Multiple sequence alignment - TraesCS7A01G346700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G346700 chr7A 100.000 2468 0 0 1 2468 509527786 509525319 0.000000e+00 4558.0
1 TraesCS7A01G346700 chr7A 81.950 482 69 13 1014 1485 509467813 509467340 2.300000e-105 392.0
2 TraesCS7A01G346700 chr7A 93.050 259 18 0 1180 1438 509469080 509468822 1.790000e-101 379.0
3 TraesCS7A01G346700 chr7A 89.236 288 29 2 1186 1472 509651075 509650789 2.330000e-95 359.0
4 TraesCS7A01G346700 chr3B 96.939 784 24 0 1685 2468 53805210 53805993 0.000000e+00 1315.0
5 TraesCS7A01G346700 chr3B 96.915 778 24 0 1691 2468 585738030 585737253 0.000000e+00 1304.0
6 TraesCS7A01G346700 chr3B 93.830 778 47 1 1692 2468 542166997 542167774 0.000000e+00 1170.0
7 TraesCS7A01G346700 chr7D 92.617 921 41 14 656 1554 423641653 423642568 0.000000e+00 1299.0
8 TraesCS7A01G346700 chr7D 83.512 467 61 12 1014 1474 423711040 423711496 2.930000e-114 422.0
9 TraesCS7A01G346700 chr7D 91.241 274 24 0 1165 1438 423709523 423709796 8.330000e-100 374.0
10 TraesCS7A01G346700 chr7B 92.060 932 42 11 551 1475 440376589 440377495 0.000000e+00 1282.0
11 TraesCS7A01G346700 chr7B 95.742 775 31 1 1694 2468 424532805 424532033 0.000000e+00 1247.0
12 TraesCS7A01G346700 chr7B 95.238 777 34 2 1693 2468 587676687 587675913 0.000000e+00 1227.0
13 TraesCS7A01G346700 chr7B 92.701 274 20 0 1165 1438 440814115 440814388 1.780000e-106 396.0
14 TraesCS7A01G346700 chr7B 89.310 290 31 0 1183 1472 440332360 440332649 5.020000e-97 364.0
15 TraesCS7A01G346700 chr7B 82.727 110 15 4 1500 1608 440377582 440377688 7.270000e-16 95.3
16 TraesCS7A01G346700 chr4B 91.108 776 66 3 1694 2468 419813355 419814128 0.000000e+00 1048.0
17 TraesCS7A01G346700 chr2D 88.774 775 87 0 1694 2468 165547771 165548545 0.000000e+00 950.0
18 TraesCS7A01G346700 chr5D 87.613 775 96 0 1694 2468 509946896 509947670 0.000000e+00 900.0
19 TraesCS7A01G346700 chr5B 86.968 775 96 5 1696 2468 340344612 340343841 0.000000e+00 867.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G346700 chr7A 509525319 509527786 2467 True 4558.00 4558 100.0000 1 2468 1 chr7A.!!$R1 2467
1 TraesCS7A01G346700 chr7A 509467340 509469080 1740 True 385.50 392 87.5000 1014 1485 2 chr7A.!!$R3 471
2 TraesCS7A01G346700 chr3B 53805210 53805993 783 False 1315.00 1315 96.9390 1685 2468 1 chr3B.!!$F1 783
3 TraesCS7A01G346700 chr3B 585737253 585738030 777 True 1304.00 1304 96.9150 1691 2468 1 chr3B.!!$R1 777
4 TraesCS7A01G346700 chr3B 542166997 542167774 777 False 1170.00 1170 93.8300 1692 2468 1 chr3B.!!$F2 776
5 TraesCS7A01G346700 chr7D 423641653 423642568 915 False 1299.00 1299 92.6170 656 1554 1 chr7D.!!$F1 898
6 TraesCS7A01G346700 chr7D 423709523 423711496 1973 False 398.00 422 87.3765 1014 1474 2 chr7D.!!$F2 460
7 TraesCS7A01G346700 chr7B 424532033 424532805 772 True 1247.00 1247 95.7420 1694 2468 1 chr7B.!!$R1 774
8 TraesCS7A01G346700 chr7B 587675913 587676687 774 True 1227.00 1227 95.2380 1693 2468 1 chr7B.!!$R2 775
9 TraesCS7A01G346700 chr7B 440376589 440377688 1099 False 688.65 1282 87.3935 551 1608 2 chr7B.!!$F3 1057
10 TraesCS7A01G346700 chr4B 419813355 419814128 773 False 1048.00 1048 91.1080 1694 2468 1 chr4B.!!$F1 774
11 TraesCS7A01G346700 chr2D 165547771 165548545 774 False 950.00 950 88.7740 1694 2468 1 chr2D.!!$F1 774
12 TraesCS7A01G346700 chr5D 509946896 509947670 774 False 900.00 900 87.6130 1694 2468 1 chr5D.!!$F1 774
13 TraesCS7A01G346700 chr5B 340343841 340344612 771 True 867.00 867 86.9680 1696 2468 1 chr5B.!!$R1 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
342 343 0.095935 GCGTCACATCATGCACACTC 59.904 55.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1618 2263 0.033699 ATTCCTGCCTTCTTCTGCCC 60.034 55.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.432712 AGTTGGTTTTGTTGATGAGTTGC 58.567 39.130 0.00 0.00 0.00 4.17
24 25 3.077229 TGGTTTTGTTGATGAGTTGCG 57.923 42.857 0.00 0.00 0.00 4.85
25 26 2.685388 TGGTTTTGTTGATGAGTTGCGA 59.315 40.909 0.00 0.00 0.00 5.10
26 27 3.243035 TGGTTTTGTTGATGAGTTGCGAG 60.243 43.478 0.00 0.00 0.00 5.03
27 28 3.243068 GGTTTTGTTGATGAGTTGCGAGT 60.243 43.478 0.00 0.00 0.00 4.18
28 29 4.024387 GGTTTTGTTGATGAGTTGCGAGTA 60.024 41.667 0.00 0.00 0.00 2.59
29 30 5.504994 GGTTTTGTTGATGAGTTGCGAGTAA 60.505 40.000 0.00 0.00 0.00 2.24
30 31 5.940192 TTTGTTGATGAGTTGCGAGTAAT 57.060 34.783 0.00 0.00 0.00 1.89
31 32 5.530519 TTGTTGATGAGTTGCGAGTAATC 57.469 39.130 0.00 0.00 0.00 1.75
32 33 4.565022 TGTTGATGAGTTGCGAGTAATCA 58.435 39.130 4.81 4.81 0.00 2.57
33 34 5.178061 TGTTGATGAGTTGCGAGTAATCAT 58.822 37.500 9.37 0.84 28.22 2.45
34 35 5.063817 TGTTGATGAGTTGCGAGTAATCATG 59.936 40.000 9.37 0.00 28.22 3.07
35 36 4.758688 TGATGAGTTGCGAGTAATCATGT 58.241 39.130 4.81 0.00 30.98 3.21
36 37 5.178061 TGATGAGTTGCGAGTAATCATGTT 58.822 37.500 4.81 0.00 30.98 2.71
38 39 4.565022 TGAGTTGCGAGTAATCATGTTGA 58.435 39.130 0.00 0.00 0.00 3.18
39 40 4.994217 TGAGTTGCGAGTAATCATGTTGAA 59.006 37.500 0.00 0.00 0.00 2.69
40 41 5.643348 TGAGTTGCGAGTAATCATGTTGAAT 59.357 36.000 0.00 0.00 0.00 2.57
41 42 5.872635 AGTTGCGAGTAATCATGTTGAATG 58.127 37.500 0.00 0.00 0.00 2.67
42 43 5.412594 AGTTGCGAGTAATCATGTTGAATGT 59.587 36.000 0.00 0.00 0.00 2.71
43 44 5.878332 TGCGAGTAATCATGTTGAATGTT 57.122 34.783 0.00 0.00 0.00 2.71
44 45 6.252967 TGCGAGTAATCATGTTGAATGTTT 57.747 33.333 0.00 0.00 0.00 2.83
45 46 6.085573 TGCGAGTAATCATGTTGAATGTTTG 58.914 36.000 0.00 0.00 0.00 2.93
47 48 6.317088 CGAGTAATCATGTTGAATGTTTGCT 58.683 36.000 0.00 1.09 0.00 3.91
48 49 6.803320 CGAGTAATCATGTTGAATGTTTGCTT 59.197 34.615 0.00 0.00 0.00 3.91
49 50 7.326789 CGAGTAATCATGTTGAATGTTTGCTTT 59.673 33.333 0.00 0.00 0.00 3.51
50 51 8.301730 AGTAATCATGTTGAATGTTTGCTTTG 57.698 30.769 0.00 0.00 0.00 2.77
51 52 7.927629 AGTAATCATGTTGAATGTTTGCTTTGT 59.072 29.630 0.00 0.00 0.00 2.83
52 53 7.556733 AATCATGTTGAATGTTTGCTTTGTT 57.443 28.000 0.00 0.00 0.00 2.83
53 54 6.981762 TCATGTTGAATGTTTGCTTTGTTT 57.018 29.167 0.00 0.00 0.00 2.83
55 56 5.793026 TGTTGAATGTTTGCTTTGTTTCC 57.207 34.783 0.00 0.00 0.00 3.13
56 57 5.240891 TGTTGAATGTTTGCTTTGTTTCCA 58.759 33.333 0.00 0.00 0.00 3.53
57 58 5.879223 TGTTGAATGTTTGCTTTGTTTCCAT 59.121 32.000 0.00 0.00 0.00 3.41
58 59 6.373774 TGTTGAATGTTTGCTTTGTTTCCATT 59.626 30.769 0.00 0.00 0.00 3.16
59 60 6.360844 TGAATGTTTGCTTTGTTTCCATTG 57.639 33.333 0.00 0.00 0.00 2.82
60 61 6.111382 TGAATGTTTGCTTTGTTTCCATTGA 58.889 32.000 0.00 0.00 0.00 2.57
61 62 6.258287 TGAATGTTTGCTTTGTTTCCATTGAG 59.742 34.615 0.00 0.00 0.00 3.02
62 63 5.336150 TGTTTGCTTTGTTTCCATTGAGA 57.664 34.783 0.00 0.00 0.00 3.27
64 65 5.105392 TGTTTGCTTTGTTTCCATTGAGAGT 60.105 36.000 0.00 0.00 0.00 3.24
65 66 5.596836 TTGCTTTGTTTCCATTGAGAGTT 57.403 34.783 0.00 0.00 0.00 3.01
68 69 4.741676 GCTTTGTTTCCATTGAGAGTTGTG 59.258 41.667 0.00 0.00 0.00 3.33
69 70 5.450412 GCTTTGTTTCCATTGAGAGTTGTGA 60.450 40.000 0.00 0.00 0.00 3.58
70 71 6.713762 TTTGTTTCCATTGAGAGTTGTGAT 57.286 33.333 0.00 0.00 0.00 3.06
71 72 6.713762 TTGTTTCCATTGAGAGTTGTGATT 57.286 33.333 0.00 0.00 0.00 2.57
72 73 7.815840 TTGTTTCCATTGAGAGTTGTGATTA 57.184 32.000 0.00 0.00 0.00 1.75
73 74 7.439157 TGTTTCCATTGAGAGTTGTGATTAG 57.561 36.000 0.00 0.00 0.00 1.73
75 76 7.388776 TGTTTCCATTGAGAGTTGTGATTAGAG 59.611 37.037 0.00 0.00 0.00 2.43
76 77 5.423015 TCCATTGAGAGTTGTGATTAGAGC 58.577 41.667 0.00 0.00 0.00 4.09
