 59.680 34.615 0.00 0.00 0.00 2.01
161 162 6.070897 TGGTTGTTGATCATGTGTGTAAAG 57.929 37.500 0.00 0.00 0.00 1.85
162 163 5.825151 TGGTTGTTGATCATGTGTGTAAAGA 59.175 36.000 0.00 0.00 0.00 2.52
163 164 6.142817 GGTTGTTGATCATGTGTGTAAAGAC 58.857 40.000 0.00 0.00 0.00 3.01
164 165 6.017109 GGTTGTTGATCATGTGTGTAAAGACT 60.017 38.462 0.00 0.00 0.00 3.24
165 166 7.172532 GGTTGTTGATCATGTGTGTAAAGACTA 59.827 37.037 0.00 0.00 0.00 2.59
166 167 8.556194 GTTGTTGATCATGTGTGTAAAGACTAA 58.444 33.333 0.00 0.00 0.00 2.24
167 168 8.083462 TGTTGATCATGTGTGTAAAGACTAAC 57.917 34.615 0.00 0.00 0.00 2.34
168 169 7.713073 TGTTGATCATGTGTGTAAAGACTAACA 59.287 33.333 0.00 0.00 0.00 2.41
169 170 8.721478 GTTGATCATGTGTGTAAAGACTAACAT 58.279 33.333 0.00 0.00 34.56 2.71
170 171 8.846943 TGATCATGTGTGTAAAGACTAACATT 57.153 30.769 0.00 0.00 33.00 2.71
171 172 8.935844 TGATCATGTGTGTAAAGACTAACATTC 58.064 33.333 0.00 0.00 33.00 2.67
172 173 9.155975 GATCATGTGTGTAAAGACTAACATTCT 57.844 33.333 0.00 0.00 33.00 2.40
173 174 8.310406 TCATGTGTGTAAAGACTAACATTCTG 57.690 34.615 0.00 0.00 33.00 3.02
174 175 6.539649 TGTGTGTAAAGACTAACATTCTGC 57.460 37.500 0.00 0.00 0.00 4.26
175 176 6.288294 TGTGTGTAAAGACTAACATTCTGCT 58.712 36.000 0.00 0.00 0.00 4.24
176 177 6.202762 TGTGTGTAAAGACTAACATTCTGCTG 59.797 38.462 0.00 0.00 0.00 4.41
177 178 6.202954 GTGTGTAAAGACTAACATTCTGCTGT 59.797 38.462 0.00 0.00 0.00 4.40
178 179 6.423905 TGTGTAAAGACTAACATTCTGCTGTC 59.576 38.462 0.00 0.00 0.00 3.51
179 180 6.647067 GTGTAAAGACTAACATTCTGCTGTCT 59.353 38.462 0.00 0.00 36.49 3.41
180 181 7.171678 GTGTAAAGACTAACATTCTGCTGTCTT 59.828 37.037 0.00 0.00 43.70 3.01
181 182 8.364894 TGTAAAGACTAACATTCTGCTGTCTTA 58.635 33.333 0.00 0.00 41.86 2.10
182 183 9.372369 GTAAAGACTAACATTCTGCTGTCTTAT 57.628 33.333 0.00 0.00 41.86 1.73
183 184 8.485976 AAAGACTAACATTCTGCTGTCTTATC 57.514 34.615 0.00 0.00 41.86 1.75
184 185 7.175347 AGACTAACATTCTGCTGTCTTATCA 57.825 36.000 0.00 0.00 31.71 2.15
185 186 7.615403 AGACTAACATTCTGCTGTCTTATCAA 58.385 34.615 0.00 0.00 31.71 2.57
186 187 8.263640 AGACTAACATTCTGCTGTCTTATCAAT 58.736 33.333 0.00 0.00 31.71 2.57
187 188 8.798859 ACTAACATTCTGCTGTCTTATCAATT 57.201 30.769 0.00 0.00 0.00 2.32
188 189 8.887717 ACTAACATTCTGCTGTCTTATCAATTC 58.112 33.333 0.00 0.00 0.00 2.17
189 190 7.934855 AACATTCTGCTGTCTTATCAATTCT 57.065 32.000 0.00 0.00 0.00 2.40
191 192 9.624373 AACATTCTGCTGTCTTATCAATTCTAT 57.376 29.630 0.00 0.00 0.00 1.98
192 193 9.270640 ACATTCTGCTGTCTTATCAATTCTATC 57.729 33.333 0.00 0.00 0.00 2.08
193 194 9.269453 CATTCTGCTGTCTTATCAATTCTATCA 57.731 33.333 0.00 0.00 0.00 2.15
194 195 8.654230 TTCTGCTGTCTTATCAATTCTATCAC 57.346 34.615 0.00 0.00 0.00 3.06
195 196 6.920210 TCTGCTGTCTTATCAATTCTATCACG 59.080 38.462 0.00 0.00 0.00 4.35
196 197 6.573434 TGCTGTCTTATCAATTCTATCACGT 58.427 36.000 0.00 0.00 0.00 4.49
197 198 6.476706 TGCTGTCTTATCAATTCTATCACGTG 59.523 38.462 9.94 9.94 0.00 4.49
198 199 6.074088 GCTGTCTTATCAATTCTATCACGTGG 60.074 42.308 17.00 0.00 0.00 4.94
199 200 6.280643 TGTCTTATCAATTCTATCACGTGGG 58.719 40.000 17.00 6.73 0.00 4.61
200 201 6.127168 TGTCTTATCAATTCTATCACGTGGGT 60.127 38.462 17.00 7.66 0.00 4.51
201 202 6.421202 GTCTTATCAATTCTATCACGTGGGTC 59.579 42.308 17.00 0.00 0.00 4.46
202 203 6.323996 TCTTATCAATTCTATCACGTGGGTCT 59.676 38.462 17.00 0.91 0.00 3.85
203 204 4.819105 TCAATTCTATCACGTGGGTCTT 57.181 40.909 17.00 0.00 0.00 3.01
204 205 5.160607 TCAATTCTATCACGTGGGTCTTT 57.839 39.130 17.00 0.35 0.00 2.52
205 206 4.935205 TCAATTCTATCACGTGGGTCTTTG 59.065 41.667 17.00 12.55 0.00 2.77
206 207 2.380084 TCTATCACGTGGGTCTTTGC 57.620 50.000 17.00 0.00 0.00 3.68
207 208 1.621317 TCTATCACGTGGGTCTTTGCA 59.379 47.619 17.00 0.00 0.00 4.08
208 209 2.236146 TCTATCACGTGGGTCTTTGCAT 59.764 45.455 17.00 0.51 0.00 3.96
209 210 1.167851 ATCACGTGGGTCTTTGCATG 58.832 50.000 17.00 0.00 0.00 4.06
210 211 0.107643 TCACGTGGGTCTTTGCATGA 59.892 50.000 17.00 0.00 0.00 3.07
211 212 0.238289 CACGTGGGTCTTTGCATGAC 59.762 55.000 7.95 10.74 0.00 3.06
212 213 0.108585 ACGTGGGTCTTTGCATGACT 59.891 50.000 16.48 0.00 35.04 3.41
213 214 1.238439 CGTGGGTCTTTGCATGACTT 58.762 50.000 16.48 0.00 35.04 3.01
214 215 1.069022 CGTGGGTCTTTGCATGACTTG 60.069 52.381 16.48 4.70 35.04 3.16
215 216 1.956477 GTGGGTCTTTGCATGACTTGT 59.044 47.619 16.48 0.00 35.04 3.16
216 217 3.146066 GTGGGTCTTTGCATGACTTGTA 58.854 45.455 16.48 2.94 35.04 2.41
217 218 3.758554 GTGGGTCTTTGCATGACTTGTAT 59.241 43.478 16.48 0.00 35.04 2.29
218 219 4.218417 GTGGGTCTTTGCATGACTTGTATT 59.782 41.667 16.48 0.00 35.04 1.89
219 220 5.414454 GTGGGTCTTTGCATGACTTGTATTA 59.586 40.000 16.48 0.00 35.04 0.98
220 221 6.095440 GTGGGTCTTTGCATGACTTGTATTAT 59.905 38.462 16.48 0.00 35.04 1.28
221 222 6.095300 TGGGTCTTTGCATGACTTGTATTATG 59.905 38.462 16.48 0.00 35.04 1.90
222 223 6.318648 GGGTCTTTGCATGACTTGTATTATGA 59.681 38.462 16.48 0.00 35.04 2.15
223 224 7.013655 GGGTCTTTGCATGACTTGTATTATGAT 59.986 37.037 16.48 0.00 35.04 2.45
224 225 8.408601 GGTCTTTGCATGACTTGTATTATGATT 58.591 33.333 16.48 0.00 35.04 2.57
225 226 9.793252 GTCTTTGCATGACTTGTATTATGATTT 57.207 29.630 11.62 0.00 0.00 2.17
260 261 5.621635 CGAGACACGTATTACCATGAAAG 57.378 43.478 0.00 0.00 37.22 2.62
261 262 5.337554 CGAGACACGTATTACCATGAAAGA 58.662 41.667 0.00 0.00 37.22 2.52
262 263 5.803461 CGAGACACGTATTACCATGAAAGAA 59.197 40.000 0.00 0.00 37.22 2.52
263 264 6.309494 CGAGACACGTATTACCATGAAAGAAA 59.691 38.462 0.00 0.00 37.22 2.52
264 265 7.148705 CGAGACACGTATTACCATGAAAGAAAA 60.149 37.037 0.00 0.00 37.22 2.29
265 266 8.029642 AGACACGTATTACCATGAAAGAAAAG 57.970 34.615 0.00 0.00 0.00 2.27
361 371 0.451792 GCTGCTTGACTCGCGAAAAG 60.452 55.000 11.33 15.09 0.00 2.27
517 1458 1.298713 CGCCGACTCAGAGGAATCG 60.299 63.158 1.53 2.15 42.06 3.34
521 1462 0.382515 CGACTCAGAGGAATCGGGAC 59.617 60.000 1.53 0.00 38.98 4.46
522 1463 1.770294 GACTCAGAGGAATCGGGACT 58.230 55.000 1.53 0.00 0.00 3.85
523 1464 1.407258 GACTCAGAGGAATCGGGACTG 59.593 57.143 1.53 0.00 0.00 3.51
524 1465 1.006043 ACTCAGAGGAATCGGGACTGA 59.994 52.381 1.53 0.00 36.42 3.41
525 1466 1.407258 CTCAGAGGAATCGGGACTGAC 59.593 57.143 0.00 0.00 34.58 3.51
543 1489 4.682334 CCCACCCATGCACAGCCA 62.682 66.667 0.00 0.00 0.00 4.75
546 1492 1.514087 CACCCATGCACAGCCAATC 59.486 57.895 0.00 0.00 0.00 2.67
578 1525 1.284982 ACATCAACACGTCTCTGCGC 61.285 55.000 0.00 0.00 34.88 6.09
579 1526 2.088763 ATCAACACGTCTCTGCGCG 61.089 57.895 0.00 0.00 34.88 6.86
629 1598 5.294799 GGTATACGATAACCAACACATGCAA 59.705 40.000 0.00 0.00 35.73 4.08
630 1599 3.829886 ACGATAACCAACACATGCAAG 57.170 42.857 0.00 0.00 0.00 4.01
631 1600 2.487762 ACGATAACCAACACATGCAAGG 59.512 45.455 0.00 0.00 0.00 3.61
632 1601 2.746904 CGATAACCAACACATGCAAGGA 59.253 45.455 0.00 0.00 0.00 3.36
633 1602 3.426159 CGATAACCAACACATGCAAGGAC 60.426 47.826 0.00 0.00 0.00 3.85
690 1660 0.099259 GTGCGCATGCTGCTGATTAA 59.901 50.000 26.54 9.85 42.25 1.40
774 1751 1.303074 TACGACTGCAGAGTCCGGT 60.303 57.895 23.35 10.51 45.27 5.28
788 1765 4.223032 AGAGTCCGGTCATGAACTTTGTAT 59.777 41.667 9.52 0.00 0.00 2.29
