Multiple sequence alignment - TraesCS7A01G348200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G348200 chr7A 100.000 3334 0 0 1 3334 510908296 510904963 0.000000e+00 6157
1 TraesCS7A01G348200 chr7A 95.429 175 6 2 3161 3334 32537887 32537714 9.110000e-71 278
2 TraesCS7A01G348200 chr7A 94.857 175 8 1 3161 3334 701624432 701624606 4.240000e-69 272
3 TraesCS7A01G348200 chr7A 94.828 174 8 1 3162 3334 730826982 730827155 1.520000e-68 270
4 TraesCS7A01G348200 chr7A 94.253 174 9 1 3162 3334 24406408 24406581 7.090000e-67 265
5 TraesCS7A01G348200 chr7D 88.694 2114 143 29 278 2350 422209540 422211598 0.000000e+00 2492
6 TraesCS7A01G348200 chr7D 86.313 716 48 14 2417 3110 422211624 422212311 0.000000e+00 734
7 TraesCS7A01G348200 chr7D 89.474 95 9 1 1000 1093 621067874 621067968 5.840000e-23 119
8 TraesCS7A01G348200 chr7B 89.886 1938 108 27 497 2415 438881436 438879568 0.000000e+00 2412
9 TraesCS7A01G348200 chr7B 88.824 680 43 18 2425 3092 438878274 438877616 0.000000e+00 804
10 TraesCS7A01G348200 chr1B 93.909 394 22 2 1281 1673 650473594 650473202 7.960000e-166 593
11 TraesCS7A01G348200 chr1B 92.233 103 8 0 1128 1230 650473015 650473117 2.680000e-31 147
12 TraesCS7A01G348200 chr2D 80.790 734 105 15 1000 1707 649880002 649880725 2.930000e-150 542
13 TraesCS7A01G348200 chr2A 98.925 279 3 0 1 279 52590136 52590414 1.790000e-137 499
14 TraesCS7A01G348200 chr2A 79.447 759 106 20 1009 1732 734293246 734292503 2.990000e-135 492
15 TraesCS7A01G348200 chr2A 95.402 174 7 1 3162 3334 705739335 705739162 3.280000e-70 276
16 TraesCS7A01G348200 chr6A 97.586 290 5 2 1 290 549290781 549290494 2.310000e-136 496
17 TraesCS7A01G348200 chr6A 94.828 174 8 1 3162 3334 614646761 614646588 1.520000e-68 270
18 TraesCS7A01G348200 chr5A 97.849 279 6 0 1 279 29628507 29628229 1.800000e-132 483
19 TraesCS7A01G348200 chr4A 97.826 276 6 0 1 276 637616734 637616459 8.370000e-131 477
20 TraesCS7A01G348200 chr4A 95.429 175 7 1 3161 3334 376675178 376675352 9.110000e-71 278
21 TraesCS7A01G348200 chr3A 97.112 277 8 0 1 277 25384037 25384313 5.040000e-128 468
22 TraesCS7A01G348200 chr3A 96.694 242 6 1 35 276 483677292 483677053 5.180000e-108 401
23 TraesCS7A01G348200 chr3A 94.318 176 9 1 3160 3334 399898438 399898263 5.480000e-68 268
24 TraesCS7A01G348200 chr5D 95.668 277 12 0 1 277 483217844 483217568 2.360000e-121 446
25 TraesCS7A01G348200 chr6D 95.849 265 11 0 1 265 106696431 106696695 2.380000e-116 429
26 TraesCS7A01G348200 chr2B 93.885 278 17 0 1 278 689476816 689477093 1.430000e-113 420
27 TraesCS7A01G348200 chr3D 81.710 503 71 7 1000 1488 575514726 575514231 1.860000e-107 399
28 TraesCS7A01G348200 chr1A 94.857 175 8 1 3161 3334 538889837 538889663 4.240000e-69 272
29 TraesCS7A01G348200 chr1A 83.028 218 35 2 1167 1383 4159727 4159511 2.620000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G348200 chr7A 510904963 510908296 3333 True 6157 6157 100.0000 1 3334 1 chr7A.!!$R2 3333
1 TraesCS7A01G348200 chr7D 422209540 422212311 2771 False 1613 2492 87.5035 278 3110 2 chr7D.!!$F2 2832
2 TraesCS7A01G348200 chr7B 438877616 438881436 3820 True 1608 2412 89.3550 497 3092 2 chr7B.!!$R1 2595
3 TraesCS7A01G348200 chr2D 649880002 649880725 723 False 542 542 80.7900 1000 1707 1 chr2D.!!$F1 707
4 TraesCS7A01G348200 chr2A 734292503 734293246 743 True 492 492 79.4470 1009 1732 1 chr2A.!!$R2 723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 872 0.032952 ACGAAAGAGCGGCTGTAACA 59.967 50.0 7.5 0.0 35.12 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2400 2477 0.400213 CCTGCCCCTCTTGTTGTGTA 59.6 55.0 0.0 0.0 0.0 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.842531 TGGAGGCTATCAATCTGTTGAA 57.157 40.909 0.00 0.00 46.67 2.69
23 24 4.774124 TGGAGGCTATCAATCTGTTGAAG 58.226 43.478 0.00 0.00 46.67 3.02
24 25 4.471025 TGGAGGCTATCAATCTGTTGAAGA 59.529 41.667 0.00 0.00 46.67 2.87
25 26 5.045651 TGGAGGCTATCAATCTGTTGAAGAA 60.046 40.000 0.00 0.00 46.67 2.52
26 27 5.526846 GGAGGCTATCAATCTGTTGAAGAAG 59.473 44.000 0.00 0.00 46.67 2.85
27 28 5.435291 AGGCTATCAATCTGTTGAAGAAGG 58.565 41.667 0.00 0.00 46.67 3.46
28 29 4.578105 GGCTATCAATCTGTTGAAGAAGGG 59.422 45.833 0.00 0.00 46.67 3.95
29 30 5.431765 GCTATCAATCTGTTGAAGAAGGGA 58.568 41.667 0.00 0.00 46.67 4.20
30 31 5.526846 GCTATCAATCTGTTGAAGAAGGGAG 59.473 44.000 0.00 0.00 46.67 4.30
31 32 5.768980 ATCAATCTGTTGAAGAAGGGAGA 57.231 39.130 0.00 0.00 46.67 3.71
32 33 5.567037 TCAATCTGTTGAAGAAGGGAGAA 57.433 39.130 0.00 0.00 41.22 2.87
33 34 5.940617 TCAATCTGTTGAAGAAGGGAGAAA 58.059 37.500 0.00 0.00 41.22 2.52
34 35 6.546484 TCAATCTGTTGAAGAAGGGAGAAAT 58.454 36.000 0.00 0.00 41.22 2.17
35 36 6.432162 TCAATCTGTTGAAGAAGGGAGAAATG 59.568 38.462 0.00 0.00 41.22 2.32
36 37 4.655963 TCTGTTGAAGAAGGGAGAAATGG 58.344 43.478 0.00 0.00 29.54 3.16
37 38 4.350816 TCTGTTGAAGAAGGGAGAAATGGA 59.649 41.667 0.00 0.00 29.54 3.41
38 39 5.014544 TCTGTTGAAGAAGGGAGAAATGGAT 59.985 40.000 0.00 0.00 29.54 3.41
39 40 6.215431 TCTGTTGAAGAAGGGAGAAATGGATA 59.785 38.462 0.00 0.00 29.54 2.59
40 41 6.418101 TGTTGAAGAAGGGAGAAATGGATAG 58.582 40.000 0.00 0.00 0.00 2.08
41 42 6.215431 TGTTGAAGAAGGGAGAAATGGATAGA 59.785 38.462 0.00 0.00 0.00 1.98
42 43 7.092264 TGTTGAAGAAGGGAGAAATGGATAGAT 60.092 37.037 0.00 0.00 0.00 1.98
43 44 7.072263 TGAAGAAGGGAGAAATGGATAGATC 57.928 40.000 0.00 0.00 0.00 2.75
44 45 6.848631 TGAAGAAGGGAGAAATGGATAGATCT 59.151 38.462 0.00 0.00 0.00 2.75
45 46 6.684897 AGAAGGGAGAAATGGATAGATCTG 57.315 41.667 5.18 0.00 0.00 2.90
46 47 4.906747 AGGGAGAAATGGATAGATCTGC 57.093 45.455 5.18 0.00 0.00 4.26
47 48 3.260380 AGGGAGAAATGGATAGATCTGCG 59.740 47.826 5.18 0.00 31.79 5.18
48 49 3.259374 GGGAGAAATGGATAGATCTGCGA 59.741 47.826 5.18 0.00 31.79 5.10
49 50 4.262635 GGGAGAAATGGATAGATCTGCGAA 60.263 45.833 5.18 0.00 31.79 4.70
50 51 4.688413 GGAGAAATGGATAGATCTGCGAAC 59.312 45.833 5.18 0.00 0.00 3.95
51 52 5.282055 AGAAATGGATAGATCTGCGAACA 57.718 39.130 5.18 0.00 0.00 3.18
52 53 5.295950 AGAAATGGATAGATCTGCGAACAG 58.704 41.667 5.18 0.00 45.95 3.16
53 54 4.679373 AATGGATAGATCTGCGAACAGT 57.321 40.909 5.18 0.00 44.77 3.55
54 55 4.679373 ATGGATAGATCTGCGAACAGTT 57.321 40.909 5.18 0.00 44.77 3.16
55 56 4.471904 TGGATAGATCTGCGAACAGTTT 57.528 40.909 5.18 0.00 44.77 2.66
56 57 4.433615 TGGATAGATCTGCGAACAGTTTC 58.566 43.478 5.18 0.00 44.77 2.78
57 58 4.081697 TGGATAGATCTGCGAACAGTTTCA 60.082 41.667 5.18 0.00 44.77 2.69
58 59 5.053145 GGATAGATCTGCGAACAGTTTCAT 58.947 41.667 5.18 0.00 44.77 2.57
59 60 5.050499 GGATAGATCTGCGAACAGTTTCATG 60.050 44.000 5.18 0.00 44.77 3.07
60 61 3.005554 AGATCTGCGAACAGTTTCATGG 58.994 45.455 0.00 0.00 44.77 3.66
61 62 2.254546 TCTGCGAACAGTTTCATGGT 57.745 45.000 0.00 0.00 44.77 3.55
62 63 2.571212 TCTGCGAACAGTTTCATGGTT 58.429 42.857 0.00 0.00 44.77 3.67
63 64 2.548057 TCTGCGAACAGTTTCATGGTTC 59.452 45.455 0.00 0.00 44.77 3.62
64 65 2.290367 CTGCGAACAGTTTCATGGTTCA 59.710 45.455 10.93 0.00 40.62 3.18
65 66 2.884012 TGCGAACAGTTTCATGGTTCAT 59.116 40.909 10.93 0.00 40.62 2.57
66 67 3.236816 GCGAACAGTTTCATGGTTCATG 58.763 45.455 10.93 1.76 42.60 3.07
67 68 7.268013 CTGCGAACAGTTTCATGGTTCATGA 62.268 44.000 6.50 6.50 42.45 3.07
68 69 8.646414 CTGCGAACAGTTTCATGGTTCATGAA 62.646 42.308 16.48 16.48 45.75 2.57
81 82 9.022884 TCATGGTTCATGAAATCAAAATACTCA 57.977 29.630 10.35 0.00 46.17 3.41
82 83 9.811995 CATGGTTCATGAAATCAAAATACTCAT 57.188 29.630 10.35 0.00 43.81 2.90
