Multiple sequence alignment - TraesCS7A01G341700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G341700 chr7A 100.000 3508 0 0 1 3508 501594619 501591112 0.000000e+00 6479
1 TraesCS7A01G341700 chr7A 97.148 526 13 2 2984 3508 635097548 635098072 0.000000e+00 887
2 TraesCS7A01G341700 chr7A 88.827 179 18 2 390 567 103136134 103136311 5.900000e-53 219
3 TraesCS7A01G341700 chr7D 85.264 2409 201 61 667 2988 431333253 431335594 0.000000e+00 2340
4 TraesCS7A01G341700 chr7D 84.804 204 29 2 389 591 27554195 27553993 1.650000e-48 204
5 TraesCS7A01G341700 chr7B 87.717 1840 144 34 1129 2927 448733235 448735033 0.000000e+00 2071
6 TraesCS7A01G341700 chr7B 78.632 468 51 20 667 1110 448730629 448731071 7.470000e-67 265
7 TraesCS7A01G341700 chr4B 97.719 526 11 1 2983 3508 39111350 39110826 0.000000e+00 904
8 TraesCS7A01G341700 chr2A 97.529 526 12 1 2983 3508 736032316 736031792 0.000000e+00 898
9 TraesCS7A01G341700 chr2A 87.574 169 20 1 401 569 594991223 594991390 9.940000e-46 195
10 TraesCS7A01G341700 chr2B 97.333 525 13 1 2984 3508 587098 587621 0.000000e+00 891
11 TraesCS7A01G341700 chr2B 97.154 527 13 2 2983 3508 622658306 622658831 0.000000e+00 889
12 TraesCS7A01G341700 chr1B 97.159 528 12 3 2982 3508 640490398 640489873 0.000000e+00 889
13 TraesCS7A01G341700 chr1B 97.148 526 12 3 2984 3508 640491330 640490807 0.000000e+00 885
14 TraesCS7A01G341700 chr1B 87.293 181 21 2 389 569 593670182 593670004 4.590000e-49 206
15 TraesCS7A01G341700 chr1B 87.135 171 22 0 401 571 667350657 667350827 9.940000e-46 195
16 TraesCS7A01G341700 chr5B 97.154 527 12 3 2983 3508 655133718 655134242 0.000000e+00 887
17 TraesCS7A01G341700 chr4A 96.780 528 13 4 2983 3508 721823536 721824061 0.000000e+00 878
18 TraesCS7A01G341700 chr5D 87.845 181 22 0 401 581 486564606 486564786 2.740000e-51 213
19 TraesCS7A01G341700 chr5A 88.701 177 17 3 394 569 336841441 336841615 2.740000e-51 213
20 TraesCS7A01G341700 chr5A 87.283 173 21 1 390 561 546412167 546411995 2.760000e-46 196
21 TraesCS7A01G341700 chr1D 88.953 172 18 1 398 569 365984080 365984250 9.870000e-51 211


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G341700 chr7A 501591112 501594619 3507 True 6479 6479 100.0000 1 3508 1 chr7A.!!$R1 3507
1 TraesCS7A01G341700 chr7A 635097548 635098072 524 False 887 887 97.1480 2984 3508 1 chr7A.!!$F2 524
2 TraesCS7A01G341700 chr7D 431333253 431335594 2341 False 2340 2340 85.2640 667 2988 1 chr7D.!!$F1 2321
3 TraesCS7A01G341700 chr7B 448730629 448735033 4404 False 1168 2071 83.1745 667 2927 2 chr7B.!!$F1 2260
4 TraesCS7A01G341700 chr4B 39110826 39111350 524 True 904 904 97.7190 2983 3508 1 chr4B.!!$R1 525
5 TraesCS7A01G341700 chr2A 736031792 736032316 524 True 898 898 97.5290 2983 3508 1 chr2A.!!$R1 525
6 TraesCS7A01G341700 chr2B 587098 587621 523 False 891 891 97.3330 2984 3508 1 chr2B.!!$F1 524
7 TraesCS7A01G341700 chr2B 622658306 622658831 525 False 889 889 97.1540 2983 3508 1 chr2B.!!$F2 525
8 TraesCS7A01G341700 chr1B 640489873 640491330 1457 True 887 889 97.1535 2982 3508 2 chr1B.!!$R2 526
9 TraesCS7A01G341700 chr5B 655133718 655134242 524 False 887 887 97.1540 2983 3508 1 chr5B.!!$F1 525
10 TraesCS7A01G341700 chr4A 721823536 721824061 525 False 878 878 96.7800 2983 3508 1 chr4A.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
342 343 0.034756 TTGTCACGGCTGCTGTACAT 59.965 50.0 14.72 0.00 0.00 2.29 F
636 637 0.165944 GATTTCAACCACGTGAGCGG 59.834 55.0 19.30 1.83 43.45 5.52 F
1181 3364 0.244994 CTAGGATTATCAGCCGCGCT 59.755 55.0 5.56 0.00 40.77 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2311 4527 0.039527 GCTTTTCACCGACGGCATTT 60.040 50.000 15.39 0.0 0.00 2.32 R
2318 4534 1.333791 CCGTTCTTGCTTTTCACCGAC 60.334 52.381 0.00 0.0 0.00 4.79 R
2764 4993 0.734889 GGCGATAATGTTGCTGCAGT 59.265 50.000 16.64 0.0 37.39 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.389576 CGCTCGCGCTTTGGCTTT 62.390 61.111 5.56 0.00 36.09 3.51
27 28 2.802414 GCTCGCGCTTTGGCTTTG 60.802 61.111 5.56 0.00 36.09 2.77
28 29 2.802414 CTCGCGCTTTGGCTTTGC 60.802 61.111 5.56 0.00 36.09 3.68
38 39 3.733960 GGCTTTGCCGACGTTCCC 61.734 66.667 0.00 0.00 39.62 3.97
39 40 4.084888 GCTTTGCCGACGTTCCCG 62.085 66.667 0.00 0.00 40.83 5.14
49 50 3.726517 CGTTCCCGTGCCTTGCTG 61.727 66.667 0.00 0.00 0.00 4.41
50 51 3.365265 GTTCCCGTGCCTTGCTGG 61.365 66.667 0.00 0.00 39.35 4.85
51 52 3.884774 TTCCCGTGCCTTGCTGGT 61.885 61.111 0.00 0.00 38.35 4.00
52 53 4.641645 TCCCGTGCCTTGCTGGTG 62.642 66.667 0.00 0.00 38.35 4.17
59 60 4.711949 CCTTGCTGGTGCTCGCCT 62.712 66.667 0.86 0.00 40.48 5.52
60 61 3.123620 CTTGCTGGTGCTCGCCTC 61.124 66.667 0.86 0.00 40.48 4.70
73 74 4.537433 GCCTCGGCGCCTTCATCT 62.537 66.667 26.68 0.00 0.00 2.90
74 75 2.279784 CCTCGGCGCCTTCATCTC 60.280 66.667 26.68 0.00 0.00 2.75
75 76 2.656651 CTCGGCGCCTTCATCTCG 60.657 66.667 26.68 8.62 0.00 4.04
76 77 4.207281 TCGGCGCCTTCATCTCGG 62.207 66.667 26.68 5.22 0.00 4.63
77 78 4.514577 CGGCGCCTTCATCTCGGT 62.515 66.667 26.68 0.00 0.00 4.69
79 80 2.496817 GCGCCTTCATCTCGGTCT 59.503 61.111 0.00 0.00 0.00 3.85
83 84 1.646189 GCCTTCATCTCGGTCTTGAC 58.354 55.000 0.00 0.00 0.00 3.18
84 85 1.914634 CCTTCATCTCGGTCTTGACG 58.085 55.000 0.00 0.00 0.00 4.35
85 86 1.272781 CTTCATCTCGGTCTTGACGC 58.727 55.000 0.00 0.00 0.00 5.19
86 87 0.888619 TTCATCTCGGTCTTGACGCT 59.111 50.000 0.00 0.00 0.00 5.07
89 90 0.179161 ATCTCGGTCTTGACGCTTCG 60.179 55.000 0.00 0.00 0.00 3.79
91 92 3.479269 CGGTCTTGACGCTTCGCC 61.479 66.667 0.00 0.00 0.00 5.54
93 94 2.357034 GTCTTGACGCTTCGCCCA 60.357 61.111 0.00 0.00 0.00 5.36
97 98 0.240945 CTTGACGCTTCGCCCAAAAT 59.759 50.000 0.00 0.00 0.00 1.82
99 100 0.039617 TGACGCTTCGCCCAAAATTG 60.040 50.000 0.00 0.00 0.00 2.32
101 102 0.887933 ACGCTTCGCCCAAAATTGAT 59.112 45.000 0.00 0.00 0.00 2.57
103 104 2.288763 ACGCTTCGCCCAAAATTGATTT 60.289 40.909 0.00 0.00 0.00 2.17
104 105 3.057174 ACGCTTCGCCCAAAATTGATTTA 60.057 39.130 0.00 0.00 0.00 1.40
106 107 4.201580 CGCTTCGCCCAAAATTGATTTAAC 60.202 41.667 0.00 0.00 0.00 2.01
107 108 4.688413 GCTTCGCCCAAAATTGATTTAACA 59.312 37.500 0.00 0.00 0.00 2.41
108 109 5.389411 GCTTCGCCCAAAATTGATTTAACAC 60.389 40.000 0.00 0.00 0.00 3.32
109 110 5.201713 TCGCCCAAAATTGATTTAACACA 57.798 34.783 0.00 0.00 0.00 3.72
110 111 5.601662 TCGCCCAAAATTGATTTAACACAA 58.398 33.333 0.00 0.00 0.00 3.33
111 112 6.049149 TCGCCCAAAATTGATTTAACACAAA 58.951 32.000 0.00 0.00 0.00 2.83
112 113 6.708054 TCGCCCAAAATTGATTTAACACAAAT 59.292 30.769 0.00 0.00 0.00 2.32
113 114 7.227512 TCGCCCAAAATTGATTTAACACAAATT 59.772 29.630 0.00 0.00 0.00 1.82
115 116 7.533561 GCCCAAAATTGATTTAACACAAATTCG 59.466 33.333 0.00 0.00 0.00 3.34
124 125 8.756864 TGATTTAACACAAATTCGTTTTTAGGC 58.243 29.630 0.00 0.00 0.00 3.93
125 126 8.649973 ATTTAACACAAATTCGTTTTTAGGCA 57.350 26.923 0.00 0.00 0.00 4.75
126 127 8.475331 TTTAACACAAATTCGTTTTTAGGCAA 57.525 26.923 0.00 0.00 0.00 4.52
127 128 5.959652 ACACAAATTCGTTTTTAGGCAAC 57.040 34.783 0.00 0.00 0.00 4.17
145 146 6.108097 GGCAACTTACAAATAGCTACTCAC 57.892 41.667 0.00 0.00 0.00 3.51
146 147 5.875359 GGCAACTTACAAATAGCTACTCACT 59.125 40.000 0.00 0.00 0.00 3.41
147 148 6.183360 GGCAACTTACAAATAGCTACTCACTG 60.183 42.308 0.00 0.00 0.00 3.66
148 149 6.183360 GCAACTTACAAATAGCTACTCACTGG 60.183 42.308 0.00 0.00 0.00 4.00
149 150 6.607004 ACTTACAAATAGCTACTCACTGGT 57.393 37.500 0.00 0.00 0.00 4.00
154 155 9.953565 TTACAAATAGCTACTCACTGGTTTTAT 57.046 29.630 0.00 0.00 0.00 1.40
155 156 8.863872 ACAAATAGCTACTCACTGGTTTTATT 57.136 30.769 0.00 0.00 0.00 1.40
156 157 9.953565 ACAAATAGCTACTCACTGGTTTTATTA 57.046 29.630 0.00 0.00 0.00 0.98
