Multiple sequence alignment - TraesCS7A01G352200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G352200 chr7A 100.000 3464 0 0 1 3464 515881713 515878250 0.000000e+00 6397
1 TraesCS7A01G352200 chr7B 93.312 2811 151 13 662 3461 504962025 504964809 0.000000e+00 4115
2 TraesCS7A01G352200 chr7B 86.813 182 23 1 450 630 504961137 504961318 5.860000e-48 202
3 TraesCS7A01G352200 chr7B 80.220 182 30 6 265 444 678899905 678899728 7.800000e-27 132
4 TraesCS7A01G352200 chr7D 92.455 2823 167 26 662 3462 479287555 479290353 0.000000e+00 3991
5 TraesCS7A01G352200 chr7D 88.415 164 17 2 450 612 479285618 479285780 2.730000e-46 196
6 TraesCS7A01G352200 chr1B 93.377 151 10 0 4 154 306785198 306785348 1.250000e-54 224
7 TraesCS7A01G352200 chr1B 92.053 151 12 0 4 154 306567037 306567187 2.710000e-51 213
8 TraesCS7A01G352200 chr1B 78.182 275 45 11 343 607 578050577 578050308 9.950000e-36 161
9 TraesCS7A01G352200 chr1B 81.319 182 28 6 265 444 338042834 338043011 3.600000e-30 143
10 TraesCS7A01G352200 chr6B 92.157 153 11 1 1 153 134641085 134641236 7.530000e-52 215
11 TraesCS7A01G352200 chr6B 91.447 152 13 0 2 153 520992217 520992066 3.500000e-50 209
12 TraesCS7A01G352200 chr6B 79.348 276 43 10 343 609 643427767 643428037 7.640000e-42 182
13 TraesCS7A01G352200 chr6D 92.617 149 10 1 5 153 441819566 441819419 2.710000e-51 213
14 TraesCS7A01G352200 chr3B 91.558 154 13 0 1 154 121636362 121636515 2.710000e-51 213
15 TraesCS7A01G352200 chr2A 91.558 154 13 0 1 154 669968160 669968313 2.710000e-51 213
16 TraesCS7A01G352200 chr2A 77.778 270 49 9 343 605 772430433 772430168 4.630000e-34 156
17 TraesCS7A01G352200 chr4D 91.503 153 13 0 1 153 479356893 479357045 9.740000e-51 211
18 TraesCS7A01G352200 chr4D 88.957 163 17 1 2 163 342606262 342606424 2.110000e-47 200
19 TraesCS7A01G352200 chr1A 77.818 275 45 11 343 607 579961338 579961070 4.630000e-34 156
20 TraesCS7A01G352200 chr5B 81.215 181 30 4 265 444 676335727 676335904 3.600000e-30 143
21 TraesCS7A01G352200 chr6A 80.769 182 29 6 265 444 586295368 586295545 1.680000e-28 137
22 TraesCS7A01G352200 chr3A 80.769 182 29 6 265 444 699111613 699111790 1.680000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G352200 chr7A 515878250 515881713 3463 True 6397.0 6397 100.0000 1 3464 1 chr7A.!!$R1 3463
1 TraesCS7A01G352200 chr7B 504961137 504964809 3672 False 2158.5 4115 90.0625 450 3461 2 chr7B.!!$F1 3011
2 TraesCS7A01G352200 chr7D 479285618 479290353 4735 False 2093.5 3991 90.4350 450 3462 2 chr7D.!!$F1 3012

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 328 0.030705 TTCCTCTCCTATGGCTGCCT 60.031 55.0 21.03 8.02 0.0 4.75 F
328 329 0.030705 TCCTCTCCTATGGCTGCCTT 60.031 55.0 21.03 16.33 0.0 4.35 F
389 390 0.107897 TATGACGGTGCATCGCCTTT 60.108 50.0 21.49 0.00 0.0 3.11 F
429 430 0.690192 TGGCCTTCTTCGACAATGGA 59.310 50.0 3.32 0.00 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2182 3936 0.463620 GCGATCTCCTCCAGCTTCTT 59.536 55.000 0.0 0.00 0.00 2.52 R
2183 3937 1.398958 GGCGATCTCCTCCAGCTTCT 61.399 60.000 0.0 0.00 0.00 2.85 R
2331 4085 1.678728 CCGGCTTTCTTGCATACCTGA 60.679 52.381 0.0 0.00 34.04 3.86 R
2550 4310 4.750098 CACCACTAACACTGTTTAGTCCTG 59.250 45.833 0.0 6.94 39.77 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.866883 AAAACAACAACTGACACTGGG 57.133 42.857 0.00 0.00 0.00 4.45
26 27 1.102978 AACAACAACTGACACTGGGC 58.897 50.000 0.00 0.00 0.00 5.36
27 28 0.034574 ACAACAACTGACACTGGGCA 60.035 50.000 0.00 0.00 0.00 5.36
28 29 0.381801 CAACAACTGACACTGGGCAC 59.618 55.000 0.00 0.00 0.00 5.01
29 30 0.255890 AACAACTGACACTGGGCACT 59.744 50.000 0.00 0.00 0.00 4.40
30 31 1.128200 ACAACTGACACTGGGCACTA 58.872 50.000 0.00 0.00 0.00 2.74
31 32 1.488812 ACAACTGACACTGGGCACTAA 59.511 47.619 0.00 0.00 0.00 2.24
32 33 2.146342 CAACTGACACTGGGCACTAAG 58.854 52.381 0.00 0.00 0.00 2.18
33 34 1.424638 ACTGACACTGGGCACTAAGT 58.575 50.000 0.00 0.00 0.00 2.24
34 35 1.768870 ACTGACACTGGGCACTAAGTT 59.231 47.619 0.00 0.00 0.00 2.66
35 36 2.969950 ACTGACACTGGGCACTAAGTTA 59.030 45.455 0.00 0.00 0.00 2.24
36 37 3.389983 ACTGACACTGGGCACTAAGTTAA 59.610 43.478 0.00 0.00 0.00 2.01
37 38 4.041691 ACTGACACTGGGCACTAAGTTAAT 59.958 41.667 0.00 0.00 0.00 1.40
38 39 5.247564 ACTGACACTGGGCACTAAGTTAATA 59.752 40.000 0.00 0.00 0.00 0.98
39 40 5.730550 TGACACTGGGCACTAAGTTAATAG 58.269 41.667 0.00 0.00 0.00 1.73
40 41 5.099042 ACACTGGGCACTAAGTTAATAGG 57.901 43.478 0.00 0.00 0.00 2.57
41 42 4.534897 ACACTGGGCACTAAGTTAATAGGT 59.465 41.667 0.00 0.00 0.00 3.08
42 43 5.013808 ACACTGGGCACTAAGTTAATAGGTT 59.986 40.000 0.00 0.00 0.00 3.50
43 44 6.214005 ACACTGGGCACTAAGTTAATAGGTTA 59.786 38.462 0.00 0.00 0.00 2.85
44 45 6.761714 CACTGGGCACTAAGTTAATAGGTTAG 59.238 42.308 0.00 0.00 0.00 2.34
45 46 6.442885 ACTGGGCACTAAGTTAATAGGTTAGT 59.557 38.462 0.00 0.00 37.46 2.24
46 47 6.881570 TGGGCACTAAGTTAATAGGTTAGTC 58.118 40.000 0.00 0.00 35.30 2.59
47 48 6.670902 TGGGCACTAAGTTAATAGGTTAGTCT 59.329 38.462 0.00 0.00 35.30 3.24
48 49 7.147776 TGGGCACTAAGTTAATAGGTTAGTCTC 60.148 40.741 0.00 0.00 35.30 3.36
49 50 7.147776 GGGCACTAAGTTAATAGGTTAGTCTCA 60.148 40.741 0.00 0.00 35.30 3.27
50 51 8.255905 GGCACTAAGTTAATAGGTTAGTCTCAA 58.744 37.037 0.00 0.00 35.30 3.02
51 52 9.303537 GCACTAAGTTAATAGGTTAGTCTCAAG 57.696 37.037 0.00 0.00 35.30 3.02
161 162 5.353394 TTGGAGACATATCAACACTACCC 57.647 43.478 0.00 0.00 42.32 3.69
162 163 3.709653 TGGAGACATATCAACACTACCCC 59.290 47.826 0.00 0.00 33.40 4.95
163 164 3.967987 GGAGACATATCAACACTACCCCT 59.032 47.826 0.00 0.00 0.00 4.79
164 165 4.409247 GGAGACATATCAACACTACCCCTT 59.591 45.833 0.00 0.00 0.00 3.95
165 166 5.104485 GGAGACATATCAACACTACCCCTTT 60.104 44.000 0.00 0.00 0.00 3.11
166 167 6.099269 GGAGACATATCAACACTACCCCTTTA 59.901 42.308 0.00 0.00 0.00 1.85
167 168 7.125792 AGACATATCAACACTACCCCTTTAG 57.874 40.000 0.00 0.00 0.00 1.85
168 169 6.901300 AGACATATCAACACTACCCCTTTAGA 59.099 38.462 0.00 0.00 0.00 2.10
169 170 7.569111 AGACATATCAACACTACCCCTTTAGAT 59.431 37.037 0.00 0.00 0.00 1.98
170 171 7.736893 ACATATCAACACTACCCCTTTAGATC 58.263 38.462 0.00 0.00 0.00 2.75
171 172 7.569111 ACATATCAACACTACCCCTTTAGATCT 59.431 37.037 0.00 0.00 0.00 2.75
172 173 6.893020 ATCAACACTACCCCTTTAGATCTT 57.107 37.500 0.00 0.00 0.00 2.40
173 174 7.989947 ATCAACACTACCCCTTTAGATCTTA 57.010 36.000 0.00 0.00 0.00 2.10
174 175 7.801893 TCAACACTACCCCTTTAGATCTTAA 57.198 36.000 0.00 0.00 0.00 1.85
175 176 8.388656 TCAACACTACCCCTTTAGATCTTAAT 57.611 34.615 0.00 0.00 0.00 1.40
176 177 8.265055 TCAACACTACCCCTTTAGATCTTAATG 58.735 37.037 0.00 0.00 0.00 1.90
177 178 6.592870 ACACTACCCCTTTAGATCTTAATGC 58.407 40.000 0.00 0.00 0.00 3.56
178 179 6.387220 ACACTACCCCTTTAGATCTTAATGCT 59.613 38.462 0.00 0.00 0.00 3.79
179 180 7.092399 ACACTACCCCTTTAGATCTTAATGCTT 60.092 37.037 0.00 0.00 0.00 3.91
180 181 7.775561 CACTACCCCTTTAGATCTTAATGCTTT 59.224 37.037 0.00 0.00 0.00 3.51
181 182 7.993758 ACTACCCCTTTAGATCTTAATGCTTTC 59.006 37.037 0.00 0.00 0.00 2.62
182 183 6.129874 ACCCCTTTAGATCTTAATGCTTTCC 58.870 40.000 0.00 0.00 0.00 3.13
183 184 5.239525 CCCCTTTAGATCTTAATGCTTTCCG 59.760 44.000 0.00 0.00 0.00 4.30
184 185 5.823045 CCCTTTAGATCTTAATGCTTTCCGT 59.177 40.000 0.00 0.00 0.00 4.69
185 186 6.238484 CCCTTTAGATCTTAATGCTTTCCGTG 60.238 42.308 0.00 0.00 0.00 4.94
186 187 6.238484 CCTTTAGATCTTAATGCTTTCCGTGG 60.238 42.308 0.00 0.00 0.00 4.94
187 188 4.487714 AGATCTTAATGCTTTCCGTGGA 57.512 40.909 0.00 0.00 0.00 4.02
188 189 4.192317 AGATCTTAATGCTTTCCGTGGAC 58.808 43.478 0.00 0.00 0.00 4.02
189 190 2.706890 TCTTAATGCTTTCCGTGGACC 58.293 47.619 0.00 0.00 0.00 4.46
190 191 1.743394 CTTAATGCTTTCCGTGGACCC 59.257 52.381 0.00 0.00 0.00 4.46
191 192 0.693622 TAATGCTTTCCGTGGACCCA 59.306 50.000 0.00 0.00 0.00 4.51
192 193 0.178975 AATGCTTTCCGTGGACCCAA 60.179 50.000 0.00 0.00 0.00 4.12