83 84 9.811995 ATGGTTCATGAAATCAAAATACTCATG 57.188 29.630 10.35 4.37 43.02 3.07
84 85 8.252417 TGGTTCATGAAATCAAAATACTCATGG 58.748 33.333 10.35 0.00 42.30 3.66
85 86 8.469200 GGTTCATGAAATCAAAATACTCATGGA 58.531 33.333 10.35 0.00 42.30 3.41
88 89 9.411189 TCATGAAATCAAAATACTCATGGATCA 57.589 29.630 9.73 0.00 42.30 2.92
91 92 8.183536 TGAAATCAAAATACTCATGGATCAACG 58.816 33.333 0.00 0.00 0.00 4.10
92 93 7.864108 AATCAAAATACTCATGGATCAACGA 57.136 32.000 0.00 0.00 0.00 3.85
93 94 7.864108 ATCAAAATACTCATGGATCAACGAA 57.136 32.000 0.00 0.00 0.00 3.85
94 95 7.680442 TCAAAATACTCATGGATCAACGAAA 57.320 32.000 0.00 0.00 0.00 3.46
95 96 8.279970 TCAAAATACTCATGGATCAACGAAAT 57.720 30.769 0.00 0.00 0.00 2.17
96 97 8.739039 TCAAAATACTCATGGATCAACGAAATT 58.261 29.630 0.00 0.00 0.00 1.82
97 98 9.013490 CAAAATACTCATGGATCAACGAAATTC 57.987 33.333 0.00 0.00 0.00 2.17
98 99 8.511604 AAATACTCATGGATCAACGAAATTCT 57.488 30.769 0.00 0.00 0.00 2.40
99 100 8.511604 AATACTCATGGATCAACGAAATTCTT 57.488 30.769 0.00 0.00 0.00 2.52
100 101 6.187125 ACTCATGGATCAACGAAATTCTTG 57.813 37.500 0.00 0.00 0.00 3.02
101 102 5.707298 ACTCATGGATCAACGAAATTCTTGT 59.293 36.000 0.00 0.00 0.00 3.16
102 103 6.878923 ACTCATGGATCAACGAAATTCTTGTA 59.121 34.615 0.00 0.00 0.00 2.41
103 104 7.554118 ACTCATGGATCAACGAAATTCTTGTAT 59.446 33.333 0.00 0.00 0.00 2.29
104 105 8.279970 TCATGGATCAACGAAATTCTTGTATT 57.720 30.769 0.00 0.00 0.00 1.89
105 106 9.389755 TCATGGATCAACGAAATTCTTGTATTA 57.610 29.630 0.00 0.00 0.00 0.98
106 107 9.438291 CATGGATCAACGAAATTCTTGTATTAC 57.562 33.333 0.00 0.00 0.00 1.89
107 108 8.786826 TGGATCAACGAAATTCTTGTATTACT 57.213 30.769 0.00 0.00 0.00 2.24
108 109 8.879759 TGGATCAACGAAATTCTTGTATTACTC 58.120 33.333 0.00 0.00 0.00 2.59
109 110 8.879759 GGATCAACGAAATTCTTGTATTACTCA 58.120 33.333 0.00 0.00 0.00 3.41
110 111 9.690434 GATCAACGAAATTCTTGTATTACTCAC 57.310 33.333 0.00 0.00 0.00 3.51
111 112 8.596271 TCAACGAAATTCTTGTATTACTCACA 57.404 30.769 0.00 0.00 0.00 3.58
112 113 9.214957 TCAACGAAATTCTTGTATTACTCACAT 57.785 29.630 0.00 0.00 0.00 3.21
113 114 9.825972 CAACGAAATTCTTGTATTACTCACATT 57.174 29.630 0.00 0.00 0.00 2.71
131 132 9.507329 ACTCACATTTATCATAGTCAAAACACT 57.493 29.630 0.00 0.00 0.00 3.55
132 133 9.764870 CTCACATTTATCATAGTCAAAACACTG 57.235 33.333 0.00 0.00 0.00 3.66
133 134 9.283768 TCACATTTATCATAGTCAAAACACTGT 57.716 29.630 0.00 0.00 0.00 3.55
138 139 6.743575 ATCATAGTCAAAACACTGTAAGCC 57.256 37.500 0.00 0.00 37.60 4.35
139 140 5.616270 TCATAGTCAAAACACTGTAAGCCA 58.384 37.500 0.00 0.00 37.60 4.75
140 141 6.237901 TCATAGTCAAAACACTGTAAGCCAT 58.762 36.000 0.00 0.00 37.60 4.40
141 142 6.714810 TCATAGTCAAAACACTGTAAGCCATT 59.285 34.615 0.00 0.00 37.60 3.16
142 143 5.852282 AGTCAAAACACTGTAAGCCATTT 57.148 34.783 0.00 0.00 37.60 2.32
143 144 5.591099 AGTCAAAACACTGTAAGCCATTTG 58.409 37.500 0.00 0.00 37.60 2.32
144 145 5.127031 AGTCAAAACACTGTAAGCCATTTGT 59.873 36.000 0.00 0.00 37.60 2.83
145 146 5.810074 GTCAAAACACTGTAAGCCATTTGTT 59.190 36.000 0.00 0.00 37.60 2.83
146 147 5.809562 TCAAAACACTGTAAGCCATTTGTTG 59.190 36.000 0.00 0.00 37.60 3.33
160 161 6.897259 CCATTTGTTGGCATCTTTTGATAG 57.103 37.500 0.00 0.00 39.09 2.08
161 162 6.632909 CCATTTGTTGGCATCTTTTGATAGA 58.367 36.000 0.00 0.00 39.09 1.98
162 163 7.098477 CCATTTGTTGGCATCTTTTGATAGAA 58.902 34.615 0.00 0.00 39.09 2.10
163 164 7.063780 CCATTTGTTGGCATCTTTTGATAGAAC 59.936 37.037 0.00 0.00 39.09 3.01
164 165 6.899393 TTGTTGGCATCTTTTGATAGAACT 57.101 33.333 0.00 0.00 37.40 3.01
165 166 7.994425 TTGTTGGCATCTTTTGATAGAACTA 57.006 32.000 0.00 0.00 37.40 2.24
166 167 7.377766 TGTTGGCATCTTTTGATAGAACTAC 57.622 36.000 0.00 0.00 37.40 2.73
167 168 6.092122 TGTTGGCATCTTTTGATAGAACTACG 59.908 38.462 0.00 0.00 37.40 3.51
168 169 5.116180 TGGCATCTTTTGATAGAACTACGG 58.884 41.667 0.00 0.00 37.40 4.02
169 170 4.511826 GGCATCTTTTGATAGAACTACGGG 59.488 45.833 0.00 0.00 37.40 5.28
170 171 5.116882 GCATCTTTTGATAGAACTACGGGT 58.883 41.667 0.00 0.00 37.40 5.28
171 172 5.234543 GCATCTTTTGATAGAACTACGGGTC 59.765 44.000 0.00 0.00 37.40 4.46
172 173 4.990257 TCTTTTGATAGAACTACGGGTCG 58.010 43.478 0.00 0.00 0.00 4.79
173 174 4.460382 TCTTTTGATAGAACTACGGGTCGT 59.540 41.667 0.00 0.00 44.35 4.34
174 175 5.647658 TCTTTTGATAGAACTACGGGTCGTA 59.352 40.000 0.28 0.28 41.54 3.43
175 176 4.882671 TTGATAGAACTACGGGTCGTAC 57.117 45.455 0.00 0.00 41.54 3.67
176 177 3.206150 TGATAGAACTACGGGTCGTACC 58.794 50.000 0.00 0.00 41.54 3.34
177 178 2.779755 TAGAACTACGGGTCGTACCA 57.220 50.000 6.41 0.00 41.02 3.25
178 179 2.134789 AGAACTACGGGTCGTACCAT 57.865 50.000 6.41 0.00 41.02 3.55
179 180 1.747355 AGAACTACGGGTCGTACCATG 59.253 52.381 6.41 0.00 41.02 3.66
180 181 0.819582 AACTACGGGTCGTACCATGG 59.180 55.000 11.19 11.19 41.02 3.66
181 182 0.323725 ACTACGGGTCGTACCATGGT 60.324 55.000 23.55 23.55 41.02 3.55
182 183 0.101759 CTACGGGTCGTACCATGGTG 59.898 60.000 28.17 11.95 41.02 4.17
183 184 0.611618 TACGGGTCGTACCATGGTGT 60.612 55.000 28.17 16.51 41.02 4.16
184 185 1.447140 CGGGTCGTACCATGGTGTG 60.447 63.158 28.17 18.71 41.02 3.82
192 193 2.591753 CCATGGTGTGGCTCGGAT 59.408 61.111 2.57 0.00 42.12 4.18
193 194 1.524621 CCATGGTGTGGCTCGGATC 60.525 63.158 2.57 0.00 42.12 3.36
194 195 1.524002 CATGGTGTGGCTCGGATCT 59.476 57.895 0.00 0.00 0.00 2.75
195 196 0.812811 CATGGTGTGGCTCGGATCTG 60.813 60.000 0.00 0.00 0.00 2.90
196 197 1.976132 ATGGTGTGGCTCGGATCTGG 61.976 60.000 0.62 0.00 0.00 3.86
197 198 2.359169 GGTGTGGCTCGGATCTGGA 61.359 63.158 0.62 0.00 0.00 3.86
198 199 1.153549 GTGTGGCTCGGATCTGGAC 60.154 63.158 0.62 0.00 0.00 4.02
199 200 2.359169 TGTGGCTCGGATCTGGACC 61.359 63.158 0.62 4.30 0.00 4.46
200 201 2.060980 GTGGCTCGGATCTGGACCT 61.061 63.158 13.05 0.00 0.00 3.85
201 202 2.060383 TGGCTCGGATCTGGACCTG 61.060 63.158 13.05 0.00 0.00 4.00
202 203 1.758514 GGCTCGGATCTGGACCTGA 60.759 63.158 3.23 3.23 0.00 3.86
203 204 1.118356 GGCTCGGATCTGGACCTGAT 61.118 60.000 13.32 13.32 0.00 2.90
204 205 0.033228 GCTCGGATCTGGACCTGATG 59.967 60.000 17.83 5.61 0.00 3.07
205 206 1.697284 CTCGGATCTGGACCTGATGA 58.303 55.000 17.83 9.33 0.00 2.92
206 207 1.612950 CTCGGATCTGGACCTGATGAG 59.387 57.143 17.83 14.32 0.00 2.90
207 208 0.678395 CGGATCTGGACCTGATGAGG 59.322 60.000 17.83 0.00 46.21 3.86
217 218 2.751166 CCTGATGAGGTCGTCAAACT 57.249 50.000 0.00 0.00 40.93 2.66
218 219 2.341257 CCTGATGAGGTCGTCAAACTG 58.659 52.381 0.00 2.20 40.93 3.16
219 220 2.289072 CCTGATGAGGTCGTCAAACTGT 60.289 50.000 0.00 0.00 40.93 3.55
220 221 2.733552 CTGATGAGGTCGTCAAACTGTG 59.266 50.000 0.00 0.00 40.93 3.66
221 222 2.102420 TGATGAGGTCGTCAAACTGTGT 59.898 45.455 0.00 0.00 39.19 3.72
222 223 3.319689 TGATGAGGTCGTCAAACTGTGTA 59.680 43.478 0.00 0.00 39.19 2.90
223 224 3.804786 TGAGGTCGTCAAACTGTGTAA 57.195 42.857 0.00 0.00 29.64 2.41
224 225 4.330944 TGAGGTCGTCAAACTGTGTAAT 57.669 40.909 0.00 0.00 29.64 1.89
225 226 4.699637 TGAGGTCGTCAAACTGTGTAATT 58.300 39.130 0.00 0.00 29.64 1.40
226 227 4.748102 TGAGGTCGTCAAACTGTGTAATTC 59.252 41.667 0.00 0.00 29.64 2.17
227 228 4.957296 AGGTCGTCAAACTGTGTAATTCT 58.043 39.130 0.00 0.00 0.00 2.40
228 229 4.750098 AGGTCGTCAAACTGTGTAATTCTG 59.250 41.667 0.00 0.00 0.00 3.02
229 230 4.455124 GTCGTCAAACTGTGTAATTCTGC 58.545 43.478 0.00 0.00 0.00 4.26
230 231 4.211374 GTCGTCAAACTGTGTAATTCTGCT 59.789 41.667 0.00 0.00 0.00 4.24
231 232 5.404366 GTCGTCAAACTGTGTAATTCTGCTA 59.596 40.000 0.00 0.00 0.00 3.49