77 78 5.188555 TCCATTGAGAGTTGTGATTAGAGCT 59.811 40.000 0.00 0.00 0.00 4.09
78 79 5.293814 CCATTGAGAGTTGTGATTAGAGCTG 59.706 44.000 0.00 0.00 0.00 4.24
79 80 5.728637 TTGAGAGTTGTGATTAGAGCTGA 57.271 39.130 0.00 0.00 0.00 4.26
80 81 5.728637 TGAGAGTTGTGATTAGAGCTGAA 57.271 39.130 0.00 0.00 0.00 3.02
81 82 6.101650 TGAGAGTTGTGATTAGAGCTGAAA 57.898 37.500 0.00 0.00 0.00 2.69
83 84 7.840931 TGAGAGTTGTGATTAGAGCTGAAATA 58.159 34.615 0.00 0.00 0.00 1.40
85 86 7.846066 AGAGTTGTGATTAGAGCTGAAATAGT 58.154 34.615 0.00 0.00 0.00 2.12
86 87 8.972127 AGAGTTGTGATTAGAGCTGAAATAGTA 58.028 33.333 0.00 0.00 0.00 1.82
88 89 8.200792 AGTTGTGATTAGAGCTGAAATAGTAGG 58.799 37.037 0.00 0.00 0.00 3.18
89 90 7.055667 TGTGATTAGAGCTGAAATAGTAGGG 57.944 40.000 0.00 0.00 0.00 3.53
90 91 6.839134 TGTGATTAGAGCTGAAATAGTAGGGA 59.161 38.462 0.00 0.00 0.00 4.20
91 92 7.510685 TGTGATTAGAGCTGAAATAGTAGGGAT 59.489 37.037 0.00 0.00 0.00 3.85
92 93 7.816995 GTGATTAGAGCTGAAATAGTAGGGATG 59.183 40.741 0.00 0.00 0.00 3.51
93 94 6.672266 TTAGAGCTGAAATAGTAGGGATGG 57.328 41.667 0.00 0.00 0.00 3.51
94 95 3.906846 AGAGCTGAAATAGTAGGGATGGG 59.093 47.826 0.00 0.00 0.00 4.00
95 96 2.982488 AGCTGAAATAGTAGGGATGGGG 59.018 50.000 0.00 0.00 0.00 4.96
101 102 0.469331 TAGTAGGGATGGGGCGTGAG 60.469 60.000 0.00 0.00 0.00 3.51
126 127 1.039856 GCAACAAGAAAAGGGAGGCA 58.960 50.000 0.00 0.00 0.00 4.75
127 128 1.412343 GCAACAAGAAAAGGGAGGCAA 59.588 47.619 0.00 0.00 0.00 4.52
128 129 2.037641 GCAACAAGAAAAGGGAGGCAAT 59.962 45.455 0.00 0.00 0.00 3.56
131 132 3.849527 ACAAGAAAAGGGAGGCAATCTT 58.150 40.909 0.00 0.00 0.00 2.40
149 150 2.828520 TCTTGCTAGTGAACCAGAGGAG 59.171 50.000 0.00 0.00 0.00 3.69
151 152 0.827368 GCTAGTGAACCAGAGGAGGG 59.173 60.000 0.00 0.00 0.00 4.30
152 153 1.490574 CTAGTGAACCAGAGGAGGGG 58.509 60.000 0.00 0.00 0.00 4.79
154 155 1.229529 GTGAACCAGAGGAGGGGGA 60.230 63.158 0.00 0.00 0.00 4.81
155 156 1.229529 TGAACCAGAGGAGGGGGAC 60.230 63.158 0.00 0.00 0.00 4.46
156 157 1.229529 GAACCAGAGGAGGGGGACA 60.230 63.158 0.00 0.00 0.00 4.02
157 158 0.621862 GAACCAGAGGAGGGGGACAT 60.622 60.000 0.00 0.00 0.00 3.06
158 159 0.621862 AACCAGAGGAGGGGGACATC 60.622 60.000 0.00 0.00 41.37 3.06
169 170 4.972875 GGACATCCCTGGAAGCTG 57.027 61.111 0.00 0.00 0.00 4.24
171 172 1.274703 GGACATCCCTGGAAGCTGGA 61.275 60.000 0.00 0.00 0.00 3.86
172 173 0.620556 GACATCCCTGGAAGCTGGAA 59.379 55.000 0.00 0.00 27.87 3.53
173 174 0.329596 ACATCCCTGGAAGCTGGAAC 59.670 55.000 0.00 0.00 27.87 3.62
174 175 0.394899 CATCCCTGGAAGCTGGAACC 60.395 60.000 0.00 0.00 27.87 3.62
176 177 2.045926 CCTGGAAGCTGGAACCCG 60.046 66.667 0.00 0.00 0.00 5.28
178 179 2.852075 TGGAAGCTGGAACCCGGT 60.852 61.111 0.00 0.00 31.34 5.28
180 181 2.747686 GAAGCTGGAACCCGGTCA 59.252 61.111 0.00 0.00 31.34 4.02
182 183 2.113243 GAAGCTGGAACCCGGTCAGT 62.113 60.000 0.00 0.00 31.34 3.41
183 184 0.834687 AAGCTGGAACCCGGTCAGTA 60.835 55.000 0.00 0.00 31.34 2.74
185 186 0.252197 GCTGGAACCCGGTCAGTATT 59.748 55.000 0.00 0.00 31.34 1.89
186 187 2.012051 GCTGGAACCCGGTCAGTATTG 61.012 57.143 0.00 0.00 31.34 1.90
187 188 1.278127 CTGGAACCCGGTCAGTATTGT 59.722 52.381 0.00 0.00 0.00 2.71
189 190 2.289819 TGGAACCCGGTCAGTATTGTTC 60.290 50.000 0.00 3.98 33.20 3.18
190 191 2.027469 GGAACCCGGTCAGTATTGTTCT 60.027 50.000 13.33 0.00 34.15 3.01
191 192 3.558533 GGAACCCGGTCAGTATTGTTCTT 60.559 47.826 13.33 0.00 34.15 2.52
193 194 2.635915 ACCCGGTCAGTATTGTTCTTCA 59.364 45.455 0.00 0.00 0.00 3.02
196 197 3.623060 CCGGTCAGTATTGTTCTTCATGG 59.377 47.826 0.00 0.00 0.00 3.66
198 199 4.568359 CGGTCAGTATTGTTCTTCATGGAG 59.432 45.833 0.00 0.00 0.00 3.86
199 200 5.624509 CGGTCAGTATTGTTCTTCATGGAGA 60.625 44.000 0.00 0.00 0.00 3.71
200 201 5.582665 GGTCAGTATTGTTCTTCATGGAGAC 59.417 44.000 2.13 0.00 0.00 3.36
219 220 4.446371 AGACAACTTGTGGCTCATATAGC 58.554 43.478 0.00 0.00 45.33 2.97
230 231 4.057406 GCTCATATAGCCTCATGCCTAG 57.943 50.000 0.00 0.00 46.25 3.02
232 233 4.285020 CTCATATAGCCTCATGCCTAGGA 58.715 47.826 14.75 0.00 42.71 2.94
233 234 4.888573 TCATATAGCCTCATGCCTAGGAT 58.111 43.478 14.75 0.00 42.71 3.24
234 235 6.030727 TCATATAGCCTCATGCCTAGGATA 57.969 41.667 14.75 0.00 42.71 2.59
235 236 6.443832 TCATATAGCCTCATGCCTAGGATAA 58.556 40.000 14.75 0.00 38.43 1.75
236 237 6.902974 TCATATAGCCTCATGCCTAGGATAAA 59.097 38.462 14.75 0.00 38.43 1.40
239 240 3.976654 AGCCTCATGCCTAGGATAAAGAA 59.023 43.478 14.75 0.00 42.71 2.52
240 241 4.600983 AGCCTCATGCCTAGGATAAAGAAT 59.399 41.667 14.75 0.00 42.71 2.40
241 242 4.699257 GCCTCATGCCTAGGATAAAGAATG 59.301 45.833 14.75 4.16 36.08 2.67
242 243 4.699257 CCTCATGCCTAGGATAAAGAATGC 59.301 45.833 14.75 0.00 36.08 3.56
244 245 4.104579 TCATGCCTAGGATAAAGAATGCCA 59.895 41.667 14.75 0.00 0.00 4.92
245 246 4.518278 TGCCTAGGATAAAGAATGCCAA 57.482 40.909 14.75 0.00 0.00 4.52
246 247 4.865905 TGCCTAGGATAAAGAATGCCAAA 58.134 39.130 14.75 0.00 0.00 3.28
247 248 5.268387 TGCCTAGGATAAAGAATGCCAAAA 58.732 37.500 14.75 0.00 0.00 2.44
248 249 5.127031 TGCCTAGGATAAAGAATGCCAAAAC 59.873 40.000 14.75 0.00 0.00 2.43
249 250 5.733373 GCCTAGGATAAAGAATGCCAAAACG 60.733 44.000 14.75 0.00 0.00 3.60
250 251 4.110036 AGGATAAAGAATGCCAAAACGC 57.890 40.909 0.00 0.00 0.00 4.84
251 252 3.509575 AGGATAAAGAATGCCAAAACGCA 59.490 39.130 0.00 0.00 44.35 5.24
252 253 4.021544 AGGATAAAGAATGCCAAAACGCAA 60.022 37.500 0.00 0.00 43.24 4.85
253 254 4.327087 GGATAAAGAATGCCAAAACGCAAG 59.673 41.667 0.00 0.00 43.24 4.01
254 255 1.501169 AAGAATGCCAAAACGCAAGC 58.499 45.000 0.00 0.00 43.24 4.01
255 256 0.664166 AGAATGCCAAAACGCAAGCG 60.664 50.000 13.50 13.50 43.24 4.68
256 257 2.214237 GAATGCCAAAACGCAAGCGC 62.214 55.000 15.09 0.00 43.24 5.92
259 260 3.977244 CCAAAACGCAAGCGCCCT 61.977 61.111 15.09 0.00 44.19 5.19
260 261 2.730604 CAAAACGCAAGCGCCCTG 60.731 61.111 15.09 2.58 44.19 4.45
271 272 2.030262 CGCCCTGCCAGAGATAGC 59.970 66.667 0.00 0.00 0.00 2.97
272 273 2.030262 GCCCTGCCAGAGATAGCG 59.970 66.667 0.00 0.00 0.00 4.26
273 274 2.502492 GCCCTGCCAGAGATAGCGA 61.502 63.158 0.00 0.00 0.00 4.93
274 275 1.365633 CCCTGCCAGAGATAGCGAC 59.634 63.158 0.00 0.00 0.00 5.19
275 276 1.112315 CCCTGCCAGAGATAGCGACT 61.112 60.000 0.00 0.00 0.00 4.18
277 278 1.269517 CCTGCCAGAGATAGCGACTTC 60.270 57.143 0.00 0.00 0.00 3.01
278 279 1.406898 CTGCCAGAGATAGCGACTTCA 59.593 52.381 0.00 0.00 0.00 3.02
279 280 2.034878 TGCCAGAGATAGCGACTTCAT 58.965 47.619 0.00 0.00 0.00 2.57
280 281 2.223900 TGCCAGAGATAGCGACTTCATG 60.224 50.000 0.00 0.00 0.00 3.07
281 282 2.223923 GCCAGAGATAGCGACTTCATGT 60.224 50.000 0.00 0.00 0.00 3.21
282 283 3.004839 GCCAGAGATAGCGACTTCATGTA 59.995 47.826 0.00 0.00 0.00 2.29
284 285 4.215201 CAGAGATAGCGACTTCATGTACG 58.785 47.826 0.00 0.00 0.00 3.67
287 288 3.251245 AGATAGCGACTTCATGTACGAGG 59.749 47.826 0.00 0.00 0.00 4.63
289 290 1.544691 AGCGACTTCATGTACGAGGTT 59.455 47.619 0.00 0.00 0.00 3.50
292 293 3.571571 CGACTTCATGTACGAGGTTCAA 58.428 45.455 0.00 0.00 0.00 2.69
293 294 3.364023 CGACTTCATGTACGAGGTTCAAC 59.636 47.826 0.00 0.00 0.00 3.18
294 295 3.314553 ACTTCATGTACGAGGTTCAACG 58.685 45.455 0.00 0.00 0.00 4.10
295 296 1.705256 TCATGTACGAGGTTCAACGC 58.295 50.000 0.00 0.00 0.00 4.84
296 297 0.365523 CATGTACGAGGTTCAACGCG 59.634 55.000 3.53 3.53 0.00 6.01
298 299 0.661187 TGTACGAGGTTCAACGCGTC 60.661 55.000 14.44 0.00 38.09 5.19
299 300 1.081242 TACGAGGTTCAACGCGTCC 60.081 57.895 14.44 9.85 38.09 4.79