789 1766 4.253685 AGTCCGGTCATGAACTTTGTATG 58.746 43.478 9.52 0.00 0.00 2.39
795 1772 5.445939 CGGTCATGAACTTTGTATGTAGCAC 60.446 44.000 9.52 0.00 0.00 4.40
803 1785 6.263516 ACTTTGTATGTAGCACTTCGTAGA 57.736 37.500 0.00 0.00 0.00 2.59
821 1803 1.279527 GAACGTGCGTGATCGGAACA 61.280 55.000 0.00 0.00 39.39 3.18
861 1850 3.905678 CCGCGGGCTAGACTCCTG 61.906 72.222 20.10 0.00 0.00 3.86
863 1852 4.228567 GCGGGCTAGACTCCTGGC 62.229 72.222 0.00 0.00 44.99 4.85
864 1853 2.443016 CGGGCTAGACTCCTGGCT 60.443 66.667 0.00 0.00 45.06 4.75
865 1854 1.152735 CGGGCTAGACTCCTGGCTA 60.153 63.158 0.00 0.00 45.06 3.93
866 1855 1.175983 CGGGCTAGACTCCTGGCTAG 61.176 65.000 0.00 1.79 45.06 3.42
867 1856 0.830023 GGGCTAGACTCCTGGCTAGG 60.830 65.000 10.47 10.47 45.06 3.02
911 1900 3.890128 TCGAGCTCGAGCACTATAAATG 58.110 45.455 36.87 17.08 44.22 2.32
965 1963 5.417811 AGCTCACATCACAAGAGTTATCTG 58.582 41.667 0.00 0.00 35.37 2.90
1023 2022 4.021925 GCCTTCGCCACCAGGTCT 62.022 66.667 0.00 0.00 37.19 3.85
1128 2136 1.216977 CAACCTGGCGTCCATCGTA 59.783 57.895 0.00 0.00 42.13 3.43
1136 2144 2.463620 CGTCCATCGTACGGTCGGA 61.464 63.158 16.52 14.72 36.71 4.55
1203 2211 0.970937 TCCGCCTCTTCTTCCACGAT 60.971 55.000 0.00 0.00 0.00 3.73
1249 2257 4.942483 CCGTTCCTCTCTACTCTTCTGTTA 59.058 45.833 0.00 0.00 0.00 2.41
1252 2260 6.316640 CGTTCCTCTCTACTCTTCTGTTATCA 59.683 42.308 0.00 0.00 0.00 2.15
1254 2262 6.964464 TCCTCTCTACTCTTCTGTTATCAGT 58.036 40.000 0.83 0.00 41.91 3.41
1280 2343 9.539825 TTAAGTACTGACGTTTAATGGTGTTTA 57.460 29.630 0.00 0.00 0.00 2.01
1344 2407 1.281960 CGACACCTCGACGTTCACT 59.718 57.895 0.00 0.00 43.06 3.41
1510 2616 1.632948 GGTTAGTCGCTTCAACGGGC 61.633 60.000 0.00 0.00 0.00 6.13
1534 2661 2.076100 TGACCCGTACTACTACACGTG 58.924 52.381 15.48 15.48 36.44 4.49
1555 2682 3.504134 TGCTGCGCTTATTTTTACTGGAA 59.496 39.130 9.73 0.00 0.00 3.53
1804 2931 1.598130 GCAGTGCCAGTTCTTCCGT 60.598 57.895 2.85 0.00 0.00 4.69
1831 2958 1.067693 TCTACAACGAGCGCAACATG 58.932 50.000 11.47 5.91 0.00 3.21
1903 3030 2.106074 CAGCAACCTCGCGCCATTA 61.106 57.895 0.00 0.00 36.85 1.90
1944 3071 0.168788 TTCGACAACGCCTACTACCG 59.831 55.000 0.00 0.00 39.58 4.02
1951 3078 0.613012 ACGCCTACTACCGGAACCTT 60.613 55.000 9.46 0.00 0.00 3.50
2090 3217 3.052909 ATGCTGAAGATGGGCGGCT 62.053 57.895 9.56 0.00 37.30 5.52
2092 3219 1.153168 GCTGAAGATGGGCGGCTTA 60.153 57.895 9.56 0.00 33.67 3.09
2128 3255 1.592400 CGCAGACGGAGGTCAGGTTA 61.592 60.000 0.00 0.00 45.92 2.85
2158 3291 0.033504 AGCCCAACTGAGTACACGTG 59.966 55.000 15.48 15.48 0.00 4.49
2159 3292 0.949105 GCCCAACTGAGTACACGTGG 60.949 60.000 21.57 2.84 0.00 4.94
2160 3293 0.677288 CCCAACTGAGTACACGTGGA 59.323 55.000 21.57 9.00 0.00 4.02
2161 3294 1.336887 CCCAACTGAGTACACGTGGAG 60.337 57.143 21.57 9.55 0.00 3.86
2177 3310 4.689345 ACGTGGAGAAGTGTGCTAAATAAC 59.311 41.667 0.00 0.00 0.00 1.89
2197 3330 2.095263 ACGATTGATGCCTTGGAAAACG 60.095 45.455 0.00 0.00 0.00 3.60
2213 3346 0.981183 AACGAGGCATTGGTCAGGTA 59.019 50.000 0.00 0.00 0.00 3.08
2215 3348 0.537188 CGAGGCATTGGTCAGGTACT 59.463 55.000 0.00 0.00 43.88 2.73
2217 3350 1.555075 GAGGCATTGGTCAGGTACTCA 59.445 52.381 0.00 0.00 34.60 3.41
2218 3351 1.556911 AGGCATTGGTCAGGTACTCAG 59.443 52.381 0.00 0.00 34.60 3.35
2219 3352 1.407437 GGCATTGGTCAGGTACTCAGG 60.407 57.143 0.00 0.00 34.60 3.86
2221 3354 2.290323 GCATTGGTCAGGTACTCAGGTT 60.290 50.000 0.00 0.00 34.60 3.50
2222 3355 3.600388 CATTGGTCAGGTACTCAGGTTC 58.400 50.000 0.00 0.00 34.60 3.62
2224 3357 1.968493 TGGTCAGGTACTCAGGTTCAC 59.032 52.381 0.00 0.00 34.60 3.18
2238 3376 8.229253 ACTCAGGTTCACGTATTGTATGTATA 57.771 34.615 0.00 0.00 0.00 1.47
2239 3377 8.857098 ACTCAGGTTCACGTATTGTATGTATAT 58.143 33.333 0.00 0.00 0.00 0.86
2270 3408 2.482235 CGAATGTACAAACGCTCGTTG 58.518 47.619 8.50 5.88 38.47 4.10
2279 3417 0.320771 AACGCTCGTTGGCTCAATCT 60.321 50.000 6.88 0.00 36.91 2.40
2315 3453 9.672086 GTGCAAACTACAAAGTATCAAAATGTA 57.328 29.630 0.00 0.00 33.75 2.29
2321 3459 8.789762 ACTACAAAGTATCAAAATGTAACACCC 58.210 33.333 0.00 0.00 32.84 4.61
2322 3460 7.833285 ACAAAGTATCAAAATGTAACACCCT 57.167 32.000 0.00 0.00 0.00 4.34
2323 3461 7.657336 ACAAAGTATCAAAATGTAACACCCTG 58.343 34.615 0.00 0.00 0.00 4.45
2324 3462 7.286775 ACAAAGTATCAAAATGTAACACCCTGT 59.713 33.333 0.00 0.00 0.00 4.00
2325 3463 7.833285 AAGTATCAAAATGTAACACCCTGTT 57.167 32.000 0.00 0.00 43.88 3.16
2326 3464 8.927675 AAGTATCAAAATGTAACACCCTGTTA 57.072 30.769 0.00 0.00 41.45 2.41
2334 3472 2.814280 AACACCCTGTTACGTCTGAG 57.186 50.000 0.00 0.00 39.09 3.35
2335 3473 0.966920 ACACCCTGTTACGTCTGAGG 59.033 55.000 0.00 0.00 0.00 3.86
2341 3479 4.730949 CCTGTTACGTCTGAGGGATTAA 57.269 45.455 0.00 0.00 0.00 1.40
2342 3480 4.683832 CCTGTTACGTCTGAGGGATTAAG 58.316 47.826 0.00 0.00 0.00 1.85
2343 3481 4.401519 CCTGTTACGTCTGAGGGATTAAGA 59.598 45.833 0.00 0.00 0.00 2.10
2344 3482 5.320549 TGTTACGTCTGAGGGATTAAGAC 57.679 43.478 0.00 0.00 37.55 3.01
2345 3483 5.014858 TGTTACGTCTGAGGGATTAAGACT 58.985 41.667 0.00 0.00 38.53 3.24
2346 3484 5.105877 TGTTACGTCTGAGGGATTAAGACTG 60.106 44.000 0.00 0.00 38.53 3.51
2347 3485 2.761208 ACGTCTGAGGGATTAAGACTGG 59.239 50.000 2.15 0.00 38.53 4.00
2348 3486 2.482142 CGTCTGAGGGATTAAGACTGGC 60.482 54.545 0.00 0.00 38.53 4.85
2349 3487 2.119495 TCTGAGGGATTAAGACTGGCC 58.881 52.381 0.00 0.00 0.00 5.36
2350 3488 1.141858 CTGAGGGATTAAGACTGGCCC 59.858 57.143 0.00 0.00 39.12 5.80
2351 3489 3.761078 AGGGATTAAGACTGGCCCT 57.239 52.632 0.00 0.00 44.17 5.19
2352 3490 2.889522 AGGGATTAAGACTGGCCCTA 57.110 50.000 0.00 0.00 47.00 3.53
2353 3491 2.409570 AGGGATTAAGACTGGCCCTAC 58.590 52.381 0.00 0.00 47.00 3.18
2354 3492 2.124411 GGGATTAAGACTGGCCCTACA 58.876 52.381 0.00 0.00 35.86 2.74
2355 3493 2.508300 GGGATTAAGACTGGCCCTACAA 59.492 50.000 0.00 0.00 35.86 2.41
2356 3494 3.053917 GGGATTAAGACTGGCCCTACAAA 60.054 47.826 0.00 0.00 35.86 2.83
2357 3495 3.945921 GGATTAAGACTGGCCCTACAAAC 59.054 47.826 0.00 0.00 0.00 2.93
2358 3496 4.566907 GGATTAAGACTGGCCCTACAAACA 60.567 45.833 0.00 0.00 0.00 2.83
2359 3497 2.271944 AAGACTGGCCCTACAAACAC 57.728 50.000 0.00 0.00 0.00 3.32
2360 3498 1.435256 AGACTGGCCCTACAAACACT 58.565 50.000 0.00 0.00 0.00 3.55
2361 3499 1.774856 AGACTGGCCCTACAAACACTT 59.225 47.619 0.00 0.00 0.00 3.16
2362 3500 2.174854 AGACTGGCCCTACAAACACTTT 59.825 45.455 0.00 0.00 0.00 2.66
2363 3501 2.293399 GACTGGCCCTACAAACACTTTG 59.707 50.000 0.00 0.00 45.95 2.77
2375 3513 4.852138 CAAACACTTTGTCCTCACTCATG 58.148 43.478 0.00 0.00 35.94 3.07
2376 3514 2.498167 ACACTTTGTCCTCACTCATGC 58.502 47.619 0.00 0.00 0.00 4.06
2377 3515 1.462283 CACTTTGTCCTCACTCATGCG 59.538 52.381 0.00 0.00 0.00 4.73
2378 3516 0.445436 CTTTGTCCTCACTCATGCGC 59.555 55.000 0.00 0.00 0.00 6.09
2379 3517 0.250252 TTTGTCCTCACTCATGCGCA 60.250 50.000 14.96 14.96 0.00 6.09
2380 3518 0.036105 TTGTCCTCACTCATGCGCAT 60.036 50.000 19.28 19.28 0.00 4.73
2381 3519 0.036105 TGTCCTCACTCATGCGCATT 60.036 50.000 22.81 3.05 0.00 3.56
2382 3520 0.654683 GTCCTCACTCATGCGCATTC 59.345 55.000 22.81 0.00 0.00 2.67
