Multiple sequence alignment - TraesCS7A01G352500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G352500 chr7A 100.000 5004 0 0 1 5004 516109956 516104953 0.000000e+00 9241.0
1 TraesCS7A01G352500 chr7D 88.758 3834 249 91 448 4201 479032550 479036281 0.000000e+00 4525.0
2 TraesCS7A01G352500 chr7B 88.594 3200 224 68 451 3610 504808541 504811639 0.000000e+00 3757.0
3 TraesCS7A01G352500 chr7B 92.718 563 33 6 3645 4201 504811791 504812351 0.000000e+00 806.0
4 TraesCS7A01G352500 chr4B 98.254 802 13 1 4203 5004 593347181 593346381 0.000000e+00 1402.0
5 TraesCS7A01G352500 chr3B 98.113 795 15 0 4210 5004 47021730 47022524 0.000000e+00 1386.0
6 TraesCS7A01G352500 chr3B 87.192 812 82 9 4214 5004 801308447 801307637 0.000000e+00 904.0
7 TraesCS7A01G352500 chr3B 84.459 444 60 9 12 449 309387790 309387350 3.580000e-116 429.0
8 TraesCS7A01G352500 chr3B 87.607 234 15 9 4211 4430 820046431 820046198 4.970000e-65 259.0
9 TraesCS7A01G352500 chr3B 92.308 117 4 1 4216 4332 566277753 566277642 1.440000e-35 161.0
10 TraesCS7A01G352500 chr5A 87.284 810 83 8 4214 5004 540572153 540571345 0.000000e+00 907.0
11 TraesCS7A01G352500 chr5A 94.737 76 3 1 2374 2448 439228481 439228406 3.170000e-22 117.0
12 TraesCS7A01G352500 chr2D 85.811 444 49 10 3 434 577614326 577614767 4.570000e-125 459.0
13 TraesCS7A01G352500 chr2D 85.383 431 49 9 1 427 406142857 406143277 7.690000e-118 435.0
14 TraesCS7A01G352500 chr1B 85.227 440 55 6 3 434 502634933 502634496 1.280000e-120 444.0
15 TraesCS7A01G352500 chr1B 84.842 442 55 10 3 434 159159562 159160001 7.690000e-118 435.0
16 TraesCS7A01G352500 chr1B 100.000 28 0 0 3139 3166 426781056 426781083 9.000000e-03 52.8
17 TraesCS7A01G352500 chr6B 84.257 451 58 8 3 452 382062466 382062028 1.290000e-115 427.0
18 TraesCS7A01G352500 chr6B 82.895 456 64 7 3 448 120807717 120807266 1.010000e-106 398.0
19 TraesCS7A01G352500 chr6B 94.737 76 3 1 2374 2448 395630503 395630428 3.170000e-22 117.0
20 TraesCS7A01G352500 chr6B 100.000 28 0 0 3139 3166 345237845 345237872 9.000000e-03 52.8
21 TraesCS7A01G352500 chr5B 83.624 458 61 7 3 448 640310097 640309642 7.750000e-113 418.0
22 TraesCS7A01G352500 chr5B 93.421 76 4 1 2374 2448 174982534 174982459 1.470000e-20 111.0
23 TraesCS7A01G352500 chr2B 83.736 455 59 10 3 446 61098471 61098021 2.790000e-112 416.0
24 TraesCS7A01G352500 chr3A 85.484 124 18 0 4210 4333 82438565 82438688 4.070000e-26 130.0
25 TraesCS7A01G352500 chr6A 94.737 76 3 1 2374 2448 462434575 462434650 3.170000e-22 117.0
26 TraesCS7A01G352500 chr4A 93.421 76 4 1 2374 2448 276756777 276756702 1.470000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G352500 chr7A 516104953 516109956 5003 True 9241.0 9241 100.000 1 5004 1 chr7A.!!$R1 5003
1 TraesCS7A01G352500 chr7D 479032550 479036281 3731 False 4525.0 4525 88.758 448 4201 1 chr7D.!!$F1 3753
2 TraesCS7A01G352500 chr7B 504808541 504812351 3810 False 2281.5 3757 90.656 451 4201 2 chr7B.!!$F1 3750
3 TraesCS7A01G352500 chr4B 593346381 593347181 800 True 1402.0 1402 98.254 4203 5004 1 chr4B.!!$R1 801
4 TraesCS7A01G352500 chr3B 47021730 47022524 794 False 1386.0 1386 98.113 4210 5004 1 chr3B.!!$F1 794
5 TraesCS7A01G352500 chr3B 801307637 801308447 810 True 904.0 904 87.192 4214 5004 1 chr3B.!!$R3 790
6 TraesCS7A01G352500 chr5A 540571345 540572153 808 True 907.0 907 87.284 4214 5004 1 chr5A.!!$R2 790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
347 348 0.030638 GTGTGGTGTCAAGCGCAAAT 59.969 50.0 11.47 0.00 45.22 2.32 F
711 719 0.171903 CACGTTACGTCGATCCCCTT 59.828 55.0 7.67 0.00 38.32 3.95 F
1588 1633 0.100682 GCGCCTGTTCTCTCGTGATA 59.899 55.0 0.00 0.00 0.00 2.15 F
2660 2718 0.325933 CATCAGAACTGCACTCCCCA 59.674 55.0 0.00 0.00 0.00 4.96 F
3650 3891 0.166379 GACCGACGAGTCTGACTGAC 59.834 60.0 16.28 4.39 45.67 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1569 1614 0.100682 TATCACGAGAGAACAGGCGC 59.899 55.000 0.00 0.00 0.00 6.53 R
2164 2215 0.397941 TTGCACACCTGGAGGAAGAG 59.602 55.000 0.00 0.00 38.94 2.85 R
2865 2927 1.081094 GCAAAGCCATGCAAACATCC 58.919 50.000 6.46 0.00 45.70 3.51 R
3884 4125 0.036765 TTGTACTCGTCCACCATGGC 60.037 55.000 13.04 0.00 37.47 4.40 R
4961 5255 3.194861 TCGCCAGATCGATCGAAATTTT 58.805 40.909 23.50 4.62 33.02 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.760192 GTAGGTAGTTGAGGAGCGGA 58.240 55.000 0.00 0.00 0.00 5.54
20 21 2.308690 GTAGGTAGTTGAGGAGCGGAT 58.691 52.381 0.00 0.00 0.00 4.18
21 22 1.115467 AGGTAGTTGAGGAGCGGATG 58.885 55.000 0.00 0.00 0.00 3.51
22 23 0.530870 GGTAGTTGAGGAGCGGATGC 60.531 60.000 0.00 0.00 43.24 3.91
23 24 0.175760 GTAGTTGAGGAGCGGATGCA 59.824 55.000 0.00 0.00 46.23 3.96
24 25 0.461548 TAGTTGAGGAGCGGATGCAG 59.538 55.000 0.00 0.00 46.23 4.41
25 26 1.219124 GTTGAGGAGCGGATGCAGA 59.781 57.895 0.00 0.00 46.23 4.26
26 27 1.086634 GTTGAGGAGCGGATGCAGAC 61.087 60.000 0.00 0.00 46.23 3.51
27 28 1.260538 TTGAGGAGCGGATGCAGACT 61.261 55.000 0.00 0.00 46.23 3.24
28 29 1.227205 GAGGAGCGGATGCAGACTG 60.227 63.158 0.00 0.00 46.23 3.51
29 30 1.954362 GAGGAGCGGATGCAGACTGT 61.954 60.000 3.99 0.00 46.23 3.55
30 31 1.812922 GGAGCGGATGCAGACTGTG 60.813 63.158 3.99 0.00 46.23 3.66
31 32 1.812922 GAGCGGATGCAGACTGTGG 60.813 63.158 3.99 0.00 46.23 4.17
32 33 2.046892 GCGGATGCAGACTGTGGT 60.047 61.111 3.99 0.00 42.15 4.16
33 34 2.103042 GCGGATGCAGACTGTGGTC 61.103 63.158 3.99 0.28 42.15 4.02
42 43 2.449548 GACTGTGGTCTGCATCACG 58.550 57.895 9.41 7.44 39.24 4.35
43 44 0.038251 GACTGTGGTCTGCATCACGA 60.038 55.000 9.41 0.00 39.24 4.35
44 45 0.319900 ACTGTGGTCTGCATCACGAC 60.320 55.000 9.41 7.14 36.74 4.34
45 46 0.319813 CTGTGGTCTGCATCACGACA 60.320 55.000 11.63 11.63 36.74 4.35
46 47 0.321346 TGTGGTCTGCATCACGACAT 59.679 50.000 9.01 0.00 36.74 3.06
47 48 1.002366 GTGGTCTGCATCACGACATC 58.998 55.000 6.21 0.00 31.88 3.06
48 49 0.897621 TGGTCTGCATCACGACATCT 59.102 50.000 6.21 0.00 31.88 2.90
49 50 1.284657 GGTCTGCATCACGACATCTG 58.715 55.000 6.21 0.00 31.88 2.90
50 51 1.284657 GTCTGCATCACGACATCTGG 58.715 55.000 0.00 0.00 0.00 3.86
51 52 1.134995 GTCTGCATCACGACATCTGGA 60.135 52.381 0.00 0.00 0.00 3.86
52 53 1.550072 TCTGCATCACGACATCTGGAA 59.450 47.619 0.00 0.00 0.00 3.53
53 54 1.931841 CTGCATCACGACATCTGGAAG 59.068 52.381 0.00 0.00 0.00 3.46
65 66 1.581934 TCTGGAAGACAAAGCGTGTG 58.418 50.000 0.39 0.00 41.96 3.82
66 67 0.040958 CTGGAAGACAAAGCGTGTGC 60.041 55.000 0.39 0.00 41.96 4.57
68 69 4.498537 CTGGAAGACAAAGCGTGTGCTG 62.499 54.545 0.39 0.00 45.77 4.41
78 79 4.626081 GTGTGCTGGGCTCGTGGT 62.626 66.667 0.00 0.00 0.00 4.16
79 80 3.872603 TGTGCTGGGCTCGTGGTT 61.873 61.111 0.00 0.00 0.00 3.67
80 81 3.050275 GTGCTGGGCTCGTGGTTC 61.050 66.667 0.00 0.00 0.00 3.62
81 82 4.680237 TGCTGGGCTCGTGGTTCG 62.680 66.667 0.00 0.00 41.41 3.95
82 83 4.681978 GCTGGGCTCGTGGTTCGT 62.682 66.667 0.00 0.00 40.80 3.85
83 84 2.738521 CTGGGCTCGTGGTTCGTG 60.739 66.667 0.00 0.00 40.80 4.35
84 85 4.308458 TGGGCTCGTGGTTCGTGG 62.308 66.667 0.00 0.00 40.80 4.94
85 86 3.998672 GGGCTCGTGGTTCGTGGA 61.999 66.667 0.00 0.00 40.80 4.02
86 87 2.264794 GGCTCGTGGTTCGTGGAT 59.735 61.111 0.00 0.00 40.80 3.41
87 88 2.100631 GGCTCGTGGTTCGTGGATG 61.101 63.158 0.00 0.00 40.80 3.51
88 89 2.100631 GCTCGTGGTTCGTGGATGG 61.101 63.158 0.00 0.00 40.80 3.51
89 90 2.047655 TCGTGGTTCGTGGATGGC 60.048 61.111 0.00 0.00 40.80 4.40
90 91 2.358125 CGTGGTTCGTGGATGGCA 60.358 61.111 0.00 0.00 34.52 4.92
91 92 1.963855 CGTGGTTCGTGGATGGCAA 60.964 57.895 0.00 0.00 34.52 4.52
92 93 1.875963 GTGGTTCGTGGATGGCAAG 59.124 57.895 0.00 0.00 0.00 4.01
93 94 0.889186 GTGGTTCGTGGATGGCAAGT 60.889 55.000 0.00 0.00 0.00 3.16
94 95 0.179004 TGGTTCGTGGATGGCAAGTT 60.179 50.000 0.00 0.00 0.00 2.66
95 96 0.958822 GGTTCGTGGATGGCAAGTTT 59.041 50.000 0.00 0.00 0.00 2.66
96 97 1.339929 GGTTCGTGGATGGCAAGTTTT 59.660 47.619 0.00 0.00 0.00 2.43
97 98 2.393764 GTTCGTGGATGGCAAGTTTTG 58.606 47.619 0.00 0.00 0.00 2.44
98 99 1.686355 TCGTGGATGGCAAGTTTTGT 58.314 45.000 0.00 0.00 0.00 2.83
99 100 2.028130 TCGTGGATGGCAAGTTTTGTT 58.972 42.857 0.00 0.00 0.00 2.83
100 101 2.428890 TCGTGGATGGCAAGTTTTGTTT 59.571 40.909 0.00 0.00 0.00 2.83
101 102 3.118956 TCGTGGATGGCAAGTTTTGTTTT 60.119 39.130 0.00 0.00 0.00 2.43
102 103 3.245048 CGTGGATGGCAAGTTTTGTTTTC 59.755 43.478 0.00 0.00 0.00 2.29
103 104 4.441792 GTGGATGGCAAGTTTTGTTTTCT 58.558 39.130 0.00 0.00 0.00 2.52
104 105 4.507756 GTGGATGGCAAGTTTTGTTTTCTC 59.492 41.667 0.00 0.00 0.00 2.87
105 106 4.058124 GGATGGCAAGTTTTGTTTTCTCC 58.942 43.478 0.00 0.00 0.00 3.71
106 107 4.202253 GGATGGCAAGTTTTGTTTTCTCCT 60.202 41.667 0.00 0.00 0.00 3.69
107 108 4.385358 TGGCAAGTTTTGTTTTCTCCTC 57.615 40.909 0.00 0.00 0.00 3.71
108 109 3.132111 TGGCAAGTTTTGTTTTCTCCTCC 59.868 43.478 0.00 0.00 0.00 4.30
109 110 3.372060 GCAAGTTTTGTTTTCTCCTCCG 58.628 45.455 0.00 0.00 0.00 4.63
110 111 3.066203 GCAAGTTTTGTTTTCTCCTCCGA 59.934 43.478 0.00 0.00 0.00 4.55
111 112 4.598062 CAAGTTTTGTTTTCTCCTCCGAC 58.402 43.478 0.00 0.00 0.00 4.79
112 113 2.870411 AGTTTTGTTTTCTCCTCCGACG 59.130 45.455 0.00 0.00 0.00 5.12
113 114 2.607631 TTTGTTTTCTCCTCCGACGT 57.392 45.000 0.00 0.00 0.00 4.34
114 115 2.144482 TTGTTTTCTCCTCCGACGTC 57.856 50.000 5.18 5.18 0.00 4.34
115 116 1.325355 TGTTTTCTCCTCCGACGTCT 58.675 50.000 14.70 0.00 0.00 4.18
116 117 1.684983 TGTTTTCTCCTCCGACGTCTT 59.315 47.619 14.70 0.00 0.00 3.01
117 118 2.886523 TGTTTTCTCCTCCGACGTCTTA 59.113 45.455 14.70 0.00 0.00 2.10
118 119 3.057736 TGTTTTCTCCTCCGACGTCTTAG 60.058 47.826 14.70 10.27 0.00 2.18
119 120 2.486472 TTCTCCTCCGACGTCTTAGT 57.514 50.000 14.70 0.00 0.00 2.24
120 121 2.021355 TCTCCTCCGACGTCTTAGTC 57.979 55.000 14.70 0.00 37.76 2.59
121 122 1.277273 TCTCCTCCGACGTCTTAGTCA 59.723 52.381 14.70 0.00 40.98 3.41
122 123 2.093075 TCTCCTCCGACGTCTTAGTCAT 60.093 50.000 14.70 0.00 40.98 3.06