193 194 0.609131 ATGCTTTCCGTGGACCCAAG 60.609 55.000 0.00 0.00 0.00 3.61
194 195 2.626780 GCTTTCCGTGGACCCAAGC 61.627 63.158 7.77 7.77 31.30 4.01
195 196 1.073199 CTTTCCGTGGACCCAAGCT 59.927 57.895 0.00 0.00 0.00 3.74
196 197 0.323629 CTTTCCGTGGACCCAAGCTA 59.676 55.000 0.00 0.00 0.00 3.32
197 198 0.988832 TTTCCGTGGACCCAAGCTAT 59.011 50.000 0.00 0.00 0.00 2.97
198 199 0.988832 TTCCGTGGACCCAAGCTATT 59.011 50.000 0.00 0.00 0.00 1.73
199 200 1.868713 TCCGTGGACCCAAGCTATTA 58.131 50.000 0.00 0.00 0.00 0.98
200 201 2.404559 TCCGTGGACCCAAGCTATTAT 58.595 47.619 0.00 0.00 0.00 1.28
201 202 2.367567 TCCGTGGACCCAAGCTATTATC 59.632 50.000 0.00 0.00 0.00 1.75
202 203 2.550208 CCGTGGACCCAAGCTATTATCC 60.550 54.545 0.00 0.00 0.00 2.59
203 204 2.368875 CGTGGACCCAAGCTATTATCCT 59.631 50.000 8.11 0.00 0.00 3.24
204 205 3.181454 CGTGGACCCAAGCTATTATCCTT 60.181 47.826 8.11 0.00 0.00 3.36
205 206 4.390264 GTGGACCCAAGCTATTATCCTTC 58.610 47.826 8.11 0.27 0.00 3.46
206 207 4.103311 GTGGACCCAAGCTATTATCCTTCT 59.897 45.833 8.11 0.00 0.00 2.85
207 208 4.726825 TGGACCCAAGCTATTATCCTTCTT 59.273 41.667 8.11 0.00 0.00 2.52
208 209 5.163195 TGGACCCAAGCTATTATCCTTCTTC 60.163 44.000 8.11 0.00 0.00 2.87
209 210 4.962155 ACCCAAGCTATTATCCTTCTTCG 58.038 43.478 0.00 0.00 0.00 3.79
210 211 4.409247 ACCCAAGCTATTATCCTTCTTCGT 59.591 41.667 0.00 0.00 0.00 3.85
211 212 4.991687 CCCAAGCTATTATCCTTCTTCGTC 59.008 45.833 0.00 0.00 0.00 4.20
212 213 4.991687 CCAAGCTATTATCCTTCTTCGTCC 59.008 45.833 0.00 0.00 0.00 4.79
213 214 5.453339 CCAAGCTATTATCCTTCTTCGTCCA 60.453 44.000 0.00 0.00 0.00 4.02
214 215 5.871396 AGCTATTATCCTTCTTCGTCCAA 57.129 39.130 0.00 0.00 0.00 3.53
215 216 6.426646 AGCTATTATCCTTCTTCGTCCAAT 57.573 37.500 0.00 0.00 0.00 3.16
216 217 6.459923 AGCTATTATCCTTCTTCGTCCAATC 58.540 40.000 0.00 0.00 0.00 2.67
217 218 5.639931 GCTATTATCCTTCTTCGTCCAATCC 59.360 44.000 0.00 0.00 0.00 3.01
218 219 2.604046 ATCCTTCTTCGTCCAATCCG 57.396 50.000 0.00 0.00 0.00 4.18
219 220 1.552578 TCCTTCTTCGTCCAATCCGA 58.447 50.000 0.00 0.00 0.00 4.55
220 221 1.203994 TCCTTCTTCGTCCAATCCGAC 59.796 52.381 0.00 0.00 33.41 4.79
221 222 1.067142 CCTTCTTCGTCCAATCCGACA 60.067 52.381 0.00 0.00 33.41 4.35
222 223 2.611971 CCTTCTTCGTCCAATCCGACAA 60.612 50.000 0.00 0.00 33.41 3.18
223 224 2.074547 TCTTCGTCCAATCCGACAAC 57.925 50.000 0.00 0.00 33.41 3.32
224 225 1.616865 TCTTCGTCCAATCCGACAACT 59.383 47.619 0.00 0.00 33.41 3.16
225 226 2.036733 TCTTCGTCCAATCCGACAACTT 59.963 45.455 0.00 0.00 33.41 2.66
226 227 2.536761 TCGTCCAATCCGACAACTTT 57.463 45.000 0.00 0.00 32.74 2.66
227 228 2.409975 TCGTCCAATCCGACAACTTTC 58.590 47.619 0.00 0.00 32.74 2.62
228 229 2.036733 TCGTCCAATCCGACAACTTTCT 59.963 45.455 0.00 0.00 32.74 2.52
229 230 2.412089 CGTCCAATCCGACAACTTTCTC 59.588 50.000 0.00 0.00 32.74 2.87
230 231 3.665190 GTCCAATCCGACAACTTTCTCT 58.335 45.455 0.00 0.00 32.74 3.10
231 232 4.065789 GTCCAATCCGACAACTTTCTCTT 58.934 43.478 0.00 0.00 32.74 2.85
232 233 4.515567 GTCCAATCCGACAACTTTCTCTTT 59.484 41.667 0.00 0.00 32.74 2.52
233 234 4.755123 TCCAATCCGACAACTTTCTCTTTC 59.245 41.667 0.00 0.00 0.00 2.62
234 235 4.377431 CCAATCCGACAACTTTCTCTTTCG 60.377 45.833 0.00 0.00 0.00 3.46
235 236 3.720949 TCCGACAACTTTCTCTTTCGA 57.279 42.857 0.00 0.00 0.00 3.71
236 237 3.639538 TCCGACAACTTTCTCTTTCGAG 58.360 45.455 0.00 0.00 38.67 4.04
237 238 3.067742 TCCGACAACTTTCTCTTTCGAGT 59.932 43.478 0.00 0.00 38.45 4.18
238 239 3.182572 CCGACAACTTTCTCTTTCGAGTG 59.817 47.826 0.00 0.00 38.45 3.51
239 240 3.362110 CGACAACTTTCTCTTTCGAGTGC 60.362 47.826 0.00 0.00 38.45 4.40
240 241 2.872858 ACAACTTTCTCTTTCGAGTGCC 59.127 45.455 0.00 0.00 38.45 5.01
241 242 2.171341 ACTTTCTCTTTCGAGTGCCC 57.829 50.000 0.00 0.00 38.45 5.36
242 243 1.071605 CTTTCTCTTTCGAGTGCCCG 58.928 55.000 0.00 0.00 38.45 6.13
243 244 0.320421 TTTCTCTTTCGAGTGCCCGG 60.320 55.000 0.00 0.00 38.45 5.73
244 245 1.469335 TTCTCTTTCGAGTGCCCGGT 61.469 55.000 0.00 0.00 38.45 5.28
245 246 1.446272 CTCTTTCGAGTGCCCGGTC 60.446 63.158 0.00 0.00 32.47 4.79
246 247 2.434359 CTTTCGAGTGCCCGGTCC 60.434 66.667 0.00 0.00 0.00 4.46
247 248 3.234630 CTTTCGAGTGCCCGGTCCA 62.235 63.158 0.00 0.00 0.00 4.02
248 249 2.521958 CTTTCGAGTGCCCGGTCCAT 62.522 60.000 0.00 0.00 0.00 3.41
249 250 2.119484 TTTCGAGTGCCCGGTCCATT 62.119 55.000 0.00 0.00 0.00 3.16
250 251 2.796483 TTCGAGTGCCCGGTCCATTG 62.796 60.000 0.00 0.00 0.00 2.82
251 252 2.438434 GAGTGCCCGGTCCATTGG 60.438 66.667 0.00 0.00 0.00 3.16
252 253 4.740822 AGTGCCCGGTCCATTGGC 62.741 66.667 0.00 7.05 45.56 4.52
255 256 3.219198 GCCCGGTCCATTGGCATC 61.219 66.667 0.00 0.00 44.70 3.91
256 257 2.275089 CCCGGTCCATTGGCATCA 59.725 61.111 0.00 0.00 0.00 3.07
257 258 1.825191 CCCGGTCCATTGGCATCAG 60.825 63.158 0.00 0.00 0.00 2.90
258 259 2.484062 CCGGTCCATTGGCATCAGC 61.484 63.158 0.00 0.00 41.10 4.26
259 260 2.827051 CGGTCCATTGGCATCAGCG 61.827 63.158 0.00 0.00 43.41 5.18
260 261 2.484062 GGTCCATTGGCATCAGCGG 61.484 63.158 0.00 0.00 43.41 5.52
261 262 1.750399 GTCCATTGGCATCAGCGGT 60.750 57.895 0.00 0.00 43.41 5.68
262 263 0.463654 GTCCATTGGCATCAGCGGTA 60.464 55.000 0.00 0.00 43.41 4.02
263 264 0.254462 TCCATTGGCATCAGCGGTAA 59.746 50.000 0.00 0.00 43.41 2.85
264 265 1.133823 TCCATTGGCATCAGCGGTAAT 60.134 47.619 0.00 0.00 43.41 1.89
265 266 1.267806 CCATTGGCATCAGCGGTAATC 59.732 52.381 0.00 0.00 43.41 1.75
266 267 2.224606 CATTGGCATCAGCGGTAATCT 58.775 47.619 0.00 0.00 43.41 2.40
267 268 1.667236 TTGGCATCAGCGGTAATCTG 58.333 50.000 0.00 0.00 43.41 2.90
268 269 0.815213 TGGCATCAGCGGTAATCTGC 60.815 55.000 0.00 0.00 45.49 4.26
277 278 1.940613 GCGGTAATCTGCTTTAGGTGG 59.059 52.381 0.00 0.00 42.20 4.61
278 279 2.419574 GCGGTAATCTGCTTTAGGTGGA 60.420 50.000 0.00 0.00 42.20 4.02
279 280 3.458189 CGGTAATCTGCTTTAGGTGGAG 58.542 50.000 0.00 0.00 0.00 3.86
280 281 3.118738 CGGTAATCTGCTTTAGGTGGAGT 60.119 47.826 0.00 0.00 0.00 3.85
281 282 4.098960 CGGTAATCTGCTTTAGGTGGAGTA 59.901 45.833 0.00 0.00 0.00 2.59
282 283 5.602628 GGTAATCTGCTTTAGGTGGAGTAG 58.397 45.833 0.00 0.00 0.00 2.57
283 284 5.128991 GGTAATCTGCTTTAGGTGGAGTAGT 59.871 44.000 0.00 0.00 0.00 2.73
284 285 5.346181 AATCTGCTTTAGGTGGAGTAGTC 57.654 43.478 0.00 0.00 0.00 2.59
285 286 2.753452 TCTGCTTTAGGTGGAGTAGTCG 59.247 50.000 0.00 0.00 0.00 4.18
286 287 2.753452 CTGCTTTAGGTGGAGTAGTCGA 59.247 50.000 0.00 0.00 0.00 4.20
287 288 3.362706 TGCTTTAGGTGGAGTAGTCGAT 58.637 45.455 0.00 0.00 0.00 3.59
288 289 3.130516 TGCTTTAGGTGGAGTAGTCGATG 59.869 47.826 0.00 0.00 0.00 3.84
289 290 3.380637 GCTTTAGGTGGAGTAGTCGATGA 59.619 47.826 0.00 0.00 0.00 2.92
290 291 4.734108 GCTTTAGGTGGAGTAGTCGATGAC 60.734 50.000 0.00 0.00 0.00 3.06
291 292 2.509166 AGGTGGAGTAGTCGATGACA 57.491 50.000 0.00 0.00 34.60 3.58
292 293 3.019799 AGGTGGAGTAGTCGATGACAT 57.980 47.619 0.00 0.00 34.60 3.06
293 294 2.690497 AGGTGGAGTAGTCGATGACATG 59.310 50.000 0.00 0.00 34.60 3.21
294 295 2.427453 GGTGGAGTAGTCGATGACATGT 59.573 50.000 0.00 0.00 34.60 3.21
295 296 3.489398 GGTGGAGTAGTCGATGACATGTC 60.489 52.174 19.27 19.27 34.60 3.06
296 297 3.128764 GTGGAGTAGTCGATGACATGTCA 59.871 47.826 29.67 29.67 44.59 3.58
297 298 3.761752 TGGAGTAGTCGATGACATGTCAA 59.238 43.478 31.00 13.51 43.58 3.18
298 299 4.219725 TGGAGTAGTCGATGACATGTCAAA 59.780 41.667 31.00 17.13 43.58 2.69
299 300 5.105351 TGGAGTAGTCGATGACATGTCAAAT 60.105 40.000 31.00 16.93 43.58 2.32
300 301 5.233050 GGAGTAGTCGATGACATGTCAAATG 59.767 44.000 31.00 22.12 43.58 2.32
301 302 5.724328 AGTAGTCGATGACATGTCAAATGT 58.276 37.500 31.00 15.78 43.58 2.71
302 303 4.934075 AGTCGATGACATGTCAAATGTG 57.066 40.909 31.00 18.26 43.58 3.21
303 304 3.125829 AGTCGATGACATGTCAAATGTGC 59.874 43.478 31.00 18.24 43.58 4.57
304 305 2.419673 TCGATGACATGTCAAATGTGCC 59.580 45.455 31.00 13.27 43.58 5.01