300 301 1.518056 TACGAGGTTCAACGCGTCCT 61.518 55.000 14.44 15.56 38.09 3.85
301 302 1.663702 CGAGGTTCAACGCGTCCTT 60.664 57.895 14.44 0.00 0.00 3.36
302 303 1.219522 CGAGGTTCAACGCGTCCTTT 61.220 55.000 14.44 0.00 0.00 3.11
303 304 0.942252 GAGGTTCAACGCGTCCTTTT 59.058 50.000 14.44 0.00 0.00 2.27
305 306 2.545106 GAGGTTCAACGCGTCCTTTTTA 59.455 45.455 14.44 0.00 0.00 1.52
306 307 2.288729 AGGTTCAACGCGTCCTTTTTAC 59.711 45.455 14.44 4.16 0.00 2.01
307 308 2.602933 GGTTCAACGCGTCCTTTTTACC 60.603 50.000 14.44 9.87 0.00 2.85
308 309 1.228533 TCAACGCGTCCTTTTTACCC 58.771 50.000 14.44 0.00 0.00 3.69
309 310 1.202675 TCAACGCGTCCTTTTTACCCT 60.203 47.619 14.44 0.00 0.00 4.34
310 311 2.036992 TCAACGCGTCCTTTTTACCCTA 59.963 45.455 14.44 0.00 0.00 3.53
312 313 4.081752 TCAACGCGTCCTTTTTACCCTATA 60.082 41.667 14.44 0.00 0.00 1.31
313 314 4.470334 ACGCGTCCTTTTTACCCTATAA 57.530 40.909 5.58 0.00 0.00 0.98
316 317 5.882000 ACGCGTCCTTTTTACCCTATAATTT 59.118 36.000 5.58 0.00 0.00 1.82
317 318 6.037500 ACGCGTCCTTTTTACCCTATAATTTC 59.962 38.462 5.58 0.00 0.00 2.17
318 319 6.512253 CGCGTCCTTTTTACCCTATAATTTCC 60.512 42.308 0.00 0.00 0.00 3.13
319 320 6.238842 GCGTCCTTTTTACCCTATAATTTCCC 60.239 42.308 0.00 0.00 0.00 3.97
320 321 6.017687 CGTCCTTTTTACCCTATAATTTCCCG 60.018 42.308 0.00 0.00 0.00 5.14
321 322 5.829391 TCCTTTTTACCCTATAATTTCCCGC 59.171 40.000 0.00 0.00 0.00 6.13
322 323 5.278120 CCTTTTTACCCTATAATTTCCCGCG 60.278 44.000 0.00 0.00 0.00 6.46
323 324 3.405823 TTACCCTATAATTTCCCGCGG 57.594 47.619 21.04 21.04 0.00 6.46
324 325 0.250597 ACCCTATAATTTCCCGCGGC 60.251 55.000 22.85 0.00 0.00 6.53
325 326 1.296056 CCCTATAATTTCCCGCGGCG 61.296 60.000 22.85 16.78 0.00 6.46
327 328 0.788391 CTATAATTTCCCGCGGCGTC 59.212 55.000 22.85 0.00 0.00 5.19
328 329 0.104487 TATAATTTCCCGCGGCGTCA 59.896 50.000 22.85 2.83 0.00 4.35
329 330 1.433837 ATAATTTCCCGCGGCGTCAC 61.434 55.000 22.85 0.00 0.00 3.67
330 331 2.783241 TAATTTCCCGCGGCGTCACA 62.783 55.000 22.85 0.00 0.00 3.58
335 336 3.928769 CCGCGGCGTCACATCATG 61.929 66.667 22.00 0.00 0.00 3.07
336 337 4.580044 CGCGGCGTCACATCATGC 62.580 66.667 15.36 0.00 0.00 4.06
337 338 3.498834 GCGGCGTCACATCATGCA 61.499 61.111 9.37 0.00 0.00 3.96
338 339 2.400798 CGGCGTCACATCATGCAC 59.599 61.111 0.00 0.00 0.00 4.57
339 340 2.389809 CGGCGTCACATCATGCACA 61.390 57.895 0.00 0.00 0.00 4.57
340 341 1.135315 GGCGTCACATCATGCACAC 59.865 57.895 0.00 0.00 0.00 3.82
342 343 0.095935 GCGTCACATCATGCACACTC 59.904 55.000 0.00 0.00 0.00 3.51
343 344 1.718396 CGTCACATCATGCACACTCT 58.282 50.000 0.00 0.00 0.00 3.24
344 345 2.071540 CGTCACATCATGCACACTCTT 58.928 47.619 0.00 0.00 0.00 2.85
345 346 2.481568 CGTCACATCATGCACACTCTTT 59.518 45.455 0.00 0.00 0.00 2.52
347 348 4.330894 CGTCACATCATGCACACTCTTTAT 59.669 41.667 0.00 0.00 0.00 1.40
348 349 5.566623 GTCACATCATGCACACTCTTTATG 58.433 41.667 0.00 0.00 0.00 1.90
349 350 4.637091 TCACATCATGCACACTCTTTATGG 59.363 41.667 0.00 0.00 0.00 2.74
351 352 5.124297 CACATCATGCACACTCTTTATGGAA 59.876 40.000 0.00 0.00 0.00 3.53
352 353 5.124457 ACATCATGCACACTCTTTATGGAAC 59.876 40.000 0.00 0.00 0.00 3.62
353 354 4.009675 TCATGCACACTCTTTATGGAACC 58.990 43.478 0.00 0.00 0.00 3.62
354 355 3.500448 TGCACACTCTTTATGGAACCA 57.500 42.857 0.00 0.00 0.00 3.67
355 356 3.411446 TGCACACTCTTTATGGAACCAG 58.589 45.455 0.00 0.00 0.00 4.00
356 357 2.162408 GCACACTCTTTATGGAACCAGC 59.838 50.000 0.00 0.00 0.00 4.85
357 358 3.679389 CACACTCTTTATGGAACCAGCT 58.321 45.455 0.00 0.00 0.00 4.24
359 360 4.074970 ACACTCTTTATGGAACCAGCTTG 58.925 43.478 0.00 0.00 0.00 4.01
360 361 3.084786 ACTCTTTATGGAACCAGCTTGC 58.915 45.455 0.00 0.00 0.00 4.01
361 362 3.245052 ACTCTTTATGGAACCAGCTTGCT 60.245 43.478 0.00 0.00 0.00 3.91
364 365 4.218417 TCTTTATGGAACCAGCTTGCTTTC 59.782 41.667 0.00 0.00 0.00 2.62
365 366 1.999648 ATGGAACCAGCTTGCTTTCA 58.000 45.000 8.65 0.00 0.00 2.69
367 368 1.032014 GGAACCAGCTTGCTTTCACA 58.968 50.000 8.65 0.00 0.00 3.58
368 369 1.615392 GGAACCAGCTTGCTTTCACAT 59.385 47.619 8.65 0.00 0.00 3.21
369 370 2.352127 GGAACCAGCTTGCTTTCACATC 60.352 50.000 8.65 0.00 0.00 3.06
370 371 1.985473 ACCAGCTTGCTTTCACATCA 58.015 45.000 0.00 0.00 0.00 3.07
371 372 1.884579 ACCAGCTTGCTTTCACATCAG 59.115 47.619 0.00 0.00 0.00 2.90
372 373 1.402456 CCAGCTTGCTTTCACATCAGC 60.402 52.381 0.00 0.00 36.49 4.26
373 374 1.540267 CAGCTTGCTTTCACATCAGCT 59.460 47.619 0.00 0.00 36.92 4.24
374 375 2.745821 CAGCTTGCTTTCACATCAGCTA 59.254 45.455 0.00 0.00 36.92 3.32
376 377 3.822735 AGCTTGCTTTCACATCAGCTAAA 59.177 39.130 0.00 0.00 36.92 1.85
377 378 3.916776 GCTTGCTTTCACATCAGCTAAAC 59.083 43.478 0.00 0.00 36.92 2.01
379 380 5.512753 TTGCTTTCACATCAGCTAAACAA 57.487 34.783 0.00 0.00 36.92 2.83
380 381 5.112220 TGCTTTCACATCAGCTAAACAAG 57.888 39.130 0.00 0.00 36.92 3.16
381 382 4.022935 TGCTTTCACATCAGCTAAACAAGG 60.023 41.667 0.00 0.00 36.92 3.61
390 391 2.549754 CAGCTAAACAAGGTGTCCTGTG 59.450 50.000 0.00 0.00 46.53 3.66
391 392 1.880027 GCTAAACAAGGTGTCCTGTGG 59.120 52.381 0.00 0.00 32.13 4.17
433 434 9.289782 AGAAAAATAATAGTGATGAGTATGGCC 57.710 33.333 0.00 0.00 0.00 5.36
434 435 7.672983 AAAATAATAGTGATGAGTATGGCCG 57.327 36.000 0.00 0.00 0.00 6.13
436 437 0.679505 TAGTGATGAGTATGGCCGGC 59.320 55.000 21.18 21.18 0.00 6.13
438 439 3.044305 GATGAGTATGGCCGGCGC 61.044 66.667 22.54 14.37 0.00 6.53
440 441 3.814615 ATGAGTATGGCCGGCGCAG 62.815 63.158 22.54 4.65 36.38 5.18
441 442 4.221422 GAGTATGGCCGGCGCAGA 62.221 66.667 22.54 14.30 36.38 4.26
442 443 4.530857 AGTATGGCCGGCGCAGAC 62.531 66.667 25.72 25.72 36.38 3.51
452 453 3.121030 GCGCAGACCGAGCAACAT 61.121 61.111 0.30 0.00 40.67 2.71
453 454 3.084579 CGCAGACCGAGCAACATC 58.915 61.111 0.00 0.00 40.02 3.06
454 455 2.792290 CGCAGACCGAGCAACATCG 61.792 63.158 0.00 0.00 42.36 3.84
455 456 1.446099 GCAGACCGAGCAACATCGA 60.446 57.895 0.00 0.00 45.56 3.59
461 462 1.431488 CCGAGCAACATCGATGGTGG 61.431 60.000 37.17 23.80 45.44 4.61
462 463 0.460109 CGAGCAACATCGATGGTGGA 60.460 55.000 37.17 0.00 45.44 4.02
463 464 1.293924 GAGCAACATCGATGGTGGAG 58.706 55.000 37.17 18.51 45.44 3.86
464 465 0.615331 AGCAACATCGATGGTGGAGT 59.385 50.000 37.17 11.54 45.44 3.85
465 466 1.009829 GCAACATCGATGGTGGAGTC 58.990 55.000 37.17 21.17 45.44 3.36
466 467 1.280982 CAACATCGATGGTGGAGTCG 58.719 55.000 31.63 8.62 41.71 4.18
473 474 1.062587 CGATGGTGGAGTCGAAATTGC 59.937 52.381 0.00 0.00 40.11 3.56
474 475 2.359900 GATGGTGGAGTCGAAATTGCT 58.640 47.619 0.00 0.00 0.00 3.91
475 476 3.531538 GATGGTGGAGTCGAAATTGCTA 58.468 45.455 0.00 0.00 0.00 3.49
476 477 2.972625 TGGTGGAGTCGAAATTGCTAG 58.027 47.619 0.00 0.00 0.00 3.42
477 478 1.666189 GGTGGAGTCGAAATTGCTAGC 59.334 52.381 8.10 8.10 0.00 3.42
478 479 1.666189 GTGGAGTCGAAATTGCTAGCC 59.334 52.381 13.29 0.00 0.00 3.93
479 480 1.300481 GGAGTCGAAATTGCTAGCCC 58.700 55.000 13.29 0.00 0.00 5.19
480 481 1.406887 GGAGTCGAAATTGCTAGCCCA 60.407 52.381 13.29 0.00 0.00 5.36
481 482 2.565841 GAGTCGAAATTGCTAGCCCAT 58.434 47.619 13.29 0.94 0.00 4.00
482 483 3.494398 GGAGTCGAAATTGCTAGCCCATA 60.494 47.826 13.29 0.00 0.00 2.74
483 484 3.733337 AGTCGAAATTGCTAGCCCATAG 58.267 45.455 13.29 0.00 34.31 2.23
484 485 3.388024 AGTCGAAATTGCTAGCCCATAGA 59.612 43.478 13.29 2.03 32.76 1.98
485 486 3.743396 GTCGAAATTGCTAGCCCATAGAG 59.257 47.826 13.29 0.00 32.76 2.43
486 487 3.070018 CGAAATTGCTAGCCCATAGAGG 58.930 50.000 13.29 0.00 32.76 3.69