123 124 2.014857 TCCTCCGACGTCTTAGTCATG 58.985 52.381 14.70 0.00 40.98 3.07
124 125 1.743958 CCTCCGACGTCTTAGTCATGT 59.256 52.381 14.70 0.00 40.98 3.21
125 126 2.478031 CCTCCGACGTCTTAGTCATGTG 60.478 54.545 14.70 0.00 40.98 3.21
126 127 2.418976 CTCCGACGTCTTAGTCATGTGA 59.581 50.000 14.70 0.00 40.98 3.58
127 128 2.418976 TCCGACGTCTTAGTCATGTGAG 59.581 50.000 14.70 0.00 40.98 3.51
128 129 2.478031 CCGACGTCTTAGTCATGTGAGG 60.478 54.545 14.70 0.00 40.98 3.86
129 130 2.478031 CGACGTCTTAGTCATGTGAGGG 60.478 54.545 14.70 0.00 40.98 4.30
130 131 2.492484 GACGTCTTAGTCATGTGAGGGT 59.508 50.000 8.70 0.00 40.65 4.34
131 132 2.231478 ACGTCTTAGTCATGTGAGGGTG 59.769 50.000 0.00 0.00 0.00 4.61
132 133 2.622436 GTCTTAGTCATGTGAGGGTGC 58.378 52.381 0.00 0.00 0.00 5.01
133 134 2.234908 GTCTTAGTCATGTGAGGGTGCT 59.765 50.000 0.00 0.00 0.00 4.40
134 135 3.447586 GTCTTAGTCATGTGAGGGTGCTA 59.552 47.826 0.00 0.00 0.00 3.49
135 136 3.701542 TCTTAGTCATGTGAGGGTGCTAG 59.298 47.826 0.00 0.00 0.00 3.42
136 137 2.238084 AGTCATGTGAGGGTGCTAGA 57.762 50.000 0.00 0.00 0.00 2.43
137 138 2.756907 AGTCATGTGAGGGTGCTAGAT 58.243 47.619 0.00 0.00 0.00 1.98
138 139 2.697751 AGTCATGTGAGGGTGCTAGATC 59.302 50.000 0.00 0.00 0.00 2.75
139 140 2.697751 GTCATGTGAGGGTGCTAGATCT 59.302 50.000 0.00 0.00 0.00 2.75
140 141 2.697229 TCATGTGAGGGTGCTAGATCTG 59.303 50.000 5.18 0.00 0.00 2.90
141 142 2.532250 TGTGAGGGTGCTAGATCTGA 57.468 50.000 5.18 0.00 0.00 3.27
142 143 2.820178 TGTGAGGGTGCTAGATCTGAA 58.180 47.619 5.18 0.00 0.00 3.02
143 144 2.762887 TGTGAGGGTGCTAGATCTGAAG 59.237 50.000 5.18 0.00 0.00 3.02
144 145 2.763448 GTGAGGGTGCTAGATCTGAAGT 59.237 50.000 5.18 0.00 0.00 3.01
145 146 3.196685 GTGAGGGTGCTAGATCTGAAGTT 59.803 47.826 5.18 0.00 0.00 2.66
146 147 3.840666 TGAGGGTGCTAGATCTGAAGTTT 59.159 43.478 5.18 0.00 0.00 2.66
147 148 4.187694 GAGGGTGCTAGATCTGAAGTTTG 58.812 47.826 5.18 0.00 0.00 2.93
148 149 3.840666 AGGGTGCTAGATCTGAAGTTTGA 59.159 43.478 5.18 0.00 0.00 2.69
149 150 4.472833 AGGGTGCTAGATCTGAAGTTTGAT 59.527 41.667 5.18 0.00 0.00 2.57
150 151 4.574013 GGGTGCTAGATCTGAAGTTTGATG 59.426 45.833 5.18 0.00 0.00 3.07
151 152 4.574013 GGTGCTAGATCTGAAGTTTGATGG 59.426 45.833 5.18 0.00 0.00 3.51
152 153 4.034975 GTGCTAGATCTGAAGTTTGATGGC 59.965 45.833 5.18 0.00 0.00 4.40
153 154 3.247173 GCTAGATCTGAAGTTTGATGGCG 59.753 47.826 5.18 0.00 0.00 5.69
154 155 3.340814 AGATCTGAAGTTTGATGGCGT 57.659 42.857 0.00 0.00 0.00 5.68
155 156 3.005554 AGATCTGAAGTTTGATGGCGTG 58.994 45.455 0.00 0.00 0.00 5.34
156 157 2.254546 TCTGAAGTTTGATGGCGTGT 57.745 45.000 0.00 0.00 0.00 4.49
157 158 2.143122 TCTGAAGTTTGATGGCGTGTC 58.857 47.619 0.00 0.00 0.00 3.67
158 159 1.197721 CTGAAGTTTGATGGCGTGTCC 59.802 52.381 0.00 0.00 0.00 4.02
159 160 0.165944 GAAGTTTGATGGCGTGTCCG 59.834 55.000 0.00 0.00 37.80 4.79
160 161 1.234615 AAGTTTGATGGCGTGTCCGG 61.235 55.000 0.00 0.00 37.80 5.14
161 162 2.359354 TTTGATGGCGTGTCCGGG 60.359 61.111 0.00 0.00 37.80 5.73
162 163 3.910914 TTTGATGGCGTGTCCGGGG 62.911 63.158 0.00 0.00 37.80 5.73
178 179 3.948719 GGTGTTGCCCCGGTCTGA 61.949 66.667 0.00 0.00 0.00 3.27
179 180 2.351276 GTGTTGCCCCGGTCTGAT 59.649 61.111 0.00 0.00 0.00 2.90
180 181 1.303317 GTGTTGCCCCGGTCTGATT 60.303 57.895 0.00 0.00 0.00 2.57
181 182 0.893727 GTGTTGCCCCGGTCTGATTT 60.894 55.000 0.00 0.00 0.00 2.17
182 183 0.893270 TGTTGCCCCGGTCTGATTTG 60.893 55.000 0.00 0.00 0.00 2.32
183 184 0.893727 GTTGCCCCGGTCTGATTTGT 60.894 55.000 0.00 0.00 0.00 2.83
184 185 0.178975 TTGCCCCGGTCTGATTTGTT 60.179 50.000 0.00 0.00 0.00 2.83
185 186 0.608035 TGCCCCGGTCTGATTTGTTC 60.608 55.000 0.00 0.00 0.00 3.18
186 187 0.608035 GCCCCGGTCTGATTTGTTCA 60.608 55.000 0.00 0.00 0.00 3.18
187 188 1.904287 CCCCGGTCTGATTTGTTCAA 58.096 50.000 0.00 0.00 32.78 2.69
188 189 1.539827 CCCCGGTCTGATTTGTTCAAC 59.460 52.381 0.00 0.00 32.78 3.18
189 190 1.196808 CCCGGTCTGATTTGTTCAACG 59.803 52.381 0.00 0.00 32.78 4.10
190 191 1.196808 CCGGTCTGATTTGTTCAACGG 59.803 52.381 0.00 0.00 38.78 4.44
191 192 1.871039 CGGTCTGATTTGTTCAACGGT 59.129 47.619 0.00 0.00 32.78 4.83
192 193 3.061322 CGGTCTGATTTGTTCAACGGTA 58.939 45.455 0.00 0.00 32.78 4.02
193 194 3.495377 CGGTCTGATTTGTTCAACGGTAA 59.505 43.478 0.00 0.00 32.78 2.85
194 195 4.153475 CGGTCTGATTTGTTCAACGGTAAT 59.847 41.667 0.00 0.00 32.78 1.89
195 196 5.390613 GGTCTGATTTGTTCAACGGTAATG 58.609 41.667 0.00 0.00 32.78 1.90
196 197 5.390613 GTCTGATTTGTTCAACGGTAATGG 58.609 41.667 0.00 0.00 32.78 3.16
197 198 5.048991 GTCTGATTTGTTCAACGGTAATGGT 60.049 40.000 0.00 0.00 32.78 3.55
198 199 5.533154 TCTGATTTGTTCAACGGTAATGGTT 59.467 36.000 0.00 0.00 32.78 3.67
199 200 6.039941 TCTGATTTGTTCAACGGTAATGGTTT 59.960 34.615 0.00 0.00 32.78 3.27
200 201 6.210078 TGATTTGTTCAACGGTAATGGTTTC 58.790 36.000 0.00 0.00 0.00 2.78
201 202 3.881780 TGTTCAACGGTAATGGTTTCG 57.118 42.857 0.00 0.00 0.00 3.46
202 203 3.204526 TGTTCAACGGTAATGGTTTCGT 58.795 40.909 0.00 0.00 37.45 3.85
203 204 3.626670 TGTTCAACGGTAATGGTTTCGTT 59.373 39.130 0.00 0.00 45.02 3.85
204 205 4.096081 TGTTCAACGGTAATGGTTTCGTTT 59.904 37.500 0.00 0.00 42.77 3.60
205 206 4.897025 TCAACGGTAATGGTTTCGTTTT 57.103 36.364 0.00 0.00 42.77 2.43
206 207 5.246145 TCAACGGTAATGGTTTCGTTTTT 57.754 34.783 0.00 0.00 42.77 1.94
207 208 6.369059 TCAACGGTAATGGTTTCGTTTTTA 57.631 33.333 0.00 0.00 42.77 1.52
208 209 6.428799 TCAACGGTAATGGTTTCGTTTTTAG 58.571 36.000 0.00 0.00 42.77 1.85
209 210 4.786507 ACGGTAATGGTTTCGTTTTTAGC 58.213 39.130 0.00 0.00 31.38 3.09
210 211 4.275443 ACGGTAATGGTTTCGTTTTTAGCA 59.725 37.500 0.00 0.00 31.38 3.49
211 212 5.213675 CGGTAATGGTTTCGTTTTTAGCAA 58.786 37.500 0.00 0.00 0.00 3.91
212 213 5.341196 CGGTAATGGTTTCGTTTTTAGCAAG 59.659 40.000 0.00 0.00 0.00 4.01
213 214 5.118050 GGTAATGGTTTCGTTTTTAGCAAGC 59.882 40.000 0.00 0.00 0.00 4.01
214 215 3.086818 TGGTTTCGTTTTTAGCAAGCC 57.913 42.857 0.00 0.00 0.00 4.35
215 216 2.427453 TGGTTTCGTTTTTAGCAAGCCA 59.573 40.909 0.00 0.00 0.00 4.75
216 217 2.792674 GGTTTCGTTTTTAGCAAGCCAC 59.207 45.455 0.00 0.00 0.00 5.01
217 218 2.785713 TTCGTTTTTAGCAAGCCACC 57.214 45.000 0.00 0.00 0.00 4.61
218 219 1.975660 TCGTTTTTAGCAAGCCACCT 58.024 45.000 0.00 0.00 0.00 4.00
219 220 1.606668 TCGTTTTTAGCAAGCCACCTG 59.393 47.619 0.00 0.00 0.00 4.00
220 221 1.606668 CGTTTTTAGCAAGCCACCTGA 59.393 47.619 0.00 0.00 0.00 3.86
221 222 2.350772 CGTTTTTAGCAAGCCACCTGAG 60.351 50.000 0.00 0.00 0.00 3.35
222 223 2.884639 GTTTTTAGCAAGCCACCTGAGA 59.115 45.455 0.00 0.00 0.00 3.27
223 224 2.479566 TTTAGCAAGCCACCTGAGAG 57.520 50.000 0.00 0.00 0.00 3.20
224 225 0.615331 TTAGCAAGCCACCTGAGAGG 59.385 55.000 0.00 0.00 42.49 3.69
234 235 3.239861 CCTGAGAGGTCCACAAAGC 57.760 57.895 0.00 0.00 0.00 3.51
235 236 0.689623 CCTGAGAGGTCCACAAAGCT 59.310 55.000 0.00 0.00 0.00 3.74
236 237 1.610102 CCTGAGAGGTCCACAAAGCTG 60.610 57.143 0.00 0.00 0.00 4.24
237 238 0.250467 TGAGAGGTCCACAAAGCTGC 60.250 55.000 0.00 0.00 0.00 5.25
238 239 0.250467 GAGAGGTCCACAAAGCTGCA 60.250 55.000 1.02 0.00 0.00 4.41
239 240 0.403271 AGAGGTCCACAAAGCTGCAT 59.597 50.000 1.02 0.00 0.00 3.96
240 241 1.630369 AGAGGTCCACAAAGCTGCATA 59.370 47.619 1.02 0.00 0.00 3.14
241 242 2.240667 AGAGGTCCACAAAGCTGCATAT 59.759 45.455 1.02 0.00 0.00 1.78
242 243 2.615912 GAGGTCCACAAAGCTGCATATC 59.384 50.000 1.02 0.00 0.00 1.63
243 244 2.025981 AGGTCCACAAAGCTGCATATCA 60.026 45.455 1.02 0.00 0.00 2.15
244 245 2.357009 GGTCCACAAAGCTGCATATCAG 59.643 50.000 1.02 0.00 45.62 2.90
253 254 1.077123 CTGCATATCAGCGATGGAGC 58.923 55.000 0.00 0.53 36.19 4.70
254 255 0.321034 TGCATATCAGCGATGGAGCC 60.321 55.000 0.00 0.00 38.01 4.70
255 256 1.357258 GCATATCAGCGATGGAGCCG 61.357 60.000 0.00 0.00 38.01 5.52
272 273 4.838486 GCGTCGAGCTCGGGTGAG 62.838 72.222 33.98 20.85 45.49 3.51
273 274 3.125573 CGTCGAGCTCGGGTGAGA 61.126 66.667 33.98 12.67 45.57 3.27
274 275 2.687805 CGTCGAGCTCGGGTGAGAA 61.688 63.158 33.98 11.88 45.57 2.87
275 276 1.137825 GTCGAGCTCGGGTGAGAAG 59.862 63.158 33.98 4.66 45.57 2.85
276 277 2.046864 TCGAGCTCGGGTGAGAAGG 61.047 63.158 33.98 3.88 45.57 3.46
277 278 2.344203 CGAGCTCGGGTGAGAAGGT 61.344 63.158 28.40 0.00 45.57 3.50
278 279 1.216710 GAGCTCGGGTGAGAAGGTG 59.783 63.158 0.00 0.00 45.57 4.00
279 280 1.228894 AGCTCGGGTGAGAAGGTGA 60.229 57.895 0.00 0.00 45.57 4.02
280 281 0.616111 AGCTCGGGTGAGAAGGTGAT 60.616 55.000 0.00 0.00 45.57 3.06
281 282 0.179097 GCTCGGGTGAGAAGGTGATC 60.179 60.000 0.00 0.00 45.57 2.92
282 283 0.461961 CTCGGGTGAGAAGGTGATCC 59.538 60.000 0.00 0.00 45.57 3.36
283 284 1.141881 CGGGTGAGAAGGTGATCCG 59.858 63.158 0.00 0.00 39.05 4.18
284 285 1.605058 CGGGTGAGAAGGTGATCCGT 61.605 60.000 0.00 0.00 39.05 4.69
285 286 0.175989 GGGTGAGAAGGTGATCCGTC 59.824 60.000 0.00 0.00 41.41 4.79
286 287 0.895530 GGTGAGAAGGTGATCCGTCA 59.104 55.000 3.45 0.00 43.07 4.35
287 288 1.482593 GGTGAGAAGGTGATCCGTCAT 59.517 52.381 3.45 0.00 43.07 3.06
288 289 2.093447 GGTGAGAAGGTGATCCGTCATT 60.093 50.000 3.45 0.00 43.07 2.57
289 290 3.600388 GTGAGAAGGTGATCCGTCATTT 58.400 45.455 3.45 0.00 43.07 2.32
290 291 4.003648 GTGAGAAGGTGATCCGTCATTTT 58.996 43.478 3.45 0.00 43.07 1.82
291 292 4.455877 GTGAGAAGGTGATCCGTCATTTTT 59.544 41.667 3.45 0.00 43.07 1.94
307 308 3.957383 TTTTTCTTTCGGTGGCTGC 57.043 47.368 0.00 0.00 0.00 5.25
308 309 1.398692 TTTTTCTTTCGGTGGCTGCT 58.601 45.000 0.00 0.00 0.00 4.24
309 310 2.264005 TTTTCTTTCGGTGGCTGCTA 57.736 45.000 0.00 0.00 0.00 3.49
310 311 2.489938 TTTCTTTCGGTGGCTGCTAT 57.510 45.000 0.00 0.00 0.00 2.97
311 312 1.737838 TTCTTTCGGTGGCTGCTATG 58.262 50.000 0.00 0.00 0.00 2.23
312 313 0.901827 TCTTTCGGTGGCTGCTATGA 59.098 50.000 0.00 0.00 0.00 2.15
313 314 1.486310 TCTTTCGGTGGCTGCTATGAT 59.514 47.619 0.00 0.00 0.00 2.45
314 315 1.600957 CTTTCGGTGGCTGCTATGATG 59.399 52.381 0.00 0.00 0.00 3.07