305 306 2.421073 CGATGACATGTCAAATGTGCCT 59.579 45.455 31.00 13.10 43.58 4.75
306 307 3.119743 CGATGACATGTCAAATGTGCCTT 60.120 43.478 31.00 12.36 43.58 4.35
307 308 3.646611 TGACATGTCAAATGTGCCTTG 57.353 42.857 26.02 0.00 36.53 3.61
308 309 2.957680 TGACATGTCAAATGTGCCTTGT 59.042 40.909 26.02 0.00 36.53 3.16
309 310 3.384146 TGACATGTCAAATGTGCCTTGTT 59.616 39.130 26.02 0.00 36.53 2.83
310 311 3.981211 ACATGTCAAATGTGCCTTGTTC 58.019 40.909 0.00 0.00 0.00 3.18
311 312 3.243839 ACATGTCAAATGTGCCTTGTTCC 60.244 43.478 0.00 0.00 0.00 3.62
312 313 2.665165 TGTCAAATGTGCCTTGTTCCT 58.335 42.857 0.00 0.00 0.00 3.36
313 314 2.622942 TGTCAAATGTGCCTTGTTCCTC 59.377 45.455 0.00 0.00 0.00 3.71
314 315 2.887152 GTCAAATGTGCCTTGTTCCTCT 59.113 45.455 0.00 0.00 0.00 3.69
315 316 3.057946 GTCAAATGTGCCTTGTTCCTCTC 60.058 47.826 0.00 0.00 0.00 3.20
316 317 2.206576 AATGTGCCTTGTTCCTCTCC 57.793 50.000 0.00 0.00 0.00 3.71
317 318 1.366319 ATGTGCCTTGTTCCTCTCCT 58.634 50.000 0.00 0.00 0.00 3.69
318 319 2.024176 TGTGCCTTGTTCCTCTCCTA 57.976 50.000 0.00 0.00 0.00 2.94
319 320 2.551270 TGTGCCTTGTTCCTCTCCTAT 58.449 47.619 0.00 0.00 0.00 2.57
320 321 2.237143 TGTGCCTTGTTCCTCTCCTATG 59.763 50.000 0.00 0.00 0.00 2.23
321 322 1.839994 TGCCTTGTTCCTCTCCTATGG 59.160 52.381 0.00 0.00 0.00 2.74
322 323 1.475930 GCCTTGTTCCTCTCCTATGGC 60.476 57.143 0.00 0.00 0.00 4.40
323 324 2.122768 CCTTGTTCCTCTCCTATGGCT 58.877 52.381 0.00 0.00 0.00 4.75
324 325 2.158842 CCTTGTTCCTCTCCTATGGCTG 60.159 54.545 0.00 0.00 0.00 4.85
325 326 0.833287 TGTTCCTCTCCTATGGCTGC 59.167 55.000 0.00 0.00 0.00 5.25
326 327 0.107643 GTTCCTCTCCTATGGCTGCC 59.892 60.000 12.87 12.87 0.00 4.85
327 328 0.030705 TTCCTCTCCTATGGCTGCCT 60.031 55.000 21.03 8.02 0.00 4.75
328 329 0.030705 TCCTCTCCTATGGCTGCCTT 60.031 55.000 21.03 16.33 0.00 4.35
329 330 0.842635 CCTCTCCTATGGCTGCCTTT 59.157 55.000 21.03 9.99 0.00 3.11
330 331 1.202746 CCTCTCCTATGGCTGCCTTTC 60.203 57.143 21.03 0.00 0.00 2.62
331 332 0.465705 TCTCCTATGGCTGCCTTTCG 59.534 55.000 21.03 8.21 0.00 3.46
332 333 0.533755 CTCCTATGGCTGCCTTTCGG 60.534 60.000 21.03 16.27 0.00 4.30
342 343 2.049433 CCTTTCGGCGACACTCGT 60.049 61.111 10.16 0.00 42.81 4.18
343 344 2.087009 CCTTTCGGCGACACTCGTC 61.087 63.158 10.16 0.00 42.81 4.20
344 345 2.049802 TTTCGGCGACACTCGTCC 60.050 61.111 10.16 0.00 42.25 4.79
345 346 2.742710 CTTTCGGCGACACTCGTCCA 62.743 60.000 10.16 0.00 42.25 4.02
346 347 2.742710 TTTCGGCGACACTCGTCCAG 62.743 60.000 10.16 0.00 42.25 3.86
347 348 4.778415 CGGCGACACTCGTCCAGG 62.778 72.222 0.00 0.00 42.25 4.45
348 349 3.681835 GGCGACACTCGTCCAGGT 61.682 66.667 0.00 0.00 42.81 4.00
349 350 2.338984 GCGACACTCGTCCAGGTT 59.661 61.111 0.00 0.00 42.81 3.50
350 351 1.733399 GCGACACTCGTCCAGGTTC 60.733 63.158 0.00 0.00 42.81 3.62
351 352 1.957562 CGACACTCGTCCAGGTTCT 59.042 57.895 0.00 0.00 39.11 3.01
352 353 1.162698 CGACACTCGTCCAGGTTCTA 58.837 55.000 0.00 0.00 39.11 2.10
353 354 1.130749 CGACACTCGTCCAGGTTCTAG 59.869 57.143 0.00 0.00 39.11 2.43
354 355 1.473278 GACACTCGTCCAGGTTCTAGG 59.527 57.143 0.00 0.00 36.02 3.02
355 356 0.818296 CACTCGTCCAGGTTCTAGGG 59.182 60.000 0.00 0.00 0.00 3.53
356 357 0.408700 ACTCGTCCAGGTTCTAGGGT 59.591 55.000 0.00 0.00 0.00 4.34
357 358 0.818296 CTCGTCCAGGTTCTAGGGTG 59.182 60.000 0.00 0.00 0.00 4.61
358 359 0.406750 TCGTCCAGGTTCTAGGGTGA 59.593 55.000 0.00 0.00 0.00 4.02
359 360 1.203087 TCGTCCAGGTTCTAGGGTGAA 60.203 52.381 0.00 0.00 0.00 3.18
360 361 1.067071 CGTCCAGGTTCTAGGGTGAAC 60.067 57.143 0.00 0.00 43.88 3.18
361 362 1.975680 GTCCAGGTTCTAGGGTGAACA 59.024 52.381 9.18 0.00 45.74 3.18
362 363 2.572104 GTCCAGGTTCTAGGGTGAACAT 59.428 50.000 9.18 0.00 45.74 2.71
364 365 3.703001 CAGGTTCTAGGGTGAACATGT 57.297 47.619 12.07 0.00 46.84 3.21
365 366 3.600388 CAGGTTCTAGGGTGAACATGTC 58.400 50.000 0.00 0.00 46.84 3.06
366 367 2.572104 AGGTTCTAGGGTGAACATGTCC 59.428 50.000 0.00 0.00 45.74 4.02
367 368 2.304761 GGTTCTAGGGTGAACATGTCCA 59.695 50.000 0.00 0.00 45.74 4.02
368 369 3.054361 GGTTCTAGGGTGAACATGTCCAT 60.054 47.826 0.00 0.00 45.74 3.41
369 370 4.192317 GTTCTAGGGTGAACATGTCCATC 58.808 47.826 0.00 0.00 44.00 3.51
370 371 3.724478 TCTAGGGTGAACATGTCCATCT 58.276 45.455 0.00 0.00 0.00 2.90
371 372 4.878968 TCTAGGGTGAACATGTCCATCTA 58.121 43.478 0.00 0.00 0.00 1.98
372 373 5.467738 TCTAGGGTGAACATGTCCATCTAT 58.532 41.667 0.00 0.00 0.00 1.98
373 374 4.428294 AGGGTGAACATGTCCATCTATG 57.572 45.455 0.00 0.00 0.00 2.23
374 375 4.040047 AGGGTGAACATGTCCATCTATGA 58.960 43.478 0.00 0.00 0.00 2.15
375 376 4.130118 GGGTGAACATGTCCATCTATGAC 58.870 47.826 0.00 0.00 0.00 3.06
376 377 3.804325 GGTGAACATGTCCATCTATGACG 59.196 47.826 0.00 0.00 0.00 4.35
377 378 3.804325 GTGAACATGTCCATCTATGACGG 59.196 47.826 0.00 0.00 0.00 4.79
378 379 3.450817 TGAACATGTCCATCTATGACGGT 59.549 43.478 0.00 0.00 0.00 4.83
379 380 3.459232 ACATGTCCATCTATGACGGTG 57.541 47.619 0.00 0.00 0.00 4.94
380 381 2.138320 CATGTCCATCTATGACGGTGC 58.862 52.381 0.00 0.00 0.00 5.01
381 382 1.190643 TGTCCATCTATGACGGTGCA 58.809 50.000 0.00 0.00 0.00 4.57
382 383 1.762370 TGTCCATCTATGACGGTGCAT 59.238 47.619 0.00 0.00 0.00 3.96
383 384 2.224042 TGTCCATCTATGACGGTGCATC 60.224 50.000 0.00 0.00 0.00 3.91
384 385 1.000274 TCCATCTATGACGGTGCATCG 60.000 52.381 19.79 19.79 0.00 3.84
385 386 0.786581 CATCTATGACGGTGCATCGC 59.213 55.000 21.49 13.08 0.00 4.58
386 387 0.319900 ATCTATGACGGTGCATCGCC 60.320 55.000 21.49 9.62 0.00 5.54
387 388 1.068083 CTATGACGGTGCATCGCCT 59.932 57.895 21.49 6.72 0.00 5.52
388 389 0.530650 CTATGACGGTGCATCGCCTT 60.531 55.000 21.49 9.56 0.00 4.35
389 390 0.107897 TATGACGGTGCATCGCCTTT 60.108 50.000 21.49 0.00 0.00 3.11
390 391 1.369091 ATGACGGTGCATCGCCTTTC 61.369 55.000 21.49 10.19 0.00 2.62
391 392 3.083600 GACGGTGCATCGCCTTTCG 62.084 63.158 21.49 1.99 40.15 3.46
401 402 4.760047 GCCTTTCGAGCCAGGCGA 62.760 66.667 14.52 0.00 46.19 5.54
402 403 2.510238 CCTTTCGAGCCAGGCGAG 60.510 66.667 5.55 4.12 39.14 5.03
403 404 2.510238 CTTTCGAGCCAGGCGAGG 60.510 66.667 5.55 0.00 39.14 4.63
404 405 2.994995 TTTCGAGCCAGGCGAGGA 60.995 61.111 5.55 1.52 39.14 3.71
405 406 2.897641 CTTTCGAGCCAGGCGAGGAG 62.898 65.000 5.55 2.90 39.14 3.69
423 424 3.567473 GCAGTGGCCTTCTTCGAC 58.433 61.111 3.32 0.00 0.00 4.20
424 425 1.301716 GCAGTGGCCTTCTTCGACA 60.302 57.895 3.32 0.00 0.00 4.35
425 426 0.884704 GCAGTGGCCTTCTTCGACAA 60.885 55.000 3.32 0.00 0.00 3.18
426 427 1.813513 CAGTGGCCTTCTTCGACAAT 58.186 50.000 3.32 0.00 0.00 2.71
427 428 1.466167 CAGTGGCCTTCTTCGACAATG 59.534 52.381 3.32 0.00 0.00 2.82
428 429 0.804989 GTGGCCTTCTTCGACAATGG 59.195 55.000 3.32 0.00 0.00 3.16
429 430 0.690192 TGGCCTTCTTCGACAATGGA 59.310 50.000 3.32 0.00 0.00 3.41
430 431 1.281867 TGGCCTTCTTCGACAATGGAT 59.718 47.619 3.32 0.00 0.00 3.41
431 432 1.943340 GGCCTTCTTCGACAATGGATC 59.057 52.381 0.00 0.00 0.00 3.36
432 433 2.420687 GGCCTTCTTCGACAATGGATCT 60.421 50.000 0.00 0.00 0.00 2.75
433 434 2.611292 GCCTTCTTCGACAATGGATCTG 59.389 50.000 0.00 0.00 0.00 2.90
434 435 3.201290 CCTTCTTCGACAATGGATCTGG 58.799 50.000 0.00 0.00 0.00 3.86
435 436 3.118629 CCTTCTTCGACAATGGATCTGGA 60.119 47.826 0.00 0.00 0.00 3.86
436 437 4.444022 CCTTCTTCGACAATGGATCTGGAT 60.444 45.833 0.00 0.00 0.00 3.41
437 438 4.063998 TCTTCGACAATGGATCTGGATG 57.936 45.455 0.00 0.00 0.00 3.51
438 439 2.916702 TCGACAATGGATCTGGATGG 57.083 50.000 0.00 0.00 0.00 3.51
439 440 2.118679 TCGACAATGGATCTGGATGGT 58.881 47.619 0.00 0.00 0.00 3.55
440 441 2.505407 TCGACAATGGATCTGGATGGTT 59.495 45.455 0.00 0.00 0.00 3.67
441 442 2.615447 CGACAATGGATCTGGATGGTTG 59.385 50.000 0.00 0.00 0.00 3.77
442 443 3.624777 GACAATGGATCTGGATGGTTGT 58.375 45.455 0.00 0.00 0.00 3.32
443 444 3.359033 ACAATGGATCTGGATGGTTGTG 58.641 45.455 0.00 0.00 0.00 3.33
444 445 3.245371 ACAATGGATCTGGATGGTTGTGT 60.245 43.478 0.00 0.00 0.00 3.72