487 488 3.244215 CGAAATTGCTAGCCCATAGAGGA 60.244 47.826 13.29 0.00 41.22 3.71
488 489 4.718961 GAAATTGCTAGCCCATAGAGGAA 58.281 43.478 13.29 0.00 41.22 3.36
489 490 5.320277 GAAATTGCTAGCCCATAGAGGAAT 58.680 41.667 13.29 0.00 41.22 3.01
490 491 3.777106 TTGCTAGCCCATAGAGGAATG 57.223 47.619 13.29 0.00 41.22 2.67
491 492 2.976440 TGCTAGCCCATAGAGGAATGA 58.024 47.619 13.29 0.00 41.22 2.57
492 493 3.524826 TGCTAGCCCATAGAGGAATGAT 58.475 45.455 13.29 0.00 41.22 2.45
493 494 3.262660 TGCTAGCCCATAGAGGAATGATG 59.737 47.826 13.29 0.00 41.22 3.07
494 495 3.517100 GCTAGCCCATAGAGGAATGATGA 59.483 47.826 2.29 0.00 41.22 2.92
495 496 4.622695 GCTAGCCCATAGAGGAATGATGAC 60.623 50.000 2.29 0.00 41.22 3.06
496 497 2.301296 AGCCCATAGAGGAATGATGACG 59.699 50.000 0.00 0.00 41.22 4.35
498 499 3.657634 CCCATAGAGGAATGATGACGTG 58.342 50.000 0.00 0.00 41.22 4.49
502 503 2.964740 AGAGGAATGATGACGTGTGTG 58.035 47.619 0.00 0.00 0.00 3.82
503 504 1.394917 GAGGAATGATGACGTGTGTGC 59.605 52.381 0.00 0.00 0.00 4.57
506 507 0.602638 AATGATGACGTGTGTGCGGT 60.603 50.000 0.00 0.00 35.98 5.68
508 509 0.812014 TGATGACGTGTGTGCGGTTT 60.812 50.000 0.00 0.00 35.98 3.27
510 511 1.092921 ATGACGTGTGTGCGGTTTGT 61.093 50.000 0.00 0.00 35.98 2.83
511 512 1.297304 GACGTGTGTGCGGTTTGTG 60.297 57.895 0.00 0.00 35.98 3.33
512 513 1.973137 GACGTGTGTGCGGTTTGTGT 61.973 55.000 0.00 0.00 35.98 3.72
513 514 1.582424 CGTGTGTGCGGTTTGTGTG 60.582 57.895 0.00 0.00 0.00 3.82
514 515 1.226547 GTGTGTGCGGTTTGTGTGG 60.227 57.895 0.00 0.00 0.00 4.17
515 516 2.410687 TGTGTGCGGTTTGTGTGGG 61.411 57.895 0.00 0.00 0.00 4.61
518 519 1.226831 GTGCGGTTTGTGTGGGTTG 60.227 57.895 0.00 0.00 0.00 3.77
519 520 1.679305 TGCGGTTTGTGTGGGTTGT 60.679 52.632 0.00 0.00 0.00 3.32
520 521 1.065109 GCGGTTTGTGTGGGTTGTC 59.935 57.895 0.00 0.00 0.00 3.18
521 522 1.658686 GCGGTTTGTGTGGGTTGTCA 61.659 55.000 0.00 0.00 0.00 3.58
524 525 1.470051 GTTTGTGTGGGTTGTCAGGT 58.530 50.000 0.00 0.00 0.00 4.00
525 526 1.404035 GTTTGTGTGGGTTGTCAGGTC 59.596 52.381 0.00 0.00 0.00 3.85
526 527 0.462937 TTGTGTGGGTTGTCAGGTCG 60.463 55.000 0.00 0.00 0.00 4.79
528 529 2.668550 GTGGGTTGTCAGGTCGGC 60.669 66.667 0.00 0.00 0.00 5.54
529 530 3.948719 TGGGTTGTCAGGTCGGCC 61.949 66.667 0.00 0.00 0.00 6.13
531 532 2.112297 GGTTGTCAGGTCGGCCAA 59.888 61.111 9.71 0.00 37.19 4.52
532 533 1.966451 GGTTGTCAGGTCGGCCAAG 60.966 63.158 9.71 0.00 37.19 3.61
533 534 1.227853 GTTGTCAGGTCGGCCAAGT 60.228 57.895 9.71 0.00 37.19 3.16
534 535 1.227823 TTGTCAGGTCGGCCAAGTG 60.228 57.895 9.71 0.00 37.19 3.16
535 536 3.050275 GTCAGGTCGGCCAAGTGC 61.050 66.667 9.71 0.00 37.19 4.40
546 547 2.307934 GCCAAGTGCCTTGTTTTTCA 57.692 45.000 12.18 0.00 39.58 2.69
547 548 2.204237 GCCAAGTGCCTTGTTTTTCAG 58.796 47.619 12.18 0.00 39.58 3.02
548 549 2.825205 CCAAGTGCCTTGTTTTTCAGG 58.175 47.619 12.18 0.00 39.58 3.86
549 550 2.204237 CAAGTGCCTTGTTTTTCAGGC 58.796 47.619 3.08 3.08 46.82 4.85
564 565 7.714377 TGTTTTTCAGGCATGTTGTGATAATTT 59.286 29.630 0.00 0.00 0.00 1.82
586 587 9.883142 AATTTTTACCTGATTTTCTGTTCAACA 57.117 25.926 0.00 0.00 0.00 3.33
642 647 3.817647 GACAGATGCTTCCAGTTTTCACT 59.182 43.478 0.00 0.00 0.00 3.41
700 705 1.586154 GGGGTTCCAACACGCTGATG 61.586 60.000 0.00 0.00 31.52 3.07
831 846 1.067212 CCGTGACTTCCCCTTCGATAG 59.933 57.143 0.00 0.00 0.00 2.08
911 928 1.077089 GGCTTCCAAGTAGTCGCGTC 61.077 60.000 5.77 0.00 0.00 5.19
966 983 2.736144 AACCATGCTGCAAACATCAG 57.264 45.000 6.36 0.00 34.79 2.90
985 1002 2.738521 AGTTACCGTGCAGCTGCG 60.739 61.111 32.11 20.97 45.83 5.18
1086 1653 1.712018 CCATCATCGTGTGCAGCCTG 61.712 60.000 0.00 0.00 0.00 4.85
1485 2102 4.404654 GCTTTTGCGTGGCGAGGG 62.405 66.667 0.00 0.00 34.86 4.30
1486 2103 2.668212 CTTTTGCGTGGCGAGGGA 60.668 61.111 0.00 0.00 0.00 4.20
1493 2110 4.148825 GTGGCGAGGGACGAGCAT 62.149 66.667 0.00 0.00 45.77 3.79
1494 2111 2.441348 TGGCGAGGGACGAGCATA 60.441 61.111 0.00 0.00 45.77 3.14
1495 2112 2.336809 GGCGAGGGACGAGCATAG 59.663 66.667 0.00 0.00 45.77 2.23
1510 2154 4.669728 CGAGCATAGTACGTACTGCTTTAC 59.330 45.833 31.19 21.81 36.20 2.01
1528 2172 5.390991 GCTTTACAGGTTCACACTGAATAGC 60.391 44.000 0.00 0.00 38.79 2.97
1532 2176 3.681897 CAGGTTCACACTGAATAGCTGTC 59.318 47.826 0.00 0.00 38.79 3.51
1533 2177 3.324846 AGGTTCACACTGAATAGCTGTCA 59.675 43.478 0.00 0.00 38.79 3.58
1534 2178 3.433615 GGTTCACACTGAATAGCTGTCAC 59.566 47.826 0.00 0.00 38.79 3.67
1535 2179 2.946564 TCACACTGAATAGCTGTCACG 58.053 47.619 0.00 0.00 0.00 4.35
1577 2222 7.609960 TGTTGCATTCATTTATTTGCTTCCTA 58.390 30.769 0.00 0.00 36.10 2.94
1579 2224 6.264832 TGCATTCATTTATTTGCTTCCTACG 58.735 36.000 0.00 0.00 36.10 3.51
1618 2263 9.570488 AAGTAAACTTTAGTATCTAAGCGACTG 57.430 33.333 0.00 0.00 30.82 3.51
1619 2264 8.189460 AGTAAACTTTAGTATCTAAGCGACTGG 58.811 37.037 0.00 0.00 0.00 4.00
1620 2265 5.517322 ACTTTAGTATCTAAGCGACTGGG 57.483 43.478 0.00 0.00 0.00 4.45
1621 2266 4.202131 ACTTTAGTATCTAAGCGACTGGGC 60.202 45.833 0.00 0.00 0.00 5.36
1622 2267 1.776662 AGTATCTAAGCGACTGGGCA 58.223 50.000 0.00 0.00 34.64 5.36
1623 2268 1.683917 AGTATCTAAGCGACTGGGCAG 59.316 52.381 0.00 0.00 34.64 4.85
1624 2269 1.681793 GTATCTAAGCGACTGGGCAGA 59.318 52.381 0.00 0.00 34.64 4.26
1625 2270 1.195115 ATCTAAGCGACTGGGCAGAA 58.805 50.000 0.00 0.00 34.64 3.02
1626 2271 0.532573 TCTAAGCGACTGGGCAGAAG 59.467 55.000 0.00 0.00 34.64 2.85
1627 2272 0.532573 CTAAGCGACTGGGCAGAAGA 59.467 55.000 0.00 0.00 34.64 2.87
1628 2273 0.973632 TAAGCGACTGGGCAGAAGAA 59.026 50.000 0.00 0.00 34.64 2.52
1629 2274 0.321122 AAGCGACTGGGCAGAAGAAG 60.321 55.000 0.00 0.00 34.64 2.85
1630 2275 1.743252 GCGACTGGGCAGAAGAAGG 60.743 63.158 0.00 0.00 0.00 3.46
1631 2276 1.743252 CGACTGGGCAGAAGAAGGC 60.743 63.158 0.00 0.00 0.00 4.35
1632 2277 1.376466 GACTGGGCAGAAGAAGGCA 59.624 57.895 0.00 0.00 0.00 4.75
1633 2278 0.676151 GACTGGGCAGAAGAAGGCAG 60.676 60.000 0.00 0.00 0.00 4.85
1634 2279 1.378250 CTGGGCAGAAGAAGGCAGG 60.378 63.158 0.00 0.00 0.00 4.85
1635 2280 1.845627 CTGGGCAGAAGAAGGCAGGA 61.846 60.000 0.00 0.00 0.00 3.86
1636 2281 1.380302 GGGCAGAAGAAGGCAGGAA 59.620 57.895 0.00 0.00 0.00 3.36
1637 2282 0.033699 GGGCAGAAGAAGGCAGGAAT 60.034 55.000 0.00 0.00 0.00 3.01
1638 2283 1.101331 GGCAGAAGAAGGCAGGAATG 58.899 55.000 0.00 0.00 0.00 2.67
1639 2284 1.615384 GGCAGAAGAAGGCAGGAATGT 60.615 52.381 0.00 0.00 0.00 2.71
1640 2285 2.356125 GGCAGAAGAAGGCAGGAATGTA 60.356 50.000 0.00 0.00 0.00 2.29
1641 2286 3.549794 GCAGAAGAAGGCAGGAATGTAT 58.450 45.455 0.00 0.00 0.00 2.29
1642 2287 4.444876 GGCAGAAGAAGGCAGGAATGTATA 60.445 45.833 0.00 0.00 0.00 1.47
1643 2288 5.126067 GCAGAAGAAGGCAGGAATGTATAA 58.874 41.667 0.00 0.00 0.00 0.98
1644 2289 5.590259 GCAGAAGAAGGCAGGAATGTATAAA 59.410 40.000 0.00 0.00 0.00 1.40
1645 2290 6.264067 GCAGAAGAAGGCAGGAATGTATAAAT 59.736 38.462 0.00 0.00 0.00 1.40
1646 2291 7.646314 CAGAAGAAGGCAGGAATGTATAAATG 58.354 38.462 0.00 0.00 0.00 2.32
1647 2292 7.500227 CAGAAGAAGGCAGGAATGTATAAATGA 59.500 37.037 0.00 0.00 0.00 2.57
1648 2293 8.223330 AGAAGAAGGCAGGAATGTATAAATGAT 58.777 33.333 0.00 0.00 0.00 2.45
1649 2294 8.773033 AAGAAGGCAGGAATGTATAAATGATT 57.227 30.769 0.00 0.00 0.00 2.57
1650 2295 8.773033 AGAAGGCAGGAATGTATAAATGATTT 57.227 30.769 0.00 0.00 0.00 2.17
1651 2296 9.866655 AGAAGGCAGGAATGTATAAATGATTTA 57.133 29.630 0.00 0.00 0.00 1.40
1654 2299 9.812347 AGGCAGGAATGTATAAATGATTTATCA 57.188 29.630 13.26 11.51 41.70 2.15