232 233 5.633601 TCGTCAAACTGTGTAATTCTGCTAG 59.366 40.000 0.00 0.00 0.00 3.42
233 234 5.405571 CGTCAAACTGTGTAATTCTGCTAGT 59.594 40.000 0.00 0.00 0.00 2.57
234 235 6.584942 CGTCAAACTGTGTAATTCTGCTAGTA 59.415 38.462 0.00 0.00 0.00 1.82
235 236 7.201359 CGTCAAACTGTGTAATTCTGCTAGTAG 60.201 40.741 0.63 0.63 0.00 2.57
236 237 6.590292 TCAAACTGTGTAATTCTGCTAGTAGC 59.410 38.462 15.56 15.56 42.82 3.58
237 238 5.012328 ACTGTGTAATTCTGCTAGTAGCC 57.988 43.478 19.41 2.70 41.51 3.93
238 239 4.141914 ACTGTGTAATTCTGCTAGTAGCCC 60.142 45.833 19.41 0.00 41.51 5.19
239 240 3.181479 TGTGTAATTCTGCTAGTAGCCCG 60.181 47.826 19.41 10.53 41.51 6.13
240 241 2.364324 TGTAATTCTGCTAGTAGCCCGG 59.636 50.000 19.41 9.65 41.51 5.73
241 242 0.106894 AATTCTGCTAGTAGCCCGGC 59.893 55.000 19.41 0.00 41.51 6.13
242 243 0.760945 ATTCTGCTAGTAGCCCGGCT 60.761 55.000 18.05 18.05 41.51 5.52
243 244 0.106369 TTCTGCTAGTAGCCCGGCTA 60.106 55.000 19.41 15.59 41.51 3.93
251 252 2.044650 AGCCCGGCTACGTGAGTA 60.045 61.111 11.25 0.00 46.88 2.59
267 268 7.838771 ACGTGAGTAATACAAGTAATTTCCC 57.161 36.000 0.00 0.00 46.88 3.97
268 269 6.532657 ACGTGAGTAATACAAGTAATTTCCCG 59.467 38.462 0.00 0.00 46.88 5.14
269 270 6.509039 CGTGAGTAATACAAGTAATTTCCCGC 60.509 42.308 0.00 0.00 0.00 6.13
270 271 6.314400 GTGAGTAATACAAGTAATTTCCCGCA 59.686 38.462 0.00 0.00 0.00 5.69
271 272 6.879993 TGAGTAATACAAGTAATTTCCCGCAA 59.120 34.615 0.00 0.00 0.00 4.85
272 273 7.390996 TGAGTAATACAAGTAATTTCCCGCAAA 59.609 33.333 0.00 0.00 0.00 3.68
273 274 8.113173 AGTAATACAAGTAATTTCCCGCAAAA 57.887 30.769 0.00 0.00 0.00 2.44
274 275 8.578151 AGTAATACAAGTAATTTCCCGCAAAAA 58.422 29.630 0.00 0.00 0.00 1.94
385 386 6.086222 CCTTCCATTCTTACAACAATCAACG 58.914 40.000 0.00 0.00 0.00 4.10
442 444 5.866633 CAGAAGACTCATGTACCAAAGAGAC 59.133 44.000 7.64 2.96 32.59 3.36
444 446 5.808366 AGACTCATGTACCAAAGAGACAA 57.192 39.130 7.64 0.00 32.59 3.18
445 447 6.174720 AGACTCATGTACCAAAGAGACAAA 57.825 37.500 7.64 0.00 32.59 2.83
446 448 6.591935 AGACTCATGTACCAAAGAGACAAAA 58.408 36.000 7.64 0.00 32.59 2.44
447 449 7.227156 AGACTCATGTACCAAAGAGACAAAAT 58.773 34.615 7.64 0.00 32.59 1.82
466 487 0.179137 TTACTCGGTGCATCGCTCTG 60.179 55.000 16.22 7.20 0.00 3.35
520 541 9.273016 TCACTCTTATTGAAGTTCTGTTTTAGG 57.727 33.333 4.17 0.00 34.03 2.69
524 545 2.500229 TGAAGTTCTGTTTTAGGCCGG 58.500 47.619 0.00 0.00 0.00 6.13
564 585 4.452455 AGGAGCACAACTTATCGTTTTGAG 59.548 41.667 0.00 0.00 35.76 3.02
571 592 5.531287 ACAACTTATCGTTTTGAGCCTTCTT 59.469 36.000 0.00 0.00 32.27 2.52
587 608 4.156739 GCCTTCTTCGGATCATGTTTTTCT 59.843 41.667 0.00 0.00 0.00 2.52
588 609 5.335976 GCCTTCTTCGGATCATGTTTTTCTT 60.336 40.000 0.00 0.00 0.00 2.52
589 610 6.681777 CCTTCTTCGGATCATGTTTTTCTTT 58.318 36.000 0.00 0.00 0.00 2.52
590 611 7.147976 CCTTCTTCGGATCATGTTTTTCTTTT 58.852 34.615 0.00 0.00 0.00 2.27
591 612 7.653311 CCTTCTTCGGATCATGTTTTTCTTTTT 59.347 33.333 0.00 0.00 0.00 1.94
613 634 5.888691 TTTTTGAACACAGTACAGAAGCA 57.111 34.783 0.00 0.00 0.00 3.91
614 635 5.888691 TTTTGAACACAGTACAGAAGCAA 57.111 34.783 0.00 0.00 0.00 3.91
617 649 2.620251 ACACAGTACAGAAGCAAGCA 57.380 45.000 0.00 0.00 0.00 3.91
623 655 3.124806 CAGTACAGAAGCAAGCACTCATG 59.875 47.826 0.00 0.00 0.00 3.07
624 656 2.267174 ACAGAAGCAAGCACTCATGT 57.733 45.000 0.00 0.00 0.00 3.21
628 660 3.070018 AGAAGCAAGCACTCATGTACAC 58.930 45.455 0.00 0.00 0.00 2.90
630 662 0.179215 GCAAGCACTCATGTACACGC 60.179 55.000 0.00 0.00 0.00 5.34
631 663 1.147473 CAAGCACTCATGTACACGCA 58.853 50.000 0.00 0.00 0.00 5.24
632 664 1.136252 CAAGCACTCATGTACACGCAC 60.136 52.381 0.00 0.00 0.00 5.34
661 693 3.552132 TGGATAAGCCATACTCGCAAA 57.448 42.857 0.00 0.00 43.33 3.68
662 694 3.879998 TGGATAAGCCATACTCGCAAAA 58.120 40.909 0.00 0.00 43.33 2.44
663 695 4.265893 TGGATAAGCCATACTCGCAAAAA 58.734 39.130 0.00 0.00 43.33 1.94
715 747 1.619827 ACCACATCACCATTTTGGCAG 59.380 47.619 0.00 0.00 42.67 4.85
754 786 5.490213 CGAACATAGCTAACACGATTTTCC 58.510 41.667 0.00 0.00 0.00 3.13
777 813 5.112686 CCTAGAACAGAAGAAAGGGATTCG 58.887 45.833 0.00 0.00 43.15 3.34
779 815 1.726853 ACAGAAGAAAGGGATTCGCG 58.273 50.000 0.00 0.00 43.15 5.87
797 833 0.248907 CGATGTTCACGCCGTATCCT 60.249 55.000 0.00 0.00 0.00 3.24
833 869 1.000506 AGAAACGAAAGAGCGGCTGTA 59.999 47.619 7.50 0.00 35.12 2.74
834 870 1.796459 GAAACGAAAGAGCGGCTGTAA 59.204 47.619 7.50 0.00 35.12 2.41
835 871 1.145803 AACGAAAGAGCGGCTGTAAC 58.854 50.000 7.50 0.00 35.12 2.50
836 872 0.032952 ACGAAAGAGCGGCTGTAACA 59.967 50.000 7.50 0.00 35.12 2.41
837 873 1.144969 CGAAAGAGCGGCTGTAACAA 58.855 50.000 7.50 0.00 0.00 2.83
838 874 1.126846 CGAAAGAGCGGCTGTAACAAG 59.873 52.381 7.50 0.00 0.00 3.16
865 901 1.830477 ACCAGCAGCAAAGTCCAAAAA 59.170 42.857 0.00 0.00 0.00 1.94
918 954 4.080526 AGCGACCCAACTGAAACCTATTAT 60.081 41.667 0.00 0.00 0.00 1.28
919 955 5.129815 AGCGACCCAACTGAAACCTATTATA 59.870 40.000 0.00 0.00 0.00 0.98
920 956 5.995897 GCGACCCAACTGAAACCTATTATAT 59.004 40.000 0.00 0.00 0.00 0.86
921 957 6.073222 GCGACCCAACTGAAACCTATTATATG 60.073 42.308 0.00 0.00 0.00 1.78
923 959 7.713507 CGACCCAACTGAAACCTATTATATGAA 59.286 37.037 0.00 0.00 0.00 2.57
925 961 8.557450 ACCCAACTGAAACCTATTATATGAAGT 58.443 33.333 0.00 0.00 0.00 3.01
974 1010 3.515330 CATTCATGCCAGTTTCCTTCC 57.485 47.619 0.00 0.00 0.00 3.46
975 1011 2.978156 TTCATGCCAGTTTCCTTCCT 57.022 45.000 0.00 0.00 0.00 3.36
1016 1052 1.767759 CCCACACCTCCAATGATTCC 58.232 55.000 0.00 0.00 0.00 3.01
1056 1092 4.541705 TCCCTGTCCTAGAAATCTCTCTG 58.458 47.826 0.00 0.00 32.70 3.35
1058 1094 3.703556 CCTGTCCTAGAAATCTCTCTGCA 59.296 47.826 0.00 0.00 32.70 4.41
1127 1163 3.512516 GCATCGCCTGGCACTTCC 61.513 66.667 20.29 0.00 0.00 3.46
1139 1175 3.973516 ACTTCCGACGACGCTGCA 61.974 61.111 0.64 0.00 38.29 4.41
1197 1236 2.723143 CTGTACATCATCATCGCTGTCG 59.277 50.000 0.00 0.00 0.00 4.35
1315 1368 4.154347 CCACCTCGGGCTGAGCTC 62.154 72.222 18.14 6.82 43.82 4.09
1316 1369 3.073735 CACCTCGGGCTGAGCTCT 61.074 66.667 18.14 0.00 43.82 4.09
1763 1836 3.553922 GCGAATCGAAGGAGAGGATCATT 60.554 47.826 6.91 0.00 37.82 2.57
1859 1932 0.461339 ATGGTATGGTGGACGAACGC 60.461 55.000 0.00 0.00 0.00 4.84
1860 1933 2.162754 GGTATGGTGGACGAACGCG 61.163 63.158 3.53 3.53 44.79 6.01
1861 1934 1.153978 GTATGGTGGACGAACGCGA 60.154 57.895 15.93 0.00 41.64 5.87
1862 1935 0.733566 GTATGGTGGACGAACGCGAA 60.734 55.000 15.93 0.00 41.64 4.70
1863 1936 0.733566 TATGGTGGACGAACGCGAAC 60.734 55.000 15.93 5.01 41.64 3.95
1865 1938 3.759828 GTGGACGAACGCGAACGG 61.760 66.667 25.54 10.95 46.04 4.44
1877 1950 2.019951 CGAACGGGGTTCACTGTCG 61.020 63.158 8.97 0.00 42.05 4.35
2038 2111 1.552348 GCGACATATGCAGAGGACGC 61.552 60.000 24.18 24.18 38.23 5.19
2081 2154 2.192605 CCATTAAGTGGGTGCAGCC 58.807 57.895 28.15 28.15 44.79 4.85
2128 2201 4.515107 GCACAGTGCGCAGTAAAC 57.485 55.556 19.12 6.10 31.71 2.01
2136 2209 0.867746 TGCGCAGTAAACAGAAGCAG 59.132 50.000 5.66 0.00 0.00 4.24
2304 2381 6.813152 AGTTTGACAACAAGAAAATGACCAAG 59.187 34.615 0.00 0.00 37.32 3.61
2329 2406 4.774726 TGCATGCCCATAAACCTTTCTTTA 59.225 37.500 16.68 0.00 0.00 1.85
2353 2430 5.454966 TCCCCAGTTTCTTCTTAGCTTTTT 58.545 37.500 0.00 0.00 0.00 1.94
2379 2456 6.937436 TTGAGTTGGAGTTTCTTCTTAACC 57.063 37.500 0.00 0.00 0.00 2.85
2397 2474 6.433404 TCTTAACCCTAGATATTGAGGCGTAG 59.567 42.308 0.00 0.00 0.00 3.51
2399 2476 5.252586 ACCCTAGATATTGAGGCGTAGTA 57.747 43.478 0.00 0.00 0.00 1.82
2400 2477 5.828871 ACCCTAGATATTGAGGCGTAGTAT 58.171 41.667 0.00 0.00 0.00 2.12