315 316 0.179048 TTCGGTGGCTGCTATGATGG 60.179 55.000 0.00 0.00 0.00 3.51
316 317 1.146930 CGGTGGCTGCTATGATGGT 59.853 57.895 0.00 0.00 0.00 3.55
317 318 0.392706 CGGTGGCTGCTATGATGGTA 59.607 55.000 0.00 0.00 0.00 3.25
318 319 1.873903 CGGTGGCTGCTATGATGGTAC 60.874 57.143 0.00 0.00 0.00 3.34
319 320 1.543429 GGTGGCTGCTATGATGGTACC 60.543 57.143 4.43 4.43 0.00 3.34
320 321 0.392706 TGGCTGCTATGATGGTACCG 59.607 55.000 7.57 0.00 0.00 4.02
321 322 0.320771 GGCTGCTATGATGGTACCGG 60.321 60.000 7.57 0.00 0.00 5.28
322 323 0.320771 GCTGCTATGATGGTACCGGG 60.321 60.000 6.32 0.00 0.00 5.73
323 324 0.321671 CTGCTATGATGGTACCGGGG 59.678 60.000 6.32 0.00 0.00 5.73
324 325 1.125093 TGCTATGATGGTACCGGGGG 61.125 60.000 6.32 0.00 0.00 5.40
325 326 1.677552 CTATGATGGTACCGGGGGC 59.322 63.158 6.32 0.00 0.00 5.80
326 327 1.074395 TATGATGGTACCGGGGGCA 60.074 57.895 6.32 0.97 0.00 5.36
327 328 1.125093 TATGATGGTACCGGGGGCAG 61.125 60.000 6.32 0.00 0.00 4.85
328 329 3.873812 GATGGTACCGGGGGCAGG 61.874 72.222 6.32 0.00 0.00 4.85
329 330 4.752594 ATGGTACCGGGGGCAGGT 62.753 66.667 6.32 4.09 45.28 4.00
332 333 4.404098 GTACCGGGGGCAGGTGTG 62.404 72.222 6.32 0.00 42.83 3.82
337 338 4.660938 GGGGGCAGGTGTGGTGTC 62.661 72.222 0.00 0.00 0.00 3.67
338 339 3.884774 GGGGCAGGTGTGGTGTCA 61.885 66.667 0.00 0.00 0.00 3.58
339 340 2.194597 GGGCAGGTGTGGTGTCAA 59.805 61.111 0.00 0.00 0.00 3.18
340 341 1.898574 GGGCAGGTGTGGTGTCAAG 60.899 63.158 0.00 0.00 0.00 3.02
341 342 2.555547 GGCAGGTGTGGTGTCAAGC 61.556 63.158 0.00 0.00 0.00 4.01
342 343 2.896801 GCAGGTGTGGTGTCAAGCG 61.897 63.158 0.00 0.00 0.00 4.68
343 344 2.591715 AGGTGTGGTGTCAAGCGC 60.592 61.111 0.00 0.00 34.84 5.92
344 345 2.899838 GGTGTGGTGTCAAGCGCA 60.900 61.111 11.47 0.00 41.78 6.09
345 346 2.477176 GGTGTGGTGTCAAGCGCAA 61.477 57.895 11.47 0.00 45.22 4.85
346 347 1.431440 GTGTGGTGTCAAGCGCAAA 59.569 52.632 11.47 0.00 45.22 3.68
347 348 0.030638 GTGTGGTGTCAAGCGCAAAT 59.969 50.000 11.47 0.00 45.22 2.32
348 349 1.265635 GTGTGGTGTCAAGCGCAAATA 59.734 47.619 11.47 0.00 45.22 1.40
349 350 1.265635 TGTGGTGTCAAGCGCAAATAC 59.734 47.619 11.47 2.36 41.12 1.89
350 351 0.515127 TGGTGTCAAGCGCAAATACG 59.485 50.000 11.47 0.00 0.00 3.06
351 352 0.515564 GGTGTCAAGCGCAAATACGT 59.484 50.000 11.47 0.00 34.88 3.57
352 353 1.069500 GGTGTCAAGCGCAAATACGTT 60.069 47.619 11.47 0.00 34.88 3.99
353 354 2.230864 GTGTCAAGCGCAAATACGTTC 58.769 47.619 11.47 0.00 34.88 3.95
354 355 2.096417 GTGTCAAGCGCAAATACGTTCT 60.096 45.455 11.47 0.00 34.88 3.01
355 356 2.096466 TGTCAAGCGCAAATACGTTCTG 60.096 45.455 11.47 0.00 34.88 3.02
356 357 1.136085 TCAAGCGCAAATACGTTCTGC 60.136 47.619 11.47 0.00 34.88 4.26
357 358 1.135972 CAAGCGCAAATACGTTCTGCT 60.136 47.619 11.47 3.82 33.82 4.24
358 359 2.004583 AGCGCAAATACGTTCTGCTA 57.995 45.000 11.47 0.00 33.82 3.49
359 360 2.550978 AGCGCAAATACGTTCTGCTAT 58.449 42.857 11.47 1.24 33.82 2.97
360 361 2.540101 AGCGCAAATACGTTCTGCTATC 59.460 45.455 11.47 4.30 33.82 2.08
361 362 2.540101 GCGCAAATACGTTCTGCTATCT 59.460 45.455 0.30 0.00 33.82 1.98
362 363 3.001330 GCGCAAATACGTTCTGCTATCTT 59.999 43.478 0.30 0.00 33.82 2.40
363 364 4.494199 GCGCAAATACGTTCTGCTATCTTT 60.494 41.667 0.30 0.00 33.82 2.52
364 365 5.560148 CGCAAATACGTTCTGCTATCTTTT 58.440 37.500 12.50 0.00 33.82 2.27
365 366 5.672856 CGCAAATACGTTCTGCTATCTTTTC 59.327 40.000 12.50 0.00 33.82 2.29
366 367 6.542852 GCAAATACGTTCTGCTATCTTTTCA 58.457 36.000 0.00 0.00 33.20 2.69
367 368 6.684555 GCAAATACGTTCTGCTATCTTTTCAG 59.315 38.462 0.00 0.00 33.20 3.02
368 369 7.624344 GCAAATACGTTCTGCTATCTTTTCAGT 60.624 37.037 0.00 0.00 33.20 3.41
369 370 7.907214 AATACGTTCTGCTATCTTTTCAGTT 57.093 32.000 0.00 0.00 0.00 3.16
370 371 7.907214 ATACGTTCTGCTATCTTTTCAGTTT 57.093 32.000 0.00 0.00 0.00 2.66
371 372 6.619801 ACGTTCTGCTATCTTTTCAGTTTT 57.380 33.333 0.00 0.00 0.00 2.43
372 373 7.724305 ACGTTCTGCTATCTTTTCAGTTTTA 57.276 32.000 0.00 0.00 0.00 1.52
373 374 8.324163 ACGTTCTGCTATCTTTTCAGTTTTAT 57.676 30.769 0.00 0.00 0.00 1.40
374 375 8.443937 ACGTTCTGCTATCTTTTCAGTTTTATC 58.556 33.333 0.00 0.00 0.00 1.75
375 376 8.443160 CGTTCTGCTATCTTTTCAGTTTTATCA 58.557 33.333 0.00 0.00 0.00 2.15
378 379 9.453572 TCTGCTATCTTTTCAGTTTTATCATGT 57.546 29.630 0.00 0.00 0.00 3.21
379 380 9.499585 CTGCTATCTTTTCAGTTTTATCATGTG 57.500 33.333 0.00 0.00 0.00 3.21
380 381 9.013229 TGCTATCTTTTCAGTTTTATCATGTGT 57.987 29.630 0.00 0.00 0.00 3.72
381 382 9.282247 GCTATCTTTTCAGTTTTATCATGTGTG 57.718 33.333 0.00 0.00 0.00 3.82
384 385 8.450578 TCTTTTCAGTTTTATCATGTGTGTCT 57.549 30.769 0.00 0.00 0.00 3.41
385 386 8.902806 TCTTTTCAGTTTTATCATGTGTGTCTT 58.097 29.630 0.00 0.00 0.00 3.01
386 387 9.520204 CTTTTCAGTTTTATCATGTGTGTCTTT 57.480 29.630 0.00 0.00 0.00 2.52
390 391 9.283768 TCAGTTTTATCATGTGTGTCTTTATGT 57.716 29.630 0.00 0.00 0.00 2.29
391 392 9.333497 CAGTTTTATCATGTGTGTCTTTATGTG 57.667 33.333 0.00 0.00 0.00 3.21
392 393 9.283768 AGTTTTATCATGTGTGTCTTTATGTGA 57.716 29.630 0.00 0.00 0.00 3.58
393 394 9.891828 GTTTTATCATGTGTGTCTTTATGTGAA 57.108 29.630 0.00 0.00 0.00 3.18
473 474 3.206246 CGTGCACCAACCAACGGT 61.206 61.111 12.15 0.00 37.65 4.83
517 518 3.116531 CCTTTTCCGCCGTCGTCC 61.117 66.667 0.00 0.00 0.00 4.79
522 524 3.562779 TTCCGCCGTCGTCCTCAAC 62.563 63.158 0.00 0.00 0.00 3.18
557 562 0.248866 CACCAAACAAGCGTCCAACC 60.249 55.000 0.00 0.00 0.00 3.77
565 570 1.164041 AAGCGTCCAACCGAAACCTG 61.164 55.000 0.00 0.00 0.00 4.00
576 581 0.790814 CGAAACCTGTCTTCGCTTCC 59.209 55.000 0.00 0.00 39.22 3.46
580 585 1.738099 CCTGTCTTCGCTTCCACGG 60.738 63.158 0.00 0.00 0.00 4.94
593 598 2.032071 CACGGAACACCTCCCCAC 59.968 66.667 0.00 0.00 41.87 4.61
608 613 2.049433 CACCCCGATACGCGATCC 60.049 66.667 15.93 0.00 44.57 3.36
669 677 2.287373 CCGGTATATAGGACGATCGAGC 59.713 54.545 24.34 13.00 0.00 5.03
711 719 0.171903 CACGTTACGTCGATCCCCTT 59.828 55.000 7.67 0.00 38.32 3.95
712 720 0.453390 ACGTTACGTCGATCCCCTTC 59.547 55.000 3.95 0.00 33.69 3.46
713 721 0.248784 CGTTACGTCGATCCCCTTCC 60.249 60.000 0.00 0.00 0.00 3.46
714 722 0.819582 GTTACGTCGATCCCCTTCCA 59.180 55.000 0.00 0.00 0.00 3.53
715 723 0.819582 TTACGTCGATCCCCTTCCAC 59.180 55.000 0.00 0.00 0.00 4.02
716 724 1.378882 TACGTCGATCCCCTTCCACG 61.379 60.000 0.00 0.00 0.00 4.94
717 725 2.707849 CGTCGATCCCCTTCCACGT 61.708 63.158 0.00 0.00 0.00 4.49
718 726 1.141234 GTCGATCCCCTTCCACGTC 59.859 63.158 0.00 0.00 0.00 4.34
719 727 2.056223 TCGATCCCCTTCCACGTCC 61.056 63.158 0.00 0.00 0.00 4.79
720 728 2.499685 GATCCCCTTCCACGTCCG 59.500 66.667 0.00 0.00 0.00 4.79
721 729 3.735037 GATCCCCTTCCACGTCCGC 62.735 68.421 0.00 0.00 0.00 5.54
731 739 4.719369 ACGTCCGCTCACCGCTTC 62.719 66.667 0.00 0.00 36.13 3.86
743 751 0.746923 ACCGCTTCTTTAATCCCGCC 60.747 55.000 0.00 0.00 0.00 6.13
744 752 0.463833 CCGCTTCTTTAATCCCGCCT 60.464 55.000 0.00 0.00 0.00 5.52
761 769 2.598565 GCCTCCCCATTTCTTTATCCC 58.401 52.381 0.00 0.00 0.00 3.85
762 770 2.756576 GCCTCCCCATTTCTTTATCCCC 60.757 54.545 0.00 0.00 0.00 4.81
763 771 2.489073 CCTCCCCATTTCTTTATCCCCG 60.489 54.545 0.00 0.00 0.00 5.73
764 772 1.133606 TCCCCATTTCTTTATCCCCGC 60.134 52.381 0.00 0.00 0.00 6.13
765 773 1.328279 CCCATTTCTTTATCCCCGCC 58.672 55.000 0.00 0.00 0.00 6.13
766 774 1.410932 CCCATTTCTTTATCCCCGCCA 60.411 52.381 0.00 0.00 0.00 5.69
767 775 1.681264 CCATTTCTTTATCCCCGCCAC 59.319 52.381 0.00 0.00 0.00 5.01
768 776 1.333619 CATTTCTTTATCCCCGCCACG 59.666 52.381 0.00 0.00 0.00 4.94
769 777 1.027792 TTTCTTTATCCCCGCCACGC 61.028 55.000 0.00 0.00 0.00 5.34
770 778 2.124901 CTTTATCCCCGCCACGCA 60.125 61.111 0.00 0.00 0.00 5.24
785 793 1.115326 ACGCAGATCGGGGATCATCA 61.115 55.000 16.48 0.00 41.12 3.07
808 824 1.019673 CATCATTCTTCACCTGCCCG 58.980 55.000 0.00 0.00 0.00 6.13
809 825 0.749454 ATCATTCTTCACCTGCCCGC 60.749 55.000 0.00 0.00 0.00 6.13
810 826 1.675310 CATTCTTCACCTGCCCGCA 60.675 57.895 0.00 0.00 0.00 5.69
832 848 2.189521 GGTTGCACCGATCGGGAT 59.810 61.111 35.87 15.50 39.97 3.85
833 849 1.451387 GGTTGCACCGATCGGGATT 60.451 57.895 35.87 14.70 39.97 3.01
834 850 1.436983 GGTTGCACCGATCGGGATTC 61.437 60.000 35.87 21.35 39.97 2.52
852 868 1.811266 CGGGACACAGCGAATGGAG 60.811 63.158 0.00 0.00 0.00 3.86
881 900 1.447314 CGCCTCGTTTGACCTACCC 60.447 63.158 0.00 0.00 0.00 3.69
882 901 1.885163 CGCCTCGTTTGACCTACCCT 61.885 60.000 0.00 0.00 0.00 4.34
884 903 1.944430 GCCTCGTTTGACCTACCCTTG 60.944 57.143 0.00 0.00 0.00 3.61
891 910 5.105635 TCGTTTGACCTACCCTTGTATACTG 60.106 44.000 4.17 0.00 0.00 2.74
893 912 3.036091 TGACCTACCCTTGTATACTGCC 58.964 50.000 4.17 0.00 0.00 4.85
900 919 1.765314 CCTTGTATACTGCCCTGAGCT 59.235 52.381 4.17 0.00 44.23 4.09
904 923 2.228059 GTATACTGCCCTGAGCTCGTA 58.772 52.381 9.64 4.32 44.23 3.43
905 924 1.033574 ATACTGCCCTGAGCTCGTAC 58.966 55.000 9.64 0.00 44.23 3.67
906 925 1.374343 TACTGCCCTGAGCTCGTACG 61.374 60.000 9.53 9.53 44.23 3.67
907 926 3.417275 CTGCCCTGAGCTCGTACGG 62.417 68.421 16.52 7.41 44.23 4.02
908 927 4.874977 GCCCTGAGCTCGTACGGC 62.875 72.222 16.52 17.12 38.99 5.68
935 954 3.499737 CGCTGGATGCCCACGTTC 61.500 66.667 0.00 0.00 37.58 3.95
936 955 2.045926 GCTGGATGCCCACGTTCT 60.046 61.111 0.00 0.00 37.58 3.01
1052 1077 4.509737 GCACCTCCCCGTCTACGC 62.510 72.222 0.00 0.00 38.18 4.42
1055 1080 3.072468 CCTCCCCGTCTACGCCAA 61.072 66.667 0.00 0.00 38.18 4.52
1075 1100 2.741985 CACCAATGGAGACGCGCA 60.742 61.111 6.16 0.00 0.00 6.09
1103 1128 1.852067 AATGGCGGTGCGTTCTTGAC 61.852 55.000 0.00 0.00 0.00 3.18
1245 1270 2.504244 GGCGTCAACGTCTCCTCG 60.504 66.667 4.29 0.00 41.36 4.63
1385 1410 0.253630 TTCAGGGGCCTCCAGGTATT 60.254 55.000 0.00 0.00 38.24 1.89
1386 1411 0.253630 TCAGGGGCCTCCAGGTATTT 60.254 55.000 0.00 0.00 38.24 1.40
1387 1412 0.183731 CAGGGGCCTCCAGGTATTTC 59.816 60.000 0.00 0.00 38.24 2.17