2383 3521 0.249955 TCCTCACTCATGCGCATTCA 59.750 50.000 22.81 9.54 0.00 2.57
2384 3522 0.656259 CCTCACTCATGCGCATTCAG 59.344 55.000 22.81 21.12 0.00 3.02
2385 3523 0.656259 CTCACTCATGCGCATTCAGG 59.344 55.000 22.81 9.88 0.00 3.86
2386 3524 0.249955 TCACTCATGCGCATTCAGGA 59.750 50.000 22.81 14.06 0.00 3.86
2387 3525 0.376152 CACTCATGCGCATTCAGGAC 59.624 55.000 22.81 0.00 0.00 3.85
2388 3526 1.086067 ACTCATGCGCATTCAGGACG 61.086 55.000 22.81 7.81 0.00 4.79
2389 3527 0.807275 CTCATGCGCATTCAGGACGA 60.807 55.000 22.81 12.12 0.00 4.20
2390 3528 0.390998 TCATGCGCATTCAGGACGAA 60.391 50.000 22.81 0.00 38.22 3.85
2391 3529 0.247814 CATGCGCATTCAGGACGAAC 60.248 55.000 22.81 0.00 36.12 3.95
2392 3530 0.391661 ATGCGCATTCAGGACGAACT 60.392 50.000 19.28 0.00 36.12 3.01
2393 3531 0.602638 TGCGCATTCAGGACGAACTT 60.603 50.000 5.66 0.00 36.12 2.66
2394 3532 0.095417 GCGCATTCAGGACGAACTTC 59.905 55.000 0.30 0.00 36.12 3.01
2395 3533 0.721718 CGCATTCAGGACGAACTTCC 59.278 55.000 0.00 0.00 36.12 3.46
2402 3540 0.818296 AGGACGAACTTCCTGATCGG 59.182 55.000 0.00 0.00 44.97 4.18
2403 3541 0.531200 GGACGAACTTCCTGATCGGT 59.469 55.000 0.00 0.00 43.80 4.69
2404 3542 1.469423 GGACGAACTTCCTGATCGGTC 60.469 57.143 0.00 0.00 43.80 4.79
2405 3543 1.201647 GACGAACTTCCTGATCGGTCA 59.798 52.381 0.00 0.00 43.80 4.02
2406 3544 1.067776 ACGAACTTCCTGATCGGTCAC 60.068 52.381 0.00 0.00 43.80 3.67
2407 3545 1.202582 CGAACTTCCTGATCGGTCACT 59.797 52.381 0.00 0.00 37.32 3.41
2408 3546 2.732597 CGAACTTCCTGATCGGTCACTC 60.733 54.545 0.00 0.00 37.32 3.51
2409 3547 1.924731 ACTTCCTGATCGGTCACTCA 58.075 50.000 0.00 0.00 0.00 3.41
2410 3548 2.461695 ACTTCCTGATCGGTCACTCAT 58.538 47.619 0.00 0.00 0.00 2.90
2411 3549 2.428890 ACTTCCTGATCGGTCACTCATC 59.571 50.000 0.00 0.00 0.00 2.92
2412 3550 1.403814 TCCTGATCGGTCACTCATCC 58.596 55.000 0.00 0.00 0.00 3.51
2413 3551 1.063642 TCCTGATCGGTCACTCATCCT 60.064 52.381 0.00 0.00 0.00 3.24
2414 3552 2.174854 TCCTGATCGGTCACTCATCCTA 59.825 50.000 0.00 0.00 0.00 2.94
2415 3553 2.556189 CCTGATCGGTCACTCATCCTAG 59.444 54.545 0.00 0.00 0.00 3.02
2416 3554 3.481453 CTGATCGGTCACTCATCCTAGA 58.519 50.000 0.00 0.00 0.00 2.43
2417 3555 3.885901 CTGATCGGTCACTCATCCTAGAA 59.114 47.826 0.00 0.00 0.00 2.10
2418 3556 4.474394 TGATCGGTCACTCATCCTAGAAT 58.526 43.478 0.00 0.00 0.00 2.40
2419 3557 4.895889 TGATCGGTCACTCATCCTAGAATT 59.104 41.667 0.00 0.00 0.00 2.17
2420 3558 6.068670 TGATCGGTCACTCATCCTAGAATTA 58.931 40.000 0.00 0.00 0.00 1.40
2421 3559 5.769484 TCGGTCACTCATCCTAGAATTAC 57.231 43.478 0.00 0.00 0.00 1.89
2422 3560 4.583489 TCGGTCACTCATCCTAGAATTACC 59.417 45.833 0.00 0.00 0.00 2.85
2423 3561 4.262079 CGGTCACTCATCCTAGAATTACCC 60.262 50.000 0.00 0.00 0.00 3.69
2424 3562 4.040584 GGTCACTCATCCTAGAATTACCCC 59.959 50.000 0.00 0.00 0.00 4.95
2425 3563 4.654262 GTCACTCATCCTAGAATTACCCCA 59.346 45.833 0.00 0.00 0.00 4.96
2426 3564 5.130477 GTCACTCATCCTAGAATTACCCCAA 59.870 44.000 0.00 0.00 0.00 4.12
2427 3565 5.366768 TCACTCATCCTAGAATTACCCCAAG 59.633 44.000 0.00 0.00 0.00 3.61
2428 3566 5.131142 CACTCATCCTAGAATTACCCCAAGT 59.869 44.000 0.00 0.00 0.00 3.16
2429 3567 5.367060 ACTCATCCTAGAATTACCCCAAGTC 59.633 44.000 0.00 0.00 0.00 3.01
2430 3568 5.285401 TCATCCTAGAATTACCCCAAGTCA 58.715 41.667 0.00 0.00 33.61 3.41
2431 3569 5.729229 TCATCCTAGAATTACCCCAAGTCAA 59.271 40.000 0.00 0.00 33.61 3.18
2432 3570 6.216662 TCATCCTAGAATTACCCCAAGTCAAA 59.783 38.462 0.00 0.00 33.61 2.69
2433 3571 6.652205 TCCTAGAATTACCCCAAGTCAAAT 57.348 37.500 0.00 0.00 33.61 2.32
2434 3572 7.758820 TCCTAGAATTACCCCAAGTCAAATA 57.241 36.000 0.00 0.00 33.61 1.40
2435 3573 7.571025 TCCTAGAATTACCCCAAGTCAAATAC 58.429 38.462 0.00 0.00 33.61 1.89
2436 3574 7.183112 TCCTAGAATTACCCCAAGTCAAATACA 59.817 37.037 0.00 0.00 33.61 2.29
2437 3575 7.282450 CCTAGAATTACCCCAAGTCAAATACAC 59.718 40.741 0.00 0.00 33.61 2.90
2438 3576 6.790319 AGAATTACCCCAAGTCAAATACACT 58.210 36.000 0.00 0.00 33.61 3.55
2439 3577 7.238710 AGAATTACCCCAAGTCAAATACACTT 58.761 34.615 0.00 0.00 33.61 3.16
2440 3578 8.387813 AGAATTACCCCAAGTCAAATACACTTA 58.612 33.333 0.00 0.00 33.61 2.24
2441 3579 8.943594 AATTACCCCAAGTCAAATACACTTAA 57.056 30.769 0.00 0.00 32.61 1.85
2442 3580 7.748691 TTACCCCAAGTCAAATACACTTAAC 57.251 36.000 0.00 0.00 32.61 2.01
2443 3581 5.948842 ACCCCAAGTCAAATACACTTAACT 58.051 37.500 0.00 0.00 32.61 2.24
2444 3582 6.370453 ACCCCAAGTCAAATACACTTAACTT 58.630 36.000 0.00 0.00 32.61 2.66
2445 3583 6.837048 ACCCCAAGTCAAATACACTTAACTTT 59.163 34.615 0.00 0.00 32.61 2.66
2446 3584 7.145323 CCCCAAGTCAAATACACTTAACTTTG 58.855 38.462 0.00 0.00 32.61 2.77
2447 3585 7.145323 CCCAAGTCAAATACACTTAACTTTGG 58.855 38.462 0.00 0.00 32.61 3.28
2448 3586 7.013846 CCCAAGTCAAATACACTTAACTTTGGA 59.986 37.037 0.00 0.00 33.58 3.53
2449 3587 8.076178 CCAAGTCAAATACACTTAACTTTGGAG 58.924 37.037 0.00 0.00 32.61 3.86
2450 3588 8.621286 CAAGTCAAATACACTTAACTTTGGAGT 58.379 33.333 0.00 0.00 32.64 3.85
2452 3590 9.185680 AGTCAAATACACTTAACTTTGGAGTTT 57.814 29.630 0.00 0.00 43.48 2.66
2453 3591 9.797556 GTCAAATACACTTAACTTTGGAGTTTT 57.202 29.630 0.00 0.00 43.48 2.43
2477 3615 7.499321 TTTTTGAATGAGCTACCGTAAAAGA 57.501 32.000 0.00 0.00 0.00 2.52
2478 3616 7.499321 TTTTGAATGAGCTACCGTAAAAGAA 57.501 32.000 0.00 0.00 0.00 2.52
2479 3617 6.721571 TTGAATGAGCTACCGTAAAAGAAG 57.278 37.500 0.00 0.00 0.00 2.85
2480 3618 6.032956 TGAATGAGCTACCGTAAAAGAAGA 57.967 37.500 0.00 0.00 0.00 2.87
2481 3619 6.460781 TGAATGAGCTACCGTAAAAGAAGAA 58.539 36.000 0.00 0.00 0.00 2.52
2482 3620 6.932400 TGAATGAGCTACCGTAAAAGAAGAAA 59.068 34.615 0.00 0.00 0.00 2.52
2483 3621 7.606456 TGAATGAGCTACCGTAAAAGAAGAAAT 59.394 33.333 0.00 0.00 0.00 2.17
2484 3622 7.923414 ATGAGCTACCGTAAAAGAAGAAATT 57.077 32.000 0.00 0.00 0.00 1.82
2485 3623 7.360575 TGAGCTACCGTAAAAGAAGAAATTC 57.639 36.000 0.00 0.00 0.00 2.17
2486 3624 6.370718 TGAGCTACCGTAAAAGAAGAAATTCC 59.629 38.462 0.00 0.00 0.00 3.01
2487 3625 6.473758 AGCTACCGTAAAAGAAGAAATTCCT 58.526 36.000 0.00 0.00 0.00 3.36
2488 3626 6.940867 AGCTACCGTAAAAGAAGAAATTCCTT 59.059 34.615 0.00 0.00 0.00 3.36
2489 3627 8.098912 AGCTACCGTAAAAGAAGAAATTCCTTA 58.901 33.333 0.00 0.00 0.00 2.69
2490 3628 8.890718 GCTACCGTAAAAGAAGAAATTCCTTAT 58.109 33.333 0.00 0.00 0.00 1.73
2493 3631 9.292195 ACCGTAAAAGAAGAAATTCCTTATTGA 57.708 29.630 0.00 0.00 29.20 2.57
2551 3689 5.963586 GCTCTTATACAAAATGTACGTTGGC 59.036 40.000 0.00 0.00 35.42 4.52
2713 5155 6.233434 CACAGCTCACATTATGGGTACATAT 58.767 40.000 0.00 0.00 39.22 1.78
2778 5220 1.607628 ACCATAGTCGACGTCTATGCC 59.392 52.381 26.58 0.00 41.69 4.40
2782 5224 1.939785 GTCGACGTCTATGCCGCAG 60.940 63.158 14.70 0.00 0.00 5.18
2791 5233 0.041839 CTATGCCGCAGAACAATCGC 60.042 55.000 0.00 0.00 0.00 4.58
2792 5234 0.742635 TATGCCGCAGAACAATCGCA 60.743 50.000 0.00 0.00 0.00 5.10
2833 5284 0.992431 AGGGGCAGATGAGGAAGCAT 60.992 55.000 0.00 0.00 0.00 3.79
2835 5286 1.453762 GGGCAGATGAGGAAGCATGC 61.454 60.000 10.51 10.51 0.00 4.06