1676 2321 8.918961 ATCAATCTTGTTAAGTCTTAGTCGAG 57.081 34.615 0.00 1.33 0.00 4.04
1677 2322 8.107399 TCAATCTTGTTAAGTCTTAGTCGAGA 57.893 34.615 14.06 14.06 0.00 4.04
1678 2323 8.021973 TCAATCTTGTTAAGTCTTAGTCGAGAC 58.978 37.037 14.01 0.00 45.05 3.36
1776 2423 4.872691 ACAAGAGATTACACATGTGCTAGC 59.127 41.667 25.68 15.83 0.00 3.42
1802 2449 0.971386 TCACAAGTCGACCCTAACCC 59.029 55.000 13.01 0.00 0.00 4.11
1896 2543 3.806380 CCCAAGTCCTGAGATCATCAAG 58.194 50.000 0.00 0.00 37.52 3.02
1946 2593 1.818060 TGATCAATCCGGTGCCAAAAG 59.182 47.619 0.00 0.00 0.00 2.27
2117 2764 1.529948 CCCATCCTGGCGATGCAAT 60.530 57.895 0.00 0.00 46.17 3.56
2224 2871 0.105760 TTTGGTCCTGCAACCCATGT 60.106 50.000 5.11 0.00 38.65 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.869861 GCAACTCATCAACAAAACCAACTT 59.130 37.500 0.00 0.00 0.00 2.66
1 2 4.432712 GCAACTCATCAACAAAACCAACT 58.567 39.130 0.00 0.00 0.00 3.16
4 5 2.685388 TCGCAACTCATCAACAAAACCA 59.315 40.909 0.00 0.00 0.00 3.67
7 8 5.743026 TTACTCGCAACTCATCAACAAAA 57.257 34.783 0.00 0.00 0.00 2.44
9 10 4.994217 TGATTACTCGCAACTCATCAACAA 59.006 37.500 0.00 0.00 0.00 2.83
10 11 4.565022 TGATTACTCGCAACTCATCAACA 58.435 39.130 0.00 0.00 0.00 3.33
11 12 5.063944 ACATGATTACTCGCAACTCATCAAC 59.936 40.000 0.00 0.00 0.00 3.18
12 13 5.178061 ACATGATTACTCGCAACTCATCAA 58.822 37.500 0.00 0.00 0.00 2.57
13 14 4.758688 ACATGATTACTCGCAACTCATCA 58.241 39.130 0.00 0.00 0.00 3.07
14 15 5.291858 TCAACATGATTACTCGCAACTCATC 59.708 40.000 0.00 0.00 0.00 2.92
15 16 5.178061 TCAACATGATTACTCGCAACTCAT 58.822 37.500 0.00 0.00 0.00 2.90
16 17 4.565022 TCAACATGATTACTCGCAACTCA 58.435 39.130 0.00 0.00 0.00 3.41
18 19 5.412594 ACATTCAACATGATTACTCGCAACT 59.587 36.000 0.00 0.00 0.00 3.16
19 20 5.631026 ACATTCAACATGATTACTCGCAAC 58.369 37.500 0.00 0.00 0.00 4.17
20 21 5.878332 ACATTCAACATGATTACTCGCAA 57.122 34.783 0.00 0.00 0.00 4.85
21 22 5.878332 AACATTCAACATGATTACTCGCA 57.122 34.783 0.00 0.00 0.00 5.10
22 23 5.003778 GCAAACATTCAACATGATTACTCGC 59.996 40.000 0.00 0.00 0.00 5.03
23 24 6.317088 AGCAAACATTCAACATGATTACTCG 58.683 36.000 0.00 0.00 0.00 4.18
24 25 8.430063 CAAAGCAAACATTCAACATGATTACTC 58.570 33.333 0.00 0.00 0.00 2.59
25 26 7.927629 ACAAAGCAAACATTCAACATGATTACT 59.072 29.630 0.00 0.00 0.00 2.24
26 27 8.075593 ACAAAGCAAACATTCAACATGATTAC 57.924 30.769 0.00 0.00 0.00 1.89
27 28 8.659925 AACAAAGCAAACATTCAACATGATTA 57.340 26.923 0.00 0.00 0.00 1.75
28 29 7.556733 AACAAAGCAAACATTCAACATGATT 57.443 28.000 0.00 0.00 0.00 2.57
29 30 7.254863 GGAAACAAAGCAAACATTCAACATGAT 60.255 33.333 0.00 0.00 0.00 2.45
30 31 6.036953 GGAAACAAAGCAAACATTCAACATGA 59.963 34.615 0.00 0.00 0.00 3.07
31 32 6.183360 TGGAAACAAAGCAAACATTCAACATG 60.183 34.615 0.00 0.00 37.44 3.21
32 33 5.879223 TGGAAACAAAGCAAACATTCAACAT 59.121 32.000 0.00 0.00 37.44 2.71
33 34 5.240891 TGGAAACAAAGCAAACATTCAACA 58.759 33.333 0.00 0.00 37.44 3.33
34 35 5.793026 TGGAAACAAAGCAAACATTCAAC 57.207 34.783 0.00 0.00 37.44 3.18
50 51 7.625185 GCTCTAATCACAACTCTCAATGGAAAC 60.625 40.741 0.00 0.00 0.00 2.78
51 52 6.372659 GCTCTAATCACAACTCTCAATGGAAA 59.627 38.462 0.00 0.00 0.00 3.13
52 53 5.877012 GCTCTAATCACAACTCTCAATGGAA 59.123 40.000 0.00 0.00 0.00 3.53
53 54 5.188555 AGCTCTAATCACAACTCTCAATGGA 59.811 40.000 0.00 0.00 0.00 3.41
55 56 6.104665 TCAGCTCTAATCACAACTCTCAATG 58.895 40.000 0.00 0.00 0.00 2.82
56 57 6.291648 TCAGCTCTAATCACAACTCTCAAT 57.708 37.500 0.00 0.00 0.00 2.57
57 58 5.728637 TCAGCTCTAATCACAACTCTCAA 57.271 39.130 0.00 0.00 0.00 3.02
58 59 5.728637 TTCAGCTCTAATCACAACTCTCA 57.271 39.130 0.00 0.00 0.00 3.27
59 60 7.978975 ACTATTTCAGCTCTAATCACAACTCTC 59.021 37.037 0.00 0.00 0.00 3.20
60 61 7.846066 ACTATTTCAGCTCTAATCACAACTCT 58.154 34.615 0.00 0.00 0.00 3.24
61 62 9.243637 CTACTATTTCAGCTCTAATCACAACTC 57.756 37.037 0.00 0.00 0.00 3.01
62 63 8.200792 CCTACTATTTCAGCTCTAATCACAACT 58.799 37.037 0.00 0.00 0.00 3.16
64 65 7.344612 TCCCTACTATTTCAGCTCTAATCACAA 59.655 37.037 0.00 0.00 0.00 3.33
65 66 6.839134 TCCCTACTATTTCAGCTCTAATCACA 59.161 38.462 0.00 0.00 0.00 3.58
68 69 7.327214 CCATCCCTACTATTTCAGCTCTAATC 58.673 42.308 0.00 0.00 0.00 1.75
69 70 6.214412 CCCATCCCTACTATTTCAGCTCTAAT 59.786 42.308 0.00 0.00 0.00 1.73
70 71 5.544176 CCCATCCCTACTATTTCAGCTCTAA 59.456 44.000 0.00 0.00 0.00 2.10
71 72 5.087323 CCCATCCCTACTATTTCAGCTCTA 58.913 45.833 0.00 0.00 0.00 2.43
72 73 3.906846 CCCATCCCTACTATTTCAGCTCT 59.093 47.826 0.00 0.00 0.00 4.09
73 74 3.008485 CCCCATCCCTACTATTTCAGCTC 59.992 52.174 0.00 0.00 0.00 4.09
75 76 2.553247 GCCCCATCCCTACTATTTCAGC 60.553 54.545 0.00 0.00 0.00 4.26
76 77 2.289694 CGCCCCATCCCTACTATTTCAG 60.290 54.545 0.00 0.00 0.00 3.02
77 78 1.697432 CGCCCCATCCCTACTATTTCA 59.303 52.381 0.00 0.00 0.00 2.69
78 79 1.697982 ACGCCCCATCCCTACTATTTC 59.302 52.381 0.00 0.00 0.00 2.17
79 80 1.420138 CACGCCCCATCCCTACTATTT 59.580 52.381 0.00 0.00 0.00 1.40
80 81 1.056660 CACGCCCCATCCCTACTATT 58.943 55.000 0.00 0.00 0.00 1.73
81 82 0.190069 TCACGCCCCATCCCTACTAT 59.810 55.000 0.00 0.00 0.00 2.12
83 84 1.762460 CTCACGCCCCATCCCTACT 60.762 63.158 0.00 0.00 0.00 2.57
85 86 3.161450 GCTCACGCCCCATCCCTA 61.161 66.667 0.00 0.00 0.00 3.53
88 89 2.124151 AATGCTCACGCCCCATCC 60.124 61.111 0.00 0.00 34.43 3.51
89 90 2.484062 CCAATGCTCACGCCCCATC 61.484 63.158 0.00 0.00 34.43 3.51
90 91 2.440796 CCAATGCTCACGCCCCAT 60.441 61.111 0.00 0.00 34.43 4.00
93 94 3.372730 TTGCCAATGCTCACGCCC 61.373 61.111 0.00 0.00 38.71 6.13
94 95 2.126346 GTTGCCAATGCTCACGCC 60.126 61.111 0.00 0.00 38.71 5.68
95 96 1.005294 CTTGTTGCCAATGCTCACGC 61.005 55.000 0.00 0.00 38.71 5.34
101 102 2.145536 CCCTTTTCTTGTTGCCAATGC 58.854 47.619 0.00 0.00 38.26 3.56
102 103 3.555586 CCTCCCTTTTCTTGTTGCCAATG 60.556 47.826 0.00 0.00 0.00 2.82
103 104 2.634453 CCTCCCTTTTCTTGTTGCCAAT 59.366 45.455 0.00 0.00 0.00 3.16
104 105 2.038659 CCTCCCTTTTCTTGTTGCCAA 58.961 47.619 0.00 0.00 0.00 4.52
105 106 1.703411 CCTCCCTTTTCTTGTTGCCA 58.297 50.000 0.00 0.00 0.00 4.92
108 109 3.575687 AGATTGCCTCCCTTTTCTTGTTG 59.424 43.478 0.00 0.00 0.00 3.33
109 110 3.849527 AGATTGCCTCCCTTTTCTTGTT 58.150 40.909 0.00 0.00 0.00 2.83
110 111 3.532641 AGATTGCCTCCCTTTTCTTGT 57.467 42.857 0.00 0.00 0.00 3.16
111 112 4.184079 CAAGATTGCCTCCCTTTTCTTG 57.816 45.455 0.00 0.00 35.59 3.02
126 127 3.840666 TCCTCTGGTTCACTAGCAAGATT 59.159 43.478 0.00 0.00 33.04 2.40
127 128 3.445008 TCCTCTGGTTCACTAGCAAGAT 58.555 45.455 0.00 0.00 33.04 2.40
128 129 2.828520 CTCCTCTGGTTCACTAGCAAGA 59.171 50.000 0.00 0.00 33.04 3.02
131 132 1.561643 CCTCCTCTGGTTCACTAGCA 58.438 55.000 0.00 0.00 0.00 3.49
133 134 1.490574 CCCCTCCTCTGGTTCACTAG 58.509 60.000 0.00 0.00 0.00 2.57
135 136 1.229658 CCCCCTCCTCTGGTTCACT 60.230 63.158 0.00 0.00 0.00 3.41
136 137 1.229529 TCCCCCTCCTCTGGTTCAC 60.230 63.158 0.00 0.00 0.00 3.18
137 138 1.229529 GTCCCCCTCCTCTGGTTCA 60.230 63.158 0.00 0.00 0.00 3.18
138 139 0.621862 ATGTCCCCCTCCTCTGGTTC 60.622 60.000 0.00 0.00 0.00 3.62
139 140 0.621862 GATGTCCCCCTCCTCTGGTT 60.622 60.000 0.00 0.00 0.00 3.67
140 141 1.003573 GATGTCCCCCTCCTCTGGT 59.996 63.158 0.00 0.00 0.00 4.00
142 143 3.978164 GGATGTCCCCCTCCTCTG 58.022 66.667 0.00 0.00 0.00 3.35
152 153 1.225704 CCAGCTTCCAGGGATGTCC 59.774 63.158 3.51 0.00 0.00 4.02
154 155 0.329596 GTTCCAGCTTCCAGGGATGT 59.670 55.000 3.51 0.00 0.00 3.06
155 156 0.394899 GGTTCCAGCTTCCAGGGATG 60.395 60.000 0.00 0.00 0.00 3.51