159 160 9.601217 AATAGCTACTCACTGGTTTTATTACTG 57.399 33.333 0.00 0.00 0.00 2.74
160 161 7.005709 AGCTACTCACTGGTTTTATTACTGT 57.994 36.000 0.00 0.00 0.00 3.55
161 162 8.130671 AGCTACTCACTGGTTTTATTACTGTA 57.869 34.615 0.00 0.00 0.00 2.74
162 163 8.033626 AGCTACTCACTGGTTTTATTACTGTAC 58.966 37.037 0.00 0.00 0.00 2.90
163 164 8.033626 GCTACTCACTGGTTTTATTACTGTACT 58.966 37.037 0.00 0.00 0.00 2.73
164 165 9.355215 CTACTCACTGGTTTTATTACTGTACTG 57.645 37.037 0.00 0.00 0.00 2.74
165 166 7.159372 ACTCACTGGTTTTATTACTGTACTGG 58.841 38.462 4.66 0.00 0.00 4.00
166 167 7.015877 ACTCACTGGTTTTATTACTGTACTGGA 59.984 37.037 4.66 0.00 0.00 3.86
167 168 7.737869 TCACTGGTTTTATTACTGTACTGGAA 58.262 34.615 0.00 0.00 0.00 3.53
169 170 9.010029 CACTGGTTTTATTACTGTACTGGAAAT 57.990 33.333 1.06 4.99 0.00 2.17
170 171 9.010029 ACTGGTTTTATTACTGTACTGGAAATG 57.990 33.333 1.06 0.00 0.00 2.32
171 172 9.226606 CTGGTTTTATTACTGTACTGGAAATGA 57.773 33.333 1.06 0.00 0.00 2.57
172 173 9.747898 TGGTTTTATTACTGTACTGGAAATGAT 57.252 29.630 1.06 0.00 0.00 2.45
176 177 5.435686 TTACTGTACTGGAAATGATGGCT 57.564 39.130 4.66 0.00 0.00 4.75
177 178 6.553953 TTACTGTACTGGAAATGATGGCTA 57.446 37.500 4.66 0.00 0.00 3.93
179 180 4.716784 ACTGTACTGGAAATGATGGCTAGA 59.283 41.667 4.66 0.00 0.00 2.43
181 182 6.061022 TGTACTGGAAATGATGGCTAGAAA 57.939 37.500 0.00 0.00 0.00 2.52
182 183 6.662755 TGTACTGGAAATGATGGCTAGAAAT 58.337 36.000 0.00 0.00 0.00 2.17
184 185 7.933577 TGTACTGGAAATGATGGCTAGAAATAG 59.066 37.037 0.00 0.00 0.00 1.73
185 186 5.767168 ACTGGAAATGATGGCTAGAAATAGC 59.233 40.000 0.00 0.00 42.12 2.97
186 187 5.945310 TGGAAATGATGGCTAGAAATAGCT 58.055 37.500 7.17 0.00 42.45 3.32
189 190 7.663081 TGGAAATGATGGCTAGAAATAGCTTAG 59.337 37.037 7.17 0.00 42.45 2.18
190 191 7.361628 GGAAATGATGGCTAGAAATAGCTTAGC 60.362 40.741 5.90 5.90 42.45 3.09
193 194 3.771577 GGCTAGAAATAGCTTAGCCCA 57.228 47.619 18.88 0.00 45.51 5.36
194 195 4.086706 GGCTAGAAATAGCTTAGCCCAA 57.913 45.455 18.88 0.00 45.51 4.12
195 196 4.657013 GGCTAGAAATAGCTTAGCCCAAT 58.343 43.478 18.88 0.00 45.51 3.16
196 197 5.073428 GGCTAGAAATAGCTTAGCCCAATT 58.927 41.667 18.88 0.00 45.51 2.32
197 198 5.536538 GGCTAGAAATAGCTTAGCCCAATTT 59.463 40.000 18.88 5.27 45.51 1.82
199 200 6.263168 GCTAGAAATAGCTTAGCCCAATTTCA 59.737 38.462 25.21 16.28 39.84 2.69
200 201 7.201821 GCTAGAAATAGCTTAGCCCAATTTCAA 60.202 37.037 25.21 0.31 39.84 2.69
201 202 7.480760 AGAAATAGCTTAGCCCAATTTCAAA 57.519 32.000 25.21 0.00 36.27 2.69
202 203 7.906327 AGAAATAGCTTAGCCCAATTTCAAAA 58.094 30.769 25.21 0.00 36.27 2.44
203 204 8.374743 AGAAATAGCTTAGCCCAATTTCAAAAA 58.625 29.630 25.21 0.00 36.27 1.94
205 206 5.806654 AGCTTAGCCCAATTTCAAAAAGA 57.193 34.783 0.00 0.00 0.00 2.52
206 207 5.787380 AGCTTAGCCCAATTTCAAAAAGAG 58.213 37.500 0.00 0.00 0.00 2.85
207 208 4.931601 GCTTAGCCCAATTTCAAAAAGAGG 59.068 41.667 0.00 0.00 0.00 3.69
209 210 6.739331 TTAGCCCAATTTCAAAAAGAGGAA 57.261 33.333 0.00 0.00 0.00 3.36
210 211 5.628797 AGCCCAATTTCAAAAAGAGGAAA 57.371 34.783 0.00 0.00 37.41 3.13
211 212 5.614308 AGCCCAATTTCAAAAAGAGGAAAG 58.386 37.500 0.00 0.00 36.55 2.62
212 213 5.366477 AGCCCAATTTCAAAAAGAGGAAAGA 59.634 36.000 0.00 0.00 36.55 2.52
213 214 6.054941 GCCCAATTTCAAAAAGAGGAAAGAA 58.945 36.000 0.00 0.00 36.55 2.52
216 217 8.615211 CCCAATTTCAAAAAGAGGAAAGAAAAG 58.385 33.333 0.00 0.00 36.55 2.27
217 218 9.166173 CCAATTTCAAAAAGAGGAAAGAAAAGT 57.834 29.630 0.00 0.00 36.55 2.66
225 226 8.941995 AAAAGAGGAAAGAAAAGTAATAGGCT 57.058 30.769 0.00 0.00 0.00 4.58
226 227 7.929941 AAGAGGAAAGAAAAGTAATAGGCTG 57.070 36.000 0.00 0.00 0.00 4.85
227 228 5.883115 AGAGGAAAGAAAAGTAATAGGCTGC 59.117 40.000 0.00 0.00 0.00 5.25
228 229 4.950475 AGGAAAGAAAAGTAATAGGCTGCC 59.050 41.667 11.65 11.65 0.00 4.85
229 230 4.098044 GGAAAGAAAAGTAATAGGCTGCCC 59.902 45.833 16.57 0.00 0.00 5.36
230 231 4.316025 AAGAAAAGTAATAGGCTGCCCA 57.684 40.909 16.57 0.67 0.00 5.36
232 233 4.672899 AGAAAAGTAATAGGCTGCCCAAA 58.327 39.130 16.57 1.15 0.00 3.28
233 234 4.462834 AGAAAAGTAATAGGCTGCCCAAAC 59.537 41.667 16.57 8.92 0.00 2.93
234 235 3.449746 AAGTAATAGGCTGCCCAAACA 57.550 42.857 16.57 0.00 0.00 2.83
235 236 3.004752 AGTAATAGGCTGCCCAAACAG 57.995 47.619 16.57 0.00 40.80 3.16
236 237 2.024414 GTAATAGGCTGCCCAAACAGG 58.976 52.381 16.57 0.00 38.16 4.00
237 238 0.704076 AATAGGCTGCCCAAACAGGA 59.296 50.000 16.57 0.00 41.22 3.86
238 239 0.929244 ATAGGCTGCCCAAACAGGAT 59.071 50.000 16.57 0.00 41.22 3.24
239 240 1.590591 TAGGCTGCCCAAACAGGATA 58.409 50.000 16.57 0.00 41.22 2.59
240 241 0.704076 AGGCTGCCCAAACAGGATAA 59.296 50.000 16.57 0.00 41.22 1.75
241 242 0.817654 GGCTGCCCAAACAGGATAAC 59.182 55.000 7.66 0.00 41.22 1.89
242 243 1.616994 GGCTGCCCAAACAGGATAACT 60.617 52.381 7.66 0.00 41.22 2.24
243 244 2.356741 GGCTGCCCAAACAGGATAACTA 60.357 50.000 7.66 0.00 41.22 2.24
244 245 2.945668 GCTGCCCAAACAGGATAACTAG 59.054 50.000 0.00 0.00 41.22 2.57
245 246 2.945668 CTGCCCAAACAGGATAACTAGC 59.054 50.000 0.00 0.00 41.22 3.42
246 247 2.298610 GCCCAAACAGGATAACTAGCC 58.701 52.381 0.00 0.00 41.22 3.93
248 249 2.241176 CCCAAACAGGATAACTAGCCCA 59.759 50.000 0.00 0.00 41.22 5.36
250 251 4.536765 CCAAACAGGATAACTAGCCCAAT 58.463 43.478 0.00 0.00 41.22 3.16
252 253 5.422012 CCAAACAGGATAACTAGCCCAATTT 59.578 40.000 0.00 0.00 41.22 1.82
253 254 6.405842 CCAAACAGGATAACTAGCCCAATTTC 60.406 42.308 0.00 0.00 41.22 2.17
254 255 5.450818 ACAGGATAACTAGCCCAATTTCA 57.549 39.130 0.00 0.00 30.36 2.69
255 256 5.826643 ACAGGATAACTAGCCCAATTTCAA 58.173 37.500 0.00 0.00 30.36 2.69
256 257 6.252995 ACAGGATAACTAGCCCAATTTCAAA 58.747 36.000 0.00 0.00 30.36 2.69
258 259 7.234577 ACAGGATAACTAGCCCAATTTCAAAAA 59.765 33.333 0.00 0.00 30.36 1.94
260 261 7.673926 AGGATAACTAGCCCAATTTCAAAAAGA 59.326 33.333 0.00 0.00 30.36 2.52
262 263 9.358872 GATAACTAGCCCAATTTCAAAAAGAAG 57.641 33.333 0.00 0.00 37.57 2.85
263 264 6.976934 ACTAGCCCAATTTCAAAAAGAAGA 57.023 33.333 0.00 0.00 37.57 2.87
264 265 7.360113 ACTAGCCCAATTTCAAAAAGAAGAA 57.640 32.000 0.00 0.00 37.57 2.52
266 267 7.928167 ACTAGCCCAATTTCAAAAAGAAGAAAG 59.072 33.333 0.00 0.00 37.19 2.62
267 268 6.888105 AGCCCAATTTCAAAAAGAAGAAAGA 58.112 32.000 0.00 0.00 37.19 2.52
268 269 7.337938 AGCCCAATTTCAAAAAGAAGAAAGAA 58.662 30.769 0.00 0.00 37.19 2.52
270 271 8.458052 GCCCAATTTCAAAAAGAAGAAAGAAAA 58.542 29.630 0.00 0.00 37.19 2.29
271 272 9.992910 CCCAATTTCAAAAAGAAGAAAGAAAAG 57.007 29.630 0.00 0.00 37.19 2.27
281 282 9.755804 AAAAGAAGAAAGAAAAGAAATAGGCTG 57.244 29.630 0.00 0.00 0.00 4.85
282 283 6.918626 AGAAGAAAGAAAAGAAATAGGCTGC 58.081 36.000 0.00 0.00 0.00 5.25
284 285 4.464244 AGAAAGAAAAGAAATAGGCTGCCC 59.536 41.667 16.57 0.00 0.00 5.36
285 286 3.456380 AGAAAAGAAATAGGCTGCCCA 57.544 42.857 16.57 0.67 0.00 5.36
286 287 3.092301 AGAAAAGAAATAGGCTGCCCAC 58.908 45.455 16.57 2.63 0.00 4.61
289 290 0.698238 AGAAATAGGCTGCCCACACA 59.302 50.000 16.57 0.00 0.00 3.72
290 291 1.098050 GAAATAGGCTGCCCACACAG 58.902 55.000 16.57 0.00 40.80 3.66
292 293 0.698238 AATAGGCTGCCCACACAGAA 59.302 50.000 16.57 0.00 40.25 3.02
294 295 1.578897 TAGGCTGCCCACACAGAATA 58.421 50.000 16.57 0.00 40.25 1.75
295 296 0.698238 AGGCTGCCCACACAGAATAA 59.302 50.000 16.57 0.00 40.25 1.40
296 297 0.811281 GGCTGCCCACACAGAATAAC 59.189 55.000 7.66 0.00 40.25 1.89
298 299 1.740025 GCTGCCCACACAGAATAACTC 59.260 52.381 0.00 0.00 40.25 3.01
299 300 2.616510 GCTGCCCACACAGAATAACTCT 60.617 50.000 0.00 0.00 40.25 3.24
300 301 3.369471 GCTGCCCACACAGAATAACTCTA 60.369 47.826 0.00 0.00 40.25 2.43
301 302 4.184629 CTGCCCACACAGAATAACTCTAC 58.815 47.826 0.00 0.00 40.25 2.59
302 303 3.187700 GCCCACACAGAATAACTCTACG 58.812 50.000 0.00 0.00 31.12 3.51