445 446 3.744940 ATGGATCTGGATGGTTGTGTT 57.255 42.857 0.00 0.00 0.00 3.32
446 447 2.794103 TGGATCTGGATGGTTGTGTTG 58.206 47.619 0.00 0.00 0.00 3.33
447 448 1.474077 GGATCTGGATGGTTGTGTTGC 59.526 52.381 0.00 0.00 0.00 4.17
448 449 2.161855 GATCTGGATGGTTGTGTTGCA 58.838 47.619 0.00 0.00 0.00 4.08
459 460 0.922626 TGTGTTGCATAGGGCCCATA 59.077 50.000 27.56 14.08 43.89 2.74
462 463 2.965147 GTGTTGCATAGGGCCCATAATT 59.035 45.455 27.56 4.81 43.89 1.40
463 464 3.387699 GTGTTGCATAGGGCCCATAATTT 59.612 43.478 27.56 3.89 43.89 1.82
464 465 3.387374 TGTTGCATAGGGCCCATAATTTG 59.613 43.478 27.56 9.77 43.89 2.32
465 466 2.607499 TGCATAGGGCCCATAATTTGG 58.393 47.619 27.56 5.16 46.00 3.28
466 467 2.090831 TGCATAGGGCCCATAATTTGGT 60.091 45.455 27.56 1.16 44.83 3.67
467 468 2.299867 GCATAGGGCCCATAATTTGGTG 59.700 50.000 27.56 9.50 44.83 4.17
468 469 3.843422 CATAGGGCCCATAATTTGGTGA 58.157 45.455 27.56 0.00 44.83 4.02
469 470 4.419282 CATAGGGCCCATAATTTGGTGAT 58.581 43.478 27.56 0.00 44.83 3.06
470 471 2.681422 AGGGCCCATAATTTGGTGATG 58.319 47.619 27.56 0.00 44.83 3.07
472 473 2.397597 GGCCCATAATTTGGTGATGGT 58.602 47.619 0.00 0.00 44.83 3.55
491 493 2.665052 GGTGTACCTTTTCATCGACGTC 59.335 50.000 5.18 5.18 0.00 4.34
528 530 1.152881 GCCGGCATTCTCCATTCCT 60.153 57.895 24.80 0.00 0.00 3.36
530 532 1.312815 CCGGCATTCTCCATTCCTTC 58.687 55.000 0.00 0.00 0.00 3.46
531 533 1.408683 CCGGCATTCTCCATTCCTTCA 60.409 52.381 0.00 0.00 0.00 3.02
537 539 5.070047 GGCATTCTCCATTCCTTCATGATTT 59.930 40.000 0.00 0.00 0.00 2.17
541 543 6.764308 TCTCCATTCCTTCATGATTTGTTC 57.236 37.500 0.00 0.00 0.00 3.18
543 545 5.009631 TCCATTCCTTCATGATTTGTTCGT 58.990 37.500 0.00 0.00 0.00 3.85
566 568 3.192799 GAGGACCTCGTCATCTCCA 57.807 57.895 5.55 0.00 39.78 3.86
582 584 4.836125 TCTCCAAGCAATGTGTTTCTTC 57.164 40.909 0.00 0.00 0.00 2.87
590 592 4.335315 AGCAATGTGTTTCTTCTCGTTCAA 59.665 37.500 0.00 0.00 0.00 2.69
613 615 8.440059 TCAATTTTAGCTTGTTGTATACAGTCG 58.560 33.333 5.56 0.00 38.19 4.18
619 621 1.473677 TGTTGTATACAGTCGTCCCGG 59.526 52.381 5.56 0.00 31.68 5.73
620 622 1.474077 GTTGTATACAGTCGTCCCGGT 59.526 52.381 5.56 0.00 0.00 5.28
621 623 1.838112 TGTATACAGTCGTCCCGGTT 58.162 50.000 0.08 0.00 0.00 4.44
622 624 2.997980 TGTATACAGTCGTCCCGGTTA 58.002 47.619 0.08 0.00 0.00 2.85
623 625 3.554934 TGTATACAGTCGTCCCGGTTAT 58.445 45.455 0.08 0.00 0.00 1.89
624 626 4.713553 TGTATACAGTCGTCCCGGTTATA 58.286 43.478 0.08 0.00 0.00 0.98
625 627 5.316167 TGTATACAGTCGTCCCGGTTATAT 58.684 41.667 0.08 0.00 0.00 0.86
626 628 5.769662 TGTATACAGTCGTCCCGGTTATATT 59.230 40.000 0.08 0.00 0.00 1.28
627 629 6.939730 TGTATACAGTCGTCCCGGTTATATTA 59.060 38.462 0.08 0.00 0.00 0.98
628 630 4.843220 ACAGTCGTCCCGGTTATATTAG 57.157 45.455 0.00 0.00 0.00 1.73
632 634 6.716628 ACAGTCGTCCCGGTTATATTAGATTA 59.283 38.462 0.00 0.00 0.00 1.75
674 2425 1.269448 GGAGCGGTGCAAAGAATCAAA 59.731 47.619 0.00 0.00 0.00 2.69
676 2427 2.726241 GAGCGGTGCAAAGAATCAAAAC 59.274 45.455 0.00 0.00 0.00 2.43
688 2439 3.832490 AGAATCAAAACAAACCTAGGGGC 59.168 43.478 14.81 0.00 35.63 5.80
736 2488 3.189287 CCCTGCATACACAAACAACTCTC 59.811 47.826 0.00 0.00 0.00 3.20
740 2492 3.247648 GCATACACAAACAACTCTCGTGT 59.752 43.478 0.00 0.00 42.98 4.49
741 2493 4.446385 GCATACACAAACAACTCTCGTGTA 59.554 41.667 0.00 0.00 44.54 2.90
745 2497 2.102588 ACAAACAACTCTCGTGTAGCCT 59.897 45.455 0.00 0.00 0.00 4.58
749 2501 2.094494 ACAACTCTCGTGTAGCCTCATG 60.094 50.000 0.00 0.00 0.00 3.07
755 2507 3.126831 CTCGTGTAGCCTCATGGAATTC 58.873 50.000 0.00 0.00 34.57 2.17
758 2510 2.173569 GTGTAGCCTCATGGAATTCCCT 59.826 50.000 21.90 9.42 35.38 4.20
780 2532 5.249393 CCTAGGTGGAATAGAATATGCCAGT 59.751 44.000 0.00 0.00 38.35 4.00
822 2574 2.062519 GAGCGATCTAAGAAATCCCGC 58.937 52.381 0.00 0.00 41.22 6.13
823 2575 1.412710 AGCGATCTAAGAAATCCCGCA 59.587 47.619 0.00 0.00 43.04 5.69
914 2668 4.043037 AGACTTCCTATTTAGTTCGGCG 57.957 45.455 0.00 0.00 0.00 6.46
931 2685 0.836400 GCGGATCCCCCAATCCTCTA 60.836 60.000 6.06 0.00 42.68 2.43
958 2712 1.913419 TCCACCCAAATACTCCAGGAC 59.087 52.381 0.00 0.00 0.00 3.85
961 2715 2.571653 CACCCAAATACTCCAGGACAGA 59.428 50.000 0.00 0.00 0.00 3.41
1020 2774 2.517166 GGGGATCGGCCAAAGCTC 60.517 66.667 2.24 0.00 39.73 4.09
1215 2969 3.430862 CGGCACCCCAACATCGTG 61.431 66.667 0.00 0.00 0.00 4.35
1221 2975 2.693762 CCCCAACATCGTGCAGCTG 61.694 63.158 10.11 10.11 0.00 4.24
1236 2990 2.872557 CTGCACAAGGTGATGGCG 59.127 61.111 0.00 0.00 35.23 5.69
1248 3002 4.329545 ATGGCGTGCAAGTCCCGT 62.330 61.111 0.72 0.00 0.00 5.28
1362 3116 4.426112 CAGCAGCTCGTCTCGGCA 62.426 66.667 0.00 0.00 0.00 5.69
1539 3293 3.145551 CCCCTGTACGTCCCTCCG 61.146 72.222 0.00 0.00 0.00 4.63
1656 3410 1.721257 GCGACGACGACTTCATCACG 61.721 60.000 12.29 0.00 42.66 4.35
1659 3413 0.800631 ACGACGACTTCATCACGCTA 59.199 50.000 0.00 0.00 32.32 4.26
1663 3417 3.545426 CGACGACTTCATCACGCTATACA 60.545 47.826 0.00 0.00 0.00 2.29
1770 3524 2.183300 GCGCACCGGATCACACTA 59.817 61.111 9.46 0.00 0.00 2.74
1803 3557 6.039717 TCAAGGAAACAGATTGGTTCAAGAAG 59.960 38.462 8.89 0.00 45.53 2.85
1812 3566 2.586425 TGGTTCAAGAAGGGCTTCAAG 58.414 47.619 0.00 0.00 41.84 3.02
1816 3570 3.593442 TCAAGAAGGGCTTCAAGGAAA 57.407 42.857 0.00 0.00 41.84 3.13
1818 3572 5.255397 TCAAGAAGGGCTTCAAGGAAATA 57.745 39.130 0.00 0.00 41.84 1.40
1827 3581 7.414266 AGGGCTTCAAGGAAATAAGTTTCTAT 58.586 34.615 1.50 0.00 42.66 1.98
1944 3698 2.440430 TCCGGCTCTTCCTCTCCG 60.440 66.667 0.00 0.00 41.41 4.63
1959 3713 4.552365 CCGGTGGCTCATGGCGAT 62.552 66.667 0.00 0.00 42.94 4.58
2032 3786 2.599281 TGCACATTGCTGCAGCCT 60.599 55.556 34.64 19.99 45.31 4.58
2085 3839 2.597305 GAGTATGAACGCGTTCGACATT 59.403 45.455 37.07 26.60 42.28 2.71
2182 3936 1.825090 GCCAGTGAACACCATCATCA 58.175 50.000 1.11 0.00 0.00 3.07
2183 3937 2.161855 GCCAGTGAACACCATCATCAA 58.838 47.619 1.11 0.00 0.00 2.57
2331 4085 2.579201 CCGGAGCTCGTCATGGTT 59.421 61.111 7.83 0.00 37.11 3.67
2355 4109 2.565841 GTATGCAAGAAAGCCGGAGAT 58.434 47.619 5.05 0.00 0.00 2.75
2497 4257 2.653115 GGTGAAAAGCAGCAGGGC 59.347 61.111 0.00 0.00 44.31 5.19
2504 4264 4.858994 AGCAGCAGGGCTTGATTT 57.141 50.000 0.00 0.00 42.71 2.17
2589 4349 2.065993 GGTGGATCACCGATGTATCG 57.934 55.000 7.27 7.27 44.95 2.92
2614 4376 5.296780 ACATTGAGTTCCAAGTGTTGTGTAG 59.703 40.000 0.00 0.00 38.31 2.74
2619 4381 2.833794 TCCAAGTGTTGTGTAGTCTGC 58.166 47.619 0.00 0.00 0.00 4.26
2627 4389 4.988540 GTGTTGTGTAGTCTGCACATTAGA 59.011 41.667 22.29 6.82 44.91 2.10
2628 4390 5.465390 GTGTTGTGTAGTCTGCACATTAGAA 59.535 40.000 22.29 6.46 44.91 2.10
2631 4393 7.066404 TGTTGTGTAGTCTGCACATTAGAAAAA 59.934 33.333 22.29 4.42 44.91 1.94
2732 4496 9.889128 TGAAACATCTACACATAATTCATCTCA 57.111 29.630 0.00 0.00 0.00 3.27
2781 4550 3.504906 AGCATCAATATGGCATCTTTCCG 59.495 43.478 1.65 0.00 33.38 4.30
2783 4552 4.455533 GCATCAATATGGCATCTTTCCGTA 59.544 41.667 1.65 0.00 33.38 4.02
2861 4631 6.698008 TTAACTATGGATCTTGTTGGCATG 57.302 37.500 0.00 0.00 0.00 4.06
2863 4633 2.832643 ATGGATCTTGTTGGCATGGA 57.167 45.000 0.00 0.00 0.00 3.41
2864 4634 2.133281 TGGATCTTGTTGGCATGGAG 57.867 50.000 0.00 0.00 0.00 3.86
2886 4658 6.071728 GGAGTTTCAATCTTGGAATCACATGT 60.072 38.462 0.00 0.00 0.00 3.21
2918 4693 7.770897 CCTAGCACTCAAGGTAGTTTGATAAAT 59.229 37.037 0.00 0.00 37.78 1.40
2951 4726 4.709397 AGGTGAAACTGTGGAATGTCAAAA 59.291 37.500 0.00 0.00 36.74 2.44
3064 4841 4.347607 ACAATCATCTTCCCCTTTTGGAG 58.652 43.478 0.00 0.00 44.07 3.86
3159 4936 0.034670 AGAGGGGAATCACAAGCAGC 60.035 55.000 0.00 0.00 0.00 5.25
3161 4938 0.333993 AGGGGAATCACAAGCAGCAT 59.666 50.000 0.00 0.00 0.00 3.79
3172 4949 1.605710 CAAGCAGCATACCATAGCACC 59.394 52.381 0.00 0.00 0.00 5.01
3180 4957 3.054434 GCATACCATAGCACCATGGGATA 60.054 47.826 18.09 8.65 46.26 2.59