2836 5287 0.750546 GGCAGATGAGGAAGCATGCA 60.751 55.000 21.98 0.00 0.00 3.96
2842 5293 1.153005 GAGGAAGCATGCAGAGGGG 60.153 63.158 21.98 0.00 0.00 4.79
2843 5294 1.617536 AGGAAGCATGCAGAGGGGA 60.618 57.895 21.98 0.00 0.00 4.81
2844 5295 1.153005 GGAAGCATGCAGAGGGGAG 60.153 63.158 21.98 0.00 0.00 4.30
2845 5296 1.153005 GAAGCATGCAGAGGGGAGG 60.153 63.158 21.98 0.00 0.00 4.30
2846 5297 1.617536 AAGCATGCAGAGGGGAGGA 60.618 57.895 21.98 0.00 0.00 3.71
2847 5298 1.633915 AAGCATGCAGAGGGGAGGAG 61.634 60.000 21.98 0.00 0.00 3.69
2848 5299 3.117452 GCATGCAGAGGGGAGGAGG 62.117 68.421 14.21 0.00 0.00 4.30
2849 5300 2.040043 ATGCAGAGGGGAGGAGGG 60.040 66.667 0.00 0.00 0.00 4.30
2854 5305 4.565850 GAGGGGAGGAGGGCCGAT 62.566 72.222 0.00 0.00 39.96 4.18
2855 5306 4.888325 AGGGGAGGAGGGCCGATG 62.888 72.222 0.00 0.00 39.96 3.84
3083 5534 4.954933 CCTGGAATGTACCCGGTG 57.045 61.111 0.00 0.00 31.15 4.94
3084 5535 1.451387 CCTGGAATGTACCCGGTGC 60.451 63.158 0.00 0.00 31.15 5.01
3085 5536 1.298340 CTGGAATGTACCCGGTGCA 59.702 57.895 11.08 11.08 32.05 4.57
3086 5537 1.003112 TGGAATGTACCCGGTGCAC 60.003 57.895 10.89 8.80 29.98 4.57
3087 5538 1.747745 GGAATGTACCCGGTGCACC 60.748 63.158 26.78 26.78 29.98 5.01
3100 5551 4.362476 GCACCGGCTGCCCAAAAG 62.362 66.667 14.12 0.00 40.42 2.27
3101 5552 2.912025 CACCGGCTGCCCAAAAGT 60.912 61.111 14.12 0.00 0.00 2.66
3102 5553 2.123468 ACCGGCTGCCCAAAAGTT 60.123 55.556 14.12 0.00 0.00 2.66
3103 5554 1.151908 ACCGGCTGCCCAAAAGTTA 59.848 52.632 14.12 0.00 0.00 2.24
3104 5555 1.176619 ACCGGCTGCCCAAAAGTTAC 61.177 55.000 14.12 0.00 0.00 2.50
3105 5556 1.584495 CGGCTGCCCAAAAGTTACC 59.416 57.895 14.12 0.00 0.00 2.85
3106 5557 1.175983 CGGCTGCCCAAAAGTTACCA 61.176 55.000 14.12 0.00 0.00 3.25
3107 5558 1.266178 GGCTGCCCAAAAGTTACCAT 58.734 50.000 7.66 0.00 0.00 3.55
3108 5559 2.452505 GGCTGCCCAAAAGTTACCATA 58.547 47.619 7.66 0.00 0.00 2.74
3109 5560 2.829120 GGCTGCCCAAAAGTTACCATAA 59.171 45.455 7.66 0.00 0.00 1.90
3110 5561 3.259625 GGCTGCCCAAAAGTTACCATAAA 59.740 43.478 7.66 0.00 0.00 1.40
3111 5562 4.262678 GGCTGCCCAAAAGTTACCATAAAA 60.263 41.667 7.66 0.00 0.00 1.52
3112 5563 5.301555 GCTGCCCAAAAGTTACCATAAAAA 58.698 37.500 0.00 0.00 0.00 1.94
3113 5564 5.937540 GCTGCCCAAAAGTTACCATAAAAAT 59.062 36.000 0.00 0.00 0.00 1.82
3114 5565 6.128309 GCTGCCCAAAAGTTACCATAAAAATG 60.128 38.462 0.00 0.00 0.00 2.32
3115 5566 6.831976 TGCCCAAAAGTTACCATAAAAATGT 58.168 32.000 0.00 0.00 0.00 2.71
3116 5567 6.708054 TGCCCAAAAGTTACCATAAAAATGTG 59.292 34.615 0.00 0.00 0.00 3.21
3117 5568 6.148645 GCCCAAAAGTTACCATAAAAATGTGG 59.851 38.462 0.00 0.00 41.35 4.17
3118 5569 7.445945 CCCAAAAGTTACCATAAAAATGTGGA 58.554 34.615 0.00 0.00 38.86 4.02
3119 5570 7.934120 CCCAAAAGTTACCATAAAAATGTGGAA 59.066 33.333 0.00 0.00 38.86 3.53
3120 5571 9.331282 CCAAAAGTTACCATAAAAATGTGGAAA 57.669 29.630 0.00 0.00 38.86 3.13
3145 5596 8.880878 AATATAAAAATAATTTGGCACGTCCC 57.119 30.769 0.00 0.00 0.00 4.46
3146 5597 3.603158 AAAATAATTTGGCACGTCCCC 57.397 42.857 0.00 0.00 0.00 4.81
3147 5598 2.223803 AATAATTTGGCACGTCCCCA 57.776 45.000 0.00 0.00 0.00 4.96
3148 5599 2.452600 ATAATTTGGCACGTCCCCAT 57.547 45.000 5.37 0.00 31.26 4.00
3149 5600 3.586470 ATAATTTGGCACGTCCCCATA 57.414 42.857 5.37 1.91 31.26 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.168604 CACGCGAGCTCGACACAG 61.169 66.667 38.74 23.39 43.02 3.66
4 5 3.595108 CTCACGCGAGCTCGACACA 62.595 63.158 38.74 17.85 43.02 3.72
5 6 2.872001 CTCACGCGAGCTCGACAC 60.872 66.667 38.74 20.29 43.02 3.67
6 7 4.103103 CCTCACGCGAGCTCGACA 62.103 66.667 38.74 17.15 43.02 4.35
7 8 3.726631 CTCCTCACGCGAGCTCGAC 62.727 68.421 38.74 26.70 43.02 4.20
8 9 3.500642 CTCCTCACGCGAGCTCGA 61.501 66.667 38.74 17.51 43.02 4.04
9 10 4.544689 CCTCCTCACGCGAGCTCG 62.545 72.222 31.37 31.37 38.00 5.03
10 11 1.654954 TTACCTCCTCACGCGAGCTC 61.655 60.000 15.93 2.73 38.00 4.09
11 12 1.038130 ATTACCTCCTCACGCGAGCT 61.038 55.000 15.93 0.00 38.00 4.09
12 13 0.595310 GATTACCTCCTCACGCGAGC 60.595 60.000 15.93 0.00 38.00 5.03
13 14 0.030908 GGATTACCTCCTCACGCGAG 59.969 60.000 15.93 4.59 41.29 5.03
14 15 0.681887 TGGATTACCTCCTCACGCGA 60.682 55.000 15.93 0.00 45.21 5.87
15 16 0.389391 ATGGATTACCTCCTCACGCG 59.611 55.000 3.53 3.53 45.21 6.01
16 17 1.412710 TGATGGATTACCTCCTCACGC 59.587 52.381 0.00 0.00 45.21 5.34
17 18 4.342862 AATGATGGATTACCTCCTCACG 57.657 45.455 0.00 0.00 45.21 4.35
39 40 4.040217 CCACATCATCCACCAAAGGAAAAA 59.960 41.667 0.00 0.00 41.92 1.94
40 41 3.577848 CCACATCATCCACCAAAGGAAAA 59.422 43.478 0.00 0.00 41.92 2.29
41 42 3.164268 CCACATCATCCACCAAAGGAAA 58.836 45.455 0.00 0.00 41.92 3.13
42 43 2.109834 ACCACATCATCCACCAAAGGAA 59.890 45.455 0.00 0.00 41.92 3.36
43 44 1.710244 ACCACATCATCCACCAAAGGA 59.290 47.619 0.00 0.00 43.01 3.36
44 45 1.820519 CACCACATCATCCACCAAAGG 59.179 52.381 0.00 0.00 0.00 3.11
45 46 1.820519 CCACCACATCATCCACCAAAG 59.179 52.381 0.00 0.00 0.00 2.77
46 47 1.146774 ACCACCACATCATCCACCAAA 59.853 47.619 0.00 0.00 0.00 3.28
47 48 0.776810 ACCACCACATCATCCACCAA 59.223 50.000 0.00 0.00 0.00 3.67
48 49 1.280710 GTACCACCACATCATCCACCA 59.719 52.381 0.00 0.00 0.00 4.17
49 50 1.408266 GGTACCACCACATCATCCACC 60.408 57.143 7.15 0.00 38.42 4.61
50 51 1.280710 TGGTACCACCACATCATCCAC 59.719 52.381 11.60 0.00 44.79 4.02
51 52 1.559219 CTGGTACCACCACATCATCCA 59.441 52.381 11.60 0.00 44.79 3.41
52 53 1.837439 TCTGGTACCACCACATCATCC 59.163 52.381 11.60 0.00 44.79 3.51
53 54 2.158900 CCTCTGGTACCACCACATCATC 60.159 54.545 11.60 0.00 44.79 2.92
54 55 1.839994 CCTCTGGTACCACCACATCAT 59.160 52.381 11.60 0.00 44.79 2.45
55 56 1.275666 CCTCTGGTACCACCACATCA 58.724 55.000 11.60 0.00 44.79 3.07
56 57 0.107654 GCCTCTGGTACCACCACATC 60.108 60.000 11.60 0.00 44.79 3.06
57 58 0.840288 TGCCTCTGGTACCACCACAT 60.840 55.000 11.60 0.00 44.79 3.21
58 59 1.460497 TGCCTCTGGTACCACCACA 60.460 57.895 11.60 4.23 44.79 4.17
59 60 1.296715 CTGCCTCTGGTACCACCAC 59.703 63.158 11.60 1.34 44.79 4.16
61 62 0.616679 TACCTGCCTCTGGTACCACC 60.617 60.000 11.60 0.23 36.99 4.61
62 63 0.824759 CTACCTGCCTCTGGTACCAC 59.175 60.000 11.60 1.28 36.99 4.16
63 64 0.976073 GCTACCTGCCTCTGGTACCA 60.976 60.000 15.39 15.39 36.99 3.25
64 65 1.823976 GCTACCTGCCTCTGGTACC 59.176 63.158 4.43 4.43 36.99 3.34
65 66 1.437986 CGCTACCTGCCTCTGGTAC 59.562 63.158 0.00 0.00 36.99 3.34
66 67 1.756950 CCGCTACCTGCCTCTGGTA 60.757 63.158 3.22 3.22 36.99 3.25
67 68 3.077556 CCGCTACCTGCCTCTGGT 61.078 66.667 1.21 1.21 39.06 4.00
68 69 3.854669 CCCGCTACCTGCCTCTGG 61.855 72.222 0.00 0.00 38.78 3.86
69 70 4.537433 GCCCGCTACCTGCCTCTG 62.537 72.222 0.00 0.00 38.78 3.35
74 75 4.752879 TCAACGCCCGCTACCTGC 62.753 66.667 0.00 0.00 38.57 4.85
75 76 2.173669 CATCAACGCCCGCTACCTG 61.174 63.158 0.00 0.00 0.00 4.00
76 77 2.186903 CATCAACGCCCGCTACCT 59.813 61.111 0.00 0.00 0.00 3.08
77 78 2.125269 ACATCAACGCCCGCTACC 60.125 61.111 0.00 0.00 0.00 3.18
78 79 0.810031 ATGACATCAACGCCCGCTAC 60.810 55.000 0.00 0.00 0.00 3.58
79 80 0.809636 CATGACATCAACGCCCGCTA 60.810 55.000 0.00 0.00 0.00 4.26
80 81 2.108514 CATGACATCAACGCCCGCT 61.109 57.895 0.00 0.00 0.00 5.52