2401 2478 6.966751 ACCCTAGATATTGAGGCGTAGTATA 58.033 40.000 0.00 0.00 0.00 1.47
2402 2479 6.827762 ACCCTAGATATTGAGGCGTAGTATAC 59.172 42.308 0.00 0.00 38.50 1.47
2415 2492 4.679662 CGTAGTATACACAACAAGAGGGG 58.320 47.826 5.50 0.00 43.24 4.79
2416 2493 3.629142 AGTATACACAACAAGAGGGGC 57.371 47.619 5.50 0.00 0.00 5.80
2418 2495 2.496899 ATACACAACAAGAGGGGCAG 57.503 50.000 0.00 0.00 0.00 4.85
2419 2496 0.400213 TACACAACAAGAGGGGCAGG 59.600 55.000 0.00 0.00 0.00 4.85
2420 2497 1.352622 ACACAACAAGAGGGGCAGGA 61.353 55.000 0.00 0.00 0.00 3.86
2422 2499 1.676967 CAACAAGAGGGGCAGGAGC 60.677 63.158 0.00 0.00 41.10 4.70
2423 2500 2.156098 AACAAGAGGGGCAGGAGCA 61.156 57.895 0.00 0.00 44.61 4.26
2537 3898 3.247648 ACGTGCTTGCACTTTTGTAGTAG 59.752 43.478 21.17 6.35 34.56 2.57
2538 3899 3.493129 CGTGCTTGCACTTTTGTAGTAGA 59.507 43.478 21.17 0.00 34.56 2.59
2539 3900 4.376413 CGTGCTTGCACTTTTGTAGTAGAG 60.376 45.833 21.17 0.12 34.56 2.43
2577 3938 2.226674 GGAGCTTTGCACCTGTCTTTAC 59.773 50.000 0.00 0.00 36.40 2.01
2594 3955 6.203915 TGTCTTTACGAGATTTTGCTGCTTTA 59.796 34.615 0.00 0.00 36.61 1.85
2629 3990 4.265073 AGTTGCAACTGATATCTCAACCC 58.735 43.478 30.66 0.00 37.98 4.11
2630 3991 3.998913 TGCAACTGATATCTCAACCCA 57.001 42.857 3.98 0.00 0.00 4.51
2631 3992 4.508551 TGCAACTGATATCTCAACCCAT 57.491 40.909 3.98 0.00 0.00 4.00
2682 4043 8.635765 AGAAATCTTCTTGCATTACAACCTTA 57.364 30.769 0.00 0.00 36.36 2.69
2745 4106 9.620259 AATAAACTTTAGCCCATTTGTTCAAAA 57.380 25.926 2.11 0.00 0.00 2.44
2750 4111 4.058721 AGCCCATTTGTTCAAAAGTCAC 57.941 40.909 2.11 0.00 0.00 3.67
2754 4115 3.067461 CCATTTGTTCAAAAGTCACCCGA 59.933 43.478 2.11 0.00 0.00 5.14
2777 4138 1.069090 TCTTTTGAGAGCGCACCGT 59.931 52.632 11.47 0.00 0.00 4.83
2778 4139 1.205064 CTTTTGAGAGCGCACCGTG 59.795 57.895 11.47 0.00 0.00 4.94
2850 4221 1.004440 GGAGCTGCGTCCAAAGTCT 60.004 57.895 11.62 0.00 36.51 3.24
2877 4249 5.494390 TTAAAAAGGTCCCTACTGTCCTC 57.506 43.478 0.00 0.00 0.00 3.71
2922 4295 1.035385 CGGCCAACTGGTTTATCCCC 61.035 60.000 2.24 0.00 37.57 4.81
2923 4296 0.686441 GGCCAACTGGTTTATCCCCC 60.686 60.000 0.00 0.00 37.57 5.40
2934 4307 1.868713 TTATCCCCCAGAGCACGTTA 58.131 50.000 0.00 0.00 0.00 3.18
2968 4341 1.790387 GCGTGTGGCAGAATGTCTC 59.210 57.895 0.00 0.00 44.57 3.36
3024 4409 1.510480 GCGGGGCTCACATTATCAGC 61.510 60.000 0.00 0.00 0.00 4.26
3033 4418 4.264253 CTCACATTATCAGCAAGTTCCCA 58.736 43.478 0.00 0.00 0.00 4.37
3066 4451 4.689612 ACCACTTGAGTGTGACTATGTT 57.310 40.909 10.03 0.00 44.21 2.71
3069 4454 4.449068 CCACTTGAGTGTGACTATGTTGAC 59.551 45.833 10.03 0.00 44.21 3.18
3072 4457 4.257267 TGAGTGTGACTATGTTGACCAG 57.743 45.455 0.00 0.00 0.00 4.00
3120 4505 9.912634 AATGTTGTTTGTTTTATCTACCAGATG 57.087 29.630 0.00 0.00 35.37 2.90
3121 4506 8.684386 TGTTGTTTGTTTTATCTACCAGATGA 57.316 30.769 0.00 0.00 35.37 2.92
3122 4507 9.126151 TGTTGTTTGTTTTATCTACCAGATGAA 57.874 29.630 0.00 0.00 35.37 2.57
3123 4508 9.959749 GTTGTTTGTTTTATCTACCAGATGAAA 57.040 29.630 2.90 2.90 37.71 2.69
3125 4510 9.567776 TGTTTGTTTTATCTACCAGATGAAAGA 57.432 29.630 6.41 3.59 39.73 2.52
3136 4521 9.231297 TCTACCAGATGAAAGATTAAAGTTTGG 57.769 33.333 0.00 0.00 0.00 3.28
3137 4522 6.691508 ACCAGATGAAAGATTAAAGTTTGGC 58.308 36.000 0.00 0.00 0.00 4.52
3138 4523 6.494835 ACCAGATGAAAGATTAAAGTTTGGCT 59.505 34.615 0.00 0.00 0.00 4.75
3139 4524 7.015584 ACCAGATGAAAGATTAAAGTTTGGCTT 59.984 33.333 0.00 0.00 39.52 4.35
3140 4525 7.543520 CCAGATGAAAGATTAAAGTTTGGCTTC 59.456 37.037 0.00 0.00 36.17 3.86
3141 4526 7.272084 CAGATGAAAGATTAAAGTTTGGCTTCG 59.728 37.037 0.00 0.00 36.17 3.79
3142 4527 6.627395 TGAAAGATTAAAGTTTGGCTTCGA 57.373 33.333 0.00 0.00 36.17 3.71
3143 4528 7.033530 TGAAAGATTAAAGTTTGGCTTCGAA 57.966 32.000 0.00 0.00 36.17 3.71
3144 4529 6.915843 TGAAAGATTAAAGTTTGGCTTCGAAC 59.084 34.615 0.00 0.00 36.17 3.95
3145 4530 5.372547 AGATTAAAGTTTGGCTTCGAACC 57.627 39.130 0.00 1.55 36.17 3.62
3146 4531 4.825085 AGATTAAAGTTTGGCTTCGAACCA 59.175 37.500 13.34 13.34 36.17 3.67
3147 4532 4.985538 TTAAAGTTTGGCTTCGAACCAA 57.014 36.364 20.99 20.99 45.37 3.67
3152 4537 2.859165 TTGGCTTCGAACCAAGATCT 57.141 45.000 20.99 0.00 42.23 2.75
3153 4538 2.859165 TGGCTTCGAACCAAGATCTT 57.141 45.000 14.54 0.88 33.12 2.40
3154 4539 3.140325 TGGCTTCGAACCAAGATCTTT 57.860 42.857 4.86 0.00 33.12 2.52
3155 4540 4.280436 TGGCTTCGAACCAAGATCTTTA 57.720 40.909 4.86 0.00 33.12 1.85
3156 4541 4.843728 TGGCTTCGAACCAAGATCTTTAT 58.156 39.130 4.86 0.00 33.12 1.40
3157 4542 4.635765 TGGCTTCGAACCAAGATCTTTATG 59.364 41.667 4.86 0.00 33.12 1.90
3158 4543 4.636206 GGCTTCGAACCAAGATCTTTATGT 59.364 41.667 4.86 0.61 0.00 2.29
3159 4544 5.447818 GGCTTCGAACCAAGATCTTTATGTG 60.448 44.000 4.86 0.00 0.00 3.21
3160 4545 5.447818 GCTTCGAACCAAGATCTTTATGTGG 60.448 44.000 4.86 7.05 0.00 4.17
3161 4546 5.160607 TCGAACCAAGATCTTTATGTGGT 57.839 39.130 4.86 7.77 0.00 4.16
3162 4547 6.288941 TCGAACCAAGATCTTTATGTGGTA 57.711 37.500 14.92 0.00 0.00 3.25
3163 4548 6.103997 TCGAACCAAGATCTTTATGTGGTAC 58.896 40.000 14.92 0.00 0.00 3.34
3164 4549 6.070995 TCGAACCAAGATCTTTATGTGGTACT 60.071 38.462 14.92 2.55 0.00 2.73
3165 4550 6.255887 CGAACCAAGATCTTTATGTGGTACTC 59.744 42.308 14.92 9.79 0.00 2.59
3166 4551 5.990668 ACCAAGATCTTTATGTGGTACTCC 58.009 41.667 13.31 0.00 0.00 3.85
3167 4552 5.104485 ACCAAGATCTTTATGTGGTACTCCC 60.104 44.000 13.31 0.00 0.00 4.30
3168 4553 5.131142 CCAAGATCTTTATGTGGTACTCCCT 59.869 44.000 4.86 0.00 0.00 4.20
3169 4554 6.284459 CAAGATCTTTATGTGGTACTCCCTC 58.716 44.000 4.86 0.00 0.00 4.30
3170 4555 4.902448 AGATCTTTATGTGGTACTCCCTCC 59.098 45.833 0.00 0.00 0.00 4.30
3171 4556 4.348020 TCTTTATGTGGTACTCCCTCCT 57.652 45.455 0.00 0.00 0.00 3.69
3172 4557 4.695606 TCTTTATGTGGTACTCCCTCCTT 58.304 43.478 0.00 0.00 0.00 3.36
3173 4558 5.098663 TCTTTATGTGGTACTCCCTCCTTT 58.901 41.667 0.00 0.00 0.00 3.11
3174 4559 5.550403 TCTTTATGTGGTACTCCCTCCTTTT 59.450 40.000 0.00 0.00 0.00 2.27
3175 4560 5.853572 TTATGTGGTACTCCCTCCTTTTT 57.146 39.130 0.00 0.00 0.00 1.94
3176 4561 6.956102 TTATGTGGTACTCCCTCCTTTTTA 57.044 37.500 0.00 0.00 0.00 1.52
3177 4562 7.519347 TTATGTGGTACTCCCTCCTTTTTAT 57.481 36.000 0.00 0.00 0.00 1.40
3178 4563 5.853572 TGTGGTACTCCCTCCTTTTTATT 57.146 39.130 0.00 0.00 0.00 1.40
3179 4564 6.208840 TGTGGTACTCCCTCCTTTTTATTT 57.791 37.500 0.00 0.00 0.00 1.40
3180 4565 7.332433 TGTGGTACTCCCTCCTTTTTATTTA 57.668 36.000 0.00 0.00 0.00 1.40
3181 4566 7.170277 TGTGGTACTCCCTCCTTTTTATTTAC 58.830 38.462 0.00 0.00 0.00 2.01
3182 4567 7.017850 TGTGGTACTCCCTCCTTTTTATTTACT 59.982 37.037 0.00 0.00 0.00 2.24
3183 4568 7.551974 GTGGTACTCCCTCCTTTTTATTTACTC 59.448 40.741 0.00 0.00 0.00 2.59
3184 4569 7.052873 GGTACTCCCTCCTTTTTATTTACTCC 58.947 42.308 0.00 0.00 0.00 3.85
3185 4570 5.742063 ACTCCCTCCTTTTTATTTACTCCG 58.258 41.667 0.00 0.00 0.00 4.63
3186 4571 4.520179 TCCCTCCTTTTTATTTACTCCGC 58.480 43.478 0.00 0.00 0.00 5.54
3187 4572 4.019141 TCCCTCCTTTTTATTTACTCCGCA 60.019 41.667 0.00 0.00 0.00 5.69
3188 4573 4.887655 CCCTCCTTTTTATTTACTCCGCAT 59.112 41.667 0.00 0.00 0.00 4.73
3189 4574 6.059484 CCCTCCTTTTTATTTACTCCGCATA 58.941 40.000 0.00 0.00 0.00 3.14
3190 4575 6.715264 CCCTCCTTTTTATTTACTCCGCATAT 59.285 38.462 0.00 0.00 0.00 1.78
3191 4576 7.230712 CCCTCCTTTTTATTTACTCCGCATATT 59.769 37.037 0.00 0.00 0.00 1.28
3192 4577 9.280174 CCTCCTTTTTATTTACTCCGCATATTA 57.720 33.333 0.00 0.00 0.00 0.98