3195 4972 4.524802 TGGGATATGTGCCAGAGATTTT 57.475 40.909 0.00 0.00 41.40 1.82
3196 4973 4.870636 TGGGATATGTGCCAGAGATTTTT 58.129 39.130 0.00 0.00 41.40 1.94
3231 5011 3.577649 GCTACCTTGCAGCTATCGATA 57.422 47.619 4.78 4.78 36.07 2.92
3267 5047 3.981071 TCTCATCCGTGAAAGGTGAAT 57.019 42.857 0.00 0.00 33.05 2.57
3271 5051 3.054434 TCATCCGTGAAAGGTGAATCCAT 60.054 43.478 0.00 0.00 39.02 3.41
3290 5070 5.431765 TCCATAACCTCTCTGCAATCTTTC 58.568 41.667 0.00 0.00 0.00 2.62
3292 5072 3.795688 AACCTCTCTGCAATCTTTCCA 57.204 42.857 0.00 0.00 0.00 3.53
3350 5130 0.323360 ACCATACACTTGCGGCCATT 60.323 50.000 2.24 0.00 0.00 3.16
3384 5164 6.378280 ACCATTCTTTGTTCTCTTCAACTTGT 59.622 34.615 0.00 0.00 0.00 3.16
3415 5195 3.873952 GACAGTGGTCCTTTGCTGATATC 59.126 47.826 0.00 0.00 38.12 1.63
3420 5200 3.055458 TGGTCCTTTGCTGATATCGACAA 60.055 43.478 6.21 6.21 0.00 3.18
3462 5242 6.811253 TGTTACTTCAGACAAAACAACAGT 57.189 33.333 0.00 0.00 0.00 3.55
3463 5243 6.607689 TGTTACTTCAGACAAAACAACAGTG 58.392 36.000 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.616317 GCCCAGTGTCAGTTGTTGTTTTT 60.616 43.478 0.00 0.00 0.00 1.94
5 6 2.094234 GCCCAGTGTCAGTTGTTGTTTT 60.094 45.455 0.00 0.00 0.00 2.43
6 7 1.476488 GCCCAGTGTCAGTTGTTGTTT 59.524 47.619 0.00 0.00 0.00 2.83
7 8 1.102978 GCCCAGTGTCAGTTGTTGTT 58.897 50.000 0.00 0.00 0.00 2.83
8 9 0.034574 TGCCCAGTGTCAGTTGTTGT 60.035 50.000 0.00 0.00 0.00 3.32
9 10 0.381801 GTGCCCAGTGTCAGTTGTTG 59.618 55.000 0.00 0.00 0.00 3.33
10 11 0.255890 AGTGCCCAGTGTCAGTTGTT 59.744 50.000 0.00 0.00 0.00 2.83
11 12 1.128200 TAGTGCCCAGTGTCAGTTGT 58.872 50.000 0.00 0.00 0.00 3.32
12 13 2.146342 CTTAGTGCCCAGTGTCAGTTG 58.854 52.381 0.00 0.00 0.00 3.16
13 14 1.768870 ACTTAGTGCCCAGTGTCAGTT 59.231 47.619 0.00 0.00 0.00 3.16
14 15 1.424638 ACTTAGTGCCCAGTGTCAGT 58.575 50.000 0.00 0.00 0.00 3.41
15 16 2.550830 AACTTAGTGCCCAGTGTCAG 57.449 50.000 0.00 0.00 0.00 3.51
16 17 4.634012 ATTAACTTAGTGCCCAGTGTCA 57.366 40.909 0.00 0.00 0.00 3.58
17 18 5.116882 CCTATTAACTTAGTGCCCAGTGTC 58.883 45.833 0.00 0.00 0.00 3.67
18 19 4.534897 ACCTATTAACTTAGTGCCCAGTGT 59.465 41.667 0.00 0.00 0.00 3.55
19 20 5.099042 ACCTATTAACTTAGTGCCCAGTG 57.901 43.478 0.00 0.00 0.00 3.66
20 21 5.774102 AACCTATTAACTTAGTGCCCAGT 57.226 39.130 0.00 0.00 0.00 4.00
21 22 6.885922 ACTAACCTATTAACTTAGTGCCCAG 58.114 40.000 0.00 0.00 31.01 4.45
22 23 6.670902 AGACTAACCTATTAACTTAGTGCCCA 59.329 38.462 0.00 0.00 32.10 5.36
23 24 7.122138 AGACTAACCTATTAACTTAGTGCCC 57.878 40.000 0.00 0.00 32.10 5.36
24 25 7.779073 TGAGACTAACCTATTAACTTAGTGCC 58.221 38.462 0.00 0.00 32.10 5.01
25 26 9.303537 CTTGAGACTAACCTATTAACTTAGTGC 57.696 37.037 0.00 0.00 32.10 4.40
135 136 8.812972 GGGTAGTGTTGATATGTCTCCAATATA 58.187 37.037 0.00 0.00 0.00 0.86
136 137 7.256691 GGGGTAGTGTTGATATGTCTCCAATAT 60.257 40.741 0.00 0.00 0.00 1.28
137 138 6.042781 GGGGTAGTGTTGATATGTCTCCAATA 59.957 42.308 0.00 0.00 0.00 1.90
138 139 5.163195 GGGGTAGTGTTGATATGTCTCCAAT 60.163 44.000 0.00 0.00 0.00 3.16
139 140 4.163458 GGGGTAGTGTTGATATGTCTCCAA 59.837 45.833 0.00 0.00 0.00 3.53
140 141 3.709653 GGGGTAGTGTTGATATGTCTCCA 59.290 47.826 0.00 0.00 0.00 3.86
141 142 3.967987 AGGGGTAGTGTTGATATGTCTCC 59.032 47.826 0.00 0.00 0.00 3.71
142 143 5.615925 AAGGGGTAGTGTTGATATGTCTC 57.384 43.478 0.00 0.00 0.00 3.36
143 144 6.901300 TCTAAAGGGGTAGTGTTGATATGTCT 59.099 38.462 0.00 0.00 0.00 3.41
144 145 7.120923 TCTAAAGGGGTAGTGTTGATATGTC 57.879 40.000 0.00 0.00 0.00 3.06
145 146 7.569111 AGATCTAAAGGGGTAGTGTTGATATGT 59.431 37.037 0.00 0.00 0.00 2.29
146 147 7.967908 AGATCTAAAGGGGTAGTGTTGATATG 58.032 38.462 0.00 0.00 0.00 1.78
147 148 8.568617 AAGATCTAAAGGGGTAGTGTTGATAT 57.431 34.615 0.00 0.00 0.00 1.63
148 149 7.989947 AAGATCTAAAGGGGTAGTGTTGATA 57.010 36.000 0.00 0.00 0.00 2.15
149 150 6.893020 AAGATCTAAAGGGGTAGTGTTGAT 57.107 37.500 0.00 0.00 0.00 2.57
150 151 7.801893 TTAAGATCTAAAGGGGTAGTGTTGA 57.198 36.000 0.00 0.00 0.00 3.18
151 152 7.012421 GCATTAAGATCTAAAGGGGTAGTGTTG 59.988 40.741 0.00 0.00 0.00 3.33
152 153 7.054751 GCATTAAGATCTAAAGGGGTAGTGTT 58.945 38.462 0.00 0.00 0.00 3.32
153 154 6.387220 AGCATTAAGATCTAAAGGGGTAGTGT 59.613 38.462 0.00 0.00 0.00 3.55
154 155 6.831976 AGCATTAAGATCTAAAGGGGTAGTG 58.168 40.000 0.00 0.00 0.00 2.74
155 156 7.453141 AAGCATTAAGATCTAAAGGGGTAGT 57.547 36.000 0.00 0.00 0.00 2.73
156 157 7.445707 GGAAAGCATTAAGATCTAAAGGGGTAG 59.554 40.741 0.00 0.00 0.00 3.18
157 158 7.287810 GGAAAGCATTAAGATCTAAAGGGGTA 58.712 38.462 0.00 0.00 0.00 3.69
158 159 6.129874 GGAAAGCATTAAGATCTAAAGGGGT 58.870 40.000 0.00 0.00 0.00 4.95
159 160 5.239525 CGGAAAGCATTAAGATCTAAAGGGG 59.760 44.000 0.00 0.00 0.00 4.79
160 161 5.823045 ACGGAAAGCATTAAGATCTAAAGGG 59.177 40.000 0.00 0.00 0.00 3.95
161 162 6.238484 CCACGGAAAGCATTAAGATCTAAAGG 60.238 42.308 0.00 0.00 0.00 3.11
162 163 6.538742 TCCACGGAAAGCATTAAGATCTAAAG 59.461 38.462 0.00 0.00 0.00 1.85
163 164 6.315393 GTCCACGGAAAGCATTAAGATCTAAA 59.685 38.462 0.00 0.00 0.00 1.85
164 165 5.815740 GTCCACGGAAAGCATTAAGATCTAA 59.184 40.000 0.00 0.00 0.00 2.10
165 166 5.357257 GTCCACGGAAAGCATTAAGATCTA 58.643 41.667 0.00 0.00 0.00 1.98
166 167 4.192317 GTCCACGGAAAGCATTAAGATCT 58.808 43.478 0.00 0.00 0.00 2.75
167 168 3.312697 GGTCCACGGAAAGCATTAAGATC 59.687 47.826 0.00 0.00 0.00 2.75
168 169 3.279434 GGTCCACGGAAAGCATTAAGAT 58.721 45.455 0.00 0.00 0.00 2.40
169 170 2.617021 GGGTCCACGGAAAGCATTAAGA 60.617 50.000 0.00 0.00 0.00 2.10
170 171 1.743394 GGGTCCACGGAAAGCATTAAG 59.257 52.381 0.00 0.00 0.00 1.85
171 172 1.074084 TGGGTCCACGGAAAGCATTAA 59.926 47.619 0.00 0.00 0.00 1.40
172 173 0.693622 TGGGTCCACGGAAAGCATTA 59.306 50.000 0.00 0.00 0.00 1.90
173 174 0.178975 TTGGGTCCACGGAAAGCATT 60.179 50.000 0.00 0.00 0.00 3.56
174 175 0.609131 CTTGGGTCCACGGAAAGCAT 60.609 55.000 0.00 0.00 0.00 3.79
175 176 1.228124 CTTGGGTCCACGGAAAGCA 60.228 57.895 0.00 0.00 0.00 3.91
176 177 2.626780 GCTTGGGTCCACGGAAAGC 61.627 63.158 5.47 5.47 36.78 3.51
177 178 0.323629 TAGCTTGGGTCCACGGAAAG 59.676 55.000 0.00 0.00 0.00 2.62
178 179 0.988832 ATAGCTTGGGTCCACGGAAA 59.011 50.000 0.00 0.00 0.00 3.13
179 180 0.988832 AATAGCTTGGGTCCACGGAA 59.011 50.000 0.00 0.00 0.00 4.30
180 181 1.868713 TAATAGCTTGGGTCCACGGA 58.131 50.000 0.00 0.00 0.00 4.69
181 182 2.550208 GGATAATAGCTTGGGTCCACGG 60.550 54.545 0.00 0.00 0.00 4.94
182 183 2.368875 AGGATAATAGCTTGGGTCCACG 59.631 50.000 0.00 0.00 0.00 4.94
183 184 4.103311 AGAAGGATAATAGCTTGGGTCCAC 59.897 45.833 0.00 0.00 0.00 4.02
184 185 4.307259 AGAAGGATAATAGCTTGGGTCCA 58.693 43.478 0.00 0.00 0.00 4.02
185 186 4.984146 AGAAGGATAATAGCTTGGGTCC 57.016 45.455 0.00 0.00 0.00 4.46
186 187 4.991687 CGAAGAAGGATAATAGCTTGGGTC 59.008 45.833 0.00 0.00 0.00 4.46
187 188 4.409247 ACGAAGAAGGATAATAGCTTGGGT 59.591 41.667 0.00 0.00 0.00 4.51
188 189 4.962155 ACGAAGAAGGATAATAGCTTGGG 58.038 43.478 0.00 0.00 0.00 4.12
189 190 4.991687 GGACGAAGAAGGATAATAGCTTGG 59.008 45.833 0.00 0.00 0.00 3.61
190 191 5.601662 TGGACGAAGAAGGATAATAGCTTG 58.398 41.667 0.00 0.00 0.00 4.01
191 192 5.871396 TGGACGAAGAAGGATAATAGCTT 57.129 39.130 0.00 0.00 0.00 3.74
192 193 5.871396 TTGGACGAAGAAGGATAATAGCT 57.129 39.130 0.00 0.00 0.00 3.32
193 194 5.639931 GGATTGGACGAAGAAGGATAATAGC 59.360 44.000 0.00 0.00 0.00 2.97
194 195 5.864474 CGGATTGGACGAAGAAGGATAATAG 59.136 44.000 0.00 0.00 0.00 1.73
195 196 5.537295 TCGGATTGGACGAAGAAGGATAATA 59.463 40.000 0.00 0.00 37.42 0.98
196 197 4.344102 TCGGATTGGACGAAGAAGGATAAT 59.656 41.667 0.00 0.00 37.42 1.28
197 198 3.702548 TCGGATTGGACGAAGAAGGATAA 59.297 43.478 0.00 0.00 37.42 1.75
198 199 3.067742 GTCGGATTGGACGAAGAAGGATA 59.932 47.826 0.00 0.00 42.55 2.59
199 200 2.108168 TCGGATTGGACGAAGAAGGAT 58.892 47.619 0.00 0.00 37.42 3.24
200 201 1.203994 GTCGGATTGGACGAAGAAGGA 59.796 52.381 0.00 0.00 42.55 3.36