81 82 1.922135 AACATGACATCAACGCCCGC 61.922 55.000 0.00 0.00 0.00 6.13
82 83 0.096976 GAACATGACATCAACGCCCG 59.903 55.000 0.00 0.00 0.00 6.13
83 84 1.131126 CTGAACATGACATCAACGCCC 59.869 52.381 0.00 0.00 0.00 6.13
84 85 2.076100 TCTGAACATGACATCAACGCC 58.924 47.619 0.00 0.00 0.00 5.68
85 86 2.094894 CCTCTGAACATGACATCAACGC 59.905 50.000 0.00 0.00 0.00 4.84
86 87 3.588955 TCCTCTGAACATGACATCAACG 58.411 45.455 0.00 0.00 0.00 4.10
87 88 5.879223 AGAATCCTCTGAACATGACATCAAC 59.121 40.000 0.00 0.00 0.00 3.18
88 89 6.058553 AGAATCCTCTGAACATGACATCAA 57.941 37.500 0.00 0.00 0.00 2.57
89 90 5.688814 AGAATCCTCTGAACATGACATCA 57.311 39.130 0.00 0.00 0.00 3.07
90 91 5.233902 CGAAGAATCCTCTGAACATGACATC 59.766 44.000 0.00 0.00 30.03 3.06
91 92 5.114780 CGAAGAATCCTCTGAACATGACAT 58.885 41.667 0.00 0.00 30.03 3.06
92 93 4.498241 CGAAGAATCCTCTGAACATGACA 58.502 43.478 0.00 0.00 30.03 3.58
93 94 3.868077 CCGAAGAATCCTCTGAACATGAC 59.132 47.826 0.00 0.00 30.03 3.06
94 95 3.515502 ACCGAAGAATCCTCTGAACATGA 59.484 43.478 0.00 0.00 30.03 3.07
95 96 3.866651 ACCGAAGAATCCTCTGAACATG 58.133 45.455 0.00 0.00 30.03 3.21
96 97 3.772025 AGACCGAAGAATCCTCTGAACAT 59.228 43.478 0.00 0.00 30.03 2.71
97 98 3.165875 AGACCGAAGAATCCTCTGAACA 58.834 45.455 0.00 0.00 30.03 3.18
98 99 3.878160 AGACCGAAGAATCCTCTGAAC 57.122 47.619 0.00 0.00 30.03 3.18
99 100 3.832490 TCAAGACCGAAGAATCCTCTGAA 59.168 43.478 0.00 0.00 30.03 3.02
100 101 3.431415 TCAAGACCGAAGAATCCTCTGA 58.569 45.455 0.00 0.00 30.03 3.27
101 102 3.876274 TCAAGACCGAAGAATCCTCTG 57.124 47.619 0.00 0.00 30.03 3.35
102 103 4.223923 ACAATCAAGACCGAAGAATCCTCT 59.776 41.667 0.00 0.00 0.00 3.69
103 104 4.508662 ACAATCAAGACCGAAGAATCCTC 58.491 43.478 0.00 0.00 0.00 3.71
104 105 4.559862 ACAATCAAGACCGAAGAATCCT 57.440 40.909 0.00 0.00 0.00 3.24
105 106 6.927294 AATACAATCAAGACCGAAGAATCC 57.073 37.500 0.00 0.00 0.00 3.01
108 109 9.280174 AGTAAAAATACAATCAAGACCGAAGAA 57.720 29.630 0.00 0.00 0.00 2.52
109 110 8.842358 AGTAAAAATACAATCAAGACCGAAGA 57.158 30.769 0.00 0.00 0.00 2.87
110 111 9.543018 GAAGTAAAAATACAATCAAGACCGAAG 57.457 33.333 0.00 0.00 0.00 3.79
111 112 9.280174 AGAAGTAAAAATACAATCAAGACCGAA 57.720 29.630 0.00 0.00 0.00 4.30
112 113 8.842358 AGAAGTAAAAATACAATCAAGACCGA 57.158 30.769 0.00 0.00 0.00 4.69
113 114 9.329913 CAAGAAGTAAAAATACAATCAAGACCG 57.670 33.333 0.00 0.00 0.00 4.79
114 115 9.626045 CCAAGAAGTAAAAATACAATCAAGACC 57.374 33.333 0.00 0.00 0.00 3.85
123 124 9.959749 GATCAACAACCAAGAAGTAAAAATACA 57.040 29.630 0.00 0.00 0.00 2.29
124 125 9.959749 TGATCAACAACCAAGAAGTAAAAATAC 57.040 29.630 0.00 0.00 0.00 1.89
126 127 9.480053 CATGATCAACAACCAAGAAGTAAAAAT 57.520 29.630 0.00 0.00 0.00 1.82
127 128 8.474025 ACATGATCAACAACCAAGAAGTAAAAA 58.526 29.630 0.00 0.00 0.00 1.94
128 129 7.920151 CACATGATCAACAACCAAGAAGTAAAA 59.080 33.333 0.00 0.00 0.00 1.52
129 130 7.068103 ACACATGATCAACAACCAAGAAGTAAA 59.932 33.333 0.00 0.00 0.00 2.01
130 131 6.545666 ACACATGATCAACAACCAAGAAGTAA 59.454 34.615 0.00 0.00 0.00 2.24
131 132 6.017192 CACACATGATCAACAACCAAGAAGTA 60.017 38.462 0.00 0.00 0.00 2.24
132 133 4.889409 ACACATGATCAACAACCAAGAAGT 59.111 37.500 0.00 0.00 0.00 3.01
133 134 5.217393 CACACATGATCAACAACCAAGAAG 58.783 41.667 0.00 0.00 0.00 2.85
134 135 4.644234 ACACACATGATCAACAACCAAGAA 59.356 37.500 0.00 0.00 0.00 2.52
135 136 4.206375 ACACACATGATCAACAACCAAGA 58.794 39.130 0.00 0.00 0.00 3.02
136 137 4.572985 ACACACATGATCAACAACCAAG 57.427 40.909 0.00 0.00 0.00 3.61
137 138 6.319911 TCTTTACACACATGATCAACAACCAA 59.680 34.615 0.00 0.00 0.00 3.67
138 139 5.825151 TCTTTACACACATGATCAACAACCA 59.175 36.000 0.00 0.00 0.00 3.67
139 140 6.017109 AGTCTTTACACACATGATCAACAACC 60.017 38.462 0.00 0.00 0.00 3.77
140 141 6.959361 AGTCTTTACACACATGATCAACAAC 58.041 36.000 0.00 0.00 0.00 3.32
141 142 8.556194 GTTAGTCTTTACACACATGATCAACAA 58.444 33.333 0.00 0.00 0.00 2.83
142 143 7.713073 TGTTAGTCTTTACACACATGATCAACA 59.287 33.333 0.00 0.00 0.00 3.33
143 144 8.083462 TGTTAGTCTTTACACACATGATCAAC 57.917 34.615 0.00 0.00 0.00 3.18
144 145 8.846943 ATGTTAGTCTTTACACACATGATCAA 57.153 30.769 0.00 0.00 32.26 2.57
145 146 8.846943 AATGTTAGTCTTTACACACATGATCA 57.153 30.769 0.00 0.00 33.23 2.92
146 147 9.155975 AGAATGTTAGTCTTTACACACATGATC 57.844 33.333 0.00 0.00 33.23 2.92
147 148 8.939929 CAGAATGTTAGTCTTTACACACATGAT 58.060 33.333 0.00 0.00 33.23 2.45
148 149 7.095229 GCAGAATGTTAGTCTTTACACACATGA 60.095 37.037 0.00 0.00 39.31 3.07
149 150 7.017645 GCAGAATGTTAGTCTTTACACACATG 58.982 38.462 0.00 0.00 39.31 3.21
150 151 6.936900 AGCAGAATGTTAGTCTTTACACACAT 59.063 34.615 0.00 0.00 39.31 3.21
151 152 6.202762 CAGCAGAATGTTAGTCTTTACACACA 59.797 38.462 0.00 0.00 39.31 3.72
152 153 6.202954 ACAGCAGAATGTTAGTCTTTACACAC 59.797 38.462 0.00 0.00 39.31 3.82
153 154 6.288294 ACAGCAGAATGTTAGTCTTTACACA 58.712 36.000 0.00 0.00 39.31 3.72
154 155 6.647067 AGACAGCAGAATGTTAGTCTTTACAC 59.353 38.462 0.00 0.00 35.48 2.90
155 156 6.759272 AGACAGCAGAATGTTAGTCTTTACA 58.241 36.000 0.00 0.00 35.48 2.41
156 157 7.659652 AAGACAGCAGAATGTTAGTCTTTAC 57.340 36.000 0.00 0.00 41.13 2.01
157 158 9.587772 GATAAGACAGCAGAATGTTAGTCTTTA 57.412 33.333 10.39 0.00 41.13 1.85
158 159 8.097038 TGATAAGACAGCAGAATGTTAGTCTTT 58.903 33.333 10.39 0.76 41.13 2.52
159 160 7.615403 TGATAAGACAGCAGAATGTTAGTCTT 58.385 34.615 10.06 10.06 43.67 3.01
160 161 7.175347 TGATAAGACAGCAGAATGTTAGTCT 57.825 36.000 0.00 0.00 38.51 3.24
161 162 7.834068 TTGATAAGACAGCAGAATGTTAGTC 57.166 36.000 0.00 0.00 39.31 2.59
162 163 8.798859 AATTGATAAGACAGCAGAATGTTAGT 57.201 30.769 0.00 0.00 39.31 2.24
163 164 9.107177 AGAATTGATAAGACAGCAGAATGTTAG 57.893 33.333 0.00 0.00 39.31 2.34
165 166 7.934855 AGAATTGATAAGACAGCAGAATGTT 57.065 32.000 0.00 0.00 39.31 2.71
166 167 9.270640 GATAGAATTGATAAGACAGCAGAATGT 57.729 33.333 0.00 0.00 39.31 2.71
167 168 9.269453 TGATAGAATTGATAAGACAGCAGAATG 57.731 33.333 0.00 0.00 40.87 2.67
168 169 9.270640 GTGATAGAATTGATAAGACAGCAGAAT 57.729 33.333 0.00 0.00 0.00 2.40
169 170 7.436376 CGTGATAGAATTGATAAGACAGCAGAA 59.564 37.037 0.00 0.00 0.00 3.02
170 171 6.920210 CGTGATAGAATTGATAAGACAGCAGA 59.080 38.462 0.00 0.00 0.00 4.26
171 172 6.699204 ACGTGATAGAATTGATAAGACAGCAG 59.301 38.462 0.00 0.00 0.00 4.24
172 173 6.476706 CACGTGATAGAATTGATAAGACAGCA 59.523 38.462 10.90 0.00 0.00 4.41
173 174 6.074088 CCACGTGATAGAATTGATAAGACAGC 60.074 42.308 19.30 0.00 0.00 4.40
174 175 6.422100 CCCACGTGATAGAATTGATAAGACAG 59.578 42.308 19.30 0.00 0.00 3.51
175 176 6.127168 ACCCACGTGATAGAATTGATAAGACA 60.127 38.462 19.30 0.00 0.00 3.41
176 177 6.281405 ACCCACGTGATAGAATTGATAAGAC 58.719 40.000 19.30 0.00 0.00 3.01
177 178 6.323996 AGACCCACGTGATAGAATTGATAAGA 59.676 38.462 19.30 0.00 0.00 2.10
178 179 6.516718 AGACCCACGTGATAGAATTGATAAG 58.483 40.000 19.30 0.00 0.00 1.73
179 180 6.479972 AGACCCACGTGATAGAATTGATAA 57.520 37.500 19.30 0.00 0.00 1.75
180 181 6.479972 AAGACCCACGTGATAGAATTGATA 57.520 37.500 19.30 0.00 0.00 2.15
181 182 5.359194 AAGACCCACGTGATAGAATTGAT 57.641 39.130 19.30 0.00 0.00 2.57