303 304 3.368116 GCCCACACAGAATAACTCTACGT 60.368 47.826 0.00 0.00 31.12 3.57
305 306 4.321750 CCCACACAGAATAACTCTACGTGT 60.322 45.833 0.00 0.00 40.28 4.49
306 307 5.227908 CCACACAGAATAACTCTACGTGTT 58.772 41.667 0.00 0.00 38.57 3.32
307 308 5.694910 CCACACAGAATAACTCTACGTGTTT 59.305 40.000 0.00 0.00 38.57 2.83
308 309 6.346598 CCACACAGAATAACTCTACGTGTTTG 60.347 42.308 0.00 0.00 38.57 2.93
310 311 6.200286 ACACAGAATAACTCTACGTGTTTGTG 59.800 38.462 13.77 13.77 37.81 3.33
312 313 6.982141 ACAGAATAACTCTACGTGTTTGTGAA 59.018 34.615 0.00 0.00 31.12 3.18
313 314 7.169308 ACAGAATAACTCTACGTGTTTGTGAAG 59.831 37.037 0.00 0.00 31.12 3.02
316 317 4.380841 ACTCTACGTGTTTGTGAAGACA 57.619 40.909 0.00 0.00 0.00 3.41
317 318 4.751060 ACTCTACGTGTTTGTGAAGACAA 58.249 39.130 0.00 0.00 40.45 3.18
335 336 3.574614 ACAAATTTATTGTCACGGCTGC 58.425 40.909 0.00 0.00 0.00 5.25
336 337 3.255642 ACAAATTTATTGTCACGGCTGCT 59.744 39.130 0.00 0.00 0.00 4.24
337 338 3.492421 AATTTATTGTCACGGCTGCTG 57.508 42.857 6.98 6.98 0.00 4.41
338 339 1.890876 TTTATTGTCACGGCTGCTGT 58.109 45.000 8.62 8.62 0.00 4.40
340 341 2.004583 TATTGTCACGGCTGCTGTAC 57.995 50.000 14.72 12.82 0.00 2.90
342 343 0.034756 TTGTCACGGCTGCTGTACAT 59.965 50.000 14.72 0.00 0.00 2.29
343 344 0.670239 TGTCACGGCTGCTGTACATG 60.670 55.000 14.72 1.92 0.00 3.21
344 345 0.670546 GTCACGGCTGCTGTACATGT 60.671 55.000 14.72 2.69 0.00 3.21
345 346 0.034756 TCACGGCTGCTGTACATGTT 59.965 50.000 14.72 0.00 0.00 2.71
346 347 0.874390 CACGGCTGCTGTACATGTTT 59.126 50.000 14.72 0.00 0.00 2.83
347 348 1.135972 CACGGCTGCTGTACATGTTTC 60.136 52.381 14.72 0.00 0.00 2.78
348 349 1.270839 ACGGCTGCTGTACATGTTTCT 60.271 47.619 13.39 0.00 0.00 2.52
351 352 1.536766 GCTGCTGTACATGTTTCTGCA 59.463 47.619 22.88 22.88 35.47 4.41
352 353 2.030893 GCTGCTGTACATGTTTCTGCAA 60.031 45.455 23.72 14.36 36.11 4.08
353 354 3.558505 CTGCTGTACATGTTTCTGCAAC 58.441 45.455 23.72 10.00 36.11 4.17
375 376 4.054780 AGAAACAAGTTCTGCTACGTGA 57.945 40.909 0.00 0.00 45.29 4.35
376 377 4.632153 AGAAACAAGTTCTGCTACGTGAT 58.368 39.130 0.00 0.00 45.29 3.06
377 378 5.057149 AGAAACAAGTTCTGCTACGTGATT 58.943 37.500 0.00 2.63 45.29 2.57
378 379 4.732285 AACAAGTTCTGCTACGTGATTG 57.268 40.909 0.00 0.00 32.78 2.67
379 380 3.728845 ACAAGTTCTGCTACGTGATTGT 58.271 40.909 0.00 0.00 32.78 2.71
380 381 4.878439 ACAAGTTCTGCTACGTGATTGTA 58.122 39.130 0.00 0.00 32.78 2.41
381 382 4.923871 ACAAGTTCTGCTACGTGATTGTAG 59.076 41.667 0.00 0.00 43.76 2.74
383 384 5.892160 AGTTCTGCTACGTGATTGTAGTA 57.108 39.130 0.00 0.00 43.03 1.82
389 390 6.203808 TGCTACGTGATTGTAGTAGATTGT 57.796 37.500 0.00 0.00 43.03 2.71
390 391 7.324354 TGCTACGTGATTGTAGTAGATTGTA 57.676 36.000 0.00 0.00 43.03 2.41
391 392 7.191551 TGCTACGTGATTGTAGTAGATTGTAC 58.808 38.462 0.00 0.00 43.03 2.90
392 393 7.066645 TGCTACGTGATTGTAGTAGATTGTACT 59.933 37.037 0.00 0.00 43.03 2.73
393 394 7.587028 GCTACGTGATTGTAGTAGATTGTACTC 59.413 40.741 0.00 0.00 43.03 2.59
394 395 7.627298 ACGTGATTGTAGTAGATTGTACTCT 57.373 36.000 0.00 0.00 0.00 3.24
395 396 7.695820 ACGTGATTGTAGTAGATTGTACTCTC 58.304 38.462 0.00 0.00 0.00 3.20
396 397 7.553402 ACGTGATTGTAGTAGATTGTACTCTCT 59.447 37.037 0.00 0.00 0.00 3.10
397 398 8.399425 CGTGATTGTAGTAGATTGTACTCTCTT 58.601 37.037 0.00 0.00 0.00 2.85
415 416 8.603242 ACTCTCTTTCTTTTATTTACTTCGCA 57.397 30.769 0.00 0.00 0.00 5.10
429 430 7.801716 TTTACTTCGCATATTAGATTTGGCT 57.198 32.000 0.00 0.00 0.00 4.75
430 431 5.679734 ACTTCGCATATTAGATTTGGCTG 57.320 39.130 0.00 0.00 0.00 4.85
431 432 5.368145 ACTTCGCATATTAGATTTGGCTGA 58.632 37.500 0.00 0.00 0.00 4.26
433 434 5.929697 TCGCATATTAGATTTGGCTGAAG 57.070 39.130 0.00 0.00 0.00 3.02
434 435 5.368145 TCGCATATTAGATTTGGCTGAAGT 58.632 37.500 0.00 0.00 0.00 3.01
435 436 5.466728 TCGCATATTAGATTTGGCTGAAGTC 59.533 40.000 0.00 0.00 0.00 3.01
437 438 6.238456 CGCATATTAGATTTGGCTGAAGTCAA 60.238 38.462 0.00 0.00 37.94 3.18
610 611 8.325282 TCTAAGTACGCAAATGTATTTTGATCG 58.675 33.333 2.42 0.58 46.36 3.69
611 612 6.417191 AGTACGCAAATGTATTTTGATCGT 57.583 33.333 2.42 5.83 46.36 3.73
612 613 6.837992 AGTACGCAAATGTATTTTGATCGTT 58.162 32.000 8.32 0.00 46.36 3.85
613 614 5.990745 ACGCAAATGTATTTTGATCGTTG 57.009 34.783 2.42 0.00 46.36 4.10
614 615 4.856487 ACGCAAATGTATTTTGATCGTTGG 59.144 37.500 2.42 0.00 46.36 3.77
615 616 5.092105 CGCAAATGTATTTTGATCGTTGGA 58.908 37.500 2.42 0.00 46.36 3.53
616 617 5.003402 CGCAAATGTATTTTGATCGTTGGAC 59.997 40.000 2.42 0.00 46.36 4.02
617 618 5.003402 GCAAATGTATTTTGATCGTTGGACG 59.997 40.000 2.42 0.00 46.36 4.79
618 619 6.310960 CAAATGTATTTTGATCGTTGGACGA 58.689 36.000 5.59 5.59 46.52 4.20
627 628 2.242047 TCGTTGGACGATTTCAACCA 57.758 45.000 0.00 0.00 46.73 3.67
628 629 1.868498 TCGTTGGACGATTTCAACCAC 59.132 47.619 0.00 0.00 46.73 4.16
629 630 1.397945 CGTTGGACGATTTCAACCACG 60.398 52.381 0.00 0.00 46.05 4.94
630 631 1.600485 GTTGGACGATTTCAACCACGT 59.400 47.619 0.00 0.00 41.57 4.49
632 633 1.202545 TGGACGATTTCAACCACGTGA 60.203 47.619 19.30 0.00 39.04 4.35
633 634 1.459592 GGACGATTTCAACCACGTGAG 59.540 52.381 19.30 9.89 39.04 3.51
635 636 0.179250 CGATTTCAACCACGTGAGCG 60.179 55.000 19.30 6.52 44.93 5.03
636 637 0.165944 GATTTCAACCACGTGAGCGG 59.834 55.000 19.30 1.83 43.45 5.52
641 642 2.599578 ACCACGTGAGCGGTAGGT 60.600 61.111 19.30 0.00 46.47 3.08
642 643 2.126071 CCACGTGAGCGGTAGGTG 60.126 66.667 19.30 5.48 43.45 4.00
644 645 1.154016 CACGTGAGCGGTAGGTGAG 60.154 63.158 10.90 0.00 43.45 3.51
645 646 2.202623 CGTGAGCGGTAGGTGAGC 60.203 66.667 0.00 0.00 0.00 4.26
662 663 0.544223 AGCGAGGCTCTCTAGACAGA 59.456 55.000 13.50 0.00 30.62 3.41
663 664 1.142870 AGCGAGGCTCTCTAGACAGAT 59.857 52.381 13.50 0.00 30.62 2.90
664 665 1.266718 GCGAGGCTCTCTAGACAGATG 59.733 57.143 13.50 0.00 30.50 2.90
665 666 2.571212 CGAGGCTCTCTAGACAGATGT 58.429 52.381 13.50 0.00 30.50 3.06
701 705 2.107141 CCGCTCCGTTCCATCCTC 59.893 66.667 0.00 0.00 0.00 3.71
709 713 1.038130 CGTTCCATCCTCCCTCGTCT 61.038 60.000 0.00 0.00 0.00 4.18
715 719 1.957877 CATCCTCCCTCGTCTTCTACC 59.042 57.143 0.00 0.00 0.00 3.18
772 776 4.521062 GACCGGAGCTGCTCGCAT 62.521 66.667 22.25 10.38 42.61 4.73
786 790 4.527157 GCATCGCCGTTGCAGCTC 62.527 66.667 14.79 0.00 39.90 4.09
839 862 3.358076 CTCCCCAGGTTCGCTCGTC 62.358 68.421 0.00 0.00 0.00 4.20
856 880 4.659172 CCGCCCCCTGTTTCTGCA 62.659 66.667 0.00 0.00 0.00 4.41
869 893 3.329300 TCTGCAAGAAACCTCCAGC 57.671 52.632 0.00 0.00 42.31 4.85
870 894 0.250901 TCTGCAAGAAACCTCCAGCC 60.251 55.000 0.00 0.00 42.31 4.85
871 895 0.538057 CTGCAAGAAACCTCCAGCCA 60.538 55.000 0.00 0.00 34.07 4.75
873 897 0.813821 GCAAGAAACCTCCAGCCATC 59.186 55.000 0.00 0.00 0.00 3.51
874 898 1.467920 CAAGAAACCTCCAGCCATCC 58.532 55.000 0.00 0.00 0.00 3.51
913 950 1.079503 GACCTGTTCGTCAGAATGCC 58.920 55.000 10.79 0.00 46.27 4.40
922 959 3.570638 CAGAATGCCTCTGCCGCG 61.571 66.667 0.00 0.00 45.11 6.46
923 960 4.845580 AGAATGCCTCTGCCGCGG 62.846 66.667 24.05 24.05 36.33 6.46
958 995 0.386476 TGTACGCCGTTTGTCTGACT 59.614 50.000 9.51 0.00 0.00 3.41
960 997 0.386352 TACGCCGTTTGTCTGACTCG 60.386 55.000 9.51 10.62 0.00 4.18
971 1008 4.336889 TGTCTGACTCGAAACCTTTCAT 57.663 40.909 9.51 0.00 37.01 2.57
972 1009 4.058124 TGTCTGACTCGAAACCTTTCATG 58.942 43.478 9.51 0.00 37.01 3.07
1089 1126 0.539438 TGGCCCTTCGCTGTTCATTT 60.539 50.000 0.00 0.00 37.74 2.32
1091 1128 1.401905 GGCCCTTCGCTGTTCATTTAG 59.598 52.381 0.00 0.00 37.74 1.85
1094 1131 2.348666 CCCTTCGCTGTTCATTTAGTCG 59.651 50.000 0.00 0.00 0.00 4.18
1111 1148 1.880027 GTCGTTCATCCTGCCTTGTTT 59.120 47.619 0.00 0.00 0.00 2.83
1112 1149 3.071479 GTCGTTCATCCTGCCTTGTTTA 58.929 45.455 0.00 0.00 0.00 2.01