201 202 1.067142 TGTCGGATTGGACGAAGAAGG 60.067 52.381 0.00 0.00 42.55 3.46
202 203 2.363788 TGTCGGATTGGACGAAGAAG 57.636 50.000 0.00 0.00 42.55 2.85
203 204 2.036733 AGTTGTCGGATTGGACGAAGAA 59.963 45.455 0.00 0.00 42.55 2.52
204 205 1.616865 AGTTGTCGGATTGGACGAAGA 59.383 47.619 0.00 0.00 42.55 2.87
205 206 2.080286 AGTTGTCGGATTGGACGAAG 57.920 50.000 0.00 0.00 42.55 3.79
206 207 2.536761 AAGTTGTCGGATTGGACGAA 57.463 45.000 0.00 0.00 42.55 3.85
207 208 2.036733 AGAAAGTTGTCGGATTGGACGA 59.963 45.455 0.00 0.00 39.83 4.20
208 209 2.412089 GAGAAAGTTGTCGGATTGGACG 59.588 50.000 0.00 0.00 39.83 4.79
209 210 3.665190 AGAGAAAGTTGTCGGATTGGAC 58.335 45.455 0.00 0.00 37.45 4.02
210 211 4.351874 AAGAGAAAGTTGTCGGATTGGA 57.648 40.909 0.00 0.00 0.00 3.53
211 212 4.377431 CGAAAGAGAAAGTTGTCGGATTGG 60.377 45.833 0.00 0.00 0.00 3.16
212 213 4.447724 TCGAAAGAGAAAGTTGTCGGATTG 59.552 41.667 0.00 0.00 34.84 2.67
213 214 4.628074 TCGAAAGAGAAAGTTGTCGGATT 58.372 39.130 0.00 0.00 34.84 3.01
214 215 4.252971 TCGAAAGAGAAAGTTGTCGGAT 57.747 40.909 0.00 0.00 34.84 4.18
215 216 3.720949 TCGAAAGAGAAAGTTGTCGGA 57.279 42.857 0.00 0.00 34.84 4.55
228 229 2.654877 GACCGGGCACTCGAAAGA 59.345 61.111 0.00 0.00 39.12 2.52
229 230 2.434359 GGACCGGGCACTCGAAAG 60.434 66.667 11.00 0.00 0.00 2.62
230 231 2.119484 AATGGACCGGGCACTCGAAA 62.119 55.000 11.00 0.00 0.00 3.46
231 232 2.589157 AATGGACCGGGCACTCGAA 61.589 57.895 11.00 0.00 0.00 3.71
232 233 3.000819 AATGGACCGGGCACTCGA 61.001 61.111 11.00 0.00 0.00 4.04
233 234 2.819595 CAATGGACCGGGCACTCG 60.820 66.667 11.00 0.00 0.00 4.18
234 235 2.438434 CCAATGGACCGGGCACTC 60.438 66.667 11.00 0.00 0.00 3.51
235 236 4.740822 GCCAATGGACCGGGCACT 62.741 66.667 11.00 0.00 46.92 4.40
239 240 1.825191 CTGATGCCAATGGACCGGG 60.825 63.158 6.32 0.00 0.00 5.73
240 241 2.484062 GCTGATGCCAATGGACCGG 61.484 63.158 2.05 0.00 0.00 5.28
241 242 2.827051 CGCTGATGCCAATGGACCG 61.827 63.158 2.05 0.00 35.36 4.79
242 243 2.484062 CCGCTGATGCCAATGGACC 61.484 63.158 2.05 0.00 35.36 4.46
243 244 0.463654 TACCGCTGATGCCAATGGAC 60.464 55.000 2.05 0.00 35.36 4.02
244 245 0.254462 TTACCGCTGATGCCAATGGA 59.746 50.000 2.05 0.00 35.36 3.41
245 246 1.267806 GATTACCGCTGATGCCAATGG 59.732 52.381 0.00 0.00 35.36 3.16
246 247 2.031420 CAGATTACCGCTGATGCCAATG 60.031 50.000 0.00 0.00 35.39 2.82
247 248 2.224606 CAGATTACCGCTGATGCCAAT 58.775 47.619 0.00 0.00 35.39 3.16
248 249 1.667236 CAGATTACCGCTGATGCCAA 58.333 50.000 0.00 0.00 35.39 4.52
249 250 0.815213 GCAGATTACCGCTGATGCCA 60.815 55.000 0.00 0.00 35.39 4.92
250 251 0.533755 AGCAGATTACCGCTGATGCC 60.534 55.000 0.00 0.00 37.02 4.40
251 252 1.303309 AAGCAGATTACCGCTGATGC 58.697 50.000 0.00 0.00 38.82 3.91
252 253 3.496130 CCTAAAGCAGATTACCGCTGATG 59.504 47.826 0.00 0.00 38.82 3.07
253 254 3.134804 ACCTAAAGCAGATTACCGCTGAT 59.865 43.478 0.00 0.00 38.82 2.90
254 255 2.500098 ACCTAAAGCAGATTACCGCTGA 59.500 45.455 0.00 0.00 38.82 4.26
255 256 2.609459 CACCTAAAGCAGATTACCGCTG 59.391 50.000 0.00 0.00 38.82 5.18
256 257 2.420129 CCACCTAAAGCAGATTACCGCT 60.420 50.000 0.00 0.00 41.20 5.52
257 258 1.940613 CCACCTAAAGCAGATTACCGC 59.059 52.381 0.00 0.00 0.00 5.68
258 259 3.118738 ACTCCACCTAAAGCAGATTACCG 60.119 47.826 0.00 0.00 0.00 4.02
259 260 4.489306 ACTCCACCTAAAGCAGATTACC 57.511 45.455 0.00 0.00 0.00 2.85
260 261 6.223351 ACTACTCCACCTAAAGCAGATTAC 57.777 41.667 0.00 0.00 0.00 1.89
261 262 5.067413 CGACTACTCCACCTAAAGCAGATTA 59.933 44.000 0.00 0.00 0.00 1.75
262 263 4.142138 CGACTACTCCACCTAAAGCAGATT 60.142 45.833 0.00 0.00 0.00 2.40
263 264 3.381908 CGACTACTCCACCTAAAGCAGAT 59.618 47.826 0.00 0.00 0.00 2.90
264 265 2.753452 CGACTACTCCACCTAAAGCAGA 59.247 50.000 0.00 0.00 0.00 4.26
265 266 2.753452 TCGACTACTCCACCTAAAGCAG 59.247 50.000 0.00 0.00 0.00 4.24
266 267 2.799017 TCGACTACTCCACCTAAAGCA 58.201 47.619 0.00 0.00 0.00 3.91
267 268 3.380637 TCATCGACTACTCCACCTAAAGC 59.619 47.826 0.00 0.00 0.00 3.51
268 269 4.398358 TGTCATCGACTACTCCACCTAAAG 59.602 45.833 0.00 0.00 33.15 1.85
269 270 4.338012 TGTCATCGACTACTCCACCTAAA 58.662 43.478 0.00 0.00 33.15 1.85
270 271 3.959293 TGTCATCGACTACTCCACCTAA 58.041 45.455 0.00 0.00 33.15 2.69
271 272 3.639672 TGTCATCGACTACTCCACCTA 57.360 47.619 0.00 0.00 33.15 3.08
272 273 2.509166 TGTCATCGACTACTCCACCT 57.491 50.000 0.00 0.00 33.15 4.00
273 274 2.427453 ACATGTCATCGACTACTCCACC 59.573 50.000 0.00 0.00 33.15 4.61
274 275 3.128764 TGACATGTCATCGACTACTCCAC 59.871 47.826 24.56 0.00 34.14 4.02
275 276 3.352648 TGACATGTCATCGACTACTCCA 58.647 45.455 24.56 0.00 34.14 3.86
276 277 4.371855 TTGACATGTCATCGACTACTCC 57.628 45.455 28.32 0.00 39.64 3.85
277 278 5.807520 ACATTTGACATGTCATCGACTACTC 59.192 40.000 28.32 0.00 39.64 2.59
278 279 5.578336 CACATTTGACATGTCATCGACTACT 59.422 40.000 28.32 4.76 39.64 2.57
279 280 5.725042 GCACATTTGACATGTCATCGACTAC 60.725 44.000 28.32 12.32 39.64 2.73
280 281 4.329801 GCACATTTGACATGTCATCGACTA 59.670 41.667 28.32 10.41 39.64 2.59
281 282 3.125829 GCACATTTGACATGTCATCGACT 59.874 43.478 28.32 6.22 39.64 4.18
282 283 3.419915 GCACATTTGACATGTCATCGAC 58.580 45.455 28.32 12.72 39.64 4.20
283 284 2.419673 GGCACATTTGACATGTCATCGA 59.580 45.455 28.32 17.48 39.64 3.59
284 285 2.421073 AGGCACATTTGACATGTCATCG 59.579 45.455 28.32 20.47 39.64 3.84
285 286 4.171005 CAAGGCACATTTGACATGTCATC 58.829 43.478 28.32 13.06 39.64 2.92
286 287 3.575256 ACAAGGCACATTTGACATGTCAT 59.425 39.130 28.32 12.72 39.64 3.06
287 288 2.957680 ACAAGGCACATTTGACATGTCA 59.042 40.909 24.56 24.56 37.91 3.58
288 289 3.648339 ACAAGGCACATTTGACATGTC 57.352 42.857 19.27 19.27 30.07 3.06
289 290 3.243839 GGAACAAGGCACATTTGACATGT 60.244 43.478 0.00 0.00 30.07 3.21
290 291 3.006110 AGGAACAAGGCACATTTGACATG 59.994 43.478 0.00 0.00 30.07 3.21
291 292 3.233507 AGGAACAAGGCACATTTGACAT 58.766 40.909 0.00 0.00 30.07 3.06
292 293 2.622942 GAGGAACAAGGCACATTTGACA 59.377 45.455 0.00 0.00 30.07 3.58
293 294 2.887152 AGAGGAACAAGGCACATTTGAC 59.113 45.455 0.00 0.00 0.00 3.18
294 295 3.149196 GAGAGGAACAAGGCACATTTGA 58.851 45.455 0.00 0.00 0.00 2.69
295 296 2.229784 GGAGAGGAACAAGGCACATTTG 59.770 50.000 0.00 0.00 0.00 2.32
296 297 2.108952 AGGAGAGGAACAAGGCACATTT 59.891 45.455 0.00 0.00 0.00 2.32
297 298 1.707427 AGGAGAGGAACAAGGCACATT 59.293 47.619 0.00 0.00 0.00 2.71
298 299 1.366319 AGGAGAGGAACAAGGCACAT 58.634 50.000 0.00 0.00 0.00 3.21
299 300 2.024176 TAGGAGAGGAACAAGGCACA 57.976 50.000 0.00 0.00 0.00 4.57
300 301 2.420687 CCATAGGAGAGGAACAAGGCAC 60.421 54.545 0.00 0.00 0.00 5.01
301 302 1.839994 CCATAGGAGAGGAACAAGGCA 59.160 52.381 0.00 0.00 0.00 4.75
302 303 1.475930 GCCATAGGAGAGGAACAAGGC 60.476 57.143 0.00 0.00 0.00 4.35
303 304 2.122768 AGCCATAGGAGAGGAACAAGG 58.877 52.381 0.00 0.00 0.00 3.61
304 305 2.744494 GCAGCCATAGGAGAGGAACAAG 60.744 54.545 0.00 0.00 0.00 3.16
305 306 1.210478 GCAGCCATAGGAGAGGAACAA 59.790 52.381 0.00 0.00 0.00 2.83
306 307 0.833287 GCAGCCATAGGAGAGGAACA 59.167 55.000 0.00 0.00 0.00 3.18
307 308 0.107643 GGCAGCCATAGGAGAGGAAC 59.892 60.000 6.55 0.00 0.00 3.62
308 309 0.030705 AGGCAGCCATAGGAGAGGAA 60.031 55.000 15.80 0.00 0.00 3.36
309 310 0.030705 AAGGCAGCCATAGGAGAGGA 60.031 55.000 15.80 0.00 0.00 3.71
310 311 0.842635 AAAGGCAGCCATAGGAGAGG 59.157 55.000 15.80 0.00 0.00 3.69
311 312 1.539929 CGAAAGGCAGCCATAGGAGAG 60.540 57.143 15.80 0.00 0.00 3.20
312 313 0.465705 CGAAAGGCAGCCATAGGAGA 59.534 55.000 15.80 0.00 0.00 3.71
313 314 2.997899 CGAAAGGCAGCCATAGGAG 58.002 57.895 15.80 0.00 0.00 3.69
325 326 2.087009 GACGAGTGTCGCCGAAAGG 61.087 63.158 0.00 0.00 45.12 3.11
326 327 2.087009 GGACGAGTGTCGCCGAAAG 61.087 63.158 0.00 0.00 46.49 2.62
327 328 2.049802 GGACGAGTGTCGCCGAAA 60.050 61.111 0.00 0.00 46.49 3.46
328 329 3.263503 CTGGACGAGTGTCGCCGAA 62.264 63.158 0.00 0.00 46.49 4.30
329 330 3.733960 CTGGACGAGTGTCGCCGA 61.734 66.667 0.00 0.00 46.49 5.54