182 183 4.819105 AAGACCCACGTGATAGAATTGA 57.181 40.909 19.30 0.00 0.00 2.57
183 184 4.437390 GCAAAGACCCACGTGATAGAATTG 60.437 45.833 19.30 14.85 0.00 2.32
184 185 3.689649 GCAAAGACCCACGTGATAGAATT 59.310 43.478 19.30 1.85 0.00 2.17
185 186 3.270877 GCAAAGACCCACGTGATAGAAT 58.729 45.455 19.30 0.00 0.00 2.40
186 187 2.037902 TGCAAAGACCCACGTGATAGAA 59.962 45.455 19.30 0.00 0.00 2.10
187 188 1.621317 TGCAAAGACCCACGTGATAGA 59.379 47.619 19.30 0.00 0.00 1.98
188 189 2.093306 TGCAAAGACCCACGTGATAG 57.907 50.000 19.30 7.92 0.00 2.08
189 190 2.027653 TCATGCAAAGACCCACGTGATA 60.028 45.455 19.30 0.00 0.00 2.15
190 191 1.167851 CATGCAAAGACCCACGTGAT 58.832 50.000 19.30 4.23 0.00 3.06
191 192 0.107643 TCATGCAAAGACCCACGTGA 59.892 50.000 19.30 0.00 0.00 4.35
192 193 0.238289 GTCATGCAAAGACCCACGTG 59.762 55.000 9.08 9.08 0.00 4.49
193 194 0.108585 AGTCATGCAAAGACCCACGT 59.891 50.000 16.35 0.00 36.68 4.49
194 195 1.069022 CAAGTCATGCAAAGACCCACG 60.069 52.381 16.35 2.70 36.68 4.94
195 196 1.956477 ACAAGTCATGCAAAGACCCAC 59.044 47.619 16.35 0.00 36.68 4.61
196 197 2.363306 ACAAGTCATGCAAAGACCCA 57.637 45.000 16.35 0.00 36.68 4.51
197 198 6.318648 TCATAATACAAGTCATGCAAAGACCC 59.681 38.462 16.35 0.00 36.68 4.46
198 199 7.320443 TCATAATACAAGTCATGCAAAGACC 57.680 36.000 16.35 2.69 36.68 3.85
199 200 9.793252 AAATCATAATACAAGTCATGCAAAGAC 57.207 29.630 13.16 13.16 36.26 3.01
220 221 9.961266 CGTGTCTCGTTTATATTGTAAAAATCA 57.039 29.630 0.00 0.00 34.52 2.57
238 239 5.337554 TCTTTCATGGTAATACGTGTCTCG 58.662 41.667 0.00 0.00 46.00 4.04
239 240 7.591006 TTTCTTTCATGGTAATACGTGTCTC 57.409 36.000 0.00 0.00 0.00 3.36
240 241 7.119262 CCTTTTCTTTCATGGTAATACGTGTCT 59.881 37.037 0.00 0.00 0.00 3.41
241 242 7.241376 CCTTTTCTTTCATGGTAATACGTGTC 58.759 38.462 0.00 0.00 0.00 3.67
242 243 6.349033 GCCTTTTCTTTCATGGTAATACGTGT 60.349 38.462 0.00 0.00 0.00 4.49
243 244 6.027749 GCCTTTTCTTTCATGGTAATACGTG 58.972 40.000 0.00 0.00 0.00 4.49
244 245 5.944007 AGCCTTTTCTTTCATGGTAATACGT 59.056 36.000 0.00 0.00 0.00 3.57
245 246 6.093495 TCAGCCTTTTCTTTCATGGTAATACG 59.907 38.462 0.00 0.00 0.00 3.06
246 247 7.391148 TCAGCCTTTTCTTTCATGGTAATAC 57.609 36.000 0.00 0.00 0.00 1.89
247 248 8.593945 AATCAGCCTTTTCTTTCATGGTAATA 57.406 30.769 0.00 0.00 0.00 0.98
248 249 7.178983 TGAATCAGCCTTTTCTTTCATGGTAAT 59.821 33.333 0.00 0.00 0.00 1.89
249 250 6.493115 TGAATCAGCCTTTTCTTTCATGGTAA 59.507 34.615 0.00 0.00 0.00 2.85
250 251 6.009589 TGAATCAGCCTTTTCTTTCATGGTA 58.990 36.000 0.00 0.00 0.00 3.25
251 252 4.834496 TGAATCAGCCTTTTCTTTCATGGT 59.166 37.500 0.00 0.00 0.00 3.55
252 253 5.395682 TGAATCAGCCTTTTCTTTCATGG 57.604 39.130 0.00 0.00 0.00 3.66
253 254 5.810587 CCATGAATCAGCCTTTTCTTTCATG 59.189 40.000 13.71 13.71 44.92 3.07
254 255 5.105064 CCCATGAATCAGCCTTTTCTTTCAT 60.105 40.000 0.00 0.00 34.94 2.57
255 256 4.221262 CCCATGAATCAGCCTTTTCTTTCA 59.779 41.667 0.00 0.00 0.00 2.69
256 257 4.752146 CCCATGAATCAGCCTTTTCTTTC 58.248 43.478 0.00 0.00 0.00 2.62
257 258 3.055602 GCCCATGAATCAGCCTTTTCTTT 60.056 43.478 0.00 0.00 0.00 2.52
258 259 2.498885 GCCCATGAATCAGCCTTTTCTT 59.501 45.455 0.00 0.00 0.00 2.52
259 260 2.105766 GCCCATGAATCAGCCTTTTCT 58.894 47.619 0.00 0.00 0.00 2.52
260 261 1.137675 GGCCCATGAATCAGCCTTTTC 59.862 52.381 4.92 0.00 42.34 2.29
261 262 1.197812 GGCCCATGAATCAGCCTTTT 58.802 50.000 4.92 0.00 42.34 2.27
262 263 0.041535 TGGCCCATGAATCAGCCTTT 59.958 50.000 12.30 0.00 45.94 3.11
263 264 0.396695 CTGGCCCATGAATCAGCCTT 60.397 55.000 12.30 0.00 45.94 4.35
264 265 1.229359 CTGGCCCATGAATCAGCCT 59.771 57.895 12.30 0.00 45.94 4.58
265 266 2.496291 GCTGGCCCATGAATCAGCC 61.496 63.158 17.46 5.18 44.70 4.85
334 343 2.610433 CGAGTCAAGCAGCACTCATTA 58.390 47.619 10.98 0.00 39.29 1.90
361 371 3.282885 CCTGCCTGGATAACTCCTTTTC 58.717 50.000 0.00 0.00 42.59 2.29
521 1462 2.361610 GTGCATGGGTGGGGTCAG 60.362 66.667 0.00 0.00 0.00 3.51
522 1463 3.181530 TGTGCATGGGTGGGGTCA 61.182 61.111 0.00 0.00 0.00 4.02
523 1464 2.361610 CTGTGCATGGGTGGGGTC 60.362 66.667 0.00 0.00 0.00 4.46
524 1465 4.684134 GCTGTGCATGGGTGGGGT 62.684 66.667 0.00 0.00 0.00 4.95
528 1469 1.514087 GATTGGCTGTGCATGGGTG 59.486 57.895 0.00 0.00 0.00 4.61
543 1489 2.358247 GTGCACGTCACGGGGATT 60.358 61.111 0.00 0.00 30.85 3.01
562 1508 2.729491 CGCGCAGAGACGTGTTGA 60.729 61.111 8.75 0.00 38.69 3.18
578 1525 5.624344 TTCCTCGAGTATTATAAGAGGCG 57.376 43.478 12.31 4.58 45.90 5.52
579 1526 7.697291 CGTATTTCCTCGAGTATTATAAGAGGC 59.303 40.741 12.31 0.07 45.90 4.70
629 1598 2.719739 CCTTGCACTGAATCATGTCCT 58.280 47.619 0.00 0.00 0.00 3.85
630 1599 1.133790 GCCTTGCACTGAATCATGTCC 59.866 52.381 0.00 0.00 0.00 4.02
631 1600 1.814394 TGCCTTGCACTGAATCATGTC 59.186 47.619 0.00 0.00 31.71 3.06
632 1601 1.816835 CTGCCTTGCACTGAATCATGT 59.183 47.619 0.00 0.00 33.79 3.21
633 1602 1.134367 CCTGCCTTGCACTGAATCATG 59.866 52.381 0.00 0.00 33.79 3.07
690 1660 0.944311 CTTGGCACGACGCTAACTGT 60.944 55.000 0.00 0.00 41.91 3.55
774 1751 6.090763 CGAAGTGCTACATACAAAGTTCATGA 59.909 38.462 0.00 0.00 0.00 3.07
788 1765 2.924903 CACGTTCTACGAAGTGCTACA 58.075 47.619 6.19 0.00 46.05 2.74
795 1772 1.578023 GATCACGCACGTTCTACGAAG 59.422 52.381 6.19 0.00 46.05 3.79
803 1785 1.282248 CTGTTCCGATCACGCACGTT 61.282 55.000 0.00 0.00 38.29 3.99
844 1833 3.905678 CAGGAGTCTAGCCCGCGG 61.906 72.222 21.04 21.04 0.00 6.46
863 1852 2.862223 GCTGACCGCCTAGGCCTAG 61.862 68.421 30.05 30.05 46.52 3.02
864 1853 2.838225 GCTGACCGCCTAGGCCTA 60.838 66.667 28.09 13.09 46.52 3.93
867 1856 4.874977 GACGCTGACCGCCTAGGC 62.875 72.222 24.75 24.75 46.52 3.93
965 1963 1.063616 TGATGCGACGTGACTAGCTAC 59.936 52.381 0.00 0.00 0.00 3.58
1086 2094 2.478879 GCAAGACCTCGAGTAGAAGCTC 60.479 54.545 12.31 0.00 0.00 4.09
1136 2144 2.125512 GCAACGCCGAGGTCATCT 60.126 61.111 0.00 0.00 0.00 2.90
1203 2211 1.592064 TGCTCACATTGACGAAGCAA 58.408 45.000 0.00 0.00 0.00 3.91
1252 2260 7.212274 ACACCATTAAACGTCAGTACTTAACT 58.788 34.615 0.00 0.00 39.81 2.24
1254 2262 8.436046 AAACACCATTAAACGTCAGTACTTAA 57.564 30.769 0.00 0.00 0.00 1.85
1452 2515 4.854784 GCGAGCGCGAGGATGTCA 62.855 66.667 15.92 0.00 40.82 3.58
1510 2616 0.659957 GTAGTAGTACGGGTCAGCGG 59.340 60.000 0.00 0.00 0.00 5.52
1539 2666 5.212934 GGCGCTATTCCAGTAAAAATAAGC 58.787 41.667 7.64 0.00 0.00 3.09
1804 2931 1.796253 CGCTCGTTGTAGATGCGGTTA 60.796 52.381 0.00 0.00 42.46 2.85
1900 3027 4.496670 GCGGTCTGCACGTCTAAT 57.503 55.556 0.00 0.00 45.45 1.73
1944 3071 2.991540 GCTGCCCCACAAGGTTCC 60.992 66.667 0.00 0.00 0.00 3.62
2128 3255 0.106015 AGTTGGGCTTCCTGCAGTTT 60.106 50.000 13.81 0.00 45.15 2.66
2158 3291 6.312918 TCAATCGTTATTTAGCACACTTCTCC 59.687 38.462 0.00 0.00 0.00 3.71
2159 3292 7.290857 TCAATCGTTATTTAGCACACTTCTC 57.709 36.000 0.00 0.00 0.00 2.87
2160 3293 7.677276 GCATCAATCGTTATTTAGCACACTTCT 60.677 37.037 0.00 0.00 0.00 2.85
2161 3294 6.412072 GCATCAATCGTTATTTAGCACACTTC 59.588 38.462 0.00 0.00 0.00 3.01
2177 3310 2.161410 TCGTTTTCCAAGGCATCAATCG 59.839 45.455 0.00 0.00 0.00 3.34