156 157 1.575447 GGGTTCCAGCTTCCAGGGAT 61.575 60.000 0.00 0.00 0.00 3.85
157 158 2.231380 GGGTTCCAGCTTCCAGGGA 61.231 63.158 0.00 0.00 0.00 4.20
158 159 2.356667 GGGTTCCAGCTTCCAGGG 59.643 66.667 0.00 0.00 0.00 4.45
160 161 2.045926 CCGGGTTCCAGCTTCCAG 60.046 66.667 0.00 0.00 0.00 3.86
161 162 2.852075 ACCGGGTTCCAGCTTCCA 60.852 61.111 6.32 0.00 0.00 3.53
163 164 1.376037 CTGACCGGGTTCCAGCTTC 60.376 63.158 6.32 0.00 0.00 3.86
164 165 0.834687 TACTGACCGGGTTCCAGCTT 60.835 55.000 14.05 1.24 0.00 3.74
165 166 0.617820 ATACTGACCGGGTTCCAGCT 60.618 55.000 14.05 6.16 0.00 4.24
167 168 1.278127 ACAATACTGACCGGGTTCCAG 59.722 52.381 6.32 12.87 0.00 3.86
168 169 1.354101 ACAATACTGACCGGGTTCCA 58.646 50.000 6.32 0.00 0.00 3.53
169 170 2.027469 AGAACAATACTGACCGGGTTCC 60.027 50.000 6.32 0.00 36.25 3.62
171 172 3.071892 TGAAGAACAATACTGACCGGGTT 59.928 43.478 6.32 0.00 0.00 4.11
172 173 2.635915 TGAAGAACAATACTGACCGGGT 59.364 45.455 6.32 0.00 0.00 5.28
173 174 3.328382 TGAAGAACAATACTGACCGGG 57.672 47.619 6.32 0.00 0.00 5.73
174 175 3.623060 CCATGAAGAACAATACTGACCGG 59.377 47.826 0.00 0.00 0.00 5.28
176 177 5.582665 GTCTCCATGAAGAACAATACTGACC 59.417 44.000 0.00 0.00 0.00 4.02
178 179 6.358974 TGTCTCCATGAAGAACAATACTGA 57.641 37.500 0.00 0.00 0.00 3.41
180 181 6.773638 AGTTGTCTCCATGAAGAACAATACT 58.226 36.000 0.00 0.00 0.00 2.12
182 183 6.998074 ACAAGTTGTCTCCATGAAGAACAATA 59.002 34.615 1.64 0.00 0.00 1.90
183 184 5.829924 ACAAGTTGTCTCCATGAAGAACAAT 59.170 36.000 1.64 0.00 0.00 2.71
185 186 4.576053 CACAAGTTGTCTCCATGAAGAACA 59.424 41.667 5.27 0.00 0.00 3.18
186 187 4.023707 CCACAAGTTGTCTCCATGAAGAAC 60.024 45.833 5.27 0.00 0.00 3.01
187 188 4.136796 CCACAAGTTGTCTCCATGAAGAA 58.863 43.478 5.27 0.00 0.00 2.52
189 190 2.227388 GCCACAAGTTGTCTCCATGAAG 59.773 50.000 5.27 0.00 0.00 3.02
190 191 2.158623 AGCCACAAGTTGTCTCCATGAA 60.159 45.455 5.27 0.00 0.00 2.57
191 192 1.421268 AGCCACAAGTTGTCTCCATGA 59.579 47.619 5.27 0.00 0.00 3.07
193 194 1.421268 TGAGCCACAAGTTGTCTCCAT 59.579 47.619 17.54 0.26 0.00 3.41
196 197 4.509600 GCTATATGAGCCACAAGTTGTCTC 59.490 45.833 14.76 14.76 46.41 3.36
198 199 4.802876 GCTATATGAGCCACAAGTTGTC 57.197 45.455 5.27 0.00 46.41 3.18
218 219 4.357918 TTCTTTATCCTAGGCATGAGGC 57.642 45.455 2.96 0.00 43.74 4.70
219 220 4.699257 GCATTCTTTATCCTAGGCATGAGG 59.301 45.833 2.96 0.00 35.17 3.86
220 221 4.699257 GGCATTCTTTATCCTAGGCATGAG 59.301 45.833 2.96 0.00 0.00 2.90
221 222 4.104579 TGGCATTCTTTATCCTAGGCATGA 59.895 41.667 2.96 0.00 0.00 3.07
222 223 4.401022 TGGCATTCTTTATCCTAGGCATG 58.599 43.478 2.96 0.00 0.00 4.06
223 224 4.729552 TGGCATTCTTTATCCTAGGCAT 57.270 40.909 2.96 1.33 0.00 4.40
226 227 5.733373 GCGTTTTGGCATTCTTTATCCTAGG 60.733 44.000 0.82 0.82 0.00 3.02
228 229 4.702612 TGCGTTTTGGCATTCTTTATCCTA 59.297 37.500 0.00 0.00 38.17 2.94
229 230 3.509575 TGCGTTTTGGCATTCTTTATCCT 59.490 39.130 0.00 0.00 38.17 3.24
230 231 3.843999 TGCGTTTTGGCATTCTTTATCC 58.156 40.909 0.00 0.00 38.17 2.59
232 233 3.679502 GCTTGCGTTTTGGCATTCTTTAT 59.320 39.130 0.00 0.00 43.52 1.40
233 234 3.056304 GCTTGCGTTTTGGCATTCTTTA 58.944 40.909 0.00 0.00 43.52 1.85
234 235 1.866601 GCTTGCGTTTTGGCATTCTTT 59.133 42.857 0.00 0.00 43.52 2.52
235 236 1.501169 GCTTGCGTTTTGGCATTCTT 58.499 45.000 0.00 0.00 43.52 2.52
236 237 0.664166 CGCTTGCGTTTTGGCATTCT 60.664 50.000 6.86 0.00 43.52 2.40
239 240 2.734346 GCGCTTGCGTTTTGGCAT 60.734 55.556 16.38 0.00 43.52 4.40
240 241 4.940593 GGCGCTTGCGTTTTGGCA 62.941 61.111 16.38 0.00 42.12 4.92
242 243 3.977244 AGGGCGCTTGCGTTTTGG 61.977 61.111 16.38 0.00 40.46 3.28
244 245 4.645921 GCAGGGCGCTTGCGTTTT 62.646 61.111 18.65 0.00 40.46 2.43
250 251 2.315781 TATCTCTGGCAGGGCGCTTG 62.316 60.000 15.73 7.79 41.91 4.01
251 252 2.037620 CTATCTCTGGCAGGGCGCTT 62.038 60.000 15.73 0.00 41.91 4.68
252 253 2.444706 TATCTCTGGCAGGGCGCT 60.445 61.111 15.73 0.00 41.91 5.92
253 254 2.030262 CTATCTCTGGCAGGGCGC 59.970 66.667 15.73 0.00 41.28 6.53
254 255 2.030262 GCTATCTCTGGCAGGGCG 59.970 66.667 15.73 4.23 0.00 6.13
255 256 2.030262 CGCTATCTCTGGCAGGGC 59.970 66.667 15.73 10.32 0.00 5.19
256 257 1.112315 AGTCGCTATCTCTGGCAGGG 61.112 60.000 15.73 12.34 0.00 4.45
259 260 1.474330 TGAAGTCGCTATCTCTGGCA 58.526 50.000 0.00 0.00 0.00 4.92
260 261 2.223923 ACATGAAGTCGCTATCTCTGGC 60.224 50.000 0.00 0.00 0.00 4.85
262 263 4.024809 TCGTACATGAAGTCGCTATCTCTG 60.025 45.833 0.00 0.00 0.00 3.35
263 264 4.127907 TCGTACATGAAGTCGCTATCTCT 58.872 43.478 0.00 0.00 0.00 3.10
264 265 4.459606 CTCGTACATGAAGTCGCTATCTC 58.540 47.826 0.00 0.00 0.00 2.75
265 266 3.251245 CCTCGTACATGAAGTCGCTATCT 59.749 47.826 0.00 0.00 0.00 1.98
266 267 3.003482 ACCTCGTACATGAAGTCGCTATC 59.997 47.826 0.00 0.00 0.00 2.08
267 268 2.950309 ACCTCGTACATGAAGTCGCTAT 59.050 45.455 0.00 0.00 0.00 2.97
268 269 2.362736 ACCTCGTACATGAAGTCGCTA 58.637 47.619 0.00 0.00 0.00 4.26
269 270 1.174783 ACCTCGTACATGAAGTCGCT 58.825 50.000 0.00 0.00 0.00 4.93
271 272 3.211803 TGAACCTCGTACATGAAGTCG 57.788 47.619 0.00 0.00 0.00 4.18
272 273 3.364023 CGTTGAACCTCGTACATGAAGTC 59.636 47.826 0.00 0.00 0.00 3.01
273 274 3.314553 CGTTGAACCTCGTACATGAAGT 58.685 45.455 0.00 0.00 0.00 3.01
274 275 2.092211 GCGTTGAACCTCGTACATGAAG 59.908 50.000 0.00 0.00 0.00 3.02
275 276 2.063266 GCGTTGAACCTCGTACATGAA 58.937 47.619 0.00 0.00 0.00 2.57
277 278 0.365523 CGCGTTGAACCTCGTACATG 59.634 55.000 0.00 0.00 0.00 3.21
278 279 0.038892 ACGCGTTGAACCTCGTACAT 60.039 50.000 5.58 0.00 33.02 2.29
279 280 0.661187 GACGCGTTGAACCTCGTACA 60.661 55.000 15.53 0.00 35.12 2.90
280 281 1.339946 GGACGCGTTGAACCTCGTAC 61.340 60.000 15.53 7.14 35.12 3.67
281 282 1.081242 GGACGCGTTGAACCTCGTA 60.081 57.895 15.53 0.00 35.12 3.43
282 283 2.355481 GGACGCGTTGAACCTCGT 60.355 61.111 15.53 9.46 37.92 4.18
284 285 0.942252 AAAAGGACGCGTTGAACCTC 59.058 50.000 15.53 0.00 31.89 3.85
287 288 2.602933 GGGTAAAAAGGACGCGTTGAAC 60.603 50.000 15.53 4.49 0.00 3.18
289 290 1.202675 AGGGTAAAAAGGACGCGTTGA 60.203 47.619 15.53 0.00 35.08 3.18
292 293 4.470334 TTATAGGGTAAAAAGGACGCGT 57.530 40.909 13.85 13.85 35.08 6.01
293 294 5.996669 AATTATAGGGTAAAAAGGACGCG 57.003 39.130 3.53 3.53 35.08 6.01
294 295 6.238842 GGGAAATTATAGGGTAAAAAGGACGC 60.239 42.308 0.00 0.00 0.00 5.19
295 296 6.017687 CGGGAAATTATAGGGTAAAAAGGACG 60.018 42.308 0.00 0.00 0.00 4.79
296 297 6.238842 GCGGGAAATTATAGGGTAAAAAGGAC 60.239 42.308 0.00 0.00 0.00 3.85
298 299 5.278120 CGCGGGAAATTATAGGGTAAAAAGG 60.278 44.000 0.00 0.00 0.00 3.11
299 300 5.278120 CCGCGGGAAATTATAGGGTAAAAAG 60.278 44.000 20.10 0.00 0.00 2.27
300 301 4.579753 CCGCGGGAAATTATAGGGTAAAAA 59.420 41.667 20.10 0.00 0.00 1.94
301 302 4.136051 CCGCGGGAAATTATAGGGTAAAA 58.864 43.478 20.10 0.00 0.00 1.52
302 303 3.742385 CCGCGGGAAATTATAGGGTAAA 58.258 45.455 20.10 0.00 0.00 2.01
303 304 2.550639 GCCGCGGGAAATTATAGGGTAA 60.551 50.000 29.38 0.00 0.00 2.85
305 306 0.250597 GCCGCGGGAAATTATAGGGT 60.251 55.000 29.38 0.00 0.00 4.34
306 307 1.296056 CGCCGCGGGAAATTATAGGG 61.296 60.000 29.38 0.23 0.00 3.53
307 308 0.601841 ACGCCGCGGGAAATTATAGG 60.602 55.000 29.38 0.00 0.00 2.57
308 309 0.788391 GACGCCGCGGGAAATTATAG 59.212 55.000 29.38 0.00 0.00 1.31
309 310 0.104487 TGACGCCGCGGGAAATTATA 59.896 50.000 29.38 0.00 0.00 0.98
310 311 1.153329 TGACGCCGCGGGAAATTAT 60.153 52.632 29.38 0.00 0.00 1.28