1388 1413 0.994050 AGGGGCCTCCAGGTATTTCC 60.994 60.000 0.00 0.00 38.24 3.13
1390 1415 0.474614 GGGCCTCCAGGTATTTCCTC 59.525 60.000 0.84 0.00 46.24 3.71
1400 1428 2.803817 TATTTCCTCGCCGCCTCCC 61.804 63.158 0.00 0.00 0.00 4.30
1417 1445 5.625197 CGCCTCCCATCAAATTCAGAAAAAT 60.625 40.000 0.00 0.00 0.00 1.82
1436 1474 2.473816 ATCGCATGTTCGATCACGATT 58.526 42.857 13.29 2.76 44.97 3.34
1439 1477 5.606011 ATCGCATGTTCGATCACGATTACC 61.606 45.833 13.29 0.00 44.97 2.85
1445 1483 1.067060 TCGATCACGATTACCTGCCTG 59.933 52.381 0.00 0.00 43.81 4.85
1446 1484 1.221414 GATCACGATTACCTGCCTGC 58.779 55.000 0.00 0.00 0.00 4.85
1448 1486 1.819632 CACGATTACCTGCCTGCCC 60.820 63.158 0.00 0.00 0.00 5.36
1449 1487 2.588877 CGATTACCTGCCTGCCCG 60.589 66.667 0.00 0.00 0.00 6.13
1450 1488 2.203209 GATTACCTGCCTGCCCGG 60.203 66.667 0.00 0.00 0.00 5.73
1460 1498 4.100084 CTGCCCGGCCATCACTGA 62.100 66.667 7.03 0.00 0.00 3.41
1461 1499 3.410628 TGCCCGGCCATCACTGAT 61.411 61.111 7.03 0.00 0.00 2.90
1462 1500 2.592861 GCCCGGCCATCACTGATC 60.593 66.667 2.24 0.00 0.00 2.92
1463 1501 2.111878 CCCGGCCATCACTGATCC 59.888 66.667 2.24 0.00 0.00 3.36
1464 1502 2.111878 CCGGCCATCACTGATCCC 59.888 66.667 2.24 0.00 0.00 3.85
1465 1503 2.446848 CCGGCCATCACTGATCCCT 61.447 63.158 2.24 0.00 0.00 4.20
1466 1504 1.528824 CGGCCATCACTGATCCCTT 59.471 57.895 2.24 0.00 0.00 3.95
1467 1505 0.758734 CGGCCATCACTGATCCCTTA 59.241 55.000 2.24 0.00 0.00 2.69
1468 1506 1.140852 CGGCCATCACTGATCCCTTAA 59.859 52.381 2.24 0.00 0.00 1.85
1477 1515 7.148171 CCATCACTGATCCCTTAAGTTTTCTTC 60.148 40.741 0.97 0.00 40.91 2.87
1520 1558 5.759506 TCTTCCTCTCTGATTGTACGATC 57.240 43.478 15.25 15.25 0.00 3.69
1526 1564 3.875134 TCTCTGATTGTACGATCGCTGTA 59.125 43.478 16.60 0.00 0.00 2.74
1536 1577 2.037649 CGATCGCTGTACTCGTTCATC 58.962 52.381 0.26 8.14 0.00 2.92
1537 1578 2.286477 CGATCGCTGTACTCGTTCATCT 60.286 50.000 0.26 0.00 0.00 2.90
1538 1579 2.544480 TCGCTGTACTCGTTCATCTG 57.456 50.000 7.70 0.00 0.00 2.90
1542 1583 2.164624 GCTGTACTCGTTCATCTGGTCT 59.835 50.000 0.00 0.00 0.00 3.85
1562 1607 6.096141 TGGTCTCAGACTGCAACATTTTAAAA 59.904 34.615 4.40 2.51 32.47 1.52
1565 1610 9.034544 GTCTCAGACTGCAACATTTTAAAATTT 57.965 29.630 10.77 2.12 0.00 1.82
1567 1612 9.853921 CTCAGACTGCAACATTTTAAAATTTTC 57.146 29.630 10.77 6.53 0.00 2.29
1568 1613 9.598517 TCAGACTGCAACATTTTAAAATTTTCT 57.401 25.926 10.77 2.23 0.00 2.52
1569 1614 9.640974 CAGACTGCAACATTTTAAAATTTTCTG 57.359 29.630 10.77 10.04 0.00 3.02
1571 1616 7.125113 ACTGCAACATTTTAAAATTTTCTGCG 58.875 30.769 10.77 13.41 0.00 5.18
1572 1617 5.906285 TGCAACATTTTAAAATTTTCTGCGC 59.094 32.000 10.77 10.65 0.00 6.09
1573 1618 5.339348 GCAACATTTTAAAATTTTCTGCGCC 59.661 36.000 10.77 0.00 0.00 6.53
1575 1620 6.226988 ACATTTTAAAATTTTCTGCGCCTG 57.773 33.333 10.77 0.00 0.00 4.85
1576 1621 5.757808 ACATTTTAAAATTTTCTGCGCCTGT 59.242 32.000 10.77 0.67 0.00 4.00
1577 1622 6.259829 ACATTTTAAAATTTTCTGCGCCTGTT 59.740 30.769 10.77 0.00 0.00 3.16
1578 1623 5.898630 TTTAAAATTTTCTGCGCCTGTTC 57.101 34.783 6.72 0.00 0.00 3.18
1579 1624 3.733443 AAAATTTTCTGCGCCTGTTCT 57.267 38.095 4.18 0.00 0.00 3.01
1580 1625 2.997485 AATTTTCTGCGCCTGTTCTC 57.003 45.000 4.18 0.00 0.00 2.87
1581 1626 2.191128 ATTTTCTGCGCCTGTTCTCT 57.809 45.000 4.18 0.00 0.00 3.10
1582 1627 1.512926 TTTTCTGCGCCTGTTCTCTC 58.487 50.000 4.18 0.00 0.00 3.20
1583 1628 0.667487 TTTCTGCGCCTGTTCTCTCG 60.667 55.000 4.18 0.00 0.00 4.04
1584 1629 1.806461 TTCTGCGCCTGTTCTCTCGT 61.806 55.000 4.18 0.00 0.00 4.18
1585 1630 2.049156 TGCGCCTGTTCTCTCGTG 60.049 61.111 4.18 0.00 0.00 4.35
1586 1631 2.258591 GCGCCTGTTCTCTCGTGA 59.741 61.111 0.00 0.00 0.00 4.35
1587 1632 1.153745 GCGCCTGTTCTCTCGTGAT 60.154 57.895 0.00 0.00 0.00 3.06
1588 1633 0.100682 GCGCCTGTTCTCTCGTGATA 59.899 55.000 0.00 0.00 0.00 2.15
1589 1634 1.469251 GCGCCTGTTCTCTCGTGATAA 60.469 52.381 0.00 0.00 0.00 1.75
1590 1635 2.876091 CGCCTGTTCTCTCGTGATAAA 58.124 47.619 0.00 0.00 0.00 1.40
1591 1636 3.250744 CGCCTGTTCTCTCGTGATAAAA 58.749 45.455 0.00 0.00 0.00 1.52
1611 1656 5.604758 AAATCTCTCGACCTGATGAATCA 57.395 39.130 0.00 0.00 35.16 2.57
1639 1684 2.161211 GTGAATGAAGGAGCTCAAGCAC 59.839 50.000 17.19 9.30 45.16 4.40
1650 1695 2.618241 AGCTCAAGCACAATTTCGTCAA 59.382 40.909 4.59 0.00 45.16 3.18
1663 1708 1.328279 TCGTCAAGAAGGAGCAGTCA 58.672 50.000 0.00 0.00 0.00 3.41
1705 1750 6.360370 AGACTTCTACAGATGGCAACTTTA 57.640 37.500 0.00 0.00 37.61 1.85
1729 1774 0.890683 CCACCAAGGTTTGATCCTGC 59.109 55.000 0.00 0.00 37.93 4.85
1732 1777 1.180029 CCAAGGTTTGATCCTGCCAG 58.820 55.000 0.00 0.00 37.93 4.85
1777 1822 5.010012 ACTTTCTGCAACTGTATTTGGGAAG 59.990 40.000 0.00 0.00 0.00 3.46
1790 1835 8.677148 TGTATTTGGGAAGTTGCTATATCTTC 57.323 34.615 0.00 0.00 37.44 2.87
1810 1860 3.743521 TCACTTTTACTGATGCTGCACT 58.256 40.909 3.57 0.00 0.00 4.40
1844 1894 1.991264 CAGTGCAGAACGAGTCAGATG 59.009 52.381 0.00 0.00 0.00 2.90
1845 1895 1.889170 AGTGCAGAACGAGTCAGATGA 59.111 47.619 0.00 0.00 0.00 2.92
1945 1995 5.444663 AAGAAGGTGAAGCTTCATTCAAC 57.555 39.130 30.47 20.04 45.45 3.18
1949 1999 3.960102 AGGTGAAGCTTCATTCAACCAAA 59.040 39.130 30.65 1.91 46.11 3.28
1951 2001 4.687483 GGTGAAGCTTCATTCAACCAAATG 59.313 41.667 30.65 0.00 40.36 2.32
1964 2014 8.649841 CATTCAACCAAATGCAAATAGTTACTG 58.350 33.333 0.00 0.00 30.45 2.74
1965 2015 7.283625 TCAACCAAATGCAAATAGTTACTGT 57.716 32.000 0.00 0.00 0.00 3.55
1966 2016 7.367285 TCAACCAAATGCAAATAGTTACTGTC 58.633 34.615 0.00 0.00 0.00 3.51
1968 2018 6.913170 ACCAAATGCAAATAGTTACTGTCAG 58.087 36.000 0.00 0.00 0.00 3.51
1970 2020 7.663905 ACCAAATGCAAATAGTTACTGTCAGTA 59.336 33.333 8.70 8.70 0.00 2.74
1972 2022 8.721478 CAAATGCAAATAGTTACTGTCAGTACT 58.279 33.333 12.37 14.09 28.93 2.73
1973 2023 8.848474 AATGCAAATAGTTACTGTCAGTACTT 57.152 30.769 12.37 6.46 28.93 2.24
2012 2062 5.592282 TGCTTCTTGACACTGAATTTGGTTA 59.408 36.000 0.00 0.00 0.00 2.85
2030 2080 3.551250 GGTTAATCTCAGAGCCTAGCGAC 60.551 52.174 0.00 0.00 0.00 5.19
2042 2092 1.403647 CCTAGCGACGACAACAATGGA 60.404 52.381 0.00 0.00 0.00 3.41
2084 2134 4.043200 GGCCTGAACCAACAGCGC 62.043 66.667 0.00 0.00 36.67 5.92
2124 2174 4.633126 AGTGTTTGGATCATCACAAGATCG 59.367 41.667 0.00 0.00 42.16 3.69
2125 2175 4.631377 GTGTTTGGATCATCACAAGATCGA 59.369 41.667 0.00 0.00 42.16 3.59
2164 2215 3.308438 TGGTACCTAAACGAGCTTCAC 57.692 47.619 14.36 0.00 0.00 3.18
2168 2219 4.321824 GGTACCTAAACGAGCTTCACTCTT 60.322 45.833 4.06 0.00 43.85 2.85
2217 2268 1.456296 CAGCTCTGCTTAATGCCACA 58.544 50.000 0.00 0.00 42.00 4.17
2220 2271 1.131883 GCTCTGCTTAATGCCACACTG 59.868 52.381 0.00 0.00 42.00 3.66
2301 2352 3.974912 TGAACCGTGTGACAAATACGTA 58.025 40.909 0.00 0.00 36.17 3.57
2304 2355 4.764679 ACCGTGTGACAAATACGTACTA 57.235 40.909 0.00 0.00 36.17 1.82
2306 2357 4.023279 ACCGTGTGACAAATACGTACTACA 60.023 41.667 0.00 0.00 36.17 2.74
2331 2388 9.575783 CAGTAGTAGTTACTCATTTTTCTCTCC 57.424 37.037 0.00 0.00 40.68 3.71
2332 2389 8.460428 AGTAGTAGTTACTCATTTTTCTCTCCG 58.540 37.037 0.00 0.00 38.20 4.63
2333 2390 7.463961 AGTAGTTACTCATTTTTCTCTCCGA 57.536 36.000 0.00 0.00 0.00 4.55
2334 2391 7.314393 AGTAGTTACTCATTTTTCTCTCCGAC 58.686 38.462 0.00 0.00 0.00 4.79
2335 2392 6.097915 AGTTACTCATTTTTCTCTCCGACA 57.902 37.500 0.00 0.00 0.00 4.35
2342 2399 6.273825 TCATTTTTCTCTCCGACATAGTAGC 58.726 40.000 0.00 0.00 0.00 3.58
2476 2533 2.640316 AAGATTTACCGCCCCATCTC 57.360 50.000 0.00 0.00 0.00 2.75
2516 2573 3.007635 GCAATCGGTAGCCAAGTTAGTT 58.992 45.455 0.00 0.00 0.00 2.24
2561 2619 6.182039 TCAGACTGTTTTGTTTCTTCAGTG 57.818 37.500 1.59 0.00 39.08 3.66
2579 2637 3.629398 CAGTGCCCTTTATTCATCTCACC 59.371 47.826 0.00 0.00 0.00 4.02
2597 2655 2.124570 CGCCCCCTTGATCACAGG 60.125 66.667 13.87 13.87 0.00 4.00
2599 2657 1.384191 GCCCCCTTGATCACAGGTT 59.616 57.895 17.40 0.00 0.00 3.50
2605 2663 2.618053 CCTTGATCACAGGTTACCGAC 58.382 52.381 13.02 0.00 0.00 4.79
2660 2718 0.325933 CATCAGAACTGCACTCCCCA 59.674 55.000 0.00 0.00 0.00 4.96
2701 2759 0.688487 TTCATTTCCTCGGGTTCGGT 59.312 50.000 0.00 0.00 36.95 4.69
2766 2824 3.770933 ACATTTCATCCCCCTTGACATTG 59.229 43.478 0.00 0.00 0.00 2.82
2797 2859 4.227512 TGAACTGATGAACAATGCACAC 57.772 40.909 0.00 0.00 0.00 3.82
2798 2860 3.004629 TGAACTGATGAACAATGCACACC 59.995 43.478 0.00 0.00 0.00 4.16
2810 2872 3.941188 CACACCGCACCACCTCCT 61.941 66.667 0.00 0.00 0.00 3.69
2817 2879 1.230635 CGCACCACCTCCTTCAACAG 61.231 60.000 0.00 0.00 0.00 3.16
2851 2913 1.534729 ATCTTCCAAGAAACACGCCC 58.465 50.000 0.00 0.00 38.77 6.13
2859 2921 1.299850 GAAACACGCCCCTGTTTGC 60.300 57.895 6.60 0.00 43.05 3.68
2865 2927 2.753966 CGCCCCTGTTTGCTCATCG 61.754 63.158 0.00 0.00 0.00 3.84
2874 2936 2.253603 GTTTGCTCATCGGATGTTTGC 58.746 47.619 17.01 17.97 0.00 3.68
2875 2937 1.532523 TTGCTCATCGGATGTTTGCA 58.467 45.000 21.75 21.75 33.35 4.08
3012 3074 1.088340 CGGAGATGGACAAGCAGCTG 61.088 60.000 10.11 10.11 0.00 4.24
3052 3114 4.468689 GGCCGTTCGGGGAGAAGG 62.469 72.222 13.16 0.00 42.58 3.46
3094 3159 2.184579 GGTACCTCGCTCTGCACC 59.815 66.667 4.06 0.00 0.00 5.01
3264 3345 1.742880 GATCACGCTGCTCTGCCAA 60.743 57.895 0.00 0.00 0.00 4.52
3278 3359 4.515361 CTCTGCCAAGATCTTCACTGATT 58.485 43.478 4.57 0.00 0.00 2.57
3279 3360 4.259356 TCTGCCAAGATCTTCACTGATTG 58.741 43.478 4.57 0.00 0.00 2.67
3280 3361 3.349927 TGCCAAGATCTTCACTGATTGG 58.650 45.455 4.57 3.08 31.09 3.16
3282 3363 3.760684 GCCAAGATCTTCACTGATTGGTT 59.239 43.478 4.57 0.00 30.77 3.67
3283 3364 4.943705 GCCAAGATCTTCACTGATTGGTTA 59.056 41.667 4.57 0.00 30.77 2.85
3320 3429 1.334599 GCGGTGGTTGTGTTGTGTATG 60.335 52.381 0.00 0.00 0.00 2.39
3586 3695 3.247648 CGGGTAAGCGATCGAAATCATTT 59.752 43.478 21.57 3.39 31.76 2.32
3620 3861 6.418057 ACAGTTTCTGAATCTGAACTCTCT 57.582 37.500 26.80 7.33 35.18 3.10