1125 1186 3.716601 CCTTGTTTAGGCACTTGTTTGG 58.283 45.455 0.00 0.00 41.75 3.28
1126 1187 2.880963 TGTTTAGGCACTTGTTTGGC 57.119 45.000 0.00 0.00 41.75 4.52
1149 3332 5.730568 GCCGTAGCATTAGAAATTGGAACTG 60.731 44.000 0.00 0.00 39.53 3.16
1163 3346 4.569180 ACTGCCAACTGCGCCACT 62.569 61.111 4.18 0.00 45.60 4.00
1173 3356 2.039418 ACTGCGCCACTAGGATTATCA 58.961 47.619 4.18 0.00 36.89 2.15
1176 3359 1.941668 GCGCCACTAGGATTATCAGCC 60.942 57.143 0.00 0.00 36.89 4.85
1181 3364 0.244994 CTAGGATTATCAGCCGCGCT 59.755 55.000 5.56 0.00 40.77 5.92
1190 3373 1.812922 CAGCCGCGCTCAATTCTCT 60.813 57.895 5.56 0.00 36.40 3.10
1214 3397 6.568869 TCATTCATTTTATTGTTTAGGGCGG 58.431 36.000 0.00 0.00 0.00 6.13
1215 3398 4.379339 TCATTTTATTGTTTAGGGCGGC 57.621 40.909 0.00 0.00 0.00 6.53
1216 3399 2.923605 TTTTATTGTTTAGGGCGGCG 57.076 45.000 0.51 0.51 0.00 6.46
1217 3400 0.452585 TTTATTGTTTAGGGCGGCGC 59.547 50.000 26.17 26.17 0.00 6.53
1245 3428 3.104843 TGCCACTGGTTAAAATGCAAC 57.895 42.857 0.00 0.00 0.00 4.17
1255 3438 4.621034 GGTTAAAATGCAACATTCGTCCAG 59.379 41.667 0.00 0.00 0.00 3.86
1259 3442 0.592637 TGCAACATTCGTCCAGCAAG 59.407 50.000 0.00 0.00 0.00 4.01
1284 3467 4.037858 GCTAGTGCTTCCATTTCATTGG 57.962 45.455 0.00 0.00 35.69 3.16
1320 3503 2.202623 CGGAGAGAAACGAGCCCG 60.203 66.667 0.00 0.00 42.50 6.13
1391 3574 4.775236 CAGAGGCTGGAGCTAAACTTATT 58.225 43.478 0.00 0.00 41.70 1.40
1421 3604 1.539827 CTTTGGCCTAAGTCCAAACGG 59.460 52.381 17.69 0.00 45.60 4.44
1436 3619 0.249322 AACGGTCTGTCCAACTGTCG 60.249 55.000 0.00 0.00 35.19 4.35
1567 3750 7.201530 CGACCTTCAACTTATTCAGGTACATTC 60.202 40.741 0.00 0.00 38.01 2.67
1571 3754 6.650120 TCAACTTATTCAGGTACATTCTCCC 58.350 40.000 0.00 0.00 0.00 4.30
1574 3757 5.131142 ACTTATTCAGGTACATTCTCCCTGG 59.869 44.000 5.18 0.00 44.78 4.45
1575 3758 2.642171 TCAGGTACATTCTCCCTGGT 57.358 50.000 5.18 0.00 44.78 4.00
1584 3767 1.064003 TTCTCCCTGGTTGCTGCTAA 58.936 50.000 0.00 0.00 0.00 3.09
1607 3790 6.923928 ATCTCTACTACTTGGTAGAACGAC 57.076 41.667 11.08 0.00 44.81 4.34
1608 3791 5.798132 TCTCTACTACTTGGTAGAACGACA 58.202 41.667 11.08 0.00 44.81 4.35
1612 3795 2.814280 ACTTGGTAGAACGACAGTGG 57.186 50.000 0.00 0.00 0.00 4.00
1619 3802 2.038387 AGAACGACAGTGGCTTGTTT 57.962 45.000 0.00 0.00 0.00 2.83
1647 3830 7.095017 GCTAGTCTTTACTGATCAGTTGCTTTT 60.095 37.037 32.14 16.69 42.54 2.27
1704 3887 1.891150 CCTGCTCTTGCCAAGAACAAT 59.109 47.619 11.37 0.00 37.02 2.71
1763 3946 6.663523 GGAAAACTTATCAATTCTCCTCCCAA 59.336 38.462 0.00 0.00 0.00 4.12
1775 3958 5.573380 TCTCCTCCCAATGAAGAATATGG 57.427 43.478 0.00 0.00 0.00 2.74
1797 3980 3.244181 GCATTGACTGGTTTTTGGTGGAT 60.244 43.478 0.00 0.00 0.00 3.41
1834 4017 6.318648 TGGAAGGTACATAATGTTGCTCATTC 59.681 38.462 10.06 0.00 44.50 2.67
1856 4039 6.536731 TCGGTTGTCGTACTCTCTAATATC 57.463 41.667 0.00 0.00 40.32 1.63
1886 4069 9.646336 GATGTTTGTTGTTGTACTAGTTAACAG 57.354 33.333 18.72 6.00 35.91 3.16
1914 4097 7.501225 GGAGACTAGTGAAGCTCTTATCTAACT 59.499 40.741 0.00 0.00 32.30 2.24
1916 4099 9.908747 AGACTAGTGAAGCTCTTATCTAACTTA 57.091 33.333 0.00 0.00 0.00 2.24
1927 4110 7.588488 GCTCTTATCTAACTTAGCAGTTACTCG 59.412 40.741 0.00 0.00 41.81 4.18
1933 4116 3.326747 ACTTAGCAGTTACTCGCCAAAG 58.673 45.455 12.84 12.84 0.00 2.77
1938 4121 4.770795 AGCAGTTACTCGCCAAAGAATAT 58.229 39.130 3.84 0.00 0.00 1.28
1971 4154 7.928908 TCTTTTACAATGATGTCTTTTGTGC 57.071 32.000 10.24 0.00 41.05 4.57
1982 4165 8.220755 TGATGTCTTTTGTGCTTTAGTAGTTT 57.779 30.769 0.00 0.00 0.00 2.66
1983 4166 8.128582 TGATGTCTTTTGTGCTTTAGTAGTTTG 58.871 33.333 0.00 0.00 0.00 2.93
1990 4173 5.849510 TGTGCTTTAGTAGTTTGAGTAGCA 58.150 37.500 0.00 0.00 35.26 3.49
2004 4187 5.249780 TGAGTAGCAGGGATTTGGTTTAA 57.750 39.130 0.00 0.00 0.00 1.52
2012 4195 5.069119 GCAGGGATTTGGTTTAAAGGATAGG 59.931 44.000 0.00 0.00 0.00 2.57
2017 4200 7.365563 GGGATTTGGTTTAAAGGATAGGCATTT 60.366 37.037 0.00 0.00 34.47 2.32
2037 4227 9.202273 GGCATTTTGTGACATCTTTAAACATAA 57.798 29.630 0.00 0.00 35.22 1.90
2055 4245 8.994429 AAACATAATTCACAGTTGTGTTTCAA 57.006 26.923 11.66 0.10 43.01 2.69
2056 4246 8.994429 AACATAATTCACAGTTGTGTTTCAAA 57.006 26.923 11.66 0.00 45.76 2.69
2057 4247 8.406172 ACATAATTCACAGTTGTGTTTCAAAC 57.594 30.769 11.66 0.00 45.76 2.93
2058 4248 8.250332 ACATAATTCACAGTTGTGTTTCAAACT 58.750 29.630 11.66 0.00 45.76 2.66
2084 4274 2.935955 CAAAGCGTGTGACCCGTC 59.064 61.111 0.00 0.00 0.00 4.79
2085 4275 2.280592 AAAGCGTGTGACCCGTCC 60.281 61.111 0.00 0.00 0.00 4.79
2086 4276 3.819877 AAAGCGTGTGACCCGTCCC 62.820 63.158 0.00 0.00 0.00 4.46
2100 4290 1.012486 CGTCCCGTGACAAGTAAGGC 61.012 60.000 0.00 0.00 41.85 4.35
2105 4295 0.320374 CGTGACAAGTAAGGCCCTCA 59.680 55.000 0.00 0.00 0.00 3.86
2220 4436 4.764823 TGTAAATTTTCATCGCCTGGAACT 59.235 37.500 0.00 0.00 0.00 3.01
2222 4438 6.601613 TGTAAATTTTCATCGCCTGGAACTAT 59.398 34.615 0.00 0.00 0.00 2.12
2229 4445 3.111853 TCGCCTGGAACTATAAGCATG 57.888 47.619 0.00 0.00 0.00 4.06
2243 4459 6.986817 ACTATAAGCATGTACTGATGTGGAAC 59.013 38.462 0.00 0.00 37.35 3.62
2260 4476 6.826668 TGTGGAACATATCGGTCTGATTAAT 58.173 36.000 0.00 0.00 45.67 1.40
2262 4478 7.773224 TGTGGAACATATCGGTCTGATTAATTT 59.227 33.333 0.00 0.00 45.67 1.82
2264 4480 7.990314 TGGAACATATCGGTCTGATTAATTTGA 59.010 33.333 0.00 0.00 38.57 2.69
2460 4676 0.249741 CGGTATAAGCAAGGACCCGG 60.250 60.000 0.00 0.00 0.00 5.73
2505 4721 4.820894 AGCGTACAATCCTTAAGTTCCT 57.179 40.909 0.97 0.00 0.00 3.36
2527 4743 7.358263 TCCTGATGAGGTCTCTATTTAGACTT 58.642 38.462 0.00 0.00 44.42 3.01
2531 4747 5.209659 TGAGGTCTCTATTTAGACTTCCCC 58.790 45.833 11.97 0.00 46.58 4.81
2532 4748 5.209659 GAGGTCTCTATTTAGACTTCCCCA 58.790 45.833 5.15 0.00 43.31 4.96
2534 4750 4.345547 GGTCTCTATTTAGACTTCCCCAGG 59.654 50.000 4.20 0.00 44.42 4.45
2535 4751 3.967987 TCTCTATTTAGACTTCCCCAGGC 59.032 47.826 0.00 0.00 0.00 4.85
2566 4786 3.565482 TCTTGCTTCAGTTTGTGGACATC 59.435 43.478 0.00 0.00 0.00 3.06
2577 4797 5.536161 AGTTTGTGGACATCTGCAAATAAGT 59.464 36.000 0.00 0.00 34.09 2.24
2595 4815 8.461222 CAAATAAGTTGTCCTGAATGATAGCAA 58.539 33.333 0.00 0.00 32.08 3.91
2598 4818 9.851686 ATAAGTTGTCCTGAATGATAGCAATAA 57.148 29.630 0.00 0.00 0.00 1.40
2599 4819 8.579850 AAGTTGTCCTGAATGATAGCAATAAA 57.420 30.769 0.00 0.00 0.00 1.40
2600 4820 7.989826 AGTTGTCCTGAATGATAGCAATAAAC 58.010 34.615 0.00 0.00 0.00 2.01
2601 4821 7.611467 AGTTGTCCTGAATGATAGCAATAAACA 59.389 33.333 0.00 0.00 0.00 2.83
2602 4822 7.936496 TGTCCTGAATGATAGCAATAAACAA 57.064 32.000 0.00 0.00 0.00 2.83
2603 4823 7.761409 TGTCCTGAATGATAGCAATAAACAAC 58.239 34.615 0.00 0.00 0.00 3.32
2604 4824 7.392953 TGTCCTGAATGATAGCAATAAACAACA 59.607 33.333 0.00 0.00 0.00 3.33
2605 4825 8.408601 GTCCTGAATGATAGCAATAAACAACAT 58.591 33.333 0.00 0.00 0.00 2.71
2606 4826 8.970020 TCCTGAATGATAGCAATAAACAACATT 58.030 29.630 0.00 0.00 0.00 2.71
2607 4827 9.590451 CCTGAATGATAGCAATAAACAACATTT 57.410 29.630 0.00 0.00 0.00 2.32
2660 4880 5.290643 GCTGAGTTCTAACTATGCTTGTCTG 59.709 44.000 10.45 0.00 39.88 3.51
2663 4883 7.615403 TGAGTTCTAACTATGCTTGTCTGATT 58.385 34.615 0.00 0.00 39.88 2.57
2667 4887 8.596380 GTTCTAACTATGCTTGTCTGATTGTAC 58.404 37.037 0.00 0.00 0.00 2.90
2672 4892 6.886459 ACTATGCTTGTCTGATTGTACCATTT 59.114 34.615 0.00 0.00 0.00 2.32
2677 4897 5.241403 TGTCTGATTGTACCATTTGACCT 57.759 39.130 9.26 0.00 0.00 3.85
2694 4915 3.153919 GACCTGTTCTGCCATTTTACCA 58.846 45.455 0.00 0.00 0.00 3.25
2703 4924 6.757897 TCTGCCATTTTACCAGTTAAGATG 57.242 37.500 0.00 0.00 33.76 2.90
2715 4936 4.576463 CCAGTTAAGATGGTAAGATGGTGC 59.424 45.833 0.00 0.00 32.85 5.01