2197 3330 1.555075 TGAGTACCTGACCAATGCCTC 59.445 52.381 0.00 0.00 0.00 4.70
2213 3346 5.401531 ACATACAATACGTGAACCTGAGT 57.598 39.130 0.00 0.00 0.00 3.41
2238 3376 7.073265 CGTTTGTACATTCGGTGTTCTTTTAT 58.927 34.615 0.00 0.00 42.29 1.40
2239 3377 6.420588 CGTTTGTACATTCGGTGTTCTTTTA 58.579 36.000 0.00 0.00 42.29 1.52
2270 3408 1.893062 GTTTGCCCCAGATTGAGCC 59.107 57.895 0.00 0.00 0.00 4.70
2285 3423 6.366315 TGATACTTTGTAGTTTGCACGTTT 57.634 33.333 0.00 0.00 35.78 3.60
2315 3453 1.343465 CCTCAGACGTAACAGGGTGTT 59.657 52.381 0.00 0.00 43.88 3.32
2316 3454 0.966920 CCTCAGACGTAACAGGGTGT 59.033 55.000 0.00 0.00 0.00 4.16
2317 3455 0.246635 CCCTCAGACGTAACAGGGTG 59.753 60.000 14.56 0.00 40.89 4.61
2318 3456 0.113776 TCCCTCAGACGTAACAGGGT 59.886 55.000 19.77 0.00 45.45 4.34
2319 3457 1.486211 ATCCCTCAGACGTAACAGGG 58.514 55.000 16.08 16.08 46.50 4.45
2320 3458 4.401519 TCTTAATCCCTCAGACGTAACAGG 59.598 45.833 0.00 0.00 0.00 4.00
2321 3459 5.125739 AGTCTTAATCCCTCAGACGTAACAG 59.874 44.000 0.00 0.00 41.64 3.16
2322 3460 5.014858 AGTCTTAATCCCTCAGACGTAACA 58.985 41.667 0.00 0.00 41.64 2.41
2323 3461 5.341617 CAGTCTTAATCCCTCAGACGTAAC 58.658 45.833 0.00 0.00 41.64 2.50
2324 3462 4.401519 CCAGTCTTAATCCCTCAGACGTAA 59.598 45.833 0.00 0.00 41.64 3.18
2325 3463 3.952323 CCAGTCTTAATCCCTCAGACGTA 59.048 47.826 0.00 0.00 41.64 3.57
2326 3464 2.761208 CCAGTCTTAATCCCTCAGACGT 59.239 50.000 0.00 0.00 41.64 4.34
2327 3465 2.482142 GCCAGTCTTAATCCCTCAGACG 60.482 54.545 0.00 0.00 41.64 4.18
2328 3466 2.158885 GGCCAGTCTTAATCCCTCAGAC 60.159 54.545 0.00 0.00 37.76 3.51
2329 3467 2.119495 GGCCAGTCTTAATCCCTCAGA 58.881 52.381 0.00 0.00 0.00 3.27
2330 3468 1.141858 GGGCCAGTCTTAATCCCTCAG 59.858 57.143 4.39 0.00 34.19 3.35
2331 3469 1.213296 GGGCCAGTCTTAATCCCTCA 58.787 55.000 4.39 0.00 34.19 3.86
2332 3470 1.512735 AGGGCCAGTCTTAATCCCTC 58.487 55.000 6.18 0.00 43.53 4.30
2333 3471 3.761078 AGGGCCAGTCTTAATCCCT 57.239 52.632 6.18 0.00 42.25 4.20
2334 3472 2.124411 TGTAGGGCCAGTCTTAATCCC 58.876 52.381 6.18 0.00 37.24 3.85
2335 3473 3.926058 TTGTAGGGCCAGTCTTAATCC 57.074 47.619 6.18 0.00 0.00 3.01
2336 3474 4.395231 GTGTTTGTAGGGCCAGTCTTAATC 59.605 45.833 6.18 0.00 0.00 1.75
2337 3475 4.042934 AGTGTTTGTAGGGCCAGTCTTAAT 59.957 41.667 6.18 0.00 0.00 1.40
2338 3476 3.393278 AGTGTTTGTAGGGCCAGTCTTAA 59.607 43.478 6.18 0.00 0.00 1.85
2339 3477 2.976882 AGTGTTTGTAGGGCCAGTCTTA 59.023 45.455 6.18 0.00 0.00 2.10
2340 3478 1.774856 AGTGTTTGTAGGGCCAGTCTT 59.225 47.619 6.18 0.00 0.00 3.01
2341 3479 1.435256 AGTGTTTGTAGGGCCAGTCT 58.565 50.000 6.18 0.00 0.00 3.24
2342 3480 2.271944 AAGTGTTTGTAGGGCCAGTC 57.728 50.000 6.18 0.00 0.00 3.51
2343 3481 2.306847 CAAAGTGTTTGTAGGGCCAGT 58.693 47.619 6.18 0.00 35.94 4.00
2353 3491 4.790766 GCATGAGTGAGGACAAAGTGTTTG 60.791 45.833 0.00 0.00 45.95 2.93
2354 3492 3.316308 GCATGAGTGAGGACAAAGTGTTT 59.684 43.478 0.00 0.00 0.00 2.83
2355 3493 2.880890 GCATGAGTGAGGACAAAGTGTT 59.119 45.455 0.00 0.00 0.00 3.32
2356 3494 2.498167 GCATGAGTGAGGACAAAGTGT 58.502 47.619 0.00 0.00 0.00 3.55
2357 3495 1.462283 CGCATGAGTGAGGACAAAGTG 59.538 52.381 0.00 0.00 0.00 3.16
2358 3496 1.800805 CGCATGAGTGAGGACAAAGT 58.199 50.000 0.00 0.00 0.00 2.66
2359 3497 0.445436 GCGCATGAGTGAGGACAAAG 59.555 55.000 0.30 0.00 0.00 2.77
2360 3498 0.250252 TGCGCATGAGTGAGGACAAA 60.250 50.000 5.66 0.00 0.00 2.83
2361 3499 0.036105 ATGCGCATGAGTGAGGACAA 60.036 50.000 24.69 0.00 0.00 3.18
2362 3500 0.036105 AATGCGCATGAGTGAGGACA 60.036 50.000 26.09 0.00 0.00 4.02
2363 3501 0.654683 GAATGCGCATGAGTGAGGAC 59.345 55.000 26.09 3.65 0.00 3.85
2364 3502 0.249955 TGAATGCGCATGAGTGAGGA 59.750 50.000 26.09 0.00 0.00 3.71
2365 3503 0.656259 CTGAATGCGCATGAGTGAGG 59.344 55.000 26.09 6.51 0.00 3.86
2366 3504 0.656259 CCTGAATGCGCATGAGTGAG 59.344 55.000 26.09 11.94 0.00 3.51
2367 3505 0.249955 TCCTGAATGCGCATGAGTGA 59.750 50.000 26.09 15.58 0.00 3.41
2368 3506 0.376152 GTCCTGAATGCGCATGAGTG 59.624 55.000 26.09 13.42 0.00 3.51
2369 3507 1.086067 CGTCCTGAATGCGCATGAGT 61.086 55.000 26.09 8.51 0.00 3.41
2370 3508 0.807275 TCGTCCTGAATGCGCATGAG 60.807 55.000 26.09 21.52 0.00 2.90
2371 3509 0.390998 TTCGTCCTGAATGCGCATGA 60.391 50.000 26.09 14.12 0.00 3.07
2372 3510 0.247814 GTTCGTCCTGAATGCGCATG 60.248 55.000 26.09 11.67 39.21 4.06
2373 3511 0.391661 AGTTCGTCCTGAATGCGCAT 60.392 50.000 19.28 19.28 39.21 4.73
2374 3512 0.602638 AAGTTCGTCCTGAATGCGCA 60.603 50.000 14.96 14.96 39.21 6.09
2375 3513 0.095417 GAAGTTCGTCCTGAATGCGC 59.905 55.000 0.00 0.00 39.21 6.09
2376 3514 0.721718 GGAAGTTCGTCCTGAATGCG 59.278 55.000 0.00 0.00 39.21 4.73
2377 3515 2.100605 AGGAAGTTCGTCCTGAATGC 57.899 50.000 6.51 0.00 46.75 3.56
2384 3522 0.531200 ACCGATCAGGAAGTTCGTCC 59.469 55.000 10.05 0.00 45.00 4.79
2385 3523 1.201647 TGACCGATCAGGAAGTTCGTC 59.798 52.381 10.05 0.00 45.00 4.20
2386 3524 1.067776 GTGACCGATCAGGAAGTTCGT 60.068 52.381 10.05 0.00 45.00 3.85
2387 3525 1.202582 AGTGACCGATCAGGAAGTTCG 59.797 52.381 10.05 0.00 45.00 3.95
2388 3526 2.231478 TGAGTGACCGATCAGGAAGTTC 59.769 50.000 10.05 0.00 45.00 3.01
2389 3527 2.248248 TGAGTGACCGATCAGGAAGTT 58.752 47.619 10.05 0.00 45.00 2.66
2390 3528 1.924731 TGAGTGACCGATCAGGAAGT 58.075 50.000 10.05 2.17 45.00 3.01
2391 3529 2.223923 GGATGAGTGACCGATCAGGAAG 60.224 54.545 10.05 0.00 45.00 3.46
2392 3530 1.757118 GGATGAGTGACCGATCAGGAA 59.243 52.381 10.05 0.00 45.00 3.36
2393 3531 1.063642 AGGATGAGTGACCGATCAGGA 60.064 52.381 10.05 0.00 45.00 3.86
2395 3533 3.481453 TCTAGGATGAGTGACCGATCAG 58.519 50.000 0.00 0.00 34.75 2.90
2396 3534 3.577805 TCTAGGATGAGTGACCGATCA 57.422 47.619 0.00 0.00 0.00 2.92
2397 3535 5.461032 AATTCTAGGATGAGTGACCGATC 57.539 43.478 0.00 0.00 0.00 3.69
2398 3536 5.244178 GGTAATTCTAGGATGAGTGACCGAT 59.756 44.000 0.00 0.00 0.00 4.18
2399 3537 4.583489 GGTAATTCTAGGATGAGTGACCGA 59.417 45.833 0.00 0.00 0.00 4.69
2400 3538 4.262079 GGGTAATTCTAGGATGAGTGACCG 60.262 50.000 0.00 0.00 0.00 4.79
2401 3539 4.040584 GGGGTAATTCTAGGATGAGTGACC 59.959 50.000 0.00 0.00 0.00 4.02
2402 3540 4.654262 TGGGGTAATTCTAGGATGAGTGAC 59.346 45.833 0.00 0.00 0.00 3.67
2403 3541 4.890988 TGGGGTAATTCTAGGATGAGTGA 58.109 43.478 0.00 0.00 0.00 3.41
2404 3542 5.131142 ACTTGGGGTAATTCTAGGATGAGTG 59.869 44.000 0.00 0.00 0.00 3.51
2405 3543 5.289510 ACTTGGGGTAATTCTAGGATGAGT 58.710 41.667 0.00 0.00 0.00 3.41
2406 3544 5.366768 TGACTTGGGGTAATTCTAGGATGAG 59.633 44.000 0.00 0.00 0.00 2.90
2407 3545 5.285401 TGACTTGGGGTAATTCTAGGATGA 58.715 41.667 0.00 0.00 0.00 2.92
2408 3546 5.630415 TGACTTGGGGTAATTCTAGGATG 57.370 43.478 0.00 0.00 0.00 3.51
2409 3547 6.652205 TTTGACTTGGGGTAATTCTAGGAT 57.348 37.500 0.00 0.00 0.00 3.24
2410 3548 6.652205 ATTTGACTTGGGGTAATTCTAGGA 57.348 37.500 0.00 0.00 0.00 2.94
2411 3549 7.282450 GTGTATTTGACTTGGGGTAATTCTAGG 59.718 40.741 0.00 0.00 0.00 3.02
2412 3550 8.047310 AGTGTATTTGACTTGGGGTAATTCTAG 58.953 37.037 0.00 0.00 0.00 2.43
2413 3551 7.924541 AGTGTATTTGACTTGGGGTAATTCTA 58.075 34.615 0.00 0.00 0.00 2.10
2414 3552 6.790319 AGTGTATTTGACTTGGGGTAATTCT 58.210 36.000 0.00 0.00 0.00 2.40