3621 3862 6.454795 ACAGTTTCTGAATCTGAACTCTCTC 58.545 40.000 26.80 0.00 35.18 3.20
3625 3866 5.398603 TCTGAATCTGAACTCTCTCAACC 57.601 43.478 0.00 0.00 0.00 3.77
3634 3875 0.528470 CTCTCTCAACCCTGTCGACC 59.472 60.000 14.12 0.00 0.00 4.79
3650 3891 0.166379 GACCGACGAGTCTGACTGAC 59.834 60.000 16.28 4.39 45.67 3.51
3660 3901 3.281341 GTCTGACTGACTGACTGACTG 57.719 52.381 0.00 0.00 42.21 3.51
3661 3902 2.030363 GTCTGACTGACTGACTGACTGG 60.030 54.545 0.00 0.00 42.21 4.00
3873 4114 4.410400 GTGGGCCGGGTTCCAGAG 62.410 72.222 2.18 0.00 33.13 3.35
3884 4125 1.081092 TTCCAGAGGAGGGTGAGGG 59.919 63.158 0.00 0.00 31.21 4.30
4022 4267 5.116180 TCTGAATTTTCTGTTCTGACACGT 58.884 37.500 0.00 0.00 31.38 4.49
4025 4270 3.398954 TTTTCTGTTCTGACACGTTGC 57.601 42.857 0.00 0.00 0.00 4.17
4032 4277 0.605319 TCTGACACGTTGCCCATTCC 60.605 55.000 0.00 0.00 0.00 3.01
4072 4317 6.561945 TTTGTTTCGTTCTTTTGTGCATAC 57.438 33.333 0.00 0.00 0.00 2.39
4073 4318 5.236655 TGTTTCGTTCTTTTGTGCATACA 57.763 34.783 0.00 0.00 34.31 2.29
4133 4400 4.101741 GGCAGGTTCAGTTGAGAGGTATAT 59.898 45.833 0.00 0.00 0.00 0.86
4201 4468 6.295123 GGGAGAGTTGTACAGAAAGTGACATA 60.295 42.308 0.00 0.00 0.00 2.29
4202 4469 7.324178 GGAGAGTTGTACAGAAAGTGACATAT 58.676 38.462 0.00 0.00 0.00 1.78
4203 4470 8.467598 GGAGAGTTGTACAGAAAGTGACATATA 58.532 37.037 0.00 0.00 0.00 0.86
4206 4473 9.803315 GAGTTGTACAGAAAGTGACATATATCA 57.197 33.333 0.00 0.00 0.00 2.15
4209 4476 8.593492 TGTACAGAAAGTGACATATATCATGC 57.407 34.615 0.00 0.00 0.00 4.06
4210 4477 8.424133 TGTACAGAAAGTGACATATATCATGCT 58.576 33.333 0.00 0.00 0.00 3.79
4211 4478 9.265901 GTACAGAAAGTGACATATATCATGCTT 57.734 33.333 0.00 0.00 0.00 3.91
4237 4504 1.204704 CTGTTCGGATGCACTCCACTA 59.795 52.381 13.41 0.00 45.24 2.74
4435 4723 2.649034 CTGGTCGTACTGCCGTGT 59.351 61.111 0.00 0.00 0.00 4.49
4726 5014 1.597461 GCTGCCGAGGGAGTACTTT 59.403 57.895 12.20 0.00 35.92 2.66
4782 5070 1.078567 GCTCTTCAGACCTGCTGGG 60.079 63.158 14.82 4.64 44.98 4.45
4961 5255 3.085533 AGAGTAGCTGCGAGAGAGAAAA 58.914 45.455 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.760192 TCCGCTCCTCAACTACCTAC 58.240 55.000 0.00 0.00 0.00 3.18
1 2 2.307768 CATCCGCTCCTCAACTACCTA 58.692 52.381 0.00 0.00 0.00 3.08
2 3 1.115467 CATCCGCTCCTCAACTACCT 58.885 55.000 0.00 0.00 0.00 3.08
3 4 0.530870 GCATCCGCTCCTCAACTACC 60.531 60.000 0.00 0.00 34.30 3.18
4 5 0.175760 TGCATCCGCTCCTCAACTAC 59.824 55.000 0.00 0.00 39.64 2.73
5 6 0.461548 CTGCATCCGCTCCTCAACTA 59.538 55.000 0.00 0.00 39.64 2.24
6 7 1.220206 CTGCATCCGCTCCTCAACT 59.780 57.895 0.00 0.00 39.64 3.16
7 8 1.086634 GTCTGCATCCGCTCCTCAAC 61.087 60.000 0.00 0.00 39.64 3.18
8 9 1.219124 GTCTGCATCCGCTCCTCAA 59.781 57.895 0.00 0.00 39.64 3.02
9 10 1.683707 AGTCTGCATCCGCTCCTCA 60.684 57.895 0.00 0.00 39.64 3.86
10 11 1.227205 CAGTCTGCATCCGCTCCTC 60.227 63.158 0.00 0.00 39.64 3.71
11 12 1.986757 ACAGTCTGCATCCGCTCCT 60.987 57.895 0.00 0.00 39.64 3.69
12 13 1.812922 CACAGTCTGCATCCGCTCC 60.813 63.158 0.00 0.00 39.64 4.70
13 14 1.812922 CCACAGTCTGCATCCGCTC 60.813 63.158 0.00 0.00 39.64 5.03
14 15 2.267006 CCACAGTCTGCATCCGCT 59.733 61.111 0.00 0.00 39.64 5.52
15 16 2.046892 ACCACAGTCTGCATCCGC 60.047 61.111 0.00 0.00 39.24 5.54
16 17 4.192000 GACCACAGTCTGCATCCG 57.808 61.111 0.00 0.00 40.10 4.18
24 25 0.038251 TCGTGATGCAGACCACAGTC 60.038 55.000 14.36 0.00 43.89 3.51
25 26 0.319900 GTCGTGATGCAGACCACAGT 60.320 55.000 14.36 0.00 33.13 3.55
26 27 0.319813 TGTCGTGATGCAGACCACAG 60.320 55.000 14.36 8.75 36.61 3.66
27 28 0.321346 ATGTCGTGATGCAGACCACA 59.679 50.000 14.36 8.86 36.61 4.17
28 29 1.002366 GATGTCGTGATGCAGACCAC 58.998 55.000 0.00 0.00 36.61 4.16
29 30 0.897621 AGATGTCGTGATGCAGACCA 59.102 50.000 0.00 0.00 36.61 4.02
30 31 1.284657 CAGATGTCGTGATGCAGACC 58.715 55.000 0.00 0.00 36.61 3.85
31 32 1.134995 TCCAGATGTCGTGATGCAGAC 60.135 52.381 0.00 0.00 37.85 3.51
32 33 1.185315 TCCAGATGTCGTGATGCAGA 58.815 50.000 0.00 0.00 0.00 4.26
33 34 1.931841 CTTCCAGATGTCGTGATGCAG 59.068 52.381 0.00 0.00 0.00 4.41
34 35 1.550072 TCTTCCAGATGTCGTGATGCA 59.450 47.619 0.00 0.00 0.00 3.96
35 36 1.929836 GTCTTCCAGATGTCGTGATGC 59.070 52.381 0.00 0.00 0.00 3.91
36 37 3.236632 TGTCTTCCAGATGTCGTGATG 57.763 47.619 0.00 0.00 0.00 3.07
37 38 3.961480 TTGTCTTCCAGATGTCGTGAT 57.039 42.857 0.00 0.00 0.00 3.06
38 39 3.653344 CTTTGTCTTCCAGATGTCGTGA 58.347 45.455 0.00 0.00 0.00 4.35
39 40 2.158449 GCTTTGTCTTCCAGATGTCGTG 59.842 50.000 0.00 0.00 0.00 4.35
40 41 2.417719 GCTTTGTCTTCCAGATGTCGT 58.582 47.619 0.00 0.00 0.00 4.34
41 42 1.391485 CGCTTTGTCTTCCAGATGTCG 59.609 52.381 0.00 0.00 0.00 4.35
42 43 2.158449 CACGCTTTGTCTTCCAGATGTC 59.842 50.000 0.00 0.00 0.00 3.06
43 44 2.146342 CACGCTTTGTCTTCCAGATGT 58.854 47.619 0.00 0.00 0.00 3.06
44 45 2.096069 CACACGCTTTGTCTTCCAGATG 60.096 50.000 0.00 0.00 35.67 2.90
45 46 2.146342 CACACGCTTTGTCTTCCAGAT 58.854 47.619 0.00 0.00 35.67 2.90
46 47 1.581934 CACACGCTTTGTCTTCCAGA 58.418 50.000 0.00 0.00 35.67 3.86
47 48 0.040958 GCACACGCTTTGTCTTCCAG 60.041 55.000 0.00 0.00 35.67 3.86
48 49 2.021722 GCACACGCTTTGTCTTCCA 58.978 52.632 0.00 0.00 35.67 3.53
49 50 4.922791 GCACACGCTTTGTCTTCC 57.077 55.556 0.00 0.00 35.67 3.46
61 62 4.626081 ACCACGAGCCCAGCACAC 62.626 66.667 0.00 0.00 0.00 3.82
62 63 3.825160 GAACCACGAGCCCAGCACA 62.825 63.158 0.00 0.00 0.00 4.57
63 64 3.050275 GAACCACGAGCCCAGCAC 61.050 66.667 0.00 0.00 0.00 4.40
64 65 4.680237 CGAACCACGAGCCCAGCA 62.680 66.667 0.00 0.00 45.77 4.41
65 66 4.681978 ACGAACCACGAGCCCAGC 62.682 66.667 0.00 0.00 45.77 4.85
66 67 2.738521 CACGAACCACGAGCCCAG 60.739 66.667 0.00 0.00 45.77 4.45
67 68 4.308458 CCACGAACCACGAGCCCA 62.308 66.667 0.00 0.00 45.77 5.36
68 69 3.310860 ATCCACGAACCACGAGCCC 62.311 63.158 0.00 0.00 45.77 5.19
69 70 2.100631 CATCCACGAACCACGAGCC 61.101 63.158 0.00 0.00 45.77 4.70
70 71 2.100631 CCATCCACGAACCACGAGC 61.101 63.158 0.00 0.00 45.77 5.03
71 72 2.100631 GCCATCCACGAACCACGAG 61.101 63.158 0.00 0.00 45.77 4.18
72 73 2.047655 GCCATCCACGAACCACGA 60.048 61.111 0.00 0.00 45.77 4.35
74 75 0.889186 ACTTGCCATCCACGAACCAC 60.889 55.000 0.00 0.00 0.00 4.16
75 76 0.179004 AACTTGCCATCCACGAACCA 60.179 50.000 0.00 0.00 0.00 3.67
76 77 0.958822 AAACTTGCCATCCACGAACC 59.041 50.000 0.00 0.00 0.00 3.62
77 78 2.223711 ACAAAACTTGCCATCCACGAAC 60.224 45.455 0.00 0.00 0.00 3.95
78 79 2.028130 ACAAAACTTGCCATCCACGAA 58.972 42.857 0.00 0.00 0.00 3.85
79 80 1.686355 ACAAAACTTGCCATCCACGA 58.314 45.000 0.00 0.00 0.00 4.35
80 81 2.507339 AACAAAACTTGCCATCCACG 57.493 45.000 0.00 0.00 0.00 4.94
81 82 4.441792 AGAAAACAAAACTTGCCATCCAC 58.558 39.130 0.00 0.00 0.00 4.02
82 83 4.442753 GGAGAAAACAAAACTTGCCATCCA 60.443 41.667 0.00 0.00 0.00 3.41
83 84 4.058124 GGAGAAAACAAAACTTGCCATCC 58.942 43.478 0.00 0.00 0.00 3.51
84 85 4.948847 AGGAGAAAACAAAACTTGCCATC 58.051 39.130 0.00 0.00 0.00 3.51
85 86 4.202253 GGAGGAGAAAACAAAACTTGCCAT 60.202 41.667 0.00 0.00 0.00 4.40
86 87 3.132111 GGAGGAGAAAACAAAACTTGCCA 59.868 43.478 0.00 0.00 0.00 4.92
87 88 3.717707 GGAGGAGAAAACAAAACTTGCC 58.282 45.455 0.00 0.00 0.00 4.52
88 89 3.066203 TCGGAGGAGAAAACAAAACTTGC 59.934 43.478 0.00 0.00 0.00 4.01
89 90 4.598062 GTCGGAGGAGAAAACAAAACTTG 58.402 43.478 0.00 0.00 0.00 3.16
90 91 3.311596 CGTCGGAGGAGAAAACAAAACTT 59.688 43.478 0.00 0.00 0.00 2.66
91 92 2.870411 CGTCGGAGGAGAAAACAAAACT 59.130 45.455 0.00 0.00 0.00 2.66
92 93 2.610833 ACGTCGGAGGAGAAAACAAAAC 59.389 45.455 4.48 0.00 0.00 2.43
93 94 2.867975 GACGTCGGAGGAGAAAACAAAA 59.132 45.455 0.00 0.00 0.00 2.44
94 95 2.101917 AGACGTCGGAGGAGAAAACAAA 59.898 45.455 10.46 0.00 0.00 2.83
95 96 1.684983 AGACGTCGGAGGAGAAAACAA 59.315 47.619 10.46 0.00 0.00 2.83
96 97 1.325355 AGACGTCGGAGGAGAAAACA 58.675 50.000 10.46 0.00 0.00 2.83
97 98 2.435533 AAGACGTCGGAGGAGAAAAC 57.564 50.000 10.46 0.00 0.00 2.43
98 99 3.152341 ACTAAGACGTCGGAGGAGAAAA 58.848 45.455 19.69 0.00 0.00 2.29
99 100 2.746362 GACTAAGACGTCGGAGGAGAAA 59.254 50.000 19.69 0.00 0.00 2.52
100 101 2.289882 TGACTAAGACGTCGGAGGAGAA 60.290 50.000 19.69 4.19 36.71 2.87
101 102 1.277273 TGACTAAGACGTCGGAGGAGA 59.723 52.381 19.69 4.77 36.71 3.71
102 103 1.735386 TGACTAAGACGTCGGAGGAG 58.265 55.000 19.69 12.18 36.71 3.69
103 104 2.014857 CATGACTAAGACGTCGGAGGA 58.985 52.381 19.69 9.40 36.71 3.71
104 105 1.743958 ACATGACTAAGACGTCGGAGG 59.256 52.381 19.69 10.70 36.71 4.30
105 106 2.418976 TCACATGACTAAGACGTCGGAG 59.581 50.000 10.46 13.56 36.71 4.63
106 107 2.418976 CTCACATGACTAAGACGTCGGA 59.581 50.000 10.46 0.70 36.71 4.55
107 108 2.478031 CCTCACATGACTAAGACGTCGG 60.478 54.545 10.46 7.26 36.71 4.79
108 109 2.478031 CCCTCACATGACTAAGACGTCG 60.478 54.545 10.46 0.00 36.71 5.12
109 110 2.492484 ACCCTCACATGACTAAGACGTC 59.508 50.000 7.70 7.70 34.52 4.34
110 111 2.231478 CACCCTCACATGACTAAGACGT 59.769 50.000 0.00 0.00 0.00 4.34
111 112 2.881074 CACCCTCACATGACTAAGACG 58.119 52.381 0.00 0.00 0.00 4.18
112 113 2.234908 AGCACCCTCACATGACTAAGAC 59.765 50.000 0.00 0.00 0.00 3.01
113 114 2.540383 AGCACCCTCACATGACTAAGA 58.460 47.619 0.00 0.00 0.00 2.10
114 115 3.701542 TCTAGCACCCTCACATGACTAAG 59.298 47.826 0.00 0.00 0.00 2.18
115 116 3.708451 TCTAGCACCCTCACATGACTAA 58.292 45.455 0.00 0.00 0.00 2.24
116 117 3.382083 TCTAGCACCCTCACATGACTA 57.618 47.619 0.00 0.00 0.00 2.59
117 118 2.238084 TCTAGCACCCTCACATGACT 57.762 50.000 0.00 0.00 0.00 3.41
118 119 2.697751 AGATCTAGCACCCTCACATGAC 59.302 50.000 0.00 0.00 0.00 3.06
119 120 2.697229 CAGATCTAGCACCCTCACATGA 59.303 50.000 0.00 0.00 0.00 3.07
120 121 2.697229 TCAGATCTAGCACCCTCACATG 59.303 50.000 0.00 0.00 0.00 3.21
121 122 3.037851 TCAGATCTAGCACCCTCACAT 57.962 47.619 0.00 0.00 0.00 3.21
122 123 2.532250 TCAGATCTAGCACCCTCACA 57.468 50.000 0.00 0.00 0.00 3.58
123 124 2.763448 ACTTCAGATCTAGCACCCTCAC 59.237 50.000 0.00 0.00 0.00 3.51