312 313 3.428282 GTGACGCCGCGGGAAATT 61.428 61.111 29.38 0.33 0.00 1.82
313 314 3.969250 ATGTGACGCCGCGGGAAAT 62.969 57.895 29.38 8.01 0.00 2.17
318 319 3.928769 CATGATGTGACGCCGCGG 61.929 66.667 24.05 24.05 0.00 6.46
319 320 4.580044 GCATGATGTGACGCCGCG 62.580 66.667 12.14 12.14 0.00 6.46
320 321 3.498834 TGCATGATGTGACGCCGC 61.499 61.111 0.00 0.00 0.00 6.53
321 322 2.389809 TGTGCATGATGTGACGCCG 61.390 57.895 0.00 0.00 0.00 6.46
322 323 1.135315 GTGTGCATGATGTGACGCC 59.865 57.895 0.00 0.00 0.00 5.68
323 324 0.095935 GAGTGTGCATGATGTGACGC 59.904 55.000 0.00 0.00 0.00 5.19
324 325 1.718396 AGAGTGTGCATGATGTGACG 58.282 50.000 0.00 0.00 0.00 4.35
325 326 5.448225 CCATAAAGAGTGTGCATGATGTGAC 60.448 44.000 0.00 0.00 0.00 3.67
327 328 4.637091 TCCATAAAGAGTGTGCATGATGTG 59.363 41.667 0.00 0.00 0.00 3.21
328 329 4.847198 TCCATAAAGAGTGTGCATGATGT 58.153 39.130 0.00 0.00 0.00 3.06
329 330 5.449588 GGTTCCATAAAGAGTGTGCATGATG 60.450 44.000 0.00 0.00 0.00 3.07
330 331 4.641989 GGTTCCATAAAGAGTGTGCATGAT 59.358 41.667 0.00 0.00 0.00 2.45
333 334 4.012374 CTGGTTCCATAAAGAGTGTGCAT 58.988 43.478 0.00 0.00 0.00 3.96
334 335 3.411446 CTGGTTCCATAAAGAGTGTGCA 58.589 45.455 0.00 0.00 0.00 4.57
335 336 2.162408 GCTGGTTCCATAAAGAGTGTGC 59.838 50.000 0.00 0.00 0.00 4.57
336 337 3.679389 AGCTGGTTCCATAAAGAGTGTG 58.321 45.455 0.00 0.00 0.00 3.82
337 338 4.074970 CAAGCTGGTTCCATAAAGAGTGT 58.925 43.478 0.00 0.00 0.00 3.55
338 339 3.119708 GCAAGCTGGTTCCATAAAGAGTG 60.120 47.826 0.00 0.00 0.00 3.51
339 340 3.084786 GCAAGCTGGTTCCATAAAGAGT 58.915 45.455 0.00 0.00 0.00 3.24
340 341 3.350833 AGCAAGCTGGTTCCATAAAGAG 58.649 45.455 0.00 0.00 0.00 2.85
342 343 4.022068 TGAAAGCAAGCTGGTTCCATAAAG 60.022 41.667 0.00 0.00 37.04 1.85
343 344 3.894427 TGAAAGCAAGCTGGTTCCATAAA 59.106 39.130 0.00 0.00 37.04 1.40
344 345 3.255642 GTGAAAGCAAGCTGGTTCCATAA 59.744 43.478 0.00 0.00 37.04 1.90
345 346 2.819608 GTGAAAGCAAGCTGGTTCCATA 59.180 45.455 0.00 0.00 37.04 2.74
347 348 1.032014 GTGAAAGCAAGCTGGTTCCA 58.968 50.000 0.00 0.00 37.04 3.53
348 349 1.032014 TGTGAAAGCAAGCTGGTTCC 58.968 50.000 0.00 0.00 37.04 3.62
349 350 2.294233 TGATGTGAAAGCAAGCTGGTTC 59.706 45.455 0.00 0.00 37.04 3.62
351 352 1.884579 CTGATGTGAAAGCAAGCTGGT 59.115 47.619 0.00 0.00 0.00 4.00
352 353 1.402456 GCTGATGTGAAAGCAAGCTGG 60.402 52.381 0.00 0.00 39.31 4.85
353 354 1.540267 AGCTGATGTGAAAGCAAGCTG 59.460 47.619 0.00 0.00 42.06 4.24
354 355 1.906990 AGCTGATGTGAAAGCAAGCT 58.093 45.000 0.00 0.00 42.06 3.74
355 356 3.837213 TTAGCTGATGTGAAAGCAAGC 57.163 42.857 0.00 0.00 42.06 4.01
356 357 5.112220 TGTTTAGCTGATGTGAAAGCAAG 57.888 39.130 0.00 0.00 42.06 4.01
357 358 5.507817 CCTTGTTTAGCTGATGTGAAAGCAA 60.508 40.000 0.00 0.00 42.06 3.91
359 360 4.022849 ACCTTGTTTAGCTGATGTGAAAGC 60.023 41.667 0.00 0.00 39.82 3.51
360 361 5.009010 ACACCTTGTTTAGCTGATGTGAAAG 59.991 40.000 0.00 0.00 0.00 2.62
361 362 4.887071 ACACCTTGTTTAGCTGATGTGAAA 59.113 37.500 0.00 0.00 0.00 2.69
364 365 3.189287 GGACACCTTGTTTAGCTGATGTG 59.811 47.826 0.00 0.00 0.00 3.21
365 366 3.073062 AGGACACCTTGTTTAGCTGATGT 59.927 43.478 0.00 0.00 0.00 3.06
367 368 3.073062 ACAGGACACCTTGTTTAGCTGAT 59.927 43.478 0.00 0.00 0.00 2.90
368 369 2.438021 ACAGGACACCTTGTTTAGCTGA 59.562 45.455 0.00 0.00 0.00 4.26
369 370 2.549754 CACAGGACACCTTGTTTAGCTG 59.450 50.000 0.00 0.00 0.00 4.24
370 371 2.487265 CCACAGGACACCTTGTTTAGCT 60.487 50.000 0.00 0.00 0.00 3.32
371 372 1.880027 CCACAGGACACCTTGTTTAGC 59.120 52.381 0.00 0.00 0.00 3.09
372 373 3.485463 TCCACAGGACACCTTGTTTAG 57.515 47.619 0.00 0.00 0.00 1.85
407 408 9.289782 GGCCATACTCATCACTATTATTTTTCT 57.710 33.333 0.00 0.00 0.00 2.52
408 409 8.230486 CGGCCATACTCATCACTATTATTTTTC 58.770 37.037 2.24 0.00 0.00 2.29
409 410 7.174946 CCGGCCATACTCATCACTATTATTTTT 59.825 37.037 2.24 0.00 0.00 1.94
411 412 6.173339 CCGGCCATACTCATCACTATTATTT 58.827 40.000 2.24 0.00 0.00 1.40
413 414 4.383118 GCCGGCCATACTCATCACTATTAT 60.383 45.833 18.11 0.00 0.00 1.28
415 416 2.289694 GCCGGCCATACTCATCACTATT 60.290 50.000 18.11 0.00 0.00 1.73
417 418 0.679505 GCCGGCCATACTCATCACTA 59.320 55.000 18.11 0.00 0.00 2.74
418 419 1.447643 GCCGGCCATACTCATCACT 59.552 57.895 18.11 0.00 0.00 3.41
419 420 1.956170 CGCCGGCCATACTCATCAC 60.956 63.158 23.46 0.00 0.00 3.06
420 421 2.421314 CGCCGGCCATACTCATCA 59.579 61.111 23.46 0.00 0.00 3.07
421 422 3.044305 GCGCCGGCCATACTCATC 61.044 66.667 23.46 0.00 0.00 2.92
423 424 4.529219 CTGCGCCGGCCATACTCA 62.529 66.667 23.46 8.33 38.85 3.41
424 425 4.221422 TCTGCGCCGGCCATACTC 62.221 66.667 23.46 3.65 38.85 2.59
436 437 2.792290 CGATGTTGCTCGGTCTGCG 61.792 63.158 0.00 0.00 35.03 5.18
438 439 0.926155 CATCGATGTTGCTCGGTCTG 59.074 55.000 17.50 0.00 39.13 3.51
440 441 0.460284 ACCATCGATGTTGCTCGGTC 60.460 55.000 23.27 0.00 39.13 4.79
441 442 0.740868 CACCATCGATGTTGCTCGGT 60.741 55.000 23.27 9.90 39.13 4.69
442 443 1.431488 CCACCATCGATGTTGCTCGG 61.431 60.000 23.27 9.24 39.13 4.63
444 445 1.293924 CTCCACCATCGATGTTGCTC 58.706 55.000 23.27 0.00 0.00 4.26
445 446 0.615331 ACTCCACCATCGATGTTGCT 59.385 50.000 23.27 2.79 0.00 3.91
447 448 1.135112 TCGACTCCACCATCGATGTTG 60.135 52.381 23.27 19.39 42.18 3.33
448 449 1.182667 TCGACTCCACCATCGATGTT 58.817 50.000 23.27 7.21 42.18 2.71
449 450 1.182667 TTCGACTCCACCATCGATGT 58.817 50.000 23.27 9.39 46.03 3.06
450 451 2.293677 TTTCGACTCCACCATCGATG 57.706 50.000 18.76 18.76 46.03 3.84
451 452 3.198068 CAATTTCGACTCCACCATCGAT 58.802 45.455 0.00 0.00 46.03 3.59
452 453 2.616960 CAATTTCGACTCCACCATCGA 58.383 47.619 0.00 0.00 45.17 3.59
453 454 1.062587 GCAATTTCGACTCCACCATCG 59.937 52.381 0.00 0.00 39.72 3.84
454 455 2.359900 AGCAATTTCGACTCCACCATC 58.640 47.619 0.00 0.00 0.00 3.51
455 456 2.496899 AGCAATTTCGACTCCACCAT 57.503 45.000 0.00 0.00 0.00 3.55
460 461 1.300481 GGGCTAGCAATTTCGACTCC 58.700 55.000 18.24 0.00 0.00 3.85
461 462 2.024176 TGGGCTAGCAATTTCGACTC 57.976 50.000 18.24 0.00 0.00 3.36
462 463 2.717639 ATGGGCTAGCAATTTCGACT 57.282 45.000 18.24 0.00 0.00 4.18
463 464 3.728845 TCTATGGGCTAGCAATTTCGAC 58.271 45.455 18.24 0.00 0.00 4.20
464 465 3.244215 CCTCTATGGGCTAGCAATTTCGA 60.244 47.826 18.24 4.51 0.00 3.71
465 466 3.070018 CCTCTATGGGCTAGCAATTTCG 58.930 50.000 18.24 0.00 0.00 3.46
466 467 4.357918 TCCTCTATGGGCTAGCAATTTC 57.642 45.455 18.24 0.00 36.20 2.17
467 468 4.796110 TTCCTCTATGGGCTAGCAATTT 57.204 40.909 18.24 0.34 36.20 1.82
468 469 4.352001 TCATTCCTCTATGGGCTAGCAATT 59.648 41.667 18.24 2.28 36.20 2.32
469 470 3.912528 TCATTCCTCTATGGGCTAGCAAT 59.087 43.478 18.24 11.99 36.20 3.56
473 474 4.381398 CGTCATCATTCCTCTATGGGCTAG 60.381 50.000 0.00 0.00 36.20 3.42
474 475 3.511540 CGTCATCATTCCTCTATGGGCTA 59.488 47.826 0.00 0.00 36.20 3.93
475 476 2.301296 CGTCATCATTCCTCTATGGGCT 59.699 50.000 0.00 0.00 36.20 5.19
476 477 2.037772 ACGTCATCATTCCTCTATGGGC 59.962 50.000 0.00 0.00 36.20 5.36
477 478 3.070159 ACACGTCATCATTCCTCTATGGG 59.930 47.826 0.00 0.00 36.20 4.00
478 479 4.053983 CACACGTCATCATTCCTCTATGG 58.946 47.826 0.00 0.00 37.10 2.74
479 480 4.505556 CACACACGTCATCATTCCTCTATG 59.494 45.833 0.00 0.00 0.00 2.23
480 481 4.686972 CACACACGTCATCATTCCTCTAT 58.313 43.478 0.00 0.00 0.00 1.98
481 482 3.676049 GCACACACGTCATCATTCCTCTA 60.676 47.826 0.00 0.00 0.00 2.43
482 483 2.932622 GCACACACGTCATCATTCCTCT 60.933 50.000 0.00 0.00 0.00 3.69
483 484 1.394917 GCACACACGTCATCATTCCTC 59.605 52.381 0.00 0.00 0.00 3.71