3200 4585 7.948278 ATTTACTCCGCATATTAGAGTTGAC 57.052 36.000 4.78 0.00 41.09 3.18
3201 4586 6.710597 TTACTCCGCATATTAGAGTTGACT 57.289 37.500 4.78 0.00 41.09 3.41
3202 4587 4.938080 ACTCCGCATATTAGAGTTGACTG 58.062 43.478 0.00 0.00 37.60 3.51
3203 4588 4.645136 ACTCCGCATATTAGAGTTGACTGA 59.355 41.667 0.00 0.00 37.60 3.41
3204 4589 5.127194 ACTCCGCATATTAGAGTTGACTGAA 59.873 40.000 0.00 0.00 37.60 3.02
3205 4590 5.592054 TCCGCATATTAGAGTTGACTGAAG 58.408 41.667 0.00 0.00 0.00 3.02
3206 4591 5.127194 TCCGCATATTAGAGTTGACTGAAGT 59.873 40.000 0.00 0.00 0.00 3.01
3207 4592 5.460419 CCGCATATTAGAGTTGACTGAAGTC 59.540 44.000 3.41 3.41 44.97 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.842531 TCAACAGATTGATAGCCTCCAA 57.157 40.909 0.00 0.00 40.01 3.53
1 2 4.471025 TCTTCAACAGATTGATAGCCTCCA 59.529 41.667 0.00 0.00 44.36 3.86
2 3 5.028549 TCTTCAACAGATTGATAGCCTCC 57.971 43.478 0.00 0.00 44.36 4.30
3 4 5.526846 CCTTCTTCAACAGATTGATAGCCTC 59.473 44.000 0.00 0.00 44.36 4.70
5 6 4.578105 CCCTTCTTCAACAGATTGATAGCC 59.422 45.833 0.00 0.00 44.36 3.93
6 7 5.431765 TCCCTTCTTCAACAGATTGATAGC 58.568 41.667 0.00 0.00 44.36 2.97
8 9 6.874278 TCTCCCTTCTTCAACAGATTGATA 57.126 37.500 0.00 0.00 44.36 2.15
11 12 6.349944 CCATTTCTCCCTTCTTCAACAGATTG 60.350 42.308 0.00 0.00 37.14 2.67
12 13 5.713861 CCATTTCTCCCTTCTTCAACAGATT 59.286 40.000 0.00 0.00 0.00 2.40
13 14 5.014544 TCCATTTCTCCCTTCTTCAACAGAT 59.985 40.000 0.00 0.00 0.00 2.90
14 15 4.350816 TCCATTTCTCCCTTCTTCAACAGA 59.649 41.667 0.00 0.00 0.00 3.41
15 16 4.655963 TCCATTTCTCCCTTCTTCAACAG 58.344 43.478 0.00 0.00 0.00 3.16
16 17 4.722526 TCCATTTCTCCCTTCTTCAACA 57.277 40.909 0.00 0.00 0.00 3.33
17 18 6.653989 TCTATCCATTTCTCCCTTCTTCAAC 58.346 40.000 0.00 0.00 0.00 3.18
18 19 6.891306 TCTATCCATTTCTCCCTTCTTCAA 57.109 37.500 0.00 0.00 0.00 2.69
19 20 6.848631 AGATCTATCCATTTCTCCCTTCTTCA 59.151 38.462 0.00 0.00 0.00 3.02
20 21 7.160726 CAGATCTATCCATTTCTCCCTTCTTC 58.839 42.308 0.00 0.00 0.00 2.87
21 22 6.465607 GCAGATCTATCCATTTCTCCCTTCTT 60.466 42.308 0.00 0.00 0.00 2.52
22 23 5.012975 GCAGATCTATCCATTTCTCCCTTCT 59.987 44.000 0.00 0.00 0.00 2.85
23 24 5.244755 GCAGATCTATCCATTTCTCCCTTC 58.755 45.833 0.00 0.00 0.00 3.46
24 25 4.262808 CGCAGATCTATCCATTTCTCCCTT 60.263 45.833 0.00 0.00 0.00 3.95
25 26 3.260380 CGCAGATCTATCCATTTCTCCCT 59.740 47.826 0.00 0.00 0.00 4.20
26 27 3.259374 TCGCAGATCTATCCATTTCTCCC 59.741 47.826 0.00 0.00 0.00 4.30
27 28 4.527509 TCGCAGATCTATCCATTTCTCC 57.472 45.455 0.00 0.00 0.00 3.71
28 29 5.292765 TGTTCGCAGATCTATCCATTTCTC 58.707 41.667 0.00 0.00 35.04 2.87
29 30 5.282055 TGTTCGCAGATCTATCCATTTCT 57.718 39.130 0.00 0.00 35.04 2.52
41 42 8.489025 CATGAACCATGAAACTGTTCGCAGAT 62.489 42.308 0.00 0.00 44.44 2.90
42 43 7.268013 CATGAACCATGAAACTGTTCGCAGA 62.268 44.000 0.00 0.00 44.44 4.26
43 44 5.137065 CATGAACCATGAAACTGTTCGCAG 61.137 45.833 0.00 0.00 45.71 5.18
44 45 2.293170 TGAACCATGAAACTGTTCGCA 58.707 42.857 0.00 0.00 40.92 5.10
45 46 3.058293 TCATGAACCATGAAACTGTTCGC 60.058 43.478 7.13 0.00 46.17 4.70
46 47 4.747540 TCATGAACCATGAAACTGTTCG 57.252 40.909 7.13 0.00 46.17 3.95
56 57 9.811995 ATGAGTATTTTGATTTCATGAACCATG 57.188 29.630 7.89 0.74 42.60 3.66
57 58 9.811995 CATGAGTATTTTGATTTCATGAACCAT 57.188 29.630 7.89 0.00 44.85 3.55
58 59 8.252417 CCATGAGTATTTTGATTTCATGAACCA 58.748 33.333 7.89 6.63 44.85 3.67
59 60 8.469200 TCCATGAGTATTTTGATTTCATGAACC 58.531 33.333 7.89 3.87 44.85 3.62
62 63 9.411189 TGATCCATGAGTATTTTGATTTCATGA 57.589 29.630 12.82 0.00 44.85 3.07
65 66 8.183536 CGTTGATCCATGAGTATTTTGATTTCA 58.816 33.333 0.00 0.00 0.00 2.69
66 67 8.397906 TCGTTGATCCATGAGTATTTTGATTTC 58.602 33.333 0.00 0.00 0.00 2.17
67 68 8.279970 TCGTTGATCCATGAGTATTTTGATTT 57.720 30.769 0.00 0.00 0.00 2.17
68 69 7.864108 TCGTTGATCCATGAGTATTTTGATT 57.136 32.000 0.00 0.00 0.00 2.57
69 70 7.864108 TTCGTTGATCCATGAGTATTTTGAT 57.136 32.000 0.00 0.00 0.00 2.57
70 71 7.680442 TTTCGTTGATCCATGAGTATTTTGA 57.320 32.000 0.00 0.00 0.00 2.69
71 72 8.915871 AATTTCGTTGATCCATGAGTATTTTG 57.084 30.769 0.00 0.00 0.00 2.44
72 73 8.960591 AGAATTTCGTTGATCCATGAGTATTTT 58.039 29.630 0.00 0.00 0.00 1.82
73 74 8.511604 AGAATTTCGTTGATCCATGAGTATTT 57.488 30.769 0.00 0.00 0.00 1.40
74 75 8.400947 CAAGAATTTCGTTGATCCATGAGTATT 58.599 33.333 0.00 0.00 0.00 1.89
75 76 7.554118 ACAAGAATTTCGTTGATCCATGAGTAT 59.446 33.333 12.51 0.00 0.00 2.12
76 77 6.878923 ACAAGAATTTCGTTGATCCATGAGTA 59.121 34.615 12.51 0.00 0.00 2.59
77 78 5.707298 ACAAGAATTTCGTTGATCCATGAGT 59.293 36.000 12.51 0.00 0.00 3.41
78 79 6.187125 ACAAGAATTTCGTTGATCCATGAG 57.813 37.500 12.51 0.00 0.00 2.90
79 80 7.864108 ATACAAGAATTTCGTTGATCCATGA 57.136 32.000 12.51 0.00 0.00 3.07
80 81 9.438291 GTAATACAAGAATTTCGTTGATCCATG 57.562 33.333 12.51 0.00 0.00 3.66
81 82 9.396022 AGTAATACAAGAATTTCGTTGATCCAT 57.604 29.630 12.51 2.54 0.00 3.41
82 83 8.786826 AGTAATACAAGAATTTCGTTGATCCA 57.213 30.769 12.51 0.00 0.00 3.41
83 84 8.879759 TGAGTAATACAAGAATTTCGTTGATCC 58.120 33.333 12.51 0.00 0.00 3.36
84 85 9.690434 GTGAGTAATACAAGAATTTCGTTGATC 57.310 33.333 12.51 0.00 0.00 2.92
85 86 9.214957 TGTGAGTAATACAAGAATTTCGTTGAT 57.785 29.630 12.51 4.79 0.00 2.57
86 87 8.596271 TGTGAGTAATACAAGAATTTCGTTGA 57.404 30.769 12.51 2.06 0.00 3.18
87 88 9.825972 AATGTGAGTAATACAAGAATTTCGTTG 57.174 29.630 0.00 6.90 0.00 4.10
105 106 9.507329 AGTGTTTTGACTATGATAAATGTGAGT 57.493 29.630 0.00 0.00 0.00 3.41
106 107 9.764870 CAGTGTTTTGACTATGATAAATGTGAG 57.235 33.333 0.00 0.00 0.00 3.51
107 108 9.283768 ACAGTGTTTTGACTATGATAAATGTGA 57.716 29.630 0.00 0.00 0.00 3.58
112 113 8.726988 GGCTTACAGTGTTTTGACTATGATAAA 58.273 33.333 0.00 0.00 0.00 1.40
113 114 7.880713 TGGCTTACAGTGTTTTGACTATGATAA 59.119 33.333 0.00 0.00 0.00 1.75
114 115 7.390823 TGGCTTACAGTGTTTTGACTATGATA 58.609 34.615 0.00 0.00 0.00 2.15
115 116 6.237901 TGGCTTACAGTGTTTTGACTATGAT 58.762 36.000 0.00 0.00 0.00 2.45
116 117 5.616270 TGGCTTACAGTGTTTTGACTATGA 58.384 37.500 0.00 0.00 0.00 2.15
117 118 5.940192 TGGCTTACAGTGTTTTGACTATG 57.060 39.130 0.00 0.00 0.00 2.23
118 119 7.014230 ACAAATGGCTTACAGTGTTTTGACTAT 59.986 33.333 18.20 0.39 29.60 2.12
119 120 6.320164 ACAAATGGCTTACAGTGTTTTGACTA 59.680 34.615 18.20 0.00 29.60 2.59
120 121 5.127031 ACAAATGGCTTACAGTGTTTTGACT 59.873 36.000 18.20 0.00 29.60 3.41
121 122 5.348164 ACAAATGGCTTACAGTGTTTTGAC 58.652 37.500 18.20 5.96 29.60 3.18
122 123 5.590530 ACAAATGGCTTACAGTGTTTTGA 57.409 34.783 18.20 0.00 29.60 2.69
123 124 5.006552 CCAACAAATGGCTTACAGTGTTTTG 59.993 40.000 0.00 7.67 43.80 2.44
124 125 5.115480 CCAACAAATGGCTTACAGTGTTTT 58.885 37.500 0.00 0.00 43.80 2.43
125 126 4.692228 CCAACAAATGGCTTACAGTGTTT 58.308 39.130 0.00 0.00 43.80 2.83
126 127 4.320608 CCAACAAATGGCTTACAGTGTT 57.679 40.909 0.00 0.00 43.80 3.32
138 139 7.816031 AGTTCTATCAAAAGATGCCAACAAATG 59.184 33.333 0.00 0.00 0.00 2.32
139 140 7.899973 AGTTCTATCAAAAGATGCCAACAAAT 58.100 30.769 0.00 0.00 0.00 2.32
140 141 7.288810 AGTTCTATCAAAAGATGCCAACAAA 57.711 32.000 0.00 0.00 0.00 2.83
141 142 6.899393 AGTTCTATCAAAAGATGCCAACAA 57.101 33.333 0.00 0.00 0.00 2.83
142 143 6.092122 CGTAGTTCTATCAAAAGATGCCAACA 59.908 38.462 0.00 0.00 0.00 3.33
143 144 6.456988 CCGTAGTTCTATCAAAAGATGCCAAC 60.457 42.308 0.00 0.00 0.00 3.77
144 145 5.584649 CCGTAGTTCTATCAAAAGATGCCAA 59.415 40.000 0.00 0.00 0.00 4.52
145 146 5.116180 CCGTAGTTCTATCAAAAGATGCCA 58.884 41.667 0.00 0.00 0.00 4.92