2716 4937 5.185454 CAGTTAAGATGGTAAGATGGTGCA 58.815 41.667 0.00 0.00 0.00 4.57
2717 4938 5.647658 CAGTTAAGATGGTAAGATGGTGCAA 59.352 40.000 0.00 0.00 0.00 4.08
2718 4939 5.882557 AGTTAAGATGGTAAGATGGTGCAAG 59.117 40.000 0.00 0.00 0.00 4.01
2719 4940 4.307032 AAGATGGTAAGATGGTGCAAGT 57.693 40.909 0.00 0.00 0.00 3.16
2720 4941 3.614092 AGATGGTAAGATGGTGCAAGTG 58.386 45.455 0.00 0.00 0.00 3.16
2738 4967 5.277974 GCAAGTGTAAATGCAAGTCTTCTCA 60.278 40.000 0.00 0.00 42.12 3.27
2764 4993 4.301505 GCCATGCGTTCTTCCTGA 57.698 55.556 0.00 0.00 0.00 3.86
2765 4994 1.796796 GCCATGCGTTCTTCCTGAC 59.203 57.895 0.00 0.00 0.00 3.51
2778 5011 2.857186 TCCTGACTGCAGCAACATTA 57.143 45.000 15.27 0.64 40.91 1.90
2847 5087 1.488812 CGTTGAGGGGATGGGTTCATA 59.511 52.381 0.00 0.00 32.98 2.15
2851 5091 2.127708 GAGGGGATGGGTTCATAGTGT 58.872 52.381 0.00 0.00 32.98 3.55
2864 5114 2.906389 TCATAGTGTCTCCTTGCCACTT 59.094 45.455 0.00 0.00 39.90 3.16
2875 5125 4.880164 TCCTTGCCACTTATAGTAGAGGT 58.120 43.478 0.00 0.00 0.00 3.85
2927 5177 0.250209 GCAGAGGGCACGATGATCAT 60.250 55.000 8.25 8.25 43.97 2.45
2936 5186 1.141657 CACGATGATCATCCAAGGGGT 59.858 52.381 26.30 15.84 34.40 4.95
2943 5193 3.906218 TGATCATCCAAGGGGTATCTCAG 59.094 47.826 0.00 0.00 34.93 3.35
2945 5195 4.219392 TCATCCAAGGGGTATCTCAGAT 57.781 45.455 0.00 0.00 34.93 2.90
3358 5610 9.236006 AGCGCATCCTATTAGAAAATTAATCAT 57.764 29.630 11.47 0.00 0.00 2.45
3489 5741 2.087462 ATCAGGGAATCGCGATCGCA 62.087 55.000 36.45 24.48 42.06 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.802414 GCAAAGCCAAAGCGCGAG 60.802 61.111 12.10 0.00 46.67 5.03
21 22 3.733960 GGGAACGTCGGCAAAGCC 61.734 66.667 0.00 0.00 46.75 4.35
33 34 3.365265 CCAGCAAGGCACGGGAAC 61.365 66.667 0.00 0.00 0.00 3.62
34 35 3.884774 ACCAGCAAGGCACGGGAA 61.885 61.111 0.00 0.00 43.14 3.97
38 39 3.730761 GAGCACCAGCAAGGCACG 61.731 66.667 0.00 0.00 45.49 5.34
39 40 3.730761 CGAGCACCAGCAAGGCAC 61.731 66.667 0.00 0.00 45.49 5.01
42 43 4.711949 AGGCGAGCACCAGCAAGG 62.712 66.667 0.00 0.00 45.49 3.61
57 58 2.279784 GAGATGAAGGCGCCGAGG 60.280 66.667 23.20 0.00 0.00 4.63
58 59 2.656651 CGAGATGAAGGCGCCGAG 60.657 66.667 23.20 3.43 0.00 4.63
59 60 4.207281 CCGAGATGAAGGCGCCGA 62.207 66.667 23.20 9.85 0.00 5.54
60 61 4.514577 ACCGAGATGAAGGCGCCG 62.515 66.667 23.20 6.07 0.00 6.46
61 62 2.579684 AAGACCGAGATGAAGGCGCC 62.580 60.000 21.89 21.89 0.00 6.53
63 64 0.173481 TCAAGACCGAGATGAAGGCG 59.827 55.000 0.00 0.00 0.00 5.52
64 65 1.646189 GTCAAGACCGAGATGAAGGC 58.354 55.000 0.00 0.00 0.00 4.35
65 66 1.914634 CGTCAAGACCGAGATGAAGG 58.085 55.000 0.00 0.00 0.00 3.46
66 67 1.135257 AGCGTCAAGACCGAGATGAAG 60.135 52.381 0.00 0.00 0.00 3.02
67 68 0.888619 AGCGTCAAGACCGAGATGAA 59.111 50.000 0.00 0.00 0.00 2.57
68 69 0.888619 AAGCGTCAAGACCGAGATGA 59.111 50.000 0.00 0.00 0.00 2.92
69 70 1.272781 GAAGCGTCAAGACCGAGATG 58.727 55.000 0.00 0.00 0.00 2.90
70 71 0.179161 CGAAGCGTCAAGACCGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
71 72 1.209383 CGAAGCGTCAAGACCGAGA 59.791 57.895 0.00 0.00 0.00 4.04
85 86 5.694006 TGTGTTAAATCAATTTTGGGCGAAG 59.306 36.000 0.00 0.00 0.00 3.79
86 87 5.601662 TGTGTTAAATCAATTTTGGGCGAA 58.398 33.333 0.00 0.00 0.00 4.70
89 90 7.533561 CGAATTTGTGTTAAATCAATTTTGGGC 59.466 33.333 0.00 0.00 0.00 5.36
91 92 9.928236 AACGAATTTGTGTTAAATCAATTTTGG 57.072 25.926 0.00 7.94 0.00 3.28
99 100 8.756864 TGCCTAAAAACGAATTTGTGTTAAATC 58.243 29.630 1.45 0.00 0.00 2.17
101 102 8.381387 GTTGCCTAAAAACGAATTTGTGTTAAA 58.619 29.630 1.45 0.00 0.00 1.52
103 104 7.259161 AGTTGCCTAAAAACGAATTTGTGTTA 58.741 30.769 1.45 2.62 32.65 2.41
104 105 6.103330 AGTTGCCTAAAAACGAATTTGTGTT 58.897 32.000 0.00 0.00 32.65 3.32
106 107 6.582437 AAGTTGCCTAAAAACGAATTTGTG 57.418 33.333 0.00 0.00 32.65 3.33
107 108 7.259161 TGTAAGTTGCCTAAAAACGAATTTGT 58.741 30.769 0.00 0.00 32.65 2.83
108 109 7.687005 TGTAAGTTGCCTAAAAACGAATTTG 57.313 32.000 0.00 0.00 32.65 2.32
109 110 8.705048 TTTGTAAGTTGCCTAAAAACGAATTT 57.295 26.923 0.00 0.00 32.65 1.82
110 111 8.880878 ATTTGTAAGTTGCCTAAAAACGAATT 57.119 26.923 0.00 0.00 32.65 2.17
111 112 9.620660 CTATTTGTAAGTTGCCTAAAAACGAAT 57.379 29.630 0.00 0.00 32.65 3.34
112 113 7.592164 GCTATTTGTAAGTTGCCTAAAAACGAA 59.408 33.333 0.00 0.00 32.65 3.85
113 114 7.040961 AGCTATTTGTAAGTTGCCTAAAAACGA 60.041 33.333 0.00 0.00 32.65 3.85
115 116 9.338291 GTAGCTATTTGTAAGTTGCCTAAAAAC 57.662 33.333 0.00 0.00 0.00 2.43
118 119 8.098286 TGAGTAGCTATTTGTAAGTTGCCTAAA 58.902 33.333 0.00 0.00 0.00 1.85
119 120 7.548075 GTGAGTAGCTATTTGTAAGTTGCCTAA 59.452 37.037 0.00 0.00 0.00 2.69
120 121 7.039882 GTGAGTAGCTATTTGTAAGTTGCCTA 58.960 38.462 0.00 0.00 0.00 3.93
121 122 5.875359 GTGAGTAGCTATTTGTAAGTTGCCT 59.125 40.000 0.00 0.00 0.00 4.75
122 123 5.875359 AGTGAGTAGCTATTTGTAAGTTGCC 59.125 40.000 0.00 0.00 0.00 4.52
123 124 6.183360 CCAGTGAGTAGCTATTTGTAAGTTGC 60.183 42.308 0.00 0.00 0.00 4.17
124 125 6.874134 ACCAGTGAGTAGCTATTTGTAAGTTG 59.126 38.462 0.00 0.00 0.00 3.16
125 126 7.005709 ACCAGTGAGTAGCTATTTGTAAGTT 57.994 36.000 0.00 0.00 0.00 2.66
126 127 6.607004 ACCAGTGAGTAGCTATTTGTAAGT 57.393 37.500 0.00 0.00 0.00 2.24
127 128 7.907214 AAACCAGTGAGTAGCTATTTGTAAG 57.093 36.000 0.00 0.00 0.00 2.34
128 129 9.953565 ATAAAACCAGTGAGTAGCTATTTGTAA 57.046 29.630 0.00 0.00 0.00 2.41
130 131 8.863872 AATAAAACCAGTGAGTAGCTATTTGT 57.136 30.769 0.00 0.00 0.00 2.83
133 134 9.601217 CAGTAATAAAACCAGTGAGTAGCTATT 57.399 33.333 0.00 0.00 0.00 1.73
134 135 8.759782 ACAGTAATAAAACCAGTGAGTAGCTAT 58.240 33.333 0.00 0.00 0.00 2.97
135 136 8.130671 ACAGTAATAAAACCAGTGAGTAGCTA 57.869 34.615 0.00 0.00 0.00 3.32
136 137 7.005709 ACAGTAATAAAACCAGTGAGTAGCT 57.994 36.000 0.00 0.00 0.00 3.32
138 139 9.355215 CAGTACAGTAATAAAACCAGTGAGTAG 57.645 37.037 0.00 0.00 0.00 2.57
139 140 8.308931 CCAGTACAGTAATAAAACCAGTGAGTA 58.691 37.037 0.00 0.00 0.00 2.59
140 141 7.015877 TCCAGTACAGTAATAAAACCAGTGAGT 59.984 37.037 0.00 0.00 0.00 3.41
141 142 7.383687 TCCAGTACAGTAATAAAACCAGTGAG 58.616 38.462 0.00 0.00 0.00 3.51
142 143 7.305813 TCCAGTACAGTAATAAAACCAGTGA 57.694 36.000 0.00 0.00 0.00 3.41
143 144 7.972832 TTCCAGTACAGTAATAAAACCAGTG 57.027 36.000 0.00 0.00 0.00 3.66
144 145 9.010029 CATTTCCAGTACAGTAATAAAACCAGT 57.990 33.333 0.00 0.00 0.00 4.00
145 146 9.226606 TCATTTCCAGTACAGTAATAAAACCAG 57.773 33.333 0.00 0.00 0.00 4.00
146 147 9.747898 ATCATTTCCAGTACAGTAATAAAACCA 57.252 29.630 0.00 0.00 0.00 3.67
149 150 8.682710 GCCATCATTTCCAGTACAGTAATAAAA 58.317 33.333 0.00 0.00 0.00 1.52
154 155 5.435686 AGCCATCATTTCCAGTACAGTAA 57.564 39.130 0.00 0.00 0.00 2.24
155 156 5.897250 TCTAGCCATCATTTCCAGTACAGTA 59.103 40.000 0.00 0.00 0.00 2.74
156 157 4.716784 TCTAGCCATCATTTCCAGTACAGT 59.283 41.667 0.00 0.00 0.00 3.55
157 158 5.282055 TCTAGCCATCATTTCCAGTACAG 57.718 43.478 0.00 0.00 0.00 2.74
158 159 5.692115 TTCTAGCCATCATTTCCAGTACA 57.308 39.130 0.00 0.00 0.00 2.90
159 160 7.095017 GCTATTTCTAGCCATCATTTCCAGTAC 60.095 40.741 0.00 0.00 43.90 2.73
160 161 6.936900 GCTATTTCTAGCCATCATTTCCAGTA 59.063 38.462 0.00 0.00 43.90 2.74
161 162 5.767168 GCTATTTCTAGCCATCATTTCCAGT 59.233 40.000 0.00 0.00 43.90 4.00
162 163 6.251655 GCTATTTCTAGCCATCATTTCCAG 57.748 41.667 0.00 0.00 43.90 3.86
176 177 8.588290 TTTGAAATTGGGCTAAGCTATTTCTA 57.412 30.769 14.01 6.65 34.90 2.10
177 178 7.480760 TTTGAAATTGGGCTAAGCTATTTCT 57.519 32.000 14.01 0.00 34.90 2.52
179 180 8.374743 TCTTTTTGAAATTGGGCTAAGCTATTT 58.625 29.630 0.00 0.00 0.00 1.40
181 182 7.364144 CCTCTTTTTGAAATTGGGCTAAGCTAT 60.364 37.037 0.00 0.00 0.00 2.97
182 183 6.071391 CCTCTTTTTGAAATTGGGCTAAGCTA 60.071 38.462 0.00 0.00 0.00 3.32
184 185 4.931601 CCTCTTTTTGAAATTGGGCTAAGC 59.068 41.667 0.00 0.00 0.00 3.09