484 485 1.442769 GCACACACGTCATCATTCCT 58.557 50.000 0.00 0.00 0.00 3.36
485 486 0.095245 CGCACACACGTCATCATTCC 59.905 55.000 0.00 0.00 0.00 3.01
486 487 0.095245 CCGCACACACGTCATCATTC 59.905 55.000 0.00 0.00 0.00 2.67
487 488 0.602638 ACCGCACACACGTCATCATT 60.603 50.000 0.00 0.00 0.00 2.57
488 489 0.602638 AACCGCACACACGTCATCAT 60.603 50.000 0.00 0.00 0.00 2.45
489 490 0.812014 AAACCGCACACACGTCATCA 60.812 50.000 0.00 0.00 0.00 3.07
490 491 0.384230 CAAACCGCACACACGTCATC 60.384 55.000 0.00 0.00 0.00 2.92
491 492 1.092921 ACAAACCGCACACACGTCAT 61.093 50.000 0.00 0.00 0.00 3.06
492 493 1.742140 ACAAACCGCACACACGTCA 60.742 52.632 0.00 0.00 0.00 4.35
493 494 1.297304 CACAAACCGCACACACGTC 60.297 57.895 0.00 0.00 0.00 4.34
494 495 2.036006 ACACAAACCGCACACACGT 61.036 52.632 0.00 0.00 0.00 4.49
495 496 1.582424 CACACAAACCGCACACACG 60.582 57.895 0.00 0.00 0.00 4.49
496 497 1.226547 CCACACAAACCGCACACAC 60.227 57.895 0.00 0.00 0.00 3.82
498 499 1.939769 AACCCACACAAACCGCACAC 61.940 55.000 0.00 0.00 0.00 3.82
502 503 1.065109 GACAACCCACACAAACCGC 59.935 57.895 0.00 0.00 0.00 5.68
503 504 0.380378 CTGACAACCCACACAAACCG 59.620 55.000 0.00 0.00 0.00 4.44
506 507 1.757682 GACCTGACAACCCACACAAA 58.242 50.000 0.00 0.00 0.00 2.83
508 509 1.145156 CGACCTGACAACCCACACA 59.855 57.895 0.00 0.00 0.00 3.72
510 511 2.825982 CCGACCTGACAACCCACA 59.174 61.111 0.00 0.00 0.00 4.17
511 512 2.668550 GCCGACCTGACAACCCAC 60.669 66.667 0.00 0.00 0.00 4.61
512 513 3.948719 GGCCGACCTGACAACCCA 61.949 66.667 0.00 0.00 0.00 4.51
513 514 3.485346 TTGGCCGACCTGACAACCC 62.485 63.158 0.00 0.00 36.63 4.11
514 515 1.966451 CTTGGCCGACCTGACAACC 60.966 63.158 0.00 0.00 36.63 3.77
515 516 1.227853 ACTTGGCCGACCTGACAAC 60.228 57.895 0.00 0.00 36.63 3.32
518 519 3.050275 GCACTTGGCCGACCTGAC 61.050 66.667 0.00 0.00 36.63 3.51
531 532 1.484038 TGCCTGAAAAACAAGGCACT 58.516 45.000 12.20 0.00 42.86 4.40
532 533 2.137523 CATGCCTGAAAAACAAGGCAC 58.862 47.619 17.99 0.00 46.68 5.01
534 535 2.531522 ACATGCCTGAAAAACAAGGC 57.468 45.000 6.75 6.75 40.55 4.35
535 536 3.556775 CACAACATGCCTGAAAAACAAGG 59.443 43.478 0.00 0.00 0.00 3.61
536 537 4.431809 TCACAACATGCCTGAAAAACAAG 58.568 39.130 0.00 0.00 0.00 3.16
539 540 7.656707 AATTATCACAACATGCCTGAAAAAC 57.343 32.000 0.00 0.00 0.00 2.43
541 542 8.674263 AAAAATTATCACAACATGCCTGAAAA 57.326 26.923 0.00 0.00 0.00 2.29
544 545 7.178274 AGGTAAAAATTATCACAACATGCCTGA 59.822 33.333 0.00 0.00 0.00 3.86
545 546 7.276218 CAGGTAAAAATTATCACAACATGCCTG 59.724 37.037 0.00 0.00 0.00 4.85
546 547 7.178274 TCAGGTAAAAATTATCACAACATGCCT 59.822 33.333 0.00 0.00 0.00 4.75
547 548 7.319646 TCAGGTAAAAATTATCACAACATGCC 58.680 34.615 0.00 0.00 0.00 4.40
548 549 8.931385 ATCAGGTAAAAATTATCACAACATGC 57.069 30.769 0.00 0.00 0.00 4.06
564 565 8.006298 ACATGTTGAACAGAAAATCAGGTAAA 57.994 30.769 3.74 0.00 0.00 2.01
577 578 8.520258 CACGTAAAACTTTTACATGTTGAACAG 58.480 33.333 19.71 0.00 0.00 3.16
579 580 7.485595 ACCACGTAAAACTTTTACATGTTGAAC 59.514 33.333 19.71 0.00 0.00 3.18
580 581 7.536855 ACCACGTAAAACTTTTACATGTTGAA 58.463 30.769 19.71 0.00 0.00 2.69
582 583 8.838452 TTACCACGTAAAACTTTTACATGTTG 57.162 30.769 19.71 12.18 0.00 3.33
642 647 1.499368 TCAGCATACTGGGCAGATGA 58.501 50.000 0.00 0.00 44.59 2.92
841 856 5.694674 ATAAATATTGCCAAACGCGTTTG 57.305 34.783 42.94 42.94 46.93 2.93
844 859 6.529696 CAAAAATAAATATTGCCAAACGCGT 58.470 32.000 5.58 5.58 42.08 6.01
911 928 3.713288 TGAGTAAACTAATGGCGGATCG 58.287 45.455 0.00 0.00 0.00 3.69
966 983 2.863153 CAGCTGCACGGTAACTGC 59.137 61.111 0.00 4.66 39.98 4.40
985 1002 1.598701 GCCATTGGCTTGGTGGAGTC 61.599 60.000 20.66 0.00 46.69 3.36
1134 1710 4.065281 GTACCACGCTCCGGCAGT 62.065 66.667 0.00 0.00 38.60 4.40
1221 1800 2.672651 TACGTGAACGCCGGGAGA 60.673 61.111 2.18 0.00 44.43 3.71
1485 2102 2.287373 AGCAGTACGTACTATGCTCGTC 59.713 50.000 27.55 12.81 38.69 4.20
1486 2103 2.286872 AGCAGTACGTACTATGCTCGT 58.713 47.619 27.55 13.16 40.78 4.18
1488 2105 5.575957 TGTAAAGCAGTACGTACTATGCTC 58.424 41.667 30.92 22.52 35.35 4.26
1489 2106 5.450137 CCTGTAAAGCAGTACGTACTATGCT 60.450 44.000 27.55 27.55 43.55 3.79
1490 2107 4.738740 CCTGTAAAGCAGTACGTACTATGC 59.261 45.833 26.95 25.67 43.55 3.14
1492 2109 6.151648 TGAACCTGTAAAGCAGTACGTACTAT 59.848 38.462 26.95 16.18 43.55 2.12
1493 2110 5.473162 TGAACCTGTAAAGCAGTACGTACTA 59.527 40.000 26.95 9.44 43.55 1.82
1494 2111 4.279169 TGAACCTGTAAAGCAGTACGTACT 59.721 41.667 22.45 22.45 43.55 2.73
1495 2112 4.383948 GTGAACCTGTAAAGCAGTACGTAC 59.616 45.833 18.10 18.10 43.55 3.67
1510 2154 3.668447 ACAGCTATTCAGTGTGAACCTG 58.332 45.455 10.11 10.11 39.45 4.00
1517 2161 1.618837 ACCGTGACAGCTATTCAGTGT 59.381 47.619 0.00 0.00 0.00 3.55
1532 2176 2.060326 ATGTTACACTCGTCACCGTG 57.940 50.000 0.00 0.00 37.18 4.94
1533 2177 2.223876 ACAATGTTACACTCGTCACCGT 60.224 45.455 0.00 0.00 35.01 4.83
1534 2178 2.400399 ACAATGTTACACTCGTCACCG 58.600 47.619 0.00 0.00 0.00 4.94
1535 2179 3.606153 GCAACAATGTTACACTCGTCACC 60.606 47.826 0.00 0.00 0.00 4.02
1608 2253 0.532573 TCTTCTGCCCAGTCGCTTAG 59.467 55.000 0.00 0.00 0.00 2.18
1609 2254 0.973632 TTCTTCTGCCCAGTCGCTTA 59.026 50.000 0.00 0.00 0.00 3.09
1610 2255 0.321122 CTTCTTCTGCCCAGTCGCTT 60.321 55.000 0.00 0.00 0.00 4.68
1611 2256 1.294780 CTTCTTCTGCCCAGTCGCT 59.705 57.895 0.00 0.00 0.00 4.93
1612 2257 1.743252 CCTTCTTCTGCCCAGTCGC 60.743 63.158 0.00 0.00 0.00 5.19
1613 2258 1.743252 GCCTTCTTCTGCCCAGTCG 60.743 63.158 0.00 0.00 0.00 4.18
1614 2259 0.676151 CTGCCTTCTTCTGCCCAGTC 60.676 60.000 0.00 0.00 0.00 3.51
1615 2260 1.377994 CTGCCTTCTTCTGCCCAGT 59.622 57.895 0.00 0.00 0.00 4.00
1616 2261 1.378250 CCTGCCTTCTTCTGCCCAG 60.378 63.158 0.00 0.00 0.00 4.45
1617 2262 1.426251 TTCCTGCCTTCTTCTGCCCA 61.426 55.000 0.00 0.00 0.00 5.36
1618 2263 0.033699 ATTCCTGCCTTCTTCTGCCC 60.034 55.000 0.00 0.00 0.00 5.36
1619 2264 1.101331 CATTCCTGCCTTCTTCTGCC 58.899 55.000 0.00 0.00 0.00 4.85
1620 2265 1.831580 ACATTCCTGCCTTCTTCTGC 58.168 50.000 0.00 0.00 0.00 4.26
1621 2266 7.500227 TCATTTATACATTCCTGCCTTCTTCTG 59.500 37.037 0.00 0.00 0.00 3.02
1622 2267 7.577303 TCATTTATACATTCCTGCCTTCTTCT 58.423 34.615 0.00 0.00 0.00 2.85
1623 2268 7.807977 TCATTTATACATTCCTGCCTTCTTC 57.192 36.000 0.00 0.00 0.00 2.87
1624 2269 8.773033 AATCATTTATACATTCCTGCCTTCTT 57.227 30.769 0.00 0.00 0.00 2.52
1625 2270 8.773033 AAATCATTTATACATTCCTGCCTTCT 57.227 30.769 0.00 0.00 0.00 2.85
1628 2273 9.812347 TGATAAATCATTTATACATTCCTGCCT 57.188 29.630 2.42 0.00 36.04 4.75
1651 2296 8.740906 TCTCGACTAAGACTTAACAAGATTGAT 58.259 33.333 0.00 0.00 0.00 2.57
1652 2297 8.021973 GTCTCGACTAAGACTTAACAAGATTGA 58.978 37.037 0.00 0.00 42.01 2.57
1653 2298 8.164058 GTCTCGACTAAGACTTAACAAGATTG 57.836 38.462 0.00 0.00 42.01 2.67
1674 2319 1.997669 AAGCATCGACCGAAAGTCTC 58.002 50.000 0.00 0.00 43.91 3.36
1675 2320 2.457366 AAAGCATCGACCGAAAGTCT 57.543 45.000 0.00 0.00 43.91 3.24
1676 2321 3.537793 AAAAAGCATCGACCGAAAGTC 57.462 42.857 0.00 0.00 42.54 3.01
1802 2449 2.750350 GGAGTGGTGTGGAGGGTG 59.250 66.667 0.00 0.00 0.00 4.61
1896 2543 2.711146 GGGATACGGTGGACCTGATCC 61.711 61.905 13.77 13.77 43.65 3.36
1946 2593 4.103103 GCAAAGGAACGCGAGGGC 62.103 66.667 15.93 2.23 0.00 5.19
2117 2764 2.904866 GCGGCAAGTGTGGTTCCA 60.905 61.111 0.00 0.00 0.00 3.53
2224 2871 1.272928 ACATCAGACAGGAGAGCCAGA 60.273 52.381 0.00 0.00 36.29 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.