2415 3553 7.462571 AAGTGTATTTGACTTGGGGTAATTC 57.537 36.000 0.00 0.00 32.30 2.17
2416 3554 8.799367 GTTAAGTGTATTTGACTTGGGGTAATT 58.201 33.333 0.00 0.00 35.30 1.40
2417 3555 8.168058 AGTTAAGTGTATTTGACTTGGGGTAAT 58.832 33.333 0.00 0.00 35.30 1.89
2418 3556 7.519927 AGTTAAGTGTATTTGACTTGGGGTAA 58.480 34.615 0.00 0.00 35.30 2.85
2419 3557 7.081857 AGTTAAGTGTATTTGACTTGGGGTA 57.918 36.000 0.00 0.00 35.30 3.69
2420 3558 5.948842 AGTTAAGTGTATTTGACTTGGGGT 58.051 37.500 0.00 0.00 35.30 4.95
2421 3559 6.894339 AAGTTAAGTGTATTTGACTTGGGG 57.106 37.500 0.00 0.00 36.08 4.96
2422 3560 7.013846 TCCAAAGTTAAGTGTATTTGACTTGGG 59.986 37.037 10.24 10.24 43.79 4.12
2423 3561 7.936584 TCCAAAGTTAAGTGTATTTGACTTGG 58.063 34.615 0.00 0.00 37.09 3.61
2424 3562 8.621286 ACTCCAAAGTTAAGTGTATTTGACTTG 58.379 33.333 0.00 0.00 37.09 3.16
2425 3563 8.747538 ACTCCAAAGTTAAGTGTATTTGACTT 57.252 30.769 0.00 0.00 38.18 3.01
2426 3564 8.747538 AACTCCAAAGTTAAGTGTATTTGACT 57.252 30.769 0.00 0.00 43.98 3.41
2427 3565 9.797556 AAAACTCCAAAGTTAAGTGTATTTGAC 57.202 29.630 0.00 0.00 45.07 3.18
2453 3591 7.499321 TCTTTTACGGTAGCTCATTCAAAAA 57.501 32.000 0.00 0.00 0.00 1.94
2454 3592 7.442969 TCTTCTTTTACGGTAGCTCATTCAAAA 59.557 33.333 0.00 0.00 0.00 2.44
2455 3593 6.932400 TCTTCTTTTACGGTAGCTCATTCAAA 59.068 34.615 0.00 0.00 0.00 2.69
2456 3594 6.460781 TCTTCTTTTACGGTAGCTCATTCAA 58.539 36.000 0.00 0.00 0.00 2.69
2457 3595 6.032956 TCTTCTTTTACGGTAGCTCATTCA 57.967 37.500 0.00 0.00 0.00 2.57
2458 3596 6.963049 TTCTTCTTTTACGGTAGCTCATTC 57.037 37.500 0.00 0.00 0.00 2.67
2459 3597 7.923414 ATTTCTTCTTTTACGGTAGCTCATT 57.077 32.000 0.00 0.00 0.00 2.57
2460 3598 7.065923 GGAATTTCTTCTTTTACGGTAGCTCAT 59.934 37.037 0.00 0.00 0.00 2.90
2461 3599 6.370718 GGAATTTCTTCTTTTACGGTAGCTCA 59.629 38.462 0.00 0.00 0.00 4.26
2462 3600 6.594547 AGGAATTTCTTCTTTTACGGTAGCTC 59.405 38.462 0.00 0.00 0.00 4.09
2463 3601 6.473758 AGGAATTTCTTCTTTTACGGTAGCT 58.526 36.000 0.00 0.00 0.00 3.32
2464 3602 6.738832 AGGAATTTCTTCTTTTACGGTAGC 57.261 37.500 0.00 0.00 0.00 3.58
2467 3605 9.292195 TCAATAAGGAATTTCTTCTTTTACGGT 57.708 29.630 1.07 0.00 33.27 4.83
2520 3658 9.477484 CGTACATTTTGTATAAGAGCCTAGATT 57.523 33.333 0.00 0.00 35.05 2.40
2521 3659 8.639761 ACGTACATTTTGTATAAGAGCCTAGAT 58.360 33.333 0.00 0.00 35.05 1.98
2522 3660 8.004087 ACGTACATTTTGTATAAGAGCCTAGA 57.996 34.615 0.00 0.00 35.05 2.43
2523 3661 8.540492 CAACGTACATTTTGTATAAGAGCCTAG 58.460 37.037 0.00 0.00 35.05 3.02
2524 3662 7.493320 CCAACGTACATTTTGTATAAGAGCCTA 59.507 37.037 0.00 0.00 35.05 3.93
2525 3663 6.315393 CCAACGTACATTTTGTATAAGAGCCT 59.685 38.462 0.00 0.00 35.05 4.58
2526 3664 6.483687 CCAACGTACATTTTGTATAAGAGCC 58.516 40.000 0.00 0.00 35.05 4.70
2527 3665 5.963586 GCCAACGTACATTTTGTATAAGAGC 59.036 40.000 0.00 0.00 35.05 4.09
2528 3666 6.092944 TGGCCAACGTACATTTTGTATAAGAG 59.907 38.462 0.61 0.00 35.05 2.85
2529 3667 5.938710 TGGCCAACGTACATTTTGTATAAGA 59.061 36.000 0.61 0.00 35.05 2.10
2530 3668 6.184580 TGGCCAACGTACATTTTGTATAAG 57.815 37.500 0.61 0.00 35.05 1.73
2531 3669 6.761099 ATGGCCAACGTACATTTTGTATAA 57.239 33.333 10.96 0.00 35.05 0.98
2532 3670 7.860918 TTATGGCCAACGTACATTTTGTATA 57.139 32.000 10.96 0.00 35.05 1.47
2533 3671 6.761099 TTATGGCCAACGTACATTTTGTAT 57.239 33.333 10.96 0.00 35.05 2.29
2534 3672 6.570672 TTTATGGCCAACGTACATTTTGTA 57.429 33.333 10.96 0.00 0.00 2.41
2535 3673 5.455056 TTTATGGCCAACGTACATTTTGT 57.545 34.783 10.96 0.00 0.00 2.83
2536 3674 5.923684 ACTTTTATGGCCAACGTACATTTTG 59.076 36.000 10.96 0.00 0.00 2.44
2537 3675 5.923684 CACTTTTATGGCCAACGTACATTTT 59.076 36.000 10.96 0.00 0.00 1.82
2538 3676 5.010213 ACACTTTTATGGCCAACGTACATTT 59.990 36.000 10.96 0.00 0.00 2.32
2539 3677 4.521256 ACACTTTTATGGCCAACGTACATT 59.479 37.500 10.96 0.00 0.00 2.71
2540 3678 4.076394 ACACTTTTATGGCCAACGTACAT 58.924 39.130 10.96 0.00 0.00 2.29
2541 3679 3.478509 ACACTTTTATGGCCAACGTACA 58.521 40.909 10.96 0.00 0.00 2.90
2542 3680 5.352016 TGATACACTTTTATGGCCAACGTAC 59.648 40.000 10.96 0.62 0.00 3.67
2543 3681 5.489249 TGATACACTTTTATGGCCAACGTA 58.511 37.500 10.96 4.12 0.00 3.57
2643 5077 5.357878 CAGCCACCATAATAGTGAACACAAT 59.642 40.000 7.68 0.00 37.42 2.71
2645 5079 4.019771 TCAGCCACCATAATAGTGAACACA 60.020 41.667 7.68 0.00 37.42 3.72
2770 5212 1.258982 CGATTGTTCTGCGGCATAGAC 59.741 52.381 1.75 3.36 0.00 2.59
2778 5220 2.465109 GCATTTATGCGATTGTTCTGCG 59.535 45.455 0.00 0.00 44.67 5.18
2809 5260 2.372890 CCTCATCTGCCCCTCTGCA 61.373 63.158 0.00 0.00 39.37 4.41
2820 5271 1.141254 CCTCTGCATGCTTCCTCATCT 59.859 52.381 20.33 0.00 0.00 2.90
2822 5273 0.183014 CCCTCTGCATGCTTCCTCAT 59.817 55.000 20.33 0.00 0.00 2.90
3066 5517 1.451387 GCACCGGGTACATTCCAGG 60.451 63.158 6.32 0.72 45.90 4.45
3067 5518 1.024579 GTGCACCGGGTACATTCCAG 61.025 60.000 5.22 0.00 31.67 3.86
3068 5519 1.003112 GTGCACCGGGTACATTCCA 60.003 57.895 5.22 0.00 31.67 3.53
3069 5520 1.747745 GGTGCACCGGGTACATTCC 60.748 63.158 22.49 0.00 33.19 3.01
3070 5521 3.899395 GGTGCACCGGGTACATTC 58.101 61.111 22.49 0.00 33.19 2.67
3084 5535 1.175983 TAACTTTTGGGCAGCCGGTG 61.176 55.000 5.00 0.89 0.00 4.94
3085 5536 1.151908 TAACTTTTGGGCAGCCGGT 59.848 52.632 5.00 0.00 0.00 5.28
3086 5537 1.584495 GTAACTTTTGGGCAGCCGG 59.416 57.895 5.00 0.00 0.00 6.13
3087 5538 1.175983 TGGTAACTTTTGGGCAGCCG 61.176 55.000 5.00 0.00 37.61 5.52
3088 5539 1.266178 ATGGTAACTTTTGGGCAGCC 58.734 50.000 1.26 1.26 37.61 4.85
3089 5540 4.529109 TTTATGGTAACTTTTGGGCAGC 57.471 40.909 0.00 0.00 37.61 5.25
3090 5541 6.934083 ACATTTTTATGGTAACTTTTGGGCAG 59.066 34.615 0.00 0.00 37.61 4.85
3091 5542 6.708054 CACATTTTTATGGTAACTTTTGGGCA 59.292 34.615 0.00 0.00 37.61 5.36
3092 5543 6.148645 CCACATTTTTATGGTAACTTTTGGGC 59.851 38.462 0.00 0.00 37.61 5.36
3093 5544 7.445945 TCCACATTTTTATGGTAACTTTTGGG 58.554 34.615 0.00 0.00 37.27 4.12
3094 5545 8.894768 TTCCACATTTTTATGGTAACTTTTGG 57.105 30.769 0.00 0.00 37.27 3.28
3119 5570 9.320352 GGGACGTGCCAAATTATTTTTATATTT 57.680 29.630 22.60 0.00 38.95 1.40
3120 5571 7.929245 GGGGACGTGCCAAATTATTTTTATATT 59.071 33.333 28.30 0.00 38.95 1.28
3121 5572 7.070074 TGGGGACGTGCCAAATTATTTTTATAT 59.930 33.333 28.30 0.00 38.95 0.86
3122 5573 6.380274 TGGGGACGTGCCAAATTATTTTTATA 59.620 34.615 28.30 0.00 38.95 0.98
3123 5574 5.187967 TGGGGACGTGCCAAATTATTTTTAT 59.812 36.000 28.30 0.00 38.95 1.40
3124 5575 4.527038 TGGGGACGTGCCAAATTATTTTTA 59.473 37.500 28.30 0.00 38.95 1.52
3125 5576 3.325135 TGGGGACGTGCCAAATTATTTTT 59.675 39.130 28.30 0.00 38.95 1.94
3126 5577 2.900546 TGGGGACGTGCCAAATTATTTT 59.099 40.909 28.30 0.00 38.95 1.82
3127 5578 2.530701 TGGGGACGTGCCAAATTATTT 58.469 42.857 28.30 0.00 38.95 1.40
3128 5579 2.223803 TGGGGACGTGCCAAATTATT 57.776 45.000 28.30 0.00 38.95 1.40
3129 5580 2.452600 ATGGGGACGTGCCAAATTAT 57.547 45.000 28.30 10.39 38.95 1.28
3130 5581 3.989782 ATGGGGACGTGCCAAATTA 57.010 47.368 28.30 8.46 38.95 1.40
3131 5582 3.989782 TATGGGGACGTGCCAAATT 57.010 47.368 28.30 11.11 38.95 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.