146 147 4.511826 CCCGTAGTTCTATCAAAAGATGCC 59.488 45.833 0.00 0.00 0.00 4.40
147 148 5.116882 ACCCGTAGTTCTATCAAAAGATGC 58.883 41.667 0.00 0.00 0.00 3.91
148 149 5.459107 CGACCCGTAGTTCTATCAAAAGATG 59.541 44.000 0.00 0.00 0.00 2.90
149 150 5.126707 ACGACCCGTAGTTCTATCAAAAGAT 59.873 40.000 0.00 0.00 38.73 2.40
150 151 4.460382 ACGACCCGTAGTTCTATCAAAAGA 59.540 41.667 0.00 0.00 38.73 2.52
151 152 4.741342 ACGACCCGTAGTTCTATCAAAAG 58.259 43.478 0.00 0.00 38.73 2.27
152 153 4.789012 ACGACCCGTAGTTCTATCAAAA 57.211 40.909 0.00 0.00 38.73 2.44
153 154 4.096382 GGTACGACCCGTAGTTCTATCAAA 59.904 45.833 0.00 0.00 43.06 2.69
154 155 3.627577 GGTACGACCCGTAGTTCTATCAA 59.372 47.826 0.00 0.00 43.06 2.57
155 156 3.206150 GGTACGACCCGTAGTTCTATCA 58.794 50.000 0.00 0.00 43.06 2.15
156 157 3.206150 TGGTACGACCCGTAGTTCTATC 58.794 50.000 0.00 0.00 43.06 2.08
157 158 3.281727 TGGTACGACCCGTAGTTCTAT 57.718 47.619 0.00 0.00 43.06 1.98
158 159 2.779755 TGGTACGACCCGTAGTTCTA 57.220 50.000 0.00 0.00 43.06 2.10
159 160 1.747355 CATGGTACGACCCGTAGTTCT 59.253 52.381 0.00 0.00 43.06 3.01
160 161 1.202336 CCATGGTACGACCCGTAGTTC 60.202 57.143 2.57 0.00 43.06 3.01
161 162 0.819582 CCATGGTACGACCCGTAGTT 59.180 55.000 2.57 0.00 43.06 2.24
162 163 0.323725 ACCATGGTACGACCCGTAGT 60.324 55.000 18.10 0.00 43.06 2.73
163 164 0.101759 CACCATGGTACGACCCGTAG 59.898 60.000 19.28 0.00 43.06 3.51
164 165 0.611618 ACACCATGGTACGACCCGTA 60.612 55.000 19.28 0.00 41.54 4.02
165 166 1.909781 ACACCATGGTACGACCCGT 60.910 57.895 19.28 6.50 44.35 5.28
166 167 1.447140 CACACCATGGTACGACCCG 60.447 63.158 19.28 5.76 37.50 5.28
167 168 1.078708 CCACACCATGGTACGACCC 60.079 63.158 19.28 0.00 44.46 4.46
168 169 4.609995 CCACACCATGGTACGACC 57.390 61.111 19.28 0.00 44.46 4.79
176 177 0.812811 CAGATCCGAGCCACACCATG 60.813 60.000 0.00 0.00 0.00 3.66
177 178 1.524002 CAGATCCGAGCCACACCAT 59.476 57.895 0.00 0.00 0.00 3.55
178 179 2.659063 CCAGATCCGAGCCACACCA 61.659 63.158 0.00 0.00 0.00 4.17
179 180 2.187946 CCAGATCCGAGCCACACC 59.812 66.667 0.00 0.00 0.00 4.16
180 181 1.153549 GTCCAGATCCGAGCCACAC 60.154 63.158 0.00 0.00 0.00 3.82
181 182 2.359169 GGTCCAGATCCGAGCCACA 61.359 63.158 0.00 0.00 0.00 4.17
182 183 2.060980 AGGTCCAGATCCGAGCCAC 61.061 63.158 6.09 0.00 0.00 5.01
183 184 2.060383 CAGGTCCAGATCCGAGCCA 61.060 63.158 6.09 0.00 0.00 4.75
184 185 1.118356 ATCAGGTCCAGATCCGAGCC 61.118 60.000 6.09 0.00 0.00 4.70
185 186 0.033228 CATCAGGTCCAGATCCGAGC 59.967 60.000 0.00 2.17 0.00 5.03
186 187 1.612950 CTCATCAGGTCCAGATCCGAG 59.387 57.143 0.00 0.00 0.00 4.63
187 188 1.697284 CTCATCAGGTCCAGATCCGA 58.303 55.000 0.00 0.00 0.00 4.55
188 189 0.678395 CCTCATCAGGTCCAGATCCG 59.322 60.000 0.00 0.00 34.60 4.18
198 199 2.289072 ACAGTTTGACGACCTCATCAGG 60.289 50.000 0.00 0.00 46.87 3.86
199 200 2.733552 CACAGTTTGACGACCTCATCAG 59.266 50.000 0.00 0.00 0.00 2.90
200 201 2.102420 ACACAGTTTGACGACCTCATCA 59.898 45.455 0.00 0.00 0.00 3.07
201 202 2.755650 ACACAGTTTGACGACCTCATC 58.244 47.619 0.00 0.00 0.00 2.92
202 203 2.910688 ACACAGTTTGACGACCTCAT 57.089 45.000 0.00 0.00 0.00 2.90
203 204 3.804786 TTACACAGTTTGACGACCTCA 57.195 42.857 0.00 0.00 0.00 3.86
204 205 4.989168 AGAATTACACAGTTTGACGACCTC 59.011 41.667 0.00 0.00 0.00 3.85
205 206 4.750098 CAGAATTACACAGTTTGACGACCT 59.250 41.667 0.00 0.00 0.00 3.85
206 207 4.610680 GCAGAATTACACAGTTTGACGACC 60.611 45.833 0.00 0.00 0.00 4.79
207 208 4.211374 AGCAGAATTACACAGTTTGACGAC 59.789 41.667 0.00 0.00 0.00 4.34
208 209 4.377021 AGCAGAATTACACAGTTTGACGA 58.623 39.130 0.00 0.00 0.00 4.20
209 210 4.732285 AGCAGAATTACACAGTTTGACG 57.268 40.909 0.00 0.00 0.00 4.35
210 211 6.787085 ACTAGCAGAATTACACAGTTTGAC 57.213 37.500 0.00 0.00 0.00 3.18
211 212 6.590292 GCTACTAGCAGAATTACACAGTTTGA 59.410 38.462 2.96 0.00 41.89 2.69
212 213 6.183360 GGCTACTAGCAGAATTACACAGTTTG 60.183 42.308 10.27 0.00 44.75 2.93
213 214 5.875359 GGCTACTAGCAGAATTACACAGTTT 59.125 40.000 10.27 0.00 44.75 2.66
214 215 5.420409 GGCTACTAGCAGAATTACACAGTT 58.580 41.667 10.27 0.00 44.75 3.16
215 216 4.141914 GGGCTACTAGCAGAATTACACAGT 60.142 45.833 10.27 0.00 44.75 3.55
216 217 4.372656 GGGCTACTAGCAGAATTACACAG 58.627 47.826 10.27 0.00 44.75 3.66
217 218 3.181479 CGGGCTACTAGCAGAATTACACA 60.181 47.826 10.27 0.00 44.75 3.72
218 219 3.381949 CGGGCTACTAGCAGAATTACAC 58.618 50.000 10.27 0.00 44.75 2.90
219 220 2.364324 CCGGGCTACTAGCAGAATTACA 59.636 50.000 10.27 0.00 44.75 2.41
220 221 2.866855 GCCGGGCTACTAGCAGAATTAC 60.867 54.545 12.87 0.00 44.75 1.89
221 222 1.343465 GCCGGGCTACTAGCAGAATTA 59.657 52.381 12.87 0.00 44.75 1.40
222 223 0.106894 GCCGGGCTACTAGCAGAATT 59.893 55.000 12.87 0.00 44.75 2.17
223 224 0.760945 AGCCGGGCTACTAGCAGAAT 60.761 55.000 22.47 0.00 44.75 2.40
224 225 0.106369 TAGCCGGGCTACTAGCAGAA 60.106 55.000 24.51 0.97 44.75 3.02
225 226 1.535190 TAGCCGGGCTACTAGCAGA 59.465 57.895 24.51 1.79 44.75 4.26
226 227 4.175988 TAGCCGGGCTACTAGCAG 57.824 61.111 24.51 3.49 44.75 4.24
233 234 0.394216 TTACTCACGTAGCCGGGCTA 60.394 55.000 24.51 24.51 40.44 3.93
234 235 1.041447 ATTACTCACGTAGCCGGGCT 61.041 55.000 26.95 26.95 43.41 5.19
235 236 0.670162 TATTACTCACGTAGCCGGGC 59.330 55.000 12.11 12.11 37.42 6.13
236 237 1.677576 TGTATTACTCACGTAGCCGGG 59.322 52.381 2.18 0.00 39.43 5.73
237 238 3.181493 ACTTGTATTACTCACGTAGCCGG 60.181 47.826 0.00 0.00 38.78 6.13
238 239 4.025015 ACTTGTATTACTCACGTAGCCG 57.975 45.455 0.00 0.00 40.83 5.52
239 240 7.998753 AATTACTTGTATTACTCACGTAGCC 57.001 36.000 0.00 0.00 0.00 3.93
240 241 8.538039 GGAAATTACTTGTATTACTCACGTAGC 58.462 37.037 0.00 0.00 0.00 3.58
241 242 9.028185 GGGAAATTACTTGTATTACTCACGTAG 57.972 37.037 0.00 0.00 0.00 3.51
242 243 7.701924 CGGGAAATTACTTGTATTACTCACGTA 59.298 37.037 0.00 0.00 0.00 3.57
243 244 6.532657 CGGGAAATTACTTGTATTACTCACGT 59.467 38.462 0.00 0.00 0.00 4.49
244 245 6.509039 GCGGGAAATTACTTGTATTACTCACG 60.509 42.308 0.00 0.00 0.00 4.35
245 246 6.314400 TGCGGGAAATTACTTGTATTACTCAC 59.686 38.462 0.00 0.00 0.00 3.51
246 247 6.408035 TGCGGGAAATTACTTGTATTACTCA 58.592 36.000 0.00 0.00 0.00 3.41
247 248 6.913873 TGCGGGAAATTACTTGTATTACTC 57.086 37.500 0.00 0.00 0.00 2.59
248 249 7.690952 TTTGCGGGAAATTACTTGTATTACT 57.309 32.000 0.00 0.00 0.00 2.24
249 250 8.745464 TTTTTGCGGGAAATTACTTGTATTAC 57.255 30.769 0.00 0.00 0.00 1.89
346 347 3.035363 TGGAAGGCACGGAATACAGATA 58.965 45.455 0.00 0.00 0.00 1.98
350 351 2.238646 AGAATGGAAGGCACGGAATACA 59.761 45.455 0.00 0.00 0.00 2.29
357 358 2.811431 TGTTGTAAGAATGGAAGGCACG 59.189 45.455 0.00 0.00 0.00 5.34
358 359 4.846779 TTGTTGTAAGAATGGAAGGCAC 57.153 40.909 0.00 0.00 0.00 5.01
359 360 5.076182 TGATTGTTGTAAGAATGGAAGGCA 58.924 37.500 0.00 0.00 0.00 4.75
360 361 5.643379 TGATTGTTGTAAGAATGGAAGGC 57.357 39.130 0.00 0.00 0.00 4.35
405 406 5.311265 TGAGTCTTCTGATTGATTGTGCTT 58.689 37.500 0.00 0.00 0.00 3.91
407 408 5.123502 ACATGAGTCTTCTGATTGATTGTGC 59.876 40.000 0.00 0.00 0.00 4.57
408 409 6.738832 ACATGAGTCTTCTGATTGATTGTG 57.261 37.500 0.00 0.00 0.00 3.33
410 411 6.820152 TGGTACATGAGTCTTCTGATTGATTG 59.180 38.462 0.00 0.00 0.00 2.67
417 419 5.775195 TCTCTTTGGTACATGAGTCTTCTGA 59.225 40.000 0.00 0.00 39.26 3.27
442 444 2.095853 AGCGATGCACCGAGTAATTTTG 59.904 45.455 3.51 0.00 0.00 2.44
444 446 1.933853 GAGCGATGCACCGAGTAATTT 59.066 47.619 3.51 0.00 0.00 1.82
445 447 1.137086 AGAGCGATGCACCGAGTAATT 59.863 47.619 3.51 0.00 0.00 1.40
446 448 0.747255 AGAGCGATGCACCGAGTAAT 59.253 50.000 3.51 0.00 0.00 1.89