124 125 3.107402 ACTTCAGATCTAGCACCCTCA 57.893 47.619 0.00 0.00 0.00 3.86
125 126 4.081420 TCAAACTTCAGATCTAGCACCCTC 60.081 45.833 0.00 0.00 0.00 4.30
126 127 3.840666 TCAAACTTCAGATCTAGCACCCT 59.159 43.478 0.00 0.00 0.00 4.34
127 128 4.207891 TCAAACTTCAGATCTAGCACCC 57.792 45.455 0.00 0.00 0.00 4.61
128 129 4.574013 CCATCAAACTTCAGATCTAGCACC 59.426 45.833 0.00 0.00 0.00 5.01
129 130 4.034975 GCCATCAAACTTCAGATCTAGCAC 59.965 45.833 0.00 0.00 0.00 4.40
130 131 4.194640 GCCATCAAACTTCAGATCTAGCA 58.805 43.478 0.00 0.00 0.00 3.49
131 132 3.247173 CGCCATCAAACTTCAGATCTAGC 59.753 47.826 0.00 0.00 0.00 3.42
132 133 4.269603 CACGCCATCAAACTTCAGATCTAG 59.730 45.833 0.00 0.00 0.00 2.43
133 134 4.183865 CACGCCATCAAACTTCAGATCTA 58.816 43.478 0.00 0.00 0.00 1.98
134 135 3.005554 CACGCCATCAAACTTCAGATCT 58.994 45.455 0.00 0.00 0.00 2.75
135 136 2.744202 ACACGCCATCAAACTTCAGATC 59.256 45.455 0.00 0.00 0.00 2.75
136 137 2.744202 GACACGCCATCAAACTTCAGAT 59.256 45.455 0.00 0.00 0.00 2.90
137 138 2.143122 GACACGCCATCAAACTTCAGA 58.857 47.619 0.00 0.00 0.00 3.27
138 139 1.197721 GGACACGCCATCAAACTTCAG 59.802 52.381 0.00 0.00 36.34 3.02
139 140 1.234821 GGACACGCCATCAAACTTCA 58.765 50.000 0.00 0.00 36.34 3.02
140 141 0.165944 CGGACACGCCATCAAACTTC 59.834 55.000 0.00 0.00 35.94 3.01
141 142 1.234615 CCGGACACGCCATCAAACTT 61.235 55.000 0.00 0.00 39.22 2.66
142 143 1.671054 CCGGACACGCCATCAAACT 60.671 57.895 0.00 0.00 39.22 2.66
143 144 2.686816 CCCGGACACGCCATCAAAC 61.687 63.158 0.73 0.00 39.22 2.93
144 145 2.359354 CCCGGACACGCCATCAAA 60.359 61.111 0.73 0.00 39.22 2.69
145 146 4.402528 CCCCGGACACGCCATCAA 62.403 66.667 0.73 0.00 39.22 2.57
161 162 2.764637 AATCAGACCGGGGCAACACC 62.765 60.000 6.32 0.00 35.43 4.16
162 163 0.893727 AAATCAGACCGGGGCAACAC 60.894 55.000 6.32 0.00 39.74 3.32
163 164 0.893270 CAAATCAGACCGGGGCAACA 60.893 55.000 6.32 0.00 39.74 3.33
164 165 0.893727 ACAAATCAGACCGGGGCAAC 60.894 55.000 6.32 0.00 0.00 4.17
165 166 0.178975 AACAAATCAGACCGGGGCAA 60.179 50.000 6.32 0.00 0.00 4.52
166 167 0.608035 GAACAAATCAGACCGGGGCA 60.608 55.000 6.32 0.00 0.00 5.36
167 168 0.608035 TGAACAAATCAGACCGGGGC 60.608 55.000 6.32 0.00 33.04 5.80
168 169 1.539827 GTTGAACAAATCAGACCGGGG 59.460 52.381 6.32 0.00 39.77 5.73
169 170 1.196808 CGTTGAACAAATCAGACCGGG 59.803 52.381 6.32 0.00 39.77 5.73
170 171 1.196808 CCGTTGAACAAATCAGACCGG 59.803 52.381 0.00 0.00 39.77 5.28
171 172 1.871039 ACCGTTGAACAAATCAGACCG 59.129 47.619 0.00 0.00 39.77 4.79
172 173 5.390613 CATTACCGTTGAACAAATCAGACC 58.609 41.667 0.00 0.00 39.77 3.85
173 174 5.048991 ACCATTACCGTTGAACAAATCAGAC 60.049 40.000 0.00 0.00 39.77 3.51
174 175 5.067273 ACCATTACCGTTGAACAAATCAGA 58.933 37.500 0.00 0.00 39.77 3.27
175 176 5.371115 ACCATTACCGTTGAACAAATCAG 57.629 39.130 0.00 0.00 39.77 2.90
176 177 5.776173 AACCATTACCGTTGAACAAATCA 57.224 34.783 0.00 0.00 35.85 2.57
177 178 5.341196 CGAAACCATTACCGTTGAACAAATC 59.659 40.000 0.00 0.00 0.00 2.17
178 179 5.216648 CGAAACCATTACCGTTGAACAAAT 58.783 37.500 0.00 0.00 0.00 2.32
179 180 4.096081 ACGAAACCATTACCGTTGAACAAA 59.904 37.500 0.00 0.00 30.41 2.83
180 181 3.626670 ACGAAACCATTACCGTTGAACAA 59.373 39.130 0.00 0.00 30.41 2.83
181 182 3.204526 ACGAAACCATTACCGTTGAACA 58.795 40.909 0.00 0.00 30.41 3.18
182 183 3.883631 ACGAAACCATTACCGTTGAAC 57.116 42.857 0.00 0.00 30.41 3.18
183 184 4.897025 AAACGAAACCATTACCGTTGAA 57.103 36.364 0.00 0.00 43.28 2.69
184 185 4.897025 AAAACGAAACCATTACCGTTGA 57.103 36.364 0.00 0.00 43.28 3.18
185 186 5.115923 GCTAAAAACGAAACCATTACCGTTG 59.884 40.000 0.00 0.00 43.28 4.10
186 187 5.214417 GCTAAAAACGAAACCATTACCGTT 58.786 37.500 0.00 0.00 45.56 4.44
187 188 4.275443 TGCTAAAAACGAAACCATTACCGT 59.725 37.500 0.00 0.00 36.77 4.83
188 189 4.785417 TGCTAAAAACGAAACCATTACCG 58.215 39.130 0.00 0.00 0.00 4.02
189 190 5.118050 GCTTGCTAAAAACGAAACCATTACC 59.882 40.000 0.00 0.00 0.00 2.85
190 191 5.118050 GGCTTGCTAAAAACGAAACCATTAC 59.882 40.000 0.00 0.00 0.00 1.89
191 192 5.221263 TGGCTTGCTAAAAACGAAACCATTA 60.221 36.000 0.00 0.00 0.00 1.90
192 193 4.055360 GGCTTGCTAAAAACGAAACCATT 58.945 39.130 0.00 0.00 0.00 3.16
193 194 3.068873 TGGCTTGCTAAAAACGAAACCAT 59.931 39.130 0.00 0.00 0.00 3.55
194 195 2.427453 TGGCTTGCTAAAAACGAAACCA 59.573 40.909 0.00 0.00 0.00 3.67
195 196 2.792674 GTGGCTTGCTAAAAACGAAACC 59.207 45.455 0.00 0.00 0.00 3.27
196 197 2.792674 GGTGGCTTGCTAAAAACGAAAC 59.207 45.455 0.00 0.00 0.00 2.78
197 198 2.691011 AGGTGGCTTGCTAAAAACGAAA 59.309 40.909 0.00 0.00 0.00 3.46
198 199 2.034053 CAGGTGGCTTGCTAAAAACGAA 59.966 45.455 0.00 0.00 0.00 3.85
199 200 1.606668 CAGGTGGCTTGCTAAAAACGA 59.393 47.619 0.00 0.00 0.00 3.85
200 201 1.606668 TCAGGTGGCTTGCTAAAAACG 59.393 47.619 0.00 0.00 0.00 3.60
201 202 2.884639 TCTCAGGTGGCTTGCTAAAAAC 59.115 45.455 0.00 0.00 0.00 2.43
202 203 3.149196 CTCTCAGGTGGCTTGCTAAAAA 58.851 45.455 0.00 0.00 0.00 1.94
203 204 2.553028 CCTCTCAGGTGGCTTGCTAAAA 60.553 50.000 0.00 0.00 0.00 1.52
204 205 1.003580 CCTCTCAGGTGGCTTGCTAAA 59.996 52.381 0.00 0.00 0.00 1.85
205 206 0.615331 CCTCTCAGGTGGCTTGCTAA 59.385 55.000 0.00 0.00 0.00 3.09
206 207 2.290847 CCTCTCAGGTGGCTTGCTA 58.709 57.895 0.00 0.00 0.00 3.49
207 208 3.076092 CCTCTCAGGTGGCTTGCT 58.924 61.111 0.00 0.00 0.00 3.91
216 217 0.689623 AGCTTTGTGGACCTCTCAGG 59.310 55.000 0.00 0.00 42.49 3.86
217 218 1.805869 CAGCTTTGTGGACCTCTCAG 58.194 55.000 0.00 0.00 0.00 3.35
218 219 0.250467 GCAGCTTTGTGGACCTCTCA 60.250 55.000 0.00 0.00 0.00 3.27
219 220 0.250467 TGCAGCTTTGTGGACCTCTC 60.250 55.000 0.00 0.00 0.00 3.20
220 221 0.403271 ATGCAGCTTTGTGGACCTCT 59.597 50.000 0.00 0.00 0.00 3.69
221 222 2.113860 TATGCAGCTTTGTGGACCTC 57.886 50.000 0.00 0.00 0.00 3.85
222 223 2.025981 TGATATGCAGCTTTGTGGACCT 60.026 45.455 0.00 0.00 0.00 3.85
223 224 2.357009 CTGATATGCAGCTTTGTGGACC 59.643 50.000 0.00 0.00 37.90 4.46
224 225 3.687572 CTGATATGCAGCTTTGTGGAC 57.312 47.619 0.00 0.00 37.90 4.02
235 236 0.321034 GGCTCCATCGCTGATATGCA 60.321 55.000 0.00 0.00 0.00 3.96
236 237 1.357258 CGGCTCCATCGCTGATATGC 61.357 60.000 0.00 0.00 38.57 3.14
237 238 2.746997 CGGCTCCATCGCTGATATG 58.253 57.895 0.00 0.00 38.57 1.78
255 256 4.838486 CTCACCCGAGCTCGACGC 62.838 72.222 36.59 0.00 43.02 5.19
256 257 2.585170 CTTCTCACCCGAGCTCGACG 62.585 65.000 36.59 26.31 43.02 5.12
257 258 1.137825 CTTCTCACCCGAGCTCGAC 59.862 63.158 36.59 0.00 43.02 4.20
258 259 2.046864 CCTTCTCACCCGAGCTCGA 61.047 63.158 36.59 16.28 43.02 4.04
259 260 2.344203 ACCTTCTCACCCGAGCTCG 61.344 63.158 29.06 29.06 39.30 5.03
260 261 1.216710 CACCTTCTCACCCGAGCTC 59.783 63.158 2.73 2.73 39.30 4.09
261 262 0.616111 ATCACCTTCTCACCCGAGCT 60.616 55.000 0.00 0.00 39.30 4.09
262 263 0.179097 GATCACCTTCTCACCCGAGC 60.179 60.000 0.00 0.00 39.30 5.03
263 264 0.461961 GGATCACCTTCTCACCCGAG 59.538 60.000 0.00 0.00 40.98 4.63
264 265 1.320344 CGGATCACCTTCTCACCCGA 61.320 60.000 0.00 0.00 37.87 5.14
265 266 1.141881 CGGATCACCTTCTCACCCG 59.858 63.158 0.00 0.00 0.00 5.28
266 267 0.175989 GACGGATCACCTTCTCACCC 59.824 60.000 0.00 0.00 32.59 4.61
267 268 0.895530 TGACGGATCACCTTCTCACC 59.104 55.000 0.00 0.00 35.76 4.02
268 269 2.969628 ATGACGGATCACCTTCTCAC 57.030 50.000 0.00 0.00 37.79 3.51
269 270 3.981071 AAATGACGGATCACCTTCTCA 57.019 42.857 0.00 0.00 37.79 3.27
289 290 1.398692 AGCAGCCACCGAAAGAAAAA 58.601 45.000 0.00 0.00 0.00 1.94
290 291 2.264005 TAGCAGCCACCGAAAGAAAA 57.736 45.000 0.00 0.00 0.00 2.29
291 292 2.083774 CATAGCAGCCACCGAAAGAAA 58.916 47.619 0.00 0.00 0.00 2.52
292 293 1.277842 TCATAGCAGCCACCGAAAGAA 59.722 47.619 0.00 0.00 0.00 2.52
293 294 0.901827 TCATAGCAGCCACCGAAAGA 59.098 50.000 0.00 0.00 0.00 2.52
294 295 1.600957 CATCATAGCAGCCACCGAAAG 59.399 52.381 0.00 0.00 0.00 2.62
295 296 1.667236 CATCATAGCAGCCACCGAAA 58.333 50.000 0.00 0.00 0.00 3.46
296 297 0.179048 CCATCATAGCAGCCACCGAA 60.179 55.000 0.00 0.00 0.00 4.30
297 298 1.337384 ACCATCATAGCAGCCACCGA 61.337 55.000 0.00 0.00 0.00 4.69
298 299 0.392706 TACCATCATAGCAGCCACCG 59.607 55.000 0.00 0.00 0.00 4.94
299 300 1.543429 GGTACCATCATAGCAGCCACC 60.543 57.143 7.15 0.00 0.00 4.61
300 301 1.873903 CGGTACCATCATAGCAGCCAC 60.874 57.143 13.54 0.00 0.00 5.01
301 302 0.392706 CGGTACCATCATAGCAGCCA 59.607 55.000 13.54 0.00 0.00 4.75
302 303 0.320771 CCGGTACCATCATAGCAGCC 60.321 60.000 13.54 0.00 0.00 4.85
303 304 0.320771 CCCGGTACCATCATAGCAGC 60.321 60.000 13.54 0.00 0.00 5.25
304 305 0.321671 CCCCGGTACCATCATAGCAG 59.678 60.000 13.54 0.00 0.00 4.24
305 306 1.125093 CCCCCGGTACCATCATAGCA 61.125 60.000 13.54 0.00 0.00 3.49
306 307 1.677552 CCCCCGGTACCATCATAGC 59.322 63.158 13.54 0.00 0.00 2.97
307 308 1.125093 TGCCCCCGGTACCATCATAG 61.125 60.000 13.54 0.00 0.00 2.23
308 309 1.074395 TGCCCCCGGTACCATCATA 60.074 57.895 13.54 0.00 0.00 2.15
309 310 2.367648 TGCCCCCGGTACCATCAT 60.368 61.111 13.54 0.00 0.00 2.45
310 311 3.087253 CTGCCCCCGGTACCATCA 61.087 66.667 13.54 0.81 0.00 3.07
311 312 3.873812 CCTGCCCCCGGTACCATC 61.874 72.222 13.54 0.00 0.00 3.51
312 313 4.752594 ACCTGCCCCCGGTACCAT 62.753 66.667 13.54 0.00 31.69 3.55
315 316 4.404098 CACACCTGCCCCCGGTAC 62.404 72.222 0.00 0.00 32.37 3.34
320 321 4.660938 GACACCACACCTGCCCCC 62.661 72.222 0.00 0.00 0.00 5.40
321 322 3.429372 TTGACACCACACCTGCCCC 62.429 63.158 0.00 0.00 0.00 5.80
322 323 1.898574 CTTGACACCACACCTGCCC 60.899 63.158 0.00 0.00 0.00 5.36
323 324 2.555547 GCTTGACACCACACCTGCC 61.556 63.158 0.00 0.00 0.00 4.85
324 325 2.896801 CGCTTGACACCACACCTGC 61.897 63.158 0.00 0.00 0.00 4.85
325 326 2.896801 GCGCTTGACACCACACCTG 61.897 63.158 0.00 0.00 0.00 4.00
326 327 2.591715 GCGCTTGACACCACACCT 60.592 61.111 0.00 0.00 0.00 4.00
327 328 1.999071 TTTGCGCTTGACACCACACC 61.999 55.000 9.73 0.00 0.00 4.16
328 329 0.030638 ATTTGCGCTTGACACCACAC 59.969 50.000 9.73 0.00 0.00 3.82