185 186 6.345096 TCCTCTTTTTGAAATTGGGCTAAG 57.655 37.500 0.00 0.00 0.00 2.18
186 187 6.739331 TTCCTCTTTTTGAAATTGGGCTAA 57.261 33.333 0.00 0.00 0.00 3.09
189 190 5.610398 TCTTTCCTCTTTTTGAAATTGGGC 58.390 37.500 0.00 0.00 30.67 5.36
190 191 8.504812 TTTTCTTTCCTCTTTTTGAAATTGGG 57.495 30.769 0.00 0.00 30.67 4.12
191 192 9.166173 ACTTTTCTTTCCTCTTTTTGAAATTGG 57.834 29.630 0.00 0.00 30.67 3.16
199 200 9.368416 AGCCTATTACTTTTCTTTCCTCTTTTT 57.632 29.630 0.00 0.00 0.00 1.94
200 201 8.797438 CAGCCTATTACTTTTCTTTCCTCTTTT 58.203 33.333 0.00 0.00 0.00 2.27
201 202 7.094162 GCAGCCTATTACTTTTCTTTCCTCTTT 60.094 37.037 0.00 0.00 0.00 2.52
202 203 6.375736 GCAGCCTATTACTTTTCTTTCCTCTT 59.624 38.462 0.00 0.00 0.00 2.85
203 204 5.883115 GCAGCCTATTACTTTTCTTTCCTCT 59.117 40.000 0.00 0.00 0.00 3.69
205 206 4.950475 GGCAGCCTATTACTTTTCTTTCCT 59.050 41.667 3.29 0.00 0.00 3.36
206 207 4.098044 GGGCAGCCTATTACTTTTCTTTCC 59.902 45.833 12.43 0.00 0.00 3.13
207 208 4.705023 TGGGCAGCCTATTACTTTTCTTTC 59.295 41.667 12.43 0.00 0.00 2.62
209 210 4.316025 TGGGCAGCCTATTACTTTTCTT 57.684 40.909 12.43 0.00 0.00 2.52
210 211 4.316025 TTGGGCAGCCTATTACTTTTCT 57.684 40.909 12.43 0.00 0.00 2.52
211 212 4.219725 TGTTTGGGCAGCCTATTACTTTTC 59.780 41.667 12.43 0.00 0.00 2.29
212 213 4.156477 TGTTTGGGCAGCCTATTACTTTT 58.844 39.130 12.43 0.00 0.00 2.27
213 214 3.763897 CTGTTTGGGCAGCCTATTACTTT 59.236 43.478 12.43 0.00 0.00 2.66
216 217 2.024414 CCTGTTTGGGCAGCCTATTAC 58.976 52.381 12.43 7.48 35.28 1.89
217 218 1.919654 TCCTGTTTGGGCAGCCTATTA 59.080 47.619 12.43 0.00 35.28 0.98
218 219 0.704076 TCCTGTTTGGGCAGCCTATT 59.296 50.000 12.43 0.00 35.28 1.73
222 223 0.817654 GTTATCCTGTTTGGGCAGCC 59.182 55.000 1.26 1.26 35.28 4.85
223 224 1.839424 AGTTATCCTGTTTGGGCAGC 58.161 50.000 0.00 0.00 35.28 5.25
225 226 2.356741 GGCTAGTTATCCTGTTTGGGCA 60.357 50.000 0.00 0.00 36.20 5.36
226 227 2.298610 GGCTAGTTATCCTGTTTGGGC 58.701 52.381 0.00 0.00 36.20 5.36
227 228 2.241176 TGGGCTAGTTATCCTGTTTGGG 59.759 50.000 0.00 0.00 36.20 4.12
228 229 3.644966 TGGGCTAGTTATCCTGTTTGG 57.355 47.619 0.00 0.00 37.10 3.28
229 230 6.152661 TGAAATTGGGCTAGTTATCCTGTTTG 59.847 38.462 0.00 0.00 0.00 2.93
230 231 6.252995 TGAAATTGGGCTAGTTATCCTGTTT 58.747 36.000 0.00 0.00 0.00 2.83
232 233 5.450818 TGAAATTGGGCTAGTTATCCTGT 57.549 39.130 0.00 0.00 0.00 4.00
233 234 6.773976 TTTGAAATTGGGCTAGTTATCCTG 57.226 37.500 0.00 0.00 0.00 3.86
234 235 7.673926 TCTTTTTGAAATTGGGCTAGTTATCCT 59.326 33.333 0.00 0.00 0.00 3.24
235 236 7.836842 TCTTTTTGAAATTGGGCTAGTTATCC 58.163 34.615 0.00 0.00 0.00 2.59
236 237 9.358872 CTTCTTTTTGAAATTGGGCTAGTTATC 57.641 33.333 0.00 0.00 33.79 1.75
237 238 9.088987 TCTTCTTTTTGAAATTGGGCTAGTTAT 57.911 29.630 0.00 0.00 33.79 1.89
238 239 8.472007 TCTTCTTTTTGAAATTGGGCTAGTTA 57.528 30.769 0.00 0.00 33.79 2.24
239 240 7.360113 TCTTCTTTTTGAAATTGGGCTAGTT 57.640 32.000 0.00 0.00 33.79 2.24
240 241 6.976934 TCTTCTTTTTGAAATTGGGCTAGT 57.023 33.333 0.00 0.00 33.79 2.57
241 242 8.143835 TCTTTCTTCTTTTTGAAATTGGGCTAG 58.856 33.333 0.00 0.00 33.79 3.42
242 243 8.017418 TCTTTCTTCTTTTTGAAATTGGGCTA 57.983 30.769 0.00 0.00 33.79 3.93
243 244 6.888105 TCTTTCTTCTTTTTGAAATTGGGCT 58.112 32.000 0.00 0.00 33.79 5.19
244 245 7.552458 TTCTTTCTTCTTTTTGAAATTGGGC 57.448 32.000 0.00 0.00 33.79 5.36
245 246 9.992910 CTTTTCTTTCTTCTTTTTGAAATTGGG 57.007 29.630 0.00 0.00 33.79 4.12
255 256 9.755804 CAGCCTATTTCTTTTCTTTCTTCTTTT 57.244 29.630 0.00 0.00 0.00 2.27
256 257 7.869937 GCAGCCTATTTCTTTTCTTTCTTCTTT 59.130 33.333 0.00 0.00 0.00 2.52
258 259 6.071672 GGCAGCCTATTTCTTTTCTTTCTTCT 60.072 38.462 3.29 0.00 0.00 2.85
260 261 5.047021 GGGCAGCCTATTTCTTTTCTTTCTT 60.047 40.000 12.43 0.00 0.00 2.52
262 263 4.220602 TGGGCAGCCTATTTCTTTTCTTTC 59.779 41.667 12.43 0.00 0.00 2.62
263 264 4.021104 GTGGGCAGCCTATTTCTTTTCTTT 60.021 41.667 12.43 0.00 0.00 2.52
264 265 3.511540 GTGGGCAGCCTATTTCTTTTCTT 59.488 43.478 12.43 0.00 0.00 2.52
266 267 2.825532 TGTGGGCAGCCTATTTCTTTTC 59.174 45.455 12.43 0.00 0.00 2.29
267 268 2.562738 GTGTGGGCAGCCTATTTCTTTT 59.437 45.455 12.43 0.00 0.00 2.27
268 269 2.171003 GTGTGGGCAGCCTATTTCTTT 58.829 47.619 12.43 0.00 0.00 2.52
270 271 0.698238 TGTGTGGGCAGCCTATTTCT 59.302 50.000 12.43 0.00 0.00 2.52
271 272 1.098050 CTGTGTGGGCAGCCTATTTC 58.902 55.000 12.43 0.67 0.00 2.17
273 274 0.698238 TTCTGTGTGGGCAGCCTATT 59.302 50.000 12.43 0.00 36.49 1.73
274 275 0.921896 ATTCTGTGTGGGCAGCCTAT 59.078 50.000 12.43 0.00 36.49 2.57
275 276 1.578897 TATTCTGTGTGGGCAGCCTA 58.421 50.000 12.43 0.81 36.49 3.93
277 278 0.811281 GTTATTCTGTGTGGGCAGCC 59.189 55.000 1.26 1.26 36.49 4.85
278 279 1.740025 GAGTTATTCTGTGTGGGCAGC 59.260 52.381 0.00 0.00 36.49 5.25
279 280 3.340814 AGAGTTATTCTGTGTGGGCAG 57.659 47.619 0.00 0.00 33.93 4.85
280 281 3.368013 CGTAGAGTTATTCTGTGTGGGCA 60.368 47.826 0.00 0.00 36.61 5.36
281 282 3.187700 CGTAGAGTTATTCTGTGTGGGC 58.812 50.000 0.00 0.00 36.61 5.36
282 283 4.174009 CACGTAGAGTTATTCTGTGTGGG 58.826 47.826 0.00 0.00 38.07 4.61
284 285 6.200286 ACAAACACGTAGAGTTATTCTGTGTG 59.800 38.462 8.70 8.70 41.16 3.82
285 286 6.200286 CACAAACACGTAGAGTTATTCTGTGT 59.800 38.462 9.76 0.00 41.16 3.72
286 287 6.419710 TCACAAACACGTAGAGTTATTCTGTG 59.580 38.462 10.96 10.96 41.16 3.66
289 290 7.381678 GTCTTCACAAACACGTAGAGTTATTCT 59.618 37.037 0.00 0.00 41.16 2.40
290 291 7.168637 TGTCTTCACAAACACGTAGAGTTATTC 59.831 37.037 0.00 0.00 41.16 1.75
292 293 6.509656 TGTCTTCACAAACACGTAGAGTTAT 58.490 36.000 0.00 0.00 41.16 1.89
294 295 4.751060 TGTCTTCACAAACACGTAGAGTT 58.249 39.130 0.00 0.00 44.53 3.01
295 296 4.380841 TGTCTTCACAAACACGTAGAGT 57.619 40.909 0.00 0.00 0.00 3.24
296 297 5.712217 TTTGTCTTCACAAACACGTAGAG 57.288 39.130 0.00 0.00 45.73 2.43
306 307 6.915300 CCGTGACAATAAATTTGTCTTCACAA 59.085 34.615 19.79 0.00 46.53 3.33
307 308 6.434596 CCGTGACAATAAATTTGTCTTCACA 58.565 36.000 19.79 4.83 46.53 3.58
308 309 5.342259 GCCGTGACAATAAATTTGTCTTCAC 59.658 40.000 16.72 14.18 46.53 3.18
310 311 5.569059 CAGCCGTGACAATAAATTTGTCTTC 59.431 40.000 16.72 10.35 46.53 2.87
312 313 4.615912 GCAGCCGTGACAATAAATTTGTCT 60.616 41.667 16.72 0.00 46.53 3.41
313 314 3.608073 GCAGCCGTGACAATAAATTTGTC 59.392 43.478 10.71 10.71 46.57 3.18
316 317 3.255642 ACAGCAGCCGTGACAATAAATTT 59.744 39.130 0.00 0.00 0.00 1.82
317 318 2.819608 ACAGCAGCCGTGACAATAAATT 59.180 40.909 0.00 0.00 0.00 1.82
318 319 2.436417 ACAGCAGCCGTGACAATAAAT 58.564 42.857 0.00 0.00 0.00 1.40
320 321 2.289133 TGTACAGCAGCCGTGACAATAA 60.289 45.455 0.00 0.00 0.00 1.40
321 322 1.273886 TGTACAGCAGCCGTGACAATA 59.726 47.619 0.00 0.00 0.00 1.90
324 325 0.670239 CATGTACAGCAGCCGTGACA 60.670 55.000 0.33 0.00 0.00 3.58
325 326 0.670546 ACATGTACAGCAGCCGTGAC 60.671 55.000 0.00 0.00 0.00 3.67
327 328 0.874390 AAACATGTACAGCAGCCGTG 59.126 50.000 0.00 0.00 0.00 4.94
328 329 1.156736 GAAACATGTACAGCAGCCGT 58.843 50.000 0.00 0.00 0.00 5.68
329 330 1.129251 CAGAAACATGTACAGCAGCCG 59.871 52.381 0.00 0.00 0.00 5.52
330 331 1.135575 GCAGAAACATGTACAGCAGCC 60.136 52.381 0.00 0.00 0.00 4.85
331 332 1.536766 TGCAGAAACATGTACAGCAGC 59.463 47.619 15.21 9.06 0.00 5.25
332 333 3.003585 TGTTGCAGAAACATGTACAGCAG 59.996 43.478 17.28 0.00 43.96 4.24
333 334 2.948315 TGTTGCAGAAACATGTACAGCA 59.052 40.909 15.21 15.21 43.96 4.41
354 355 4.054780 TCACGTAGCAGAACTTGTTTCT 57.945 40.909 0.00 0.00 46.29 2.52
355 356 4.992381 ATCACGTAGCAGAACTTGTTTC 57.008 40.909 0.00 0.00 33.95 2.78
356 357 4.574828 ACAATCACGTAGCAGAACTTGTTT 59.425 37.500 0.00 0.00 0.00 2.83
357 358 4.127171 ACAATCACGTAGCAGAACTTGTT 58.873 39.130 0.00 0.00 0.00 2.83