447 449 0.179137 CAGAGCGATGCACCGAGTAA 60.179 55.000 3.51 0.00 0.00 2.24
512 533 1.880646 GCAACTCTCCGGCCTAAAACA 60.881 52.381 0.00 0.00 0.00 2.83
520 541 0.449388 CATTTGAGCAACTCTCCGGC 59.551 55.000 0.00 0.00 41.18 6.13
564 585 4.156739 AGAAAAACATGATCCGAAGAAGGC 59.843 41.667 0.00 0.00 0.00 4.35
591 612 5.888691 TGCTTCTGTACTGTGTTCAAAAA 57.111 34.783 0.00 0.00 0.00 1.94
592 613 5.676079 GCTTGCTTCTGTACTGTGTTCAAAA 60.676 40.000 0.00 0.00 0.00 2.44
593 614 4.201910 GCTTGCTTCTGTACTGTGTTCAAA 60.202 41.667 0.00 0.00 0.00 2.69
594 615 3.312421 GCTTGCTTCTGTACTGTGTTCAA 59.688 43.478 0.00 0.00 0.00 2.69
596 617 2.872245 TGCTTGCTTCTGTACTGTGTTC 59.128 45.455 0.00 0.00 0.00 3.18
597 618 2.614057 GTGCTTGCTTCTGTACTGTGTT 59.386 45.455 0.00 0.00 0.00 3.32
598 619 2.158900 AGTGCTTGCTTCTGTACTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
599 620 2.478134 GAGTGCTTGCTTCTGTACTGTG 59.522 50.000 0.00 0.00 29.71 3.66
600 621 2.103094 TGAGTGCTTGCTTCTGTACTGT 59.897 45.455 0.00 0.00 29.71 3.55
603 624 3.070018 ACATGAGTGCTTGCTTCTGTAC 58.930 45.455 0.00 0.00 0.00 2.90
604 625 3.407424 ACATGAGTGCTTGCTTCTGTA 57.593 42.857 0.00 0.00 0.00 2.74
605 626 2.267174 ACATGAGTGCTTGCTTCTGT 57.733 45.000 0.00 0.00 0.00 3.41
606 627 3.069289 TGTACATGAGTGCTTGCTTCTG 58.931 45.455 0.00 0.00 0.00 3.02
609 630 1.800586 CGTGTACATGAGTGCTTGCTT 59.199 47.619 9.62 0.00 0.00 3.91
611 632 0.179215 GCGTGTACATGAGTGCTTGC 60.179 55.000 19.38 0.00 0.00 4.01
612 633 1.136252 GTGCGTGTACATGAGTGCTTG 60.136 52.381 19.38 0.00 0.00 4.01
613 634 1.148310 GTGCGTGTACATGAGTGCTT 58.852 50.000 19.38 0.00 0.00 3.91
614 635 0.033366 TGTGCGTGTACATGAGTGCT 59.967 50.000 19.38 0.00 0.00 4.40
617 649 2.736721 GTGAATGTGCGTGTACATGAGT 59.263 45.455 19.38 0.00 40.24 3.41
623 655 2.482336 TCCATTGTGAATGTGCGTGTAC 59.518 45.455 0.00 0.00 37.18 2.90
624 656 2.772287 TCCATTGTGAATGTGCGTGTA 58.228 42.857 0.00 0.00 37.18 2.90
628 660 3.365832 GCTTATCCATTGTGAATGTGCG 58.634 45.455 0.00 0.00 37.18 5.34
630 662 4.987408 TGGCTTATCCATTGTGAATGTG 57.013 40.909 0.00 0.00 40.72 3.21
664 696 8.860088 GCTTATCCATTGTACAATATCCCTTTT 58.140 33.333 20.39 3.66 0.00 2.27
665 697 7.451566 GGCTTATCCATTGTACAATATCCCTTT 59.548 37.037 20.39 5.03 34.01 3.11
666 698 6.948309 GGCTTATCCATTGTACAATATCCCTT 59.052 38.462 20.39 5.97 34.01 3.95
667 699 6.485171 GGCTTATCCATTGTACAATATCCCT 58.515 40.000 20.39 7.06 34.01 4.20
668 700 5.652452 GGGCTTATCCATTGTACAATATCCC 59.348 44.000 20.39 14.52 36.21 3.85
669 701 6.485171 AGGGCTTATCCATTGTACAATATCC 58.515 40.000 20.39 9.71 36.21 2.59
670 702 7.119846 GTGAGGGCTTATCCATTGTACAATATC 59.880 40.741 20.39 1.09 36.21 1.63
671 703 6.942576 GTGAGGGCTTATCCATTGTACAATAT 59.057 38.462 20.39 13.78 36.21 1.28
680 712 1.922447 TGTGGTGAGGGCTTATCCATT 59.078 47.619 0.00 0.00 36.21 3.16
715 747 5.971895 ATGTTCGCCATTTTTATTGATGC 57.028 34.783 0.00 0.00 0.00 3.91
754 786 5.112686 CGAATCCCTTTCTTCTGTTCTAGG 58.887 45.833 0.00 0.00 31.73 3.02
779 815 2.787601 TAGGATACGGCGTGAACATC 57.212 50.000 24.86 17.00 46.39 3.06
822 858 0.037232 GTCCTTGTTACAGCCGCTCT 60.037 55.000 0.00 0.00 0.00 4.09
833 869 0.466189 CTGCTGGTGGTGTCCTTGTT 60.466 55.000 0.00 0.00 0.00 2.83
834 870 1.149174 CTGCTGGTGGTGTCCTTGT 59.851 57.895 0.00 0.00 0.00 3.16
835 871 2.263741 GCTGCTGGTGGTGTCCTTG 61.264 63.158 0.00 0.00 0.00 3.61
836 872 2.113986 GCTGCTGGTGGTGTCCTT 59.886 61.111 0.00 0.00 0.00 3.36
837 873 2.283143 TTTGCTGCTGGTGGTGTCCT 62.283 55.000 0.00 0.00 0.00 3.85
838 874 1.799258 CTTTGCTGCTGGTGGTGTCC 61.799 60.000 0.00 0.00 0.00 4.02
865 901 6.208204 GGATTGTGATTGAGGCTGCTAAATAT 59.792 38.462 0.00 0.00 0.00 1.28
918 954 4.594136 CACTCATGCGTACGTACTTCATA 58.406 43.478 22.55 12.52 0.00 2.15
919 955 3.435566 CACTCATGCGTACGTACTTCAT 58.564 45.455 22.55 20.26 0.00 2.57
920 956 2.858839 CACTCATGCGTACGTACTTCA 58.141 47.619 22.55 19.07 0.00 3.02
921 957 1.582502 GCACTCATGCGTACGTACTTC 59.417 52.381 22.55 14.47 43.33 3.01
923 959 3.324170 GCACTCATGCGTACGTACT 57.676 52.632 22.55 2.02 43.33 2.73
973 1009 1.896122 GACGTGGGGGTTGTAGGAGG 61.896 65.000 0.00 0.00 0.00 4.30
974 1010 1.595357 GACGTGGGGGTTGTAGGAG 59.405 63.158 0.00 0.00 0.00 3.69
975 1011 2.277591 CGACGTGGGGGTTGTAGGA 61.278 63.158 0.00 0.00 0.00 2.94
997 1033 1.285962 AGGAATCATTGGAGGTGTGGG 59.714 52.381 0.00 0.00 0.00 4.61
1016 1052 5.184479 ACAGGGATGTTGTGAATCAATCAAG 59.816 40.000 0.00 0.00 40.50 3.02
1058 1094 3.530910 CTGACCCCGACCGCTTTGT 62.531 63.158 0.00 0.00 0.00 2.83
1120 1156 3.470567 CAGCGTCGTCGGAAGTGC 61.471 66.667 3.90 3.68 37.56 4.40
1153 1192 1.754745 GTCAGGTTGGAGCTGGTGA 59.245 57.895 0.00 0.00 43.47 4.02
1154 1193 1.669115 CGTCAGGTTGGAGCTGGTG 60.669 63.158 0.00 0.00 43.47 4.17
1712 1785 2.582498 CCGATCCTCAACGGCGAC 60.582 66.667 16.62 0.00 42.55 5.19
1784 1857 3.492545 TAATCACGCGCCGTTGGC 61.493 61.111 5.73 0.00 46.75 4.52
1859 1932 2.019951 CGACAGTGAACCCCGTTCG 61.020 63.158 0.00 0.00 44.55 3.95
1860 1933 2.315386 GCGACAGTGAACCCCGTTC 61.315 63.158 0.00 0.00 42.26 3.95
1861 1934 2.280592 GCGACAGTGAACCCCGTT 60.281 61.111 0.00 0.00 0.00 4.44
1862 1935 3.515316 CTGCGACAGTGAACCCCGT 62.515 63.158 0.00 0.00 0.00 5.28
1863 1936 2.738521 CTGCGACAGTGAACCCCG 60.739 66.667 0.00 0.00 0.00 5.73
1864 1937 1.668151 GACTGCGACAGTGAACCCC 60.668 63.158 15.61 0.00 45.44 4.95
1865 1938 2.022129 CGACTGCGACAGTGAACCC 61.022 63.158 15.61 2.46 45.44 4.11
1866 1939 2.658707 GCGACTGCGACAGTGAACC 61.659 63.158 15.61 2.76 45.44 3.62
2038 2111 2.742710 TTTGGACGACGACTCGCCAG 62.743 60.000 0.00 0.00 44.33 4.85
2079 2152 1.282875 GACTTTGTTCCTGCACGGC 59.717 57.895 0.00 0.00 0.00 5.68
2080 2153 1.021202 TTGACTTTGTTCCTGCACGG 58.979 50.000 0.00 0.00 0.00 4.94
2081 2154 2.290367 TGATTGACTTTGTTCCTGCACG 59.710 45.455 0.00 0.00 0.00 5.34
2128 2201 2.202570 GCGCCATTGCTGCTTCTG 60.203 61.111 0.00 0.00 35.24 3.02
2136 2209 2.117156 ATGGTCTCAGCGCCATTGC 61.117 57.895 2.29 0.00 42.34 3.56
2304 2381 1.194218 AAGGTTTATGGGCATGCACC 58.806 50.000 19.33 15.87 0.00 5.01
2329 2406 4.936685 AAGCTAAGAAGAAACTGGGGAT 57.063 40.909 0.00 0.00 0.00 3.85
2353 2430 8.248253 GGTTAAGAAGAAACTCCAACTCAAAAA 58.752 33.333 0.00 0.00 0.00 1.94
2363 2440 9.549078 CAATATCTAGGGTTAAGAAGAAACTCC 57.451 37.037 0.00 0.00 0.00 3.85
2377 2454 4.115398 ACTACGCCTCAATATCTAGGGT 57.885 45.455 5.66 4.81 33.17 4.34
2379 2456 7.336176 TGTGTATACTACGCCTCAATATCTAGG 59.664 40.741 4.17 0.00 38.38 3.02
2397 2474 3.270877 CTGCCCCTCTTGTTGTGTATAC 58.729 50.000 0.00 0.00 0.00 1.47
2399 2476 1.004745 CCTGCCCCTCTTGTTGTGTAT 59.995 52.381 0.00 0.00 0.00 2.29
2400 2477 0.400213 CCTGCCCCTCTTGTTGTGTA 59.600 55.000 0.00 0.00 0.00 2.90
2401 2478 1.151450 CCTGCCCCTCTTGTTGTGT 59.849 57.895 0.00 0.00 0.00 3.72
2402 2479 0.607489 CTCCTGCCCCTCTTGTTGTG 60.607 60.000 0.00 0.00 0.00 3.33
2415 2492 3.437049 GGGATTATCGTTTATGCTCCTGC 59.563 47.826 0.00 0.00 40.20 4.85
2416 2493 4.452455 GTGGGATTATCGTTTATGCTCCTG 59.548 45.833 0.00 0.00 0.00 3.86
2418 2495 4.385825 TGTGGGATTATCGTTTATGCTCC 58.614 43.478 0.00 0.00 0.00 4.70
2419 2496 6.560253 AATGTGGGATTATCGTTTATGCTC 57.440 37.500 0.00 0.00 0.00 4.26
2420 2497 6.959639 AAATGTGGGATTATCGTTTATGCT 57.040 33.333 0.00 0.00 0.00 3.79
2422 2499 7.202526 AGCAAAATGTGGGATTATCGTTTATG 58.797 34.615 0.00 0.00 0.00 1.90
2423 2500 7.346751 AGCAAAATGTGGGATTATCGTTTAT 57.653 32.000 0.00 0.00 0.00 1.40
2472 3833 5.066634 TCAACTAAAATTGCTTCCAACGTGA 59.933 36.000 0.00 0.00 32.95 4.35