329 330 1.265635 GTATTTGCGCTTGACACCACA 59.734 47.619 9.73 0.00 0.00 4.17
330 331 1.724654 CGTATTTGCGCTTGACACCAC 60.725 52.381 9.73 0.00 0.00 4.16
331 332 0.515127 CGTATTTGCGCTTGACACCA 59.485 50.000 9.73 0.00 0.00 4.17
332 333 0.515564 ACGTATTTGCGCTTGACACC 59.484 50.000 9.73 0.00 34.88 4.16
333 334 2.096417 AGAACGTATTTGCGCTTGACAC 60.096 45.455 9.73 0.00 34.88 3.67
334 335 2.096466 CAGAACGTATTTGCGCTTGACA 60.096 45.455 9.73 0.00 34.88 3.58
335 336 2.495939 CAGAACGTATTTGCGCTTGAC 58.504 47.619 9.73 0.21 34.88 3.18
336 337 1.136085 GCAGAACGTATTTGCGCTTGA 60.136 47.619 9.73 0.00 34.88 3.02
337 338 1.135972 AGCAGAACGTATTTGCGCTTG 60.136 47.619 9.73 0.00 42.47 4.01
338 339 1.156736 AGCAGAACGTATTTGCGCTT 58.843 45.000 9.73 0.00 42.47 4.68
339 340 2.004583 TAGCAGAACGTATTTGCGCT 57.995 45.000 9.73 6.63 42.47 5.92
340 341 2.540101 AGATAGCAGAACGTATTTGCGC 59.460 45.455 0.00 0.00 42.47 6.09
341 342 4.778842 AAGATAGCAGAACGTATTTGCG 57.221 40.909 11.59 0.00 42.47 4.85
342 343 6.542852 TGAAAAGATAGCAGAACGTATTTGC 58.457 36.000 9.95 9.95 38.09 3.68
343 344 7.743104 ACTGAAAAGATAGCAGAACGTATTTG 58.257 34.615 0.00 0.00 33.94 2.32
344 345 7.907214 ACTGAAAAGATAGCAGAACGTATTT 57.093 32.000 0.00 0.00 33.94 1.40
345 346 7.907214 AACTGAAAAGATAGCAGAACGTATT 57.093 32.000 0.00 0.00 33.94 1.89
346 347 7.907214 AAACTGAAAAGATAGCAGAACGTAT 57.093 32.000 0.00 0.00 33.94 3.06
347 348 7.724305 AAAACTGAAAAGATAGCAGAACGTA 57.276 32.000 0.00 0.00 33.94 3.57
348 349 6.619801 AAAACTGAAAAGATAGCAGAACGT 57.380 33.333 0.00 0.00 33.94 3.99
349 350 8.443160 TGATAAAACTGAAAAGATAGCAGAACG 58.557 33.333 0.00 0.00 33.94 3.95
352 353 9.453572 ACATGATAAAACTGAAAAGATAGCAGA 57.546 29.630 0.00 0.00 33.94 4.26
353 354 9.499585 CACATGATAAAACTGAAAAGATAGCAG 57.500 33.333 0.00 0.00 35.81 4.24
354 355 9.013229 ACACATGATAAAACTGAAAAGATAGCA 57.987 29.630 0.00 0.00 0.00 3.49
355 356 9.282247 CACACATGATAAAACTGAAAAGATAGC 57.718 33.333 0.00 0.00 0.00 2.97
358 359 9.071276 AGACACACATGATAAAACTGAAAAGAT 57.929 29.630 0.00 0.00 0.00 2.40
359 360 8.450578 AGACACACATGATAAAACTGAAAAGA 57.549 30.769 0.00 0.00 0.00 2.52
360 361 9.520204 AAAGACACACATGATAAAACTGAAAAG 57.480 29.630 0.00 0.00 0.00 2.27
364 365 9.283768 ACATAAAGACACACATGATAAAACTGA 57.716 29.630 0.00 0.00 0.00 3.41
365 366 9.333497 CACATAAAGACACACATGATAAAACTG 57.667 33.333 0.00 0.00 0.00 3.16
366 367 9.283768 TCACATAAAGACACACATGATAAAACT 57.716 29.630 0.00 0.00 0.00 2.66
367 368 9.891828 TTCACATAAAGACACACATGATAAAAC 57.108 29.630 0.00 0.00 0.00 2.43
443 444 1.406180 GGTGCACGGGTACAACTTTTT 59.594 47.619 11.45 0.00 0.00 1.94
444 445 1.026584 GGTGCACGGGTACAACTTTT 58.973 50.000 11.45 0.00 0.00 2.27
445 446 0.107116 TGGTGCACGGGTACAACTTT 60.107 50.000 11.45 0.00 0.00 2.66
446 447 0.107116 TTGGTGCACGGGTACAACTT 60.107 50.000 11.45 0.00 0.00 2.66
449 450 1.526455 GGTTGGTGCACGGGTACAA 60.526 57.895 11.45 6.06 0.00 2.41
455 456 3.959975 CCGTTGGTTGGTGCACGG 61.960 66.667 11.45 1.77 45.75 4.94
514 515 4.034510 GTGATTCGATGATTGGTTGAGGAC 59.965 45.833 0.00 0.00 0.00 3.85
517 518 3.940852 TGGTGATTCGATGATTGGTTGAG 59.059 43.478 0.00 0.00 0.00 3.02
522 524 2.642427 TGGTGGTGATTCGATGATTGG 58.358 47.619 0.00 0.00 0.00 3.16
565 570 0.599204 TGTTCCGTGGAAGCGAAGAC 60.599 55.000 0.53 0.00 34.49 3.01
580 585 4.029809 CGGGGTGGGGAGGTGTTC 62.030 72.222 0.00 0.00 0.00 3.18
593 598 4.065281 GGGGATCGCGTATCGGGG 62.065 72.222 5.77 0.00 40.17 5.73
645 650 1.332997 GATCGTCCTATATACCGGCCG 59.667 57.143 21.04 21.04 0.00 6.13
646 651 1.332997 CGATCGTCCTATATACCGGCC 59.667 57.143 7.03 0.00 0.00 6.13
679 687 0.033796 TAACGTGAGGGGAGGACGAT 60.034 55.000 0.00 0.00 36.90 3.73
688 696 0.248377 GGATCGACGTAACGTGAGGG 60.248 60.000 0.00 0.00 41.37 4.30
721 729 1.933853 CGGGATTAAAGAAGCGGTGAG 59.066 52.381 0.00 0.00 0.00 3.51
722 730 2.010043 GCGGGATTAAAGAAGCGGTGA 61.010 52.381 0.00 0.00 0.00 4.02
728 736 1.477014 GGGGAGGCGGGATTAAAGAAG 60.477 57.143 0.00 0.00 0.00 2.85
731 739 0.478507 ATGGGGAGGCGGGATTAAAG 59.521 55.000 0.00 0.00 0.00 1.85
743 751 2.863809 CGGGGATAAAGAAATGGGGAG 58.136 52.381 0.00 0.00 0.00 4.30
744 752 1.133606 GCGGGGATAAAGAAATGGGGA 60.134 52.381 0.00 0.00 0.00 4.81
763 771 4.241555 ATCCCCGATCTGCGTGGC 62.242 66.667 0.00 0.00 37.45 5.01
764 772 2.029666 GATCCCCGATCTGCGTGG 59.970 66.667 0.00 0.00 39.04 4.94
765 773 0.668706 GATGATCCCCGATCTGCGTG 60.669 60.000 3.49 0.00 39.56 5.34
766 774 1.115326 TGATGATCCCCGATCTGCGT 61.115 55.000 3.49 0.00 39.56 5.24
767 775 0.668706 GTGATGATCCCCGATCTGCG 60.669 60.000 3.49 0.00 39.56 5.18
768 776 0.321122 GGTGATGATCCCCGATCTGC 60.321 60.000 3.49 0.00 39.56 4.26
769 777 0.322975 GGGTGATGATCCCCGATCTG 59.677 60.000 3.69 0.00 39.56 2.90
770 778 2.765352 GGGTGATGATCCCCGATCT 58.235 57.895 3.69 0.00 39.56 2.75
785 793 1.341383 GCAGGTGAAGAATGATGGGGT 60.341 52.381 0.00 0.00 0.00 4.95
789 797 1.019673 CGGGCAGGTGAAGAATGATG 58.980 55.000 0.00 0.00 0.00 3.07
832 848 1.375396 CCATTCGCTGTGTCCCGAA 60.375 57.895 0.00 0.00 45.94 4.30
833 849 2.225791 CTCCATTCGCTGTGTCCCGA 62.226 60.000 0.00 0.00 0.00 5.14
834 850 1.811266 CTCCATTCGCTGTGTCCCG 60.811 63.158 0.00 0.00 0.00 5.14
881 900 2.544694 CGAGCTCAGGGCAGTATACAAG 60.545 54.545 15.40 0.00 44.79 3.16
882 901 1.409064 CGAGCTCAGGGCAGTATACAA 59.591 52.381 15.40 0.00 44.79 2.41
884 903 1.033574 ACGAGCTCAGGGCAGTATAC 58.966 55.000 15.40 0.00 44.79 1.47
891 910 4.874977 GCCGTACGAGCTCAGGGC 62.875 72.222 18.76 18.56 38.41 5.19
893 912 2.202623 GTGCCGTACGAGCTCAGG 60.203 66.667 18.76 11.88 0.00 3.86
908 927 3.550431 ATCCAGCGATCCCCCGTG 61.550 66.667 0.00 0.00 0.00 4.94
944 963 4.508128 CATGGACGGACGGACGGG 62.508 72.222 6.00 0.00 38.39 5.28
1009 1034 1.453015 TCCAGCAACACGGCAACTT 60.453 52.632 0.00 0.00 35.83 2.66
1052 1077 1.308069 CGTCTCCATTGGTGGCTTGG 61.308 60.000 7.68 0.00 45.63 3.61
1055 1080 2.045926 GCGTCTCCATTGGTGGCT 60.046 61.111 7.68 0.00 45.63 4.75
1075 1100 3.766691 ACCGCCATTACGCTCCGT 61.767 61.111 0.00 0.00 44.35 4.69
1116 1141 1.067582 GTAAGGGCCGTCCATCTCG 59.932 63.158 0.00 0.00 38.24 4.04
1232 1257 2.197605 TGCCACGAGGAGACGTTGA 61.198 57.895 1.86 0.00 44.76 3.18
1240 1265 2.997315 CCTGAGGTGCCACGAGGA 60.997 66.667 1.86 0.00 36.89 3.71
1269 1294 4.467084 CCCATGACCCCGACCACG 62.467 72.222 0.00 0.00 39.43 4.94
1388 1413 2.947938 ATTTGATGGGAGGCGGCGAG 62.948 60.000 12.98 0.00 0.00 5.03
1389 1414 2.550699 AATTTGATGGGAGGCGGCGA 62.551 55.000 12.98 0.00 0.00 5.54
1390 1415 2.063541 GAATTTGATGGGAGGCGGCG 62.064 60.000 0.51 0.51 0.00 6.46
1400 1428 7.285783 ACATGCGATTTTTCTGAATTTGATG 57.714 32.000 0.00 0.00 0.00 3.07
1445 1483 2.592861 GATCAGTGATGGCCGGGC 60.593 66.667 23.42 23.42 0.00 6.13
1446 1484 2.111878 GGATCAGTGATGGCCGGG 59.888 66.667 11.20 0.00 0.00 5.73
1448 1486 0.758734 TAAGGGATCAGTGATGGCCG 59.241 55.000 11.20 0.00 0.00 6.13
1449 1487 2.173569 ACTTAAGGGATCAGTGATGGCC 59.826 50.000 11.20 6.32 0.00 5.36
1450 1488 3.567478 ACTTAAGGGATCAGTGATGGC 57.433 47.619 11.20 0.00 0.00 4.40
1451 1489 6.183347 AGAAAACTTAAGGGATCAGTGATGG 58.817 40.000 11.20 0.00 0.00 3.51
1452 1490 7.609532 AGAAGAAAACTTAAGGGATCAGTGATG 59.390 37.037 11.20 0.00 0.00 3.07
1453 1491 7.694093 AGAAGAAAACTTAAGGGATCAGTGAT 58.306 34.615 4.98 4.98 0.00 3.06
1454 1492 7.016661 AGAGAAGAAAACTTAAGGGATCAGTGA 59.983 37.037 7.53 0.00 0.00 3.41
1456 1494 7.323052 AGAGAAGAAAACTTAAGGGATCAGT 57.677 36.000 7.53 0.00 0.00 3.41
1459 1497 7.170151 GCGATAGAGAAGAAAACTTAAGGGATC 59.830 40.741 7.53 1.74 39.76 3.36
1460 1498 6.987404 GCGATAGAGAAGAAAACTTAAGGGAT 59.013 38.462 7.53 0.00 39.76 3.85
1461 1499 6.338937 GCGATAGAGAAGAAAACTTAAGGGA 58.661 40.000 7.53 0.00 39.76 4.20
1462 1500 5.232414 CGCGATAGAGAAGAAAACTTAAGGG 59.768 44.000 0.00 0.00 38.63 3.95
1463 1501 5.805994 ACGCGATAGAGAAGAAAACTTAAGG 59.194 40.000 15.93 0.00 40.06 2.69
1464 1502 6.748198 AGACGCGATAGAGAAGAAAACTTAAG 59.252 38.462 15.93 0.00 40.06 1.85
1465 1503 6.527023 CAGACGCGATAGAGAAGAAAACTTAA 59.473 38.462 15.93 0.00 40.06 1.85
1466 1504 6.028368 CAGACGCGATAGAGAAGAAAACTTA 58.972 40.000 15.93 0.00 40.06 2.24
1467 1505 4.859798 CAGACGCGATAGAGAAGAAAACTT 59.140 41.667 15.93 0.00 40.06 2.66
1468 1506 4.156190 TCAGACGCGATAGAGAAGAAAACT 59.844 41.667 15.93 0.00 40.06 2.66
1477 1515 7.148885 GGAAGATTAAATTCAGACGCGATAGAG 60.149 40.741 15.93 0.00 43.65 2.43
1520 1558 1.135373 ACCAGATGAACGAGTACAGCG 60.135 52.381 6.61 6.61 0.00 5.18
1526 1564 2.796557 TCTGAGACCAGATGAACGAGT 58.203 47.619 0.00 0.00 44.01 4.18
1536 1577 2.469274 ATGTTGCAGTCTGAGACCAG 57.531 50.000 9.33 3.56 41.74 4.00
1537 1578 2.936919 AATGTTGCAGTCTGAGACCA 57.063 45.000 9.33 0.00 32.18 4.02
1538 1579 5.689383 TTAAAATGTTGCAGTCTGAGACC 57.311 39.130 9.33 0.00 32.18 3.85
1542 1583 9.598517 AGAAAATTTTAAAATGTTGCAGTCTGA 57.401 25.926 18.95 0.00 0.00 3.27
1550 1595 6.574462 CAGGCGCAGAAAATTTTAAAATGTTG 59.426 34.615 18.95 9.17 0.00 3.33
1562 1607 2.079925 GAGAGAACAGGCGCAGAAAAT 58.920 47.619 10.83 0.00 0.00 1.82
1565 1610 1.080501 CGAGAGAACAGGCGCAGAA 60.081 57.895 10.83 0.00 0.00 3.02
1567 1612 2.091112 CACGAGAGAACAGGCGCAG 61.091 63.158 10.83 3.04 0.00 5.18
1568 1613 1.877576 ATCACGAGAGAACAGGCGCA 61.878 55.000 10.83 0.00 0.00 6.09
1569 1614 0.100682 TATCACGAGAGAACAGGCGC 59.899 55.000 0.00 0.00 0.00 6.53
1571 1616 5.112686 AGATTTTATCACGAGAGAACAGGC 58.887 41.667 0.00 0.00 0.00 4.85
1572 1617 6.568869 AGAGATTTTATCACGAGAGAACAGG 58.431 40.000 0.00 0.00 0.00 4.00
1573 1618 6.413526 CGAGAGATTTTATCACGAGAGAACAG 59.586 42.308 0.00 0.00 0.00 3.16
1575 1620 6.412653 GTCGAGAGATTTTATCACGAGAGAAC 59.587 42.308 0.00 0.00 45.19 3.01
1576 1621 6.458478 GGTCGAGAGATTTTATCACGAGAGAA 60.458 42.308 0.00 0.00 45.19 2.87
1577 1622 5.007823 GGTCGAGAGATTTTATCACGAGAGA 59.992 44.000 0.00 0.00 45.19 3.10
1578 1623 5.008217 AGGTCGAGAGATTTTATCACGAGAG 59.992 44.000 0.00 0.00 45.19 3.20