330 331 4.778415 CCTGGACGAGTGTCGCCG 62.778 72.222 0.00 0.00 46.49 6.46
331 332 3.222354 AACCTGGACGAGTGTCGCC 62.222 63.158 0.00 0.00 46.49 5.54
332 333 1.733399 GAACCTGGACGAGTGTCGC 60.733 63.158 0.00 0.00 46.49 5.19
333 334 1.130749 CTAGAACCTGGACGAGTGTCG 59.869 57.143 0.00 0.00 46.49 4.35
334 335 1.473278 CCTAGAACCTGGACGAGTGTC 59.527 57.143 0.00 0.00 44.72 3.67
335 336 1.546961 CCTAGAACCTGGACGAGTGT 58.453 55.000 0.00 0.00 0.00 3.55
336 337 0.818296 CCCTAGAACCTGGACGAGTG 59.182 60.000 0.00 0.00 0.00 3.51
337 338 0.408700 ACCCTAGAACCTGGACGAGT 59.591 55.000 0.00 0.00 0.00 4.18
338 339 0.818296 CACCCTAGAACCTGGACGAG 59.182 60.000 0.00 0.00 0.00 4.18
339 340 0.406750 TCACCCTAGAACCTGGACGA 59.593 55.000 0.00 0.00 0.00 4.20
340 341 1.067071 GTTCACCCTAGAACCTGGACG 60.067 57.143 0.00 0.00 41.52 4.79
341 342 1.975680 TGTTCACCCTAGAACCTGGAC 59.024 52.381 0.00 0.00 45.62 4.02
342 343 2.409064 TGTTCACCCTAGAACCTGGA 57.591 50.000 0.00 0.00 45.62 3.86
343 344 2.305927 ACATGTTCACCCTAGAACCTGG 59.694 50.000 13.77 0.00 45.62 4.45
344 345 3.600388 GACATGTTCACCCTAGAACCTG 58.400 50.000 0.00 9.51 45.62 4.00
345 346 2.572104 GGACATGTTCACCCTAGAACCT 59.428 50.000 0.00 0.00 45.62 3.50
346 347 2.304761 TGGACATGTTCACCCTAGAACC 59.695 50.000 1.52 0.00 45.62 3.62
347 348 3.695830 TGGACATGTTCACCCTAGAAC 57.304 47.619 1.52 0.00 46.22 3.01
348 349 4.104086 AGATGGACATGTTCACCCTAGAA 58.896 43.478 9.59 0.00 0.00 2.10
349 350 3.724478 AGATGGACATGTTCACCCTAGA 58.276 45.455 9.59 0.00 0.00 2.43
350 351 5.305386 TCATAGATGGACATGTTCACCCTAG 59.695 44.000 9.59 8.24 0.00 3.02
351 352 5.070446 GTCATAGATGGACATGTTCACCCTA 59.930 44.000 9.59 13.89 35.36 3.53
352 353 4.040047 TCATAGATGGACATGTTCACCCT 58.960 43.478 9.59 12.10 0.00 4.34
353 354 4.130118 GTCATAGATGGACATGTTCACCC 58.870 47.826 9.59 4.56 35.36 4.61
354 355 3.804325 CGTCATAGATGGACATGTTCACC 59.196 47.826 9.59 0.00 34.97 4.02
355 356 3.804325 CCGTCATAGATGGACATGTTCAC 59.196 47.826 9.59 3.80 40.94 3.18
356 357 3.450817 ACCGTCATAGATGGACATGTTCA 59.549 43.478 9.85 9.85 40.94 3.18
357 358 3.804325 CACCGTCATAGATGGACATGTTC 59.196 47.826 11.99 0.00 40.94 3.18
358 359 3.797039 CACCGTCATAGATGGACATGTT 58.203 45.455 11.99 0.00 40.94 2.71
359 360 2.483714 GCACCGTCATAGATGGACATGT 60.484 50.000 11.99 0.00 40.94 3.21
360 361 2.138320 GCACCGTCATAGATGGACATG 58.862 52.381 11.99 0.00 40.94 3.21
361 362 1.762370 TGCACCGTCATAGATGGACAT 59.238 47.619 11.99 0.00 40.94 3.06
362 363 1.190643 TGCACCGTCATAGATGGACA 58.809 50.000 11.99 6.90 40.94 4.02
363 364 2.408050 GATGCACCGTCATAGATGGAC 58.592 52.381 11.99 4.58 40.94 4.02
364 365 1.000274 CGATGCACCGTCATAGATGGA 60.000 52.381 11.99 0.00 40.94 3.41
365 366 1.422388 CGATGCACCGTCATAGATGG 58.578 55.000 0.00 3.77 43.80 3.51
366 367 0.786581 GCGATGCACCGTCATAGATG 59.213 55.000 0.57 0.00 0.00 2.90
367 368 0.319900 GGCGATGCACCGTCATAGAT 60.320 55.000 0.00 0.00 33.83 1.98
368 369 1.067416 GGCGATGCACCGTCATAGA 59.933 57.895 0.00 0.00 33.83 1.98
369 370 0.530650 AAGGCGATGCACCGTCATAG 60.531 55.000 8.30 0.00 36.49 2.23
370 371 0.107897 AAAGGCGATGCACCGTCATA 60.108 50.000 8.30 0.00 36.49 2.15
371 372 1.369091 GAAAGGCGATGCACCGTCAT 61.369 55.000 8.30 0.00 36.49 3.06
372 373 2.031919 AAAGGCGATGCACCGTCA 59.968 55.556 8.30 0.00 36.49 4.35
373 374 2.785258 GAAAGGCGATGCACCGTC 59.215 61.111 0.00 0.00 0.00 4.79
374 375 3.118454 CGAAAGGCGATGCACCGT 61.118 61.111 0.57 0.00 44.57 4.83
375 376 2.813474 TCGAAAGGCGATGCACCG 60.813 61.111 0.00 0.00 45.59 4.94
385 386 2.510238 CTCGCCTGGCTCGAAAGG 60.510 66.667 17.92 0.00 35.38 3.11
386 387 2.510238 CCTCGCCTGGCTCGAAAG 60.510 66.667 17.92 6.07 35.38 2.62
387 388 2.994995 TCCTCGCCTGGCTCGAAA 60.995 61.111 17.92 0.00 35.38 3.46
388 389 3.452786 CTCCTCGCCTGGCTCGAA 61.453 66.667 17.92 0.00 35.38 3.71
394 395 4.463879 CACTGCCTCCTCGCCTGG 62.464 72.222 0.00 0.00 0.00 4.45
395 396 4.463879 CCACTGCCTCCTCGCCTG 62.464 72.222 0.00 0.00 0.00 4.85
406 407 0.884704 TTGTCGAAGAAGGCCACTGC 60.885 55.000 5.01 1.02 39.69 4.40
407 408 1.466167 CATTGTCGAAGAAGGCCACTG 59.534 52.381 5.01 0.00 39.69 3.66
408 409 1.611673 CCATTGTCGAAGAAGGCCACT 60.612 52.381 5.01 0.00 39.69 4.00
409 410 0.804989 CCATTGTCGAAGAAGGCCAC 59.195 55.000 5.01 0.00 39.69 5.01
410 411 0.690192 TCCATTGTCGAAGAAGGCCA 59.310 50.000 5.01 0.00 39.69 5.36
411 412 1.943340 GATCCATTGTCGAAGAAGGCC 59.057 52.381 0.00 0.00 39.69 5.19
412 413 2.611292 CAGATCCATTGTCGAAGAAGGC 59.389 50.000 0.00 0.00 39.69 4.35
413 414 3.118629 TCCAGATCCATTGTCGAAGAAGG 60.119 47.826 0.00 0.00 39.69 3.46
414 415 4.128925 TCCAGATCCATTGTCGAAGAAG 57.871 45.455 0.00 0.00 39.69 2.85
415 416 4.445453 CATCCAGATCCATTGTCGAAGAA 58.555 43.478 0.00 0.00 39.69 2.52
416 417 3.181462 CCATCCAGATCCATTGTCGAAGA 60.181 47.826 0.00 0.00 0.00 2.87
417 418 3.136763 CCATCCAGATCCATTGTCGAAG 58.863 50.000 0.00 0.00 0.00 3.79
418 419 2.505407 ACCATCCAGATCCATTGTCGAA 59.495 45.455 0.00 0.00 0.00 3.71
419 420 2.118679 ACCATCCAGATCCATTGTCGA 58.881 47.619 0.00 0.00 0.00 4.20
420 421 2.615447 CAACCATCCAGATCCATTGTCG 59.385 50.000 0.00 0.00 0.00 4.35
421 422 3.379372 CACAACCATCCAGATCCATTGTC 59.621 47.826 0.00 0.00 0.00 3.18
422 423 3.245371 ACACAACCATCCAGATCCATTGT 60.245 43.478 0.00 0.00 0.00 2.71
423 424 3.359033 ACACAACCATCCAGATCCATTG 58.641 45.455 0.00 0.00 0.00 2.82
424 425 3.744940 ACACAACCATCCAGATCCATT 57.255 42.857 0.00 0.00 0.00 3.16
425 426 3.359033 CAACACAACCATCCAGATCCAT 58.641 45.455 0.00 0.00 0.00 3.41
426 427 2.794103 CAACACAACCATCCAGATCCA 58.206 47.619 0.00 0.00 0.00 3.41
427 428 1.474077 GCAACACAACCATCCAGATCC 59.526 52.381 0.00 0.00 0.00 3.36
428 429 2.161855 TGCAACACAACCATCCAGATC 58.838 47.619 0.00 0.00 0.00 2.75
429 430 2.291209 TGCAACACAACCATCCAGAT 57.709 45.000 0.00 0.00 0.00 2.90
430 431 2.291209 ATGCAACACAACCATCCAGA 57.709 45.000 0.00 0.00 0.00 3.86
431 432 2.424601 CCTATGCAACACAACCATCCAG 59.575 50.000 0.00 0.00 0.00 3.86
432 433 2.445427 CCTATGCAACACAACCATCCA 58.555 47.619 0.00 0.00 0.00 3.41
433 434 1.750778 CCCTATGCAACACAACCATCC 59.249 52.381 0.00 0.00 0.00 3.51
434 435 1.134946 GCCCTATGCAACACAACCATC 59.865 52.381 0.00 0.00 40.77 3.51
435 436 1.185315 GCCCTATGCAACACAACCAT 58.815 50.000 0.00 0.00 40.77 3.55
436 437 0.897863 GGCCCTATGCAACACAACCA 60.898 55.000 0.00 0.00 43.89 3.67
437 438 1.604147 GGGCCCTATGCAACACAACC 61.604 60.000 17.04 0.00 43.89 3.77
438 439 0.897863 TGGGCCCTATGCAACACAAC 60.898 55.000 25.70 0.00 43.89 3.32
439 440 0.040942 ATGGGCCCTATGCAACACAA 59.959 50.000 25.70 0.00 43.89 3.33
440 441 0.922626 TATGGGCCCTATGCAACACA 59.077 50.000 25.70 0.00 43.89 3.72
441 442 2.065899 TTATGGGCCCTATGCAACAC 57.934 50.000 25.70 0.00 43.89 3.32
442 443 3.326946 AATTATGGGCCCTATGCAACA 57.673 42.857 25.70 0.00 43.89 3.33
443 444 3.244181 CCAAATTATGGGCCCTATGCAAC 60.244 47.826 25.70 0.00 46.27 4.17
444 445 2.971330 CCAAATTATGGGCCCTATGCAA 59.029 45.455 25.70 9.85 46.27 4.08
445 446 2.607499 CCAAATTATGGGCCCTATGCA 58.393 47.619 25.70 1.02 46.27 3.96
459 460 5.600484 TGAAAAGGTACACCATCACCAAATT 59.400 36.000 0.38 0.00 37.28 1.82
462 463 4.171878 TGAAAAGGTACACCATCACCAA 57.828 40.909 0.38 0.00 37.28 3.67
463 464 3.866703 TGAAAAGGTACACCATCACCA 57.133 42.857 0.38 0.00 37.28 4.17
464 465 3.374058 CGATGAAAAGGTACACCATCACC 59.626 47.826 0.38 0.00 38.89 4.02
465 466 4.092968 GTCGATGAAAAGGTACACCATCAC 59.907 45.833 0.38 0.00 38.89 3.06
466 467 4.250464 GTCGATGAAAAGGTACACCATCA 58.750 43.478 0.38 2.95 38.89 3.07
467 468 3.306166 CGTCGATGAAAAGGTACACCATC 59.694 47.826 0.00 0.00 38.89 3.51
468 469 3.259064 CGTCGATGAAAAGGTACACCAT 58.741 45.455 0.00 0.00 38.89 3.55
469 470 2.036217 ACGTCGATGAAAAGGTACACCA 59.964 45.455 12.58 0.00 38.89 4.17
470 471 2.665052 GACGTCGATGAAAAGGTACACC 59.335 50.000 12.58 0.00 0.00 4.16
472 473 2.587956 CGACGTCGATGAAAAGGTACA 58.412 47.619 33.35 0.00 43.02 2.90