359 360 4.923871 ACTACAATCACGTAGCAGAACTTG 59.076 41.667 0.00 0.00 42.23 3.16
360 361 5.135508 ACTACAATCACGTAGCAGAACTT 57.864 39.130 0.00 0.00 42.23 2.66
363 364 6.694877 ATCTACTACAATCACGTAGCAGAA 57.305 37.500 5.40 0.00 42.43 3.02
364 365 6.095021 ACAATCTACTACAATCACGTAGCAGA 59.905 38.462 4.05 4.05 43.01 4.26
365 366 6.266323 ACAATCTACTACAATCACGTAGCAG 58.734 40.000 0.00 0.00 42.23 4.24
366 367 6.203808 ACAATCTACTACAATCACGTAGCA 57.796 37.500 0.00 0.00 42.23 3.49
367 368 7.416022 AGTACAATCTACTACAATCACGTAGC 58.584 38.462 0.00 0.00 42.23 3.58
368 369 8.828644 AGAGTACAATCTACTACAATCACGTAG 58.171 37.037 0.00 0.00 43.76 3.51
369 370 8.728337 AGAGTACAATCTACTACAATCACGTA 57.272 34.615 0.00 0.00 0.00 3.57
371 372 7.921787 AGAGAGTACAATCTACTACAATCACG 58.078 38.462 0.00 0.00 0.00 4.35
388 389 9.955310 GCGAAGTAAATAAAAGAAAGAGAGTAC 57.045 33.333 0.00 0.00 0.00 2.73
389 390 9.701098 TGCGAAGTAAATAAAAGAAAGAGAGTA 57.299 29.630 0.00 0.00 0.00 2.59
390 391 8.603242 TGCGAAGTAAATAAAAGAAAGAGAGT 57.397 30.769 0.00 0.00 0.00 3.24
403 404 9.502091 AGCCAAATCTAATATGCGAAGTAAATA 57.498 29.630 0.00 0.00 0.00 1.40
405 406 7.497579 TCAGCCAAATCTAATATGCGAAGTAAA 59.502 33.333 0.00 0.00 0.00 2.01
406 407 6.989759 TCAGCCAAATCTAATATGCGAAGTAA 59.010 34.615 0.00 0.00 0.00 2.24
407 408 6.521162 TCAGCCAAATCTAATATGCGAAGTA 58.479 36.000 0.00 0.00 0.00 2.24
410 411 5.822519 ACTTCAGCCAAATCTAATATGCGAA 59.177 36.000 0.00 0.00 0.00 4.70
411 412 5.368145 ACTTCAGCCAAATCTAATATGCGA 58.632 37.500 0.00 0.00 0.00 5.10
412 413 5.237127 TGACTTCAGCCAAATCTAATATGCG 59.763 40.000 0.00 0.00 0.00 4.73
413 414 6.624352 TGACTTCAGCCAAATCTAATATGC 57.376 37.500 0.00 0.00 0.00 3.14
415 416 8.814038 AGTTTGACTTCAGCCAAATCTAATAT 57.186 30.769 0.00 0.00 35.14 1.28
584 585 8.325282 CGATCAAAATACATTTGCGTACTTAGA 58.675 33.333 0.00 0.00 46.53 2.10
585 586 8.114290 ACGATCAAAATACATTTGCGTACTTAG 58.886 33.333 0.00 0.00 46.53 2.18
586 587 7.966111 ACGATCAAAATACATTTGCGTACTTA 58.034 30.769 0.00 0.00 46.53 2.24
588 589 6.417191 ACGATCAAAATACATTTGCGTACT 57.583 33.333 0.00 0.00 46.53 2.73
590 591 6.024664 CCAACGATCAAAATACATTTGCGTA 58.975 36.000 0.00 0.00 46.53 4.42
593 594 5.003402 CGTCCAACGATCAAAATACATTTGC 59.997 40.000 0.00 0.00 46.05 3.68
595 596 6.489127 TCGTCCAACGATCAAAATACATTT 57.511 33.333 0.00 0.00 46.73 2.32
609 610 1.397945 CGTGGTTGAAATCGTCCAACG 60.398 52.381 0.00 0.00 42.47 4.10
610 611 1.600485 ACGTGGTTGAAATCGTCCAAC 59.400 47.619 0.00 0.00 41.24 3.77
611 612 1.600013 CACGTGGTTGAAATCGTCCAA 59.400 47.619 7.95 0.00 34.30 3.53
612 613 1.202545 TCACGTGGTTGAAATCGTCCA 60.203 47.619 17.00 0.00 34.30 4.02
613 614 1.459592 CTCACGTGGTTGAAATCGTCC 59.540 52.381 17.00 0.00 34.30 4.79
614 615 1.136336 GCTCACGTGGTTGAAATCGTC 60.136 52.381 17.00 0.00 34.30 4.20
615 616 0.865769 GCTCACGTGGTTGAAATCGT 59.134 50.000 17.00 0.00 36.99 3.73
616 617 0.179250 CGCTCACGTGGTTGAAATCG 60.179 55.000 17.00 0.00 33.53 3.34
617 618 0.165944 CCGCTCACGTGGTTGAAATC 59.834 55.000 17.00 0.00 37.70 2.17
618 619 2.244000 CCGCTCACGTGGTTGAAAT 58.756 52.632 17.00 0.00 37.70 2.17
619 620 3.725819 CCGCTCACGTGGTTGAAA 58.274 55.556 17.00 0.00 37.70 2.69
625 626 2.126071 CACCTACCGCTCACGTGG 60.126 66.667 17.00 7.71 46.44 4.94
626 627 1.154016 CTCACCTACCGCTCACGTG 60.154 63.158 9.94 9.94 37.70 4.49
627 628 2.991076 GCTCACCTACCGCTCACGT 61.991 63.158 0.00 0.00 37.70 4.49
628 629 2.202623 GCTCACCTACCGCTCACG 60.203 66.667 0.00 0.00 39.67 4.35
629 630 2.202623 CGCTCACCTACCGCTCAC 60.203 66.667 0.00 0.00 0.00 3.51
630 631 2.360726 TCGCTCACCTACCGCTCA 60.361 61.111 0.00 0.00 0.00 4.26
632 633 3.141488 CCTCGCTCACCTACCGCT 61.141 66.667 0.00 0.00 0.00 5.52
633 634 4.874977 GCCTCGCTCACCTACCGC 62.875 72.222 0.00 0.00 0.00 5.68
644 645 1.266718 CATCTGTCTAGAGAGCCTCGC 59.733 57.143 12.02 0.00 36.14 5.03
645 646 2.290367 CACATCTGTCTAGAGAGCCTCG 59.710 54.545 12.02 3.17 36.14 4.63
648 649 1.068434 GCCACATCTGTCTAGAGAGCC 59.932 57.143 12.02 0.00 36.14 4.70
649 650 1.268999 CGCCACATCTGTCTAGAGAGC 60.269 57.143 12.02 0.00 36.14 4.09
650 651 1.336440 CCGCCACATCTGTCTAGAGAG 59.664 57.143 10.64 10.64 36.14 3.20
651 652 1.393603 CCGCCACATCTGTCTAGAGA 58.606 55.000 0.00 0.00 36.14 3.10
652 653 0.249238 GCCGCCACATCTGTCTAGAG 60.249 60.000 0.00 0.00 36.14 2.43
653 654 1.816537 GCCGCCACATCTGTCTAGA 59.183 57.895 0.00 0.00 37.35 2.43
655 656 2.494445 CGCCGCCACATCTGTCTA 59.506 61.111 0.00 0.00 0.00 2.59
690 694 1.038130 AGACGAGGGAGGATGGAACG 61.038 60.000 0.00 0.00 0.00 3.95
696 700 1.133419 GGGTAGAAGACGAGGGAGGAT 60.133 57.143 0.00 0.00 0.00 3.24
701 705 3.951765 GGGGGTAGAAGACGAGGG 58.048 66.667 0.00 0.00 0.00 4.30
766 770 4.214383 CTGCAACGGCGATGCGAG 62.214 66.667 31.65 25.28 46.76 5.03
834 857 3.952628 GAAACAGGGGGCGGACGAG 62.953 68.421 0.00 0.00 0.00 4.18
839 862 4.659172 TGCAGAAACAGGGGGCGG 62.659 66.667 0.00 0.00 0.00 6.13
856 880 1.005215 CTGGATGGCTGGAGGTTTCTT 59.995 52.381 0.00 0.00 0.00 2.52
868 892 2.203451 CCTGGATGGCTGGATGGC 60.203 66.667 0.00 0.00 42.18 4.40
869 893 2.519441 CCCTGGATGGCTGGATGG 59.481 66.667 0.00 0.00 0.00 3.51
958 995 4.884744 TCAAAGGAACATGAAAGGTTTCGA 59.115 37.500 0.00 0.00 43.10 3.71
960 997 6.986231 ACAATCAAAGGAACATGAAAGGTTTC 59.014 34.615 0.00 0.00 43.10 2.78
971 1008 1.001487 CGCAGCACAATCAAAGGAACA 60.001 47.619 0.00 0.00 0.00 3.18
972 1009 1.689959 CGCAGCACAATCAAAGGAAC 58.310 50.000 0.00 0.00 0.00 3.62
1042 1079 2.129607 CTCACATTTGTTTGCAGGTGC 58.870 47.619 0.00 0.00 42.50 5.01
1044 1081 1.069049 GGCTCACATTTGTTTGCAGGT 59.931 47.619 6.90 0.00 0.00 4.00
1089 1126 1.899814 ACAAGGCAGGATGAACGACTA 59.100 47.619 0.00 0.00 39.69 2.59
1091 1128 1.523758 AACAAGGCAGGATGAACGAC 58.476 50.000 0.00 0.00 39.69 4.34
1111 1148 0.397187 TACGGCCAAACAAGTGCCTA 59.603 50.000 2.24 0.00 43.12 3.93
1112 1149 0.889186 CTACGGCCAAACAAGTGCCT 60.889 55.000 2.24 0.00 43.12 4.75
1123 1184 2.948979 CCAATTTCTAATGCTACGGCCA 59.051 45.455 2.24 0.00 37.74 5.36
1125 1186 4.335594 AGTTCCAATTTCTAATGCTACGGC 59.664 41.667 0.00 0.00 39.26 5.68
1126 1187 5.730568 GCAGTTCCAATTTCTAATGCTACGG 60.731 44.000 0.00 0.00 0.00 4.02
1127 1188 5.266242 GCAGTTCCAATTTCTAATGCTACG 58.734 41.667 0.00 0.00 0.00 3.51
1149 3332 2.876368 ATCCTAGTGGCGCAGTTGGC 62.876 60.000 10.83 0.00 39.90 4.52
1153 3336 2.036475 CTGATAATCCTAGTGGCGCAGT 59.964 50.000 10.83 0.57 0.00 4.40
1155 3338 1.270305 GCTGATAATCCTAGTGGCGCA 60.270 52.381 10.83 0.00 0.00 6.09
1163 3346 0.243907 GAGCGCGGCTGATAATCCTA 59.756 55.000 8.83 0.00 39.88 2.94
1173 3356 1.520342 GAGAGAATTGAGCGCGGCT 60.520 57.895 8.83 5.31 43.88 5.52
1176 3359 1.929169 TGAATGAGAGAATTGAGCGCG 59.071 47.619 0.00 0.00 0.00 6.86
1190 3373 6.568869 CCGCCCTAAACAATAAAATGAATGA 58.431 36.000 0.00 0.00 0.00 2.57
1221 3404 2.870035 GCATTTTAACCAGTGGCAACCC 60.870 50.000 9.78 0.00 0.00 4.11
1245 3428 1.712081 CTCGCTTGCTGGACGAATG 59.288 57.895 0.00 0.00 35.07 2.67
1295 3478 1.878656 CGTTTCTCTCCGCACCCTCT 61.879 60.000 0.00 0.00 0.00 3.69
1320 3503 4.475944 GTGATGCCACACATTTTGACTAC 58.524 43.478 5.66 0.00 42.72 2.73
1362 3545 4.074526 TCCAGCCTCTGCAGCGAC 62.075 66.667 9.47 0.00 41.13 5.19
1371 3554 3.879892 CCAATAAGTTTAGCTCCAGCCTC 59.120 47.826 0.00 0.00 43.38 4.70
1391 3574 3.269381 ACTTAGGCCAAAGAATCATCCCA 59.731 43.478 5.01 0.00 0.00 4.37
1421 3604 1.784525 CTTCCGACAGTTGGACAGAC 58.215 55.000 9.35 0.00 34.56 3.51
1436 3619 4.061596 CTCTGGATATTTCCTTCGCTTCC 58.938 47.826 3.72 0.00 43.07 3.46
1567 3750 1.211457 AGATTAGCAGCAACCAGGGAG 59.789 52.381 0.00 0.00 0.00 4.30
1571 3754 4.399004 AGTAGAGATTAGCAGCAACCAG 57.601 45.455 0.00 0.00 0.00 4.00
1574 3757 5.751028 CCAAGTAGTAGAGATTAGCAGCAAC 59.249 44.000 0.00 0.00 0.00 4.17