1579 1624 4.882427 AGGTCGAGAGATTTTATCACGAGA 59.118 41.667 0.00 0.00 45.19 4.04
1580 1625 4.973051 CAGGTCGAGAGATTTTATCACGAG 59.027 45.833 0.00 0.00 45.19 4.18
1581 1626 4.638865 TCAGGTCGAGAGATTTTATCACGA 59.361 41.667 0.00 0.00 45.19 4.35
1582 1627 4.921547 TCAGGTCGAGAGATTTTATCACG 58.078 43.478 0.00 0.00 45.19 4.35
1583 1628 6.507900 TCATCAGGTCGAGAGATTTTATCAC 58.492 40.000 0.00 0.00 45.19 3.06
1584 1629 6.715347 TCATCAGGTCGAGAGATTTTATCA 57.285 37.500 0.00 0.00 45.19 2.15
1585 1630 7.869937 TGATTCATCAGGTCGAGAGATTTTATC 59.130 37.037 0.00 0.00 35.79 1.75
1586 1631 7.730084 TGATTCATCAGGTCGAGAGATTTTAT 58.270 34.615 0.00 0.00 35.79 1.40
1587 1632 7.112452 TGATTCATCAGGTCGAGAGATTTTA 57.888 36.000 0.00 0.00 35.79 1.52
1588 1633 5.982356 TGATTCATCAGGTCGAGAGATTTT 58.018 37.500 0.00 0.00 35.79 1.82
1589 1634 5.604758 TGATTCATCAGGTCGAGAGATTT 57.395 39.130 0.00 0.00 35.79 2.17
1590 1635 5.604758 TTGATTCATCAGGTCGAGAGATT 57.395 39.130 0.00 0.00 39.44 2.40
1591 1636 5.804944 ATTGATTCATCAGGTCGAGAGAT 57.195 39.130 0.00 0.00 39.44 2.75
1611 1656 5.319453 TGAGCTCCTTCATTCACAGAAATT 58.681 37.500 12.15 0.00 0.00 1.82
1639 1684 3.499918 ACTGCTCCTTCTTGACGAAATTG 59.500 43.478 0.00 0.00 0.00 2.32
1650 1695 0.896923 CTGCTCTGACTGCTCCTTCT 59.103 55.000 0.00 0.00 0.00 2.85
1663 1708 6.260493 GAAGTCTTTCATGCATTATCTGCTCT 59.740 38.462 0.00 0.00 41.11 4.09
1712 1757 0.482446 TGGCAGGATCAAACCTTGGT 59.518 50.000 0.00 0.00 38.32 3.67
1725 1770 1.242076 GTAATGGCTATGCTGGCAGG 58.758 55.000 17.64 0.00 45.49 4.85
1727 1772 0.550432 TGGTAATGGCTATGCTGGCA 59.450 50.000 0.00 0.00 46.31 4.92
1729 1774 2.645838 AGTGGTAATGGCTATGCTGG 57.354 50.000 0.00 0.00 0.00 4.85
1732 1777 5.855045 AGTAACTAGTGGTAATGGCTATGC 58.145 41.667 0.00 0.00 0.00 3.14
1781 1826 8.494347 GCAGCATCAGTAAAAGTGAAGATATAG 58.506 37.037 0.00 0.00 30.32 1.31
1790 1835 4.494350 AAGTGCAGCATCAGTAAAAGTG 57.506 40.909 0.00 0.00 0.00 3.16
1810 1860 0.827507 GCACTGGCAGGAAGGGAAAA 60.828 55.000 20.34 0.00 40.72 2.29
1844 1894 5.452078 TCCCATAATGCGAAATTTCCATC 57.548 39.130 17.22 7.41 0.00 3.51
1845 1895 4.281688 CCTCCCATAATGCGAAATTTCCAT 59.718 41.667 12.54 13.00 0.00 3.41
1945 1995 6.913170 ACTGACAGTAACTATTTGCATTTGG 58.087 36.000 6.24 0.00 0.00 3.28
1949 1999 8.848474 AAAGTACTGACAGTAACTATTTGCAT 57.152 30.769 16.84 0.00 31.62 3.96
1994 2044 7.719193 TCTGAGATTAACCAAATTCAGTGTCAA 59.281 33.333 0.00 0.00 35.91 3.18
2012 2062 0.665835 CGTCGCTAGGCTCTGAGATT 59.334 55.000 9.28 0.00 0.00 2.40
2030 2080 5.550232 TCAGAATGAATCCATTGTTGTCG 57.450 39.130 0.00 0.00 45.97 4.35
2042 2092 6.493446 CCGTTTGCGCTGATCAGAATGAAT 62.493 45.833 27.04 0.00 42.89 2.57
2105 2155 6.114767 TGAATCGATCTTGTGATGATCCAAA 58.885 36.000 0.00 0.00 37.59 3.28
2113 2163 7.621428 ATCAAAACTGAATCGATCTTGTGAT 57.379 32.000 0.00 2.12 35.26 3.06
2125 2175 9.975218 AGGTACCAAATAGTATCAAAACTGAAT 57.025 29.630 15.94 0.00 0.00 2.57
2145 2196 3.509740 GAGTGAAGCTCGTTTAGGTACC 58.490 50.000 2.73 2.73 33.87 3.34
2164 2215 0.397941 TTGCACACCTGGAGGAAGAG 59.602 55.000 0.00 0.00 38.94 2.85
2168 2219 1.303561 GCATTGCACACCTGGAGGA 60.304 57.895 3.15 0.00 38.94 3.71
2217 2268 2.692273 GAAACCGGGGCAGAACCAGT 62.692 60.000 6.32 0.00 42.05 4.00
2220 2271 1.228459 AAGAAACCGGGGCAGAACC 60.228 57.895 6.32 0.00 37.93 3.62
2306 2357 8.460428 CGGAGAGAAAAATGAGTAACTACTACT 58.540 37.037 0.00 0.00 43.95 2.57
2326 2383 3.570125 TGAATGGCTACTATGTCGGAGAG 59.430 47.826 0.00 0.00 36.95 3.20
2327 2384 3.562182 TGAATGGCTACTATGTCGGAGA 58.438 45.455 0.00 0.00 0.00 3.71
2328 2385 4.021981 TGATGAATGGCTACTATGTCGGAG 60.022 45.833 0.00 0.00 0.00 4.63
2329 2386 3.895041 TGATGAATGGCTACTATGTCGGA 59.105 43.478 0.00 0.00 0.00 4.55
2331 2388 6.791887 ATTTGATGAATGGCTACTATGTCG 57.208 37.500 0.00 0.00 0.00 4.35
2332 2389 7.934457 ACAATTTGATGAATGGCTACTATGTC 58.066 34.615 2.79 0.00 0.00 3.06
2333 2390 7.886629 ACAATTTGATGAATGGCTACTATGT 57.113 32.000 2.79 0.00 0.00 2.29
2334 2391 9.276590 TCTACAATTTGATGAATGGCTACTATG 57.723 33.333 2.79 0.00 0.00 2.23
2335 2392 9.499479 CTCTACAATTTGATGAATGGCTACTAT 57.501 33.333 2.79 0.00 0.00 2.12
2342 2399 9.778993 CAGTTAACTCTACAATTTGATGAATGG 57.221 33.333 4.77 0.00 0.00 3.16
2516 2573 2.711009 ACTTTCAGGACATGGTTCAGGA 59.289 45.455 0.00 0.00 0.00 3.86
2561 2619 2.222027 CGGGTGAGATGAATAAAGGGC 58.778 52.381 0.00 0.00 0.00 5.19
2579 2637 2.124570 CTGTGATCAAGGGGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
2597 2655 2.257034 GGAGATGTCGTTGTCGGTAAC 58.743 52.381 0.00 0.00 37.69 2.50
2599 2657 1.536940 TGGAGATGTCGTTGTCGGTA 58.463 50.000 0.00 0.00 37.69 4.02
2605 2663 1.734465 GCCTCTTTGGAGATGTCGTTG 59.266 52.381 0.00 0.00 41.86 4.10
2660 2718 7.555087 TGAACAACACCATTTTTCTGAAGAAT 58.445 30.769 0.69 0.69 33.54 2.40
2701 2759 1.375013 GTCGAAGCCAAGCCGGTTA 60.375 57.895 1.90 0.00 36.97 2.85
2710 2768 4.373116 GGCACCGAGTCGAAGCCA 62.373 66.667 30.63 0.00 42.69 4.75
2797 2859 1.966451 GTTGAAGGAGGTGGTGCGG 60.966 63.158 0.00 0.00 0.00 5.69
2798 2860 1.227823 TGTTGAAGGAGGTGGTGCG 60.228 57.895 0.00 0.00 0.00 5.34
2837 2899 1.106944 AACAGGGGCGTGTTTCTTGG 61.107 55.000 0.00 0.00 37.36 3.61
2851 2913 1.742761 ACATCCGATGAGCAAACAGG 58.257 50.000 15.47 0.00 0.00 4.00
2859 2921 1.268896 GCCATGCAAACATCCGATGAG 60.269 52.381 15.47 5.76 32.87 2.90
2865 2927 1.081094 GCAAAGCCATGCAAACATCC 58.919 50.000 6.46 0.00 45.70 3.51
2874 2936 1.511305 CAGCCTCTGCAAAGCCATG 59.489 57.895 0.00 0.00 41.13 3.66
2875 2937 4.013702 CAGCCTCTGCAAAGCCAT 57.986 55.556 0.00 0.00 41.13 4.40
3094 3159 1.135915 CATGTCCTCCTCGAACCTCAG 59.864 57.143 0.00 0.00 0.00 3.35
3150 3215 1.457455 CAGCTCCCTCCTCTCCTCC 60.457 68.421 0.00 0.00 0.00 4.30
3264 3345 6.014242 TGTCAGTAACCAATCAGTGAAGATCT 60.014 38.462 0.00 0.00 0.00 2.75
3278 3359 4.155826 GCAGCAACATAATGTCAGTAACCA 59.844 41.667 0.00 0.00 0.00 3.67
3279 3360 4.662145 GCAGCAACATAATGTCAGTAACC 58.338 43.478 0.00 0.00 0.00 2.85
3280 3361 4.334443 CGCAGCAACATAATGTCAGTAAC 58.666 43.478 0.00 0.00 0.00 2.50
3282 3363 2.935849 CCGCAGCAACATAATGTCAGTA 59.064 45.455 0.00 0.00 0.00 2.74
3283 3364 1.739466 CCGCAGCAACATAATGTCAGT 59.261 47.619 0.00 0.00 0.00 3.41
3377 3486 3.468326 GATGAGCCCGGCTTCCTCC 62.468 68.421 14.70 0.10 39.88 4.30
3586 3695 2.034179 TCAGAAACTGTCGCGAGAAGAA 59.966 45.455 22.00 1.11 45.01 2.52
3620 3861 2.911484 CGTCGGTCGACAGGGTTGA 61.911 63.158 18.91 1.98 44.77 3.18
3621 3862 2.430244 CGTCGGTCGACAGGGTTG 60.430 66.667 18.91 0.72 44.77 3.77
3625 3866 2.033755 AGACTCGTCGGTCGACAGG 61.034 63.158 18.91 8.75 44.77 4.00
3641 3882 2.234143 CCAGTCAGTCAGTCAGTCAGA 58.766 52.381 0.00 0.00 0.00 3.27
3643 3884 0.676184 GCCAGTCAGTCAGTCAGTCA 59.324 55.000 0.00 0.00 0.00 3.41
3644 3885 0.037790 GGCCAGTCAGTCAGTCAGTC 60.038 60.000 0.00 0.00 0.00 3.51
3873 4114 3.813724 CCATGGCCCTCACCCTCC 61.814 72.222 0.00 0.00 0.00 4.30
3884 4125 0.036765 TTGTACTCGTCCACCATGGC 60.037 55.000 13.04 0.00 37.47 4.40
3987 4228 4.999950 AGAAAATTCAGAAGTCGATGCTGT 59.000 37.500 10.56 0.00 0.00 4.40
4041 4286 7.062371 CACAAAAGAACGAAACAAATAACCACA 59.938 33.333 0.00 0.00 0.00 4.17
4042 4287 7.387945 CACAAAAGAACGAAACAAATAACCAC 58.612 34.615 0.00 0.00 0.00 4.16
4043 4288 6.035112 GCACAAAAGAACGAAACAAATAACCA 59.965 34.615 0.00 0.00 0.00 3.67
4045 4290 6.983910 TGCACAAAAGAACGAAACAAATAAC 58.016 32.000 0.00 0.00 0.00 1.89
4046 4291 7.763172 ATGCACAAAAGAACGAAACAAATAA 57.237 28.000 0.00 0.00 0.00 1.40
4086 4353 8.325046 GCCATGTCCCTAGAGATATAGAAAAAT 58.675 37.037 0.00 0.00 0.00 1.82
4087 4354 7.292356 TGCCATGTCCCTAGAGATATAGAAAAA 59.708 37.037 0.00 0.00 0.00 1.94
4088 4355 6.787458 TGCCATGTCCCTAGAGATATAGAAAA 59.213 38.462 0.00 0.00 0.00 2.29
4089 4356 6.322931 TGCCATGTCCCTAGAGATATAGAAA 58.677 40.000 0.00 0.00 0.00 2.52
4090 4357 5.903923 TGCCATGTCCCTAGAGATATAGAA 58.096 41.667 0.00 0.00 0.00 2.10
4091 4358 5.514169 CTGCCATGTCCCTAGAGATATAGA 58.486 45.833 0.00 0.00 0.00 1.98
4092 4359 4.648762 CCTGCCATGTCCCTAGAGATATAG 59.351 50.000 0.00 0.00 0.00 1.31
4093 4360 4.045974 ACCTGCCATGTCCCTAGAGATATA 59.954 45.833 0.00 0.00 0.00 0.86
4094 4361 3.181402 ACCTGCCATGTCCCTAGAGATAT 60.181 47.826 0.00 0.00 0.00 1.63
4095 4362 2.180086 ACCTGCCATGTCCCTAGAGATA 59.820 50.000 0.00 0.00 0.00 1.98
4096 4363 1.061812 ACCTGCCATGTCCCTAGAGAT 60.062 52.381 0.00 0.00 0.00 2.75
4097 4364 0.339859 ACCTGCCATGTCCCTAGAGA 59.660 55.000 0.00 0.00 0.00 3.10
4098 4365 1.139853 GAACCTGCCATGTCCCTAGAG 59.860 57.143 0.00 0.00 0.00 2.43
4099 4366 1.204146 GAACCTGCCATGTCCCTAGA 58.796 55.000 0.00 0.00 0.00 2.43
4100 4367 0.911769 TGAACCTGCCATGTCCCTAG 59.088 55.000 0.00 0.00 0.00 3.02
4101 4368 0.911769 CTGAACCTGCCATGTCCCTA 59.088 55.000 0.00 0.00 0.00 3.53
4102 4369 1.136329 ACTGAACCTGCCATGTCCCT 61.136 55.000 0.00 0.00 0.00 4.20
4103 4370 0.251341 AACTGAACCTGCCATGTCCC 60.251 55.000 0.00 0.00 0.00 4.46
4104 4371 0.883833 CAACTGAACCTGCCATGTCC 59.116 55.000 0.00 0.00 0.00 4.02
4105 4372 1.808945 CTCAACTGAACCTGCCATGTC 59.191 52.381 0.00 0.00 0.00 3.06
4206 4473 1.195115 TCCGAACAGGCTCTAAGCAT 58.805 50.000 0.86 0.00 44.75 3.79
4207 4474 1.134699 CATCCGAACAGGCTCTAAGCA 60.135 52.381 0.86 0.00 44.75 3.91
4208 4475 1.576356 CATCCGAACAGGCTCTAAGC 58.424 55.000 0.00 0.00 41.46 3.09
4209 4476 1.134699 TGCATCCGAACAGGCTCTAAG 60.135 52.381 0.00 0.00 40.77 2.18
4210 4477 0.901827 TGCATCCGAACAGGCTCTAA 59.098 50.000 0.00 0.00 40.77 2.10
4211 4478 0.175760 GTGCATCCGAACAGGCTCTA 59.824 55.000 0.00 0.00 40.77 2.43
4237 4504 4.505742 GGAGTGGAGTGGAAGATTTGAAGT 60.506 45.833 0.00 0.00 0.00 3.01
4435 4723 3.329542 GAGCTCCAATGGGTCCGCA 62.330 63.158 0.87 0.00 34.93 5.69
4726 5014 3.599285 GACGTGGATGCGGTTCCCA 62.599 63.158 0.00 0.00 34.67 4.37
4961 5255 3.194861 TCGCCAGATCGATCGAAATTTT 58.805 40.909 23.50 4.62 33.02 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.