491 493 2.342179 GCTCAGGAGAAGAAAAGACCG 58.658 52.381 0.00 0.00 0.00 4.79
528 530 4.320421 CCTCTTGCACGAACAAATCATGAA 60.320 41.667 0.00 0.00 0.00 2.57
530 532 3.189080 TCCTCTTGCACGAACAAATCATG 59.811 43.478 0.00 0.00 0.00 3.07
531 533 3.189287 GTCCTCTTGCACGAACAAATCAT 59.811 43.478 0.00 0.00 0.00 2.45
537 539 0.033504 GAGGTCCTCTTGCACGAACA 59.966 55.000 12.02 0.00 0.00 3.18
541 543 1.444553 GACGAGGTCCTCTTGCACG 60.445 63.158 17.00 5.62 0.00 5.34
543 545 0.532573 GATGACGAGGTCCTCTTGCA 59.467 55.000 17.00 11.62 0.00 4.08
566 568 4.335315 TGAACGAGAAGAAACACATTGCTT 59.665 37.500 0.00 0.00 0.00 3.91
582 584 9.262472 GTATACAACAAGCTAAAATTGAACGAG 57.738 33.333 0.00 0.00 0.00 4.18
590 592 7.064253 GGACGACTGTATACAACAAGCTAAAAT 59.936 37.037 7.06 0.00 37.74 1.82
632 634 7.988028 GCTCCAAACTACCTACAATTCTAAGAT 59.012 37.037 0.00 0.00 0.00 2.40
647 649 0.948678 TTTGCACCGCTCCAAACTAC 59.051 50.000 0.00 0.00 0.00 2.73
649 651 0.465460 TCTTTGCACCGCTCCAAACT 60.465 50.000 0.00 0.00 0.00 2.66
651 653 1.269448 GATTCTTTGCACCGCTCCAAA 59.731 47.619 0.00 0.00 0.00 3.28
652 654 0.881118 GATTCTTTGCACCGCTCCAA 59.119 50.000 0.00 0.00 0.00 3.53
655 657 2.704725 TTTGATTCTTTGCACCGCTC 57.295 45.000 0.00 0.00 0.00 5.03
656 658 2.100584 TGTTTTGATTCTTTGCACCGCT 59.899 40.909 0.00 0.00 0.00 5.52
657 659 2.468831 TGTTTTGATTCTTTGCACCGC 58.531 42.857 0.00 0.00 0.00 5.68
674 2425 2.036387 GTGTTTGCCCCTAGGTTTGTT 58.964 47.619 8.29 0.00 34.57 2.83
676 2427 1.339929 GTGTGTTTGCCCCTAGGTTTG 59.660 52.381 8.29 0.00 34.57 2.93
688 2439 6.303970 CGCTGATAAGAATTTGAGTGTGTTTG 59.696 38.462 0.00 0.00 0.00 2.93
736 2488 2.213499 GGAATTCCATGAGGCTACACG 58.787 52.381 20.04 0.00 35.64 4.49
740 2492 3.251484 CCTAGGGAATTCCATGAGGCTA 58.749 50.000 25.67 14.62 38.24 3.93
741 2493 2.061061 CCTAGGGAATTCCATGAGGCT 58.939 52.381 25.67 14.28 38.24 4.58
745 2497 3.144068 TCCACCTAGGGAATTCCATGA 57.856 47.619 25.67 9.28 38.24 3.07
755 2507 4.536090 TGGCATATTCTATTCCACCTAGGG 59.464 45.833 14.81 1.73 38.24 3.53
758 2510 6.763715 AACTGGCATATTCTATTCCACCTA 57.236 37.500 0.00 0.00 0.00 3.08
767 2519 4.893524 TCTCGAGGAAACTGGCATATTCTA 59.106 41.667 13.56 0.00 44.43 2.10
780 2532 2.029380 TCTTGCACGAATCTCGAGGAAA 60.029 45.455 13.56 0.00 43.74 3.13
842 2594 1.618837 TCAGTCCAAGCCTCAGTACAC 59.381 52.381 0.00 0.00 0.00 2.90
843 2595 2.009681 TCAGTCCAAGCCTCAGTACA 57.990 50.000 0.00 0.00 0.00 2.90
869 2621 1.376812 GCTGACCGGTTTACTGGGG 60.377 63.158 9.42 3.62 46.75 4.96
914 2668 2.261729 GAGTAGAGGATTGGGGGATCC 58.738 57.143 1.92 1.92 44.91 3.36
931 2685 0.252197 GTATTTGGGTGGAGGCGAGT 59.748 55.000 0.00 0.00 0.00 4.18
958 2712 0.110823 CGGGCGTTCGAAGTTTTCTG 60.111 55.000 0.00 0.00 0.00 3.02
961 2715 2.635338 GCGGGCGTTCGAAGTTTT 59.365 55.556 0.00 0.00 0.00 2.43
1029 2783 3.041874 CAGCTTCACCTGCTCGTAG 57.958 57.895 0.00 0.00 38.92 3.51
1059 2813 3.370103 CCAGGTAGACCTTGGCGAAATTA 60.370 47.826 0.00 0.00 46.09 1.40
1080 2834 3.649986 GTATCCATGTGCCGCGCC 61.650 66.667 0.00 0.00 0.00 6.53
1215 2969 1.211969 CATCACCTTGTGCAGCTGC 59.788 57.895 31.89 31.89 42.50 5.25
1221 2975 2.562912 CACGCCATCACCTTGTGC 59.437 61.111 0.00 0.00 32.98 4.57
1236 2990 1.278238 CGAAGATACGGGACTTGCAC 58.722 55.000 0.00 0.00 0.00 4.57
1248 3002 3.246936 CGTACTCCATGACGACGAAGATA 59.753 47.826 0.00 0.00 41.60 1.98
1362 3116 2.031163 GCGTGGCAGAAGGTGAGT 59.969 61.111 0.00 0.00 0.00 3.41
1395 3149 3.754530 TCGGGCTTGATGTCGCGA 61.755 61.111 3.71 3.71 43.59 5.87
1563 3317 4.776322 TCCGCCTTGGCACCATCG 62.776 66.667 12.45 0.00 37.80 3.84
1590 3344 1.880340 GAAGAGGACGATGCCGCAG 60.880 63.158 0.00 0.00 39.95 5.18
1656 3410 2.408050 CGGCAGATTGTCCTGTATAGC 58.592 52.381 0.00 0.00 36.57 2.97
1659 3413 0.530650 CGCGGCAGATTGTCCTGTAT 60.531 55.000 0.00 0.00 36.57 2.29
1663 3417 3.706373 ACCGCGGCAGATTGTCCT 61.706 61.111 28.58 0.00 0.00 3.85
1761 3515 4.937620 TCCTTGATTTGCAGTAGTGTGATC 59.062 41.667 0.00 1.98 0.00 2.92
1770 3524 5.510179 CCAATCTGTTTCCTTGATTTGCAGT 60.510 40.000 0.00 0.00 0.00 4.40
1803 3557 5.984695 AGAAACTTATTTCCTTGAAGCCC 57.015 39.130 0.00 0.00 44.66 5.19
1816 3570 9.530633 GTCCTTGTTGTCGATATAGAAACTTAT 57.469 33.333 0.00 0.00 0.00 1.73
1818 3572 7.545965 CAGTCCTTGTTGTCGATATAGAAACTT 59.454 37.037 0.00 0.00 0.00 2.66
1827 3581 1.899814 AGGCAGTCCTTGTTGTCGATA 59.100 47.619 0.00 0.00 40.66 2.92
1944 3698 2.903855 CCATCGCCATGAGCCACC 60.904 66.667 0.00 0.00 38.78 4.61
2049 3803 7.582352 CGTTCATACTCTTGATCCGTCTTATA 58.418 38.462 0.00 0.00 0.00 0.98
2067 3821 4.941727 GATAATGTCGAACGCGTTCATA 57.058 40.909 40.99 29.57 39.46 2.15
2133 3887 3.911155 GAAACGCAACTGCTCGCCG 62.911 63.158 0.00 0.00 39.32 6.46
2166 3920 3.755378 GCTTCTTGATGATGGTGTTCACT 59.245 43.478 2.98 0.00 0.00 3.41
2172 3926 2.943690 CTCCAGCTTCTTGATGATGGTG 59.056 50.000 16.62 12.26 43.54 4.17
2182 3936 0.463620 GCGATCTCCTCCAGCTTCTT 59.536 55.000 0.00 0.00 0.00 2.52
2183 3937 1.398958 GGCGATCTCCTCCAGCTTCT 61.399 60.000 0.00 0.00 0.00 2.85
2331 4085 1.678728 CCGGCTTTCTTGCATACCTGA 60.679 52.381 0.00 0.00 34.04 3.86
2550 4310 4.750098 CACCACTAACACTGTTTAGTCCTG 59.250 45.833 0.00 6.94 39.77 3.86
2589 4349 4.096382 ACACAACACTTGGAACTCAATGTC 59.904 41.667 0.00 0.00 34.45 3.06
2590 4350 4.016444 ACACAACACTTGGAACTCAATGT 58.984 39.130 0.00 0.00 34.45 2.71
2593 4355 4.839121 ACTACACAACACTTGGAACTCAA 58.161 39.130 0.00 0.00 34.12 3.02
2601 4363 2.935849 TGTGCAGACTACACAACACTTG 59.064 45.455 6.02 0.00 44.68 3.16
2673 4437 7.681939 TCAACCTCAAAATTAACTTCGCTAT 57.318 32.000 0.00 0.00 0.00 2.97
2674 4438 7.681939 ATCAACCTCAAAATTAACTTCGCTA 57.318 32.000 0.00 0.00 0.00 4.26
2677 4441 7.651704 ACCAAATCAACCTCAAAATTAACTTCG 59.348 33.333 0.00 0.00 0.00 3.79
2678 4442 8.887036 ACCAAATCAACCTCAAAATTAACTTC 57.113 30.769 0.00 0.00 0.00 3.01
2781 4550 5.808366 TCATTCACATATCAGGGGACTAC 57.192 43.478 0.00 0.00 40.21 2.73
2783 4552 5.133322 ACAATCATTCACATATCAGGGGACT 59.867 40.000 0.00 0.00 46.44 3.85
2828 4597 3.643199 TCCATAGTTAAGCATGCACCA 57.357 42.857 21.98 0.47 0.00 4.17
2831 4600 5.439721 ACAAGATCCATAGTTAAGCATGCA 58.560 37.500 21.98 0.00 0.00 3.96
2832 4601 6.204359 CAACAAGATCCATAGTTAAGCATGC 58.796 40.000 10.51 10.51 0.00 4.06
2861 4631 5.964958 TGTGATTCCAAGATTGAAACTCC 57.035 39.130 0.00 0.00 0.00 3.85
2863 4633 6.071728 GGACATGTGATTCCAAGATTGAAACT 60.072 38.462 1.15 0.00 0.00 2.66
2864 4634 6.071728 AGGACATGTGATTCCAAGATTGAAAC 60.072 38.462 1.15 0.00 33.92 2.78
2886 4658 2.621070 ACCTTGAGTGCTAGGAAAGGA 58.379 47.619 17.35 0.00 39.88 3.36
2918 4693 4.020218 CCACAGTTTCACCTGAGGAAGATA 60.020 45.833 4.99 0.00 43.48 1.98
3064 4841 0.313672 TTTGTCAGAAACATGCGCCC 59.686 50.000 4.18 0.00 37.82 6.13
3068 4845 3.069443 TCCCCTTTTTGTCAGAAACATGC 59.931 43.478 0.00 0.00 37.82 4.06
3159 4936 3.726557 ATCCCATGGTGCTATGGTATG 57.273 47.619 11.73 0.00 44.98 2.39
3161 4938 4.019411 CACATATCCCATGGTGCTATGGTA 60.019 45.833 20.74 5.09 44.98 3.25
3172 4949 3.715638 ATCTCTGGCACATATCCCATG 57.284 47.619 0.00 0.00 38.20 3.66
3180 4957 5.510179 CCAAAGACAAAAATCTCTGGCACAT 60.510 40.000 0.00 0.00 38.20 3.21
3196 4973 8.652081 TGCAAGGTAGCTAATGTCCAAAGACA 62.652 42.308 0.00 0.00 45.50 3.41
3231 5011 5.352569 CGGATGAGAACAAAAAGAGCAGTAT 59.647 40.000 0.00 0.00 0.00 2.12
3240 5020 4.642885 ACCTTTCACGGATGAGAACAAAAA 59.357 37.500 0.00 0.00 35.83 1.94
3267 5047 5.431765 GAAAGATTGCAGAGAGGTTATGGA 58.568 41.667 0.00 0.00 0.00 3.41
3271 5051 4.908601 TGGAAAGATTGCAGAGAGGTTA 57.091 40.909 0.00 0.00 0.00 2.85
3350 5130 2.582052 ACAAAGAATGGTTCGGCTTGA 58.418 42.857 8.28 0.00 34.02 3.02
3356 5136 5.673337 TGAAGAGAACAAAGAATGGTTCG 57.327 39.130 0.00 0.00 46.09 3.95
3384 5164 1.133513 AGGACCACTGTCATTTGGCAA 60.134 47.619 0.00 0.00 43.65 4.52
3420 5200 2.682856 ACATGTTGCTGTTTTGACGAGT 59.317 40.909 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.