1575 3758 5.422331 ACCAAGTAGTAGAGATTAGCAGCAA 59.578 40.000 0.00 0.00 0.00 3.91
1607 3790 2.880890 AGACTAGCAAAACAAGCCACTG 59.119 45.455 0.00 0.00 0.00 3.66
1608 3791 3.214696 AGACTAGCAAAACAAGCCACT 57.785 42.857 0.00 0.00 0.00 4.00
1612 3795 6.300354 TCAGTAAAGACTAGCAAAACAAGC 57.700 37.500 0.00 0.00 33.32 4.01
1619 3802 5.639506 GCAACTGATCAGTAAAGACTAGCAA 59.360 40.000 28.10 0.00 41.58 3.91
1647 3830 5.658634 AGAACTATCTCCATGAAGCTGTGTA 59.341 40.000 0.00 0.00 0.00 2.90
1704 3887 9.541143 TCAGCATTAAGAACATATACAATTCGA 57.459 29.630 0.00 0.00 0.00 3.71
1732 3915 6.318900 GGAGAATTGATAAGTTTTCCATCCGT 59.681 38.462 0.00 0.00 31.02 4.69
1763 3946 5.452255 ACCAGTCAATGCCATATTCTTCAT 58.548 37.500 0.00 0.00 0.00 2.57
1775 3958 2.102252 TCCACCAAAAACCAGTCAATGC 59.898 45.455 0.00 0.00 0.00 3.56
1797 3980 0.178903 ACCTTCCACCCTCTGCACTA 60.179 55.000 0.00 0.00 0.00 2.74
1834 4017 5.469421 AGGATATTAGAGAGTACGACAACCG 59.531 44.000 0.00 0.00 45.44 4.44
1856 4039 7.259290 ACTAGTACAACAACAAACATCAAGG 57.741 36.000 0.00 0.00 0.00 3.61
1886 4069 1.099689 AGAGCTTCACTAGTCTCCGC 58.900 55.000 5.85 1.32 31.42 5.54
1914 4097 3.671008 TCTTTGGCGAGTAACTGCTAA 57.329 42.857 0.00 0.00 0.00 3.09
1916 4099 2.543777 TTCTTTGGCGAGTAACTGCT 57.456 45.000 0.00 0.00 0.00 4.24
1917 4100 4.570772 TGATATTCTTTGGCGAGTAACTGC 59.429 41.667 0.00 0.00 0.00 4.40
1958 4141 8.342634 TCAAACTACTAAAGCACAAAAGACATC 58.657 33.333 0.00 0.00 0.00 3.06
1961 4144 7.694886 ACTCAAACTACTAAAGCACAAAAGAC 58.305 34.615 0.00 0.00 0.00 3.01
1965 4148 6.764085 TGCTACTCAAACTACTAAAGCACAAA 59.236 34.615 0.00 0.00 34.05 2.83
1971 4154 6.282199 TCCCTGCTACTCAAACTACTAAAG 57.718 41.667 0.00 0.00 0.00 1.85
1982 4165 3.806949 AAACCAAATCCCTGCTACTCA 57.193 42.857 0.00 0.00 0.00 3.41
1983 4166 5.125578 CCTTTAAACCAAATCCCTGCTACTC 59.874 44.000 0.00 0.00 0.00 2.59
1990 4173 5.208890 GCCTATCCTTTAAACCAAATCCCT 58.791 41.667 0.00 0.00 0.00 4.20
2004 4187 5.513233 AGATGTCACAAAATGCCTATCCTT 58.487 37.500 0.00 0.00 0.00 3.36
2044 4234 5.121454 TGCCATTGAAAGTTTGAAACACAAC 59.879 36.000 11.02 3.73 38.29 3.32
2046 4236 4.825422 TGCCATTGAAAGTTTGAAACACA 58.175 34.783 11.02 4.87 0.00 3.72
2047 4237 5.793026 TTGCCATTGAAAGTTTGAAACAC 57.207 34.783 11.02 2.34 0.00 3.32
2051 4241 3.555139 CGCTTTGCCATTGAAAGTTTGAA 59.445 39.130 0.00 0.00 33.66 2.69
2053 4243 2.865551 ACGCTTTGCCATTGAAAGTTTG 59.134 40.909 0.00 0.00 33.66 2.93
2054 4244 2.865551 CACGCTTTGCCATTGAAAGTTT 59.134 40.909 0.00 0.00 33.66 2.66
2055 4245 2.159114 ACACGCTTTGCCATTGAAAGTT 60.159 40.909 0.00 0.00 33.66 2.66
2056 4246 1.408702 ACACGCTTTGCCATTGAAAGT 59.591 42.857 0.00 0.00 33.66 2.66
2057 4247 1.788308 CACACGCTTTGCCATTGAAAG 59.212 47.619 0.00 0.00 34.16 2.62
2058 4248 1.406898 TCACACGCTTTGCCATTGAAA 59.593 42.857 0.00 0.00 0.00 2.69
2084 4274 1.376812 GGGCCTTACTTGTCACGGG 60.377 63.158 0.84 0.00 0.00 5.28
2085 4275 0.391263 GAGGGCCTTACTTGTCACGG 60.391 60.000 7.89 0.00 0.00 4.94
2086 4276 0.320374 TGAGGGCCTTACTTGTCACG 59.680 55.000 7.89 0.00 0.00 4.35
2119 4309 3.388345 TCCAACACACGCATTAGTACA 57.612 42.857 0.00 0.00 0.00 2.90
2163 4379 9.753674 AACTATTCATTCCAAAAGTATGAAGGA 57.246 29.630 0.00 0.00 43.09 3.36
2192 4408 5.221028 CCAGGCGATGAAAATTTACATAGCA 60.221 40.000 17.22 0.00 43.28 3.49
2207 4423 3.111853 TGCTTATAGTTCCAGGCGATG 57.888 47.619 0.00 0.00 0.00 3.84
2210 4426 2.838736 ACATGCTTATAGTTCCAGGCG 58.161 47.619 0.00 0.00 0.00 5.52
2220 4436 6.883744 TGTTCCACATCAGTACATGCTTATA 58.116 36.000 0.00 0.00 0.00 0.98
2222 4438 5.159273 TGTTCCACATCAGTACATGCTTA 57.841 39.130 0.00 0.00 0.00 3.09
2229 4445 4.945246 ACCGATATGTTCCACATCAGTAC 58.055 43.478 0.00 0.00 39.88 2.73
2243 4459 7.331934 ACGGATCAAATTAATCAGACCGATATG 59.668 37.037 22.50 0.00 40.78 1.78
2244 4460 7.386851 ACGGATCAAATTAATCAGACCGATAT 58.613 34.615 22.50 9.74 40.78 1.63
2248 4464 7.421530 AATACGGATCAAATTAATCAGACCG 57.578 36.000 18.38 18.38 42.78 4.79
2260 4476 4.095410 CTGCAAGCAAATACGGATCAAA 57.905 40.909 0.00 0.00 0.00 2.69
2311 4527 0.039527 GCTTTTCACCGACGGCATTT 60.040 50.000 15.39 0.00 0.00 2.32
2318 4534 1.333791 CCGTTCTTGCTTTTCACCGAC 60.334 52.381 0.00 0.00 0.00 4.79
2460 4676 8.991243 CTTCTCATGAAGGATGATATTCTCTC 57.009 38.462 0.00 0.00 44.33 3.20
2505 4721 6.551601 GGGAAGTCTAAATAGAGACCTCATCA 59.448 42.308 4.94 0.00 45.97 3.07
2527 4743 2.439507 CAAGAAGCTATAAGCCTGGGGA 59.560 50.000 0.00 0.00 43.77 4.81
2566 4786 6.258230 TCATTCAGGACAACTTATTTGCAG 57.742 37.500 0.00 0.00 39.01 4.41
2577 4797 7.936496 TGTTTATTGCTATCATTCAGGACAA 57.064 32.000 0.00 0.00 0.00 3.18
2608 4828 9.823647 TCAAAGTTATTTATTGCTGGTTCAAAA 57.176 25.926 0.00 0.00 0.00 2.44
2609 4829 9.823647 TTCAAAGTTATTTATTGCTGGTTCAAA 57.176 25.926 0.00 0.00 0.00 2.69
2610 4830 9.474920 CTTCAAAGTTATTTATTGCTGGTTCAA 57.525 29.630 0.00 0.00 0.00 2.69
2611 4831 7.598493 GCTTCAAAGTTATTTATTGCTGGTTCA 59.402 33.333 0.00 0.00 0.00 3.18
2612 4832 7.814587 AGCTTCAAAGTTATTTATTGCTGGTTC 59.185 33.333 0.00 0.00 30.35 3.62
2613 4833 7.599998 CAGCTTCAAAGTTATTTATTGCTGGTT 59.400 33.333 0.00 0.00 38.64 3.67
2614 4834 7.039784 TCAGCTTCAAAGTTATTTATTGCTGGT 60.040 33.333 0.00 0.00 40.43 4.00
2615 4835 7.315142 TCAGCTTCAAAGTTATTTATTGCTGG 58.685 34.615 0.00 0.00 40.43 4.85
2616 4836 8.025445 ACTCAGCTTCAAAGTTATTTATTGCTG 58.975 33.333 0.00 0.00 40.86 4.41
2617 4837 8.115490 ACTCAGCTTCAAAGTTATTTATTGCT 57.885 30.769 0.00 0.00 31.05 3.91
2618 4838 8.748380 AACTCAGCTTCAAAGTTATTTATTGC 57.252 30.769 0.00 0.00 31.68 3.56
2626 4846 9.424319 CATAGTTAGAACTCAGCTTCAAAGTTA 57.576 33.333 0.00 0.00 40.37 2.24
2645 4865 6.941857 TGGTACAATCAGACAAGCATAGTTA 58.058 36.000 0.00 0.00 31.92 2.24
2667 4887 1.619654 TGGCAGAACAGGTCAAATGG 58.380 50.000 0.00 0.00 0.00 3.16
2672 4892 3.153919 GGTAAAATGGCAGAACAGGTCA 58.846 45.455 0.00 0.00 0.00 4.02
2677 4897 6.065374 TCTTAACTGGTAAAATGGCAGAACA 58.935 36.000 0.00 0.00 0.00 3.18
2694 4915 5.435686 TGCACCATCTTACCATCTTAACT 57.564 39.130 0.00 0.00 0.00 2.24
2703 4924 5.640732 CATTTACACTTGCACCATCTTACC 58.359 41.667 0.00 0.00 0.00 2.85
2715 4936 6.304356 TGAGAAGACTTGCATTTACACTTG 57.696 37.500 0.00 0.00 0.00 3.16
2716 4937 6.488006 ACATGAGAAGACTTGCATTTACACTT 59.512 34.615 0.00 0.00 0.00 3.16
2717 4938 6.000219 ACATGAGAAGACTTGCATTTACACT 59.000 36.000 0.00 0.00 0.00 3.55
2718 4939 6.246420 ACATGAGAAGACTTGCATTTACAC 57.754 37.500 0.00 0.00 0.00 2.90
2719 4940 6.347644 CGAACATGAGAAGACTTGCATTTACA 60.348 38.462 0.00 0.00 0.00 2.41
2720 4941 6.017933 CGAACATGAGAAGACTTGCATTTAC 58.982 40.000 0.00 0.00 0.00 2.01
2761 4990 2.538333 GCGATAATGTTGCTGCAGTCAG 60.538 50.000 16.64 1.17 43.16 3.51
2762 4991 1.398041 GCGATAATGTTGCTGCAGTCA 59.602 47.619 16.64 11.11 34.16 3.41
2763 4992 1.268234 GGCGATAATGTTGCTGCAGTC 60.268 52.381 16.64 8.39 37.39 3.51
2764 4993 0.734889 GGCGATAATGTTGCTGCAGT 59.265 50.000 16.64 0.00 37.39 4.40
2765 4994 1.019673 AGGCGATAATGTTGCTGCAG 58.980 50.000 10.11 10.11 37.39 4.41
2851 5091 5.141182 CCTCTACTATAAGTGGCAAGGAGA 58.859 45.833 0.00 0.00 0.00 3.71
2864 5114 3.008813 CGCCCCACTCTACCTCTACTATA 59.991 52.174 0.00 0.00 0.00 1.31
2875 5125 2.589157 CCACAACCGCCCCACTCTA 61.589 63.158 0.00 0.00 0.00 2.43
2927 5177 4.286813 AAGATCTGAGATACCCCTTGGA 57.713 45.455 0.00 0.00 34.81 3.53
2943 5193 6.455360 TGCCCATCTTAACAATGAAAGATC 57.545 37.500 10.87 0.00 39.79 2.75
2945 5195 5.716228 ACATGCCCATCTTAACAATGAAAGA 59.284 36.000 0.00 5.56 36.24 2.52
3236 5488 7.171678 AGTTTCCTAATAATTAGATGCGTCTGC 59.828 37.037 18.98 0.00 37.21 4.26
3489 5741 2.511818 TGGTGACGACAGGTGACTT 58.488 52.632 0.00 0.00 40.21 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.