2537 3898 9.872721 AAAGCTCCTTTGTTAATAGTAGTACTC 57.127 33.333 5.96 0.00 31.98 2.59
2538 3899 9.654663 CAAAGCTCCTTTGTTAATAGTAGTACT 57.345 33.333 8.14 8.14 43.85 2.73
2594 3955 0.815213 TGCAACTGCGTCTGAAAGCT 60.815 50.000 7.68 0.00 45.83 3.74
2619 3980 6.325993 TCAAAAGGATGATGGGTTGAGATA 57.674 37.500 0.00 0.00 0.00 1.98
2629 3990 9.275398 TCCAAAGAAAATTTCAAAAGGATGATG 57.725 29.630 8.55 0.00 0.00 3.07
2630 3991 9.850198 TTCCAAAGAAAATTTCAAAAGGATGAT 57.150 25.926 8.55 0.00 0.00 2.45
2631 3992 9.678260 TTTCCAAAGAAAATTTCAAAAGGATGA 57.322 25.926 8.55 0.54 39.05 2.92
2694 4055 7.853524 TCGAACAACGCTTTTCTTCTTAAATA 58.146 30.769 0.00 0.00 42.26 1.40
2696 4057 6.109320 TCGAACAACGCTTTTCTTCTTAAA 57.891 33.333 0.00 0.00 42.26 1.52
2711 4072 6.004408 TGGGCTAAAGTTTATTCGAACAAC 57.996 37.500 0.00 6.98 31.94 3.32
2745 4106 2.036733 TCAAAAGACGAATCGGGTGACT 59.963 45.455 7.80 0.00 0.00 3.41
2750 4111 1.661112 GCTCTCAAAAGACGAATCGGG 59.339 52.381 7.80 0.00 0.00 5.14
2754 4115 1.461127 GTGCGCTCTCAAAAGACGAAT 59.539 47.619 9.73 0.00 31.75 3.34
2803 4165 1.730593 CTACTTGCTACGCGTCGTGC 61.731 60.000 18.63 19.55 41.39 5.34
2850 4221 5.451354 ACAGTAGGGACCTTTTTAAAGCAA 58.549 37.500 0.00 0.00 34.69 3.91
2922 4295 1.995484 CTCACATGTAACGTGCTCTGG 59.005 52.381 0.00 0.00 34.27 3.86
2923 4296 2.677199 ACTCACATGTAACGTGCTCTG 58.323 47.619 0.00 0.00 34.27 3.35
2925 4298 3.000322 GCATACTCACATGTAACGTGCTC 60.000 47.826 0.00 0.00 34.27 4.26
2934 4307 0.389817 ACGCACGCATACTCACATGT 60.390 50.000 0.00 0.00 0.00 3.21
2968 4341 2.187946 GGATGTGCTCCGGACTGG 59.812 66.667 0.00 0.00 33.29 4.00
3069 4454 2.119495 AGTATCCTGGCACCTAACTGG 58.881 52.381 0.00 0.00 42.93 4.00
3072 4457 7.937394 ACATTTATAAGTATCCTGGCACCTAAC 59.063 37.037 0.00 0.00 0.00 2.34
3094 4479 9.912634 CATCTGGTAGATAAAACAAACAACATT 57.087 29.630 0.00 0.00 32.12 2.71
3110 4495 9.231297 CCAAACTTTAATCTTTCATCTGGTAGA 57.769 33.333 0.00 0.00 0.00 2.59
3111 4496 7.970614 GCCAAACTTTAATCTTTCATCTGGTAG 59.029 37.037 0.00 0.00 0.00 3.18
3112 4497 7.669722 AGCCAAACTTTAATCTTTCATCTGGTA 59.330 33.333 0.00 0.00 0.00 3.25
3113 4498 6.494835 AGCCAAACTTTAATCTTTCATCTGGT 59.505 34.615 0.00 0.00 0.00 4.00
3114 4499 6.928520 AGCCAAACTTTAATCTTTCATCTGG 58.071 36.000 0.00 0.00 0.00 3.86
3115 4500 7.272084 CGAAGCCAAACTTTAATCTTTCATCTG 59.728 37.037 0.00 0.00 39.29 2.90
3116 4501 7.174946 TCGAAGCCAAACTTTAATCTTTCATCT 59.825 33.333 0.00 0.00 39.29 2.90
3117 4502 7.305474 TCGAAGCCAAACTTTAATCTTTCATC 58.695 34.615 0.00 0.00 39.29 2.92
3118 4503 7.214467 TCGAAGCCAAACTTTAATCTTTCAT 57.786 32.000 0.00 0.00 39.29 2.57
3119 4504 6.627395 TCGAAGCCAAACTTTAATCTTTCA 57.373 33.333 0.00 0.00 39.29 2.69
3120 4505 6.362551 GGTTCGAAGCCAAACTTTAATCTTTC 59.637 38.462 16.42 0.00 39.29 2.62
3121 4506 6.183360 TGGTTCGAAGCCAAACTTTAATCTTT 60.183 34.615 23.50 0.00 39.29 2.52
3122 4507 5.300792 TGGTTCGAAGCCAAACTTTAATCTT 59.699 36.000 23.50 0.00 39.29 2.40
3123 4508 4.825085 TGGTTCGAAGCCAAACTTTAATCT 59.175 37.500 23.50 0.00 39.29 2.40
3124 4509 5.116069 TGGTTCGAAGCCAAACTTTAATC 57.884 39.130 23.50 0.00 39.29 1.75
3125 4510 5.300792 TCTTGGTTCGAAGCCAAACTTTAAT 59.699 36.000 23.50 0.00 44.37 1.40
3126 4511 4.641094 TCTTGGTTCGAAGCCAAACTTTAA 59.359 37.500 23.50 8.35 44.37 1.52
3127 4512 4.200874 TCTTGGTTCGAAGCCAAACTTTA 58.799 39.130 23.50 0.21 44.37 1.85
3128 4513 3.020984 TCTTGGTTCGAAGCCAAACTTT 58.979 40.909 23.50 0.00 44.37 2.66
3129 4514 2.650322 TCTTGGTTCGAAGCCAAACTT 58.350 42.857 23.50 0.00 44.37 2.66
3130 4515 2.341846 TCTTGGTTCGAAGCCAAACT 57.658 45.000 23.50 0.00 44.37 2.66
3131 4516 2.814336 AGATCTTGGTTCGAAGCCAAAC 59.186 45.455 23.50 17.89 44.37 2.93
3132 4517 3.140325 AGATCTTGGTTCGAAGCCAAA 57.860 42.857 23.50 11.76 44.37 3.28
3133 4518 2.859165 AGATCTTGGTTCGAAGCCAA 57.141 45.000 23.50 22.87 43.04 4.52
3134 4519 2.859165 AAGATCTTGGTTCGAAGCCA 57.141 45.000 23.50 17.95 0.00 4.75
3135 4520 4.636206 ACATAAAGATCTTGGTTCGAAGCC 59.364 41.667 23.50 15.71 0.00 4.35
3136 4521 5.447818 CCACATAAAGATCTTGGTTCGAAGC 60.448 44.000 20.13 20.13 0.00 3.86
3137 4522 5.643777 ACCACATAAAGATCTTGGTTCGAAG 59.356 40.000 9.17 0.00 37.26 3.79
3138 4523 5.556915 ACCACATAAAGATCTTGGTTCGAA 58.443 37.500 9.17 0.00 37.26 3.71
3139 4524 5.160607 ACCACATAAAGATCTTGGTTCGA 57.839 39.130 9.17 0.00 37.26 3.71
3140 4525 6.106673 AGTACCACATAAAGATCTTGGTTCG 58.893 40.000 18.75 8.61 41.00 3.95
3141 4526 6.539103 GGAGTACCACATAAAGATCTTGGTTC 59.461 42.308 18.75 14.43 41.00 3.62
3142 4527 6.415573 GGAGTACCACATAAAGATCTTGGTT 58.584 40.000 18.75 4.70 41.00 3.67
3143 4528 5.104485 GGGAGTACCACATAAAGATCTTGGT 60.104 44.000 17.87 17.87 43.17 3.67
3144 4529 5.131142 AGGGAGTACCACATAAAGATCTTGG 59.869 44.000 9.17 8.82 43.89 3.61
3145 4530 6.240549 AGGGAGTACCACATAAAGATCTTG 57.759 41.667 9.17 0.00 43.89 3.02
3146 4531 5.367060 GGAGGGAGTACCACATAAAGATCTT 59.633 44.000 0.88 0.88 43.89 2.40
3147 4532 4.902448 GGAGGGAGTACCACATAAAGATCT 59.098 45.833 0.00 0.00 43.89 2.75
3148 4533 4.902448 AGGAGGGAGTACCACATAAAGATC 59.098 45.833 0.00 0.00 43.89 2.75
3149 4534 4.897051 AGGAGGGAGTACCACATAAAGAT 58.103 43.478 0.00 0.00 43.89 2.40
3150 4535 4.348020 AGGAGGGAGTACCACATAAAGA 57.652 45.455 0.00 0.00 43.89 2.52
3151 4536 5.437191 AAAGGAGGGAGTACCACATAAAG 57.563 43.478 0.00 0.00 43.89 1.85
3152 4537 5.853572 AAAAGGAGGGAGTACCACATAAA 57.146 39.130 0.00 0.00 43.89 1.40
3153 4538 5.853572 AAAAAGGAGGGAGTACCACATAA 57.146 39.130 0.00 0.00 43.89 1.90
3154 4539 7.519347 AATAAAAAGGAGGGAGTACCACATA 57.481 36.000 0.00 0.00 43.89 2.29
3155 4540 6.402981 AATAAAAAGGAGGGAGTACCACAT 57.597 37.500 0.00 0.00 43.89 3.21
3156 4541 5.853572 AATAAAAAGGAGGGAGTACCACA 57.146 39.130 0.00 0.00 43.89 4.17
3157 4542 7.400439 AGTAAATAAAAAGGAGGGAGTACCAC 58.600 38.462 0.00 0.00 43.89 4.16
3158 4543 7.311486 GGAGTAAATAAAAAGGAGGGAGTACCA 60.311 40.741 0.00 0.00 43.89 3.25
3159 4544 7.052873 GGAGTAAATAAAAAGGAGGGAGTACC 58.947 42.308 0.00 0.00 40.67 3.34
3160 4545 6.760298 CGGAGTAAATAAAAAGGAGGGAGTAC 59.240 42.308 0.00 0.00 0.00 2.73
3161 4546 6.631088 GCGGAGTAAATAAAAAGGAGGGAGTA 60.631 42.308 0.00 0.00 0.00 2.59
3162 4547 5.742063 CGGAGTAAATAAAAAGGAGGGAGT 58.258 41.667 0.00 0.00 0.00 3.85
3163 4548 4.575236 GCGGAGTAAATAAAAAGGAGGGAG 59.425 45.833 0.00 0.00 0.00 4.30
3164 4549 4.019141 TGCGGAGTAAATAAAAAGGAGGGA 60.019 41.667 0.00 0.00 0.00 4.20
3165 4550 4.266714 TGCGGAGTAAATAAAAAGGAGGG 58.733 43.478 0.00 0.00 0.00 4.30
3166 4551 7.745620 ATATGCGGAGTAAATAAAAAGGAGG 57.254 36.000 0.00 0.00 0.00 4.30
3174 4559 9.472361 GTCAACTCTAATATGCGGAGTAAATAA 57.528 33.333 6.10 0.00 39.09 1.40
3175 4560 8.857098 AGTCAACTCTAATATGCGGAGTAAATA 58.143 33.333 6.10 0.00 39.09 1.40
3176 4561 7.653713 CAGTCAACTCTAATATGCGGAGTAAAT 59.346 37.037 6.10 0.00 39.09 1.40
3177 4562 6.978659 CAGTCAACTCTAATATGCGGAGTAAA 59.021 38.462 6.10 0.00 39.09 2.01
3178 4563 6.320418 TCAGTCAACTCTAATATGCGGAGTAA 59.680 38.462 6.10 0.00 39.09 2.24
3179 4564 5.826208 TCAGTCAACTCTAATATGCGGAGTA 59.174 40.000 6.10 0.00 39.09 2.59
3180 4565 4.645136 TCAGTCAACTCTAATATGCGGAGT 59.355 41.667 0.00 0.00 41.37 3.85
3181 4566 5.188327 TCAGTCAACTCTAATATGCGGAG 57.812 43.478 0.00 0.00 0.00 4.63
3182 4567 5.127194 ACTTCAGTCAACTCTAATATGCGGA 59.873 40.000 0.00 0.00 0.00 5.54
3183 4568 5.352284 ACTTCAGTCAACTCTAATATGCGG 58.648 41.667 0.00 0.00 0.00 5.69
3184 4569 6.503616 GACTTCAGTCAACTCTAATATGCG 57.496 41.667 1.86 0.00 44.18 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.