Multiple sequence alignment - TraesCS7A01G337200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G337200 chr7A 100.000 4896 0 0 1 4896 493111432 493116327 0.000000e+00 9042.0
1 TraesCS7A01G337200 chr7A 87.430 533 56 6 1010 1537 481569117 481569643 1.950000e-168 603.0
2 TraesCS7A01G337200 chr7A 82.590 471 77 4 2984 3451 481571390 481571858 1.270000e-110 411.0
3 TraesCS7A01G337200 chr7A 83.636 165 16 6 2217 2373 481570946 481571107 1.420000e-30 145.0
4 TraesCS7A01G337200 chr7D 90.972 2758 190 23 941 3675 442280361 442283082 0.000000e+00 3659.0
5 TraesCS7A01G337200 chr7D 93.274 788 42 6 1 782 304404727 304405509 0.000000e+00 1151.0
6 TraesCS7A01G337200 chr7D 91.897 580 32 1 3334 3913 442283440 442284004 0.000000e+00 797.0
7 TraesCS7A01G337200 chr7D 87.805 533 59 4 1010 1537 416946552 416947083 1.940000e-173 619.0
8 TraesCS7A01G337200 chr7D 83.439 471 73 4 2984 3451 416948814 416949282 2.710000e-117 433.0
9 TraesCS7A01G337200 chr7D 92.989 271 19 0 3331 3601 442282912 442283182 3.550000e-106 396.0
10 TraesCS7A01G337200 chr7D 87.725 334 20 9 4175 4491 442284241 442284570 2.150000e-98 370.0
11 TraesCS7A01G337200 chr7D 81.735 219 19 5 3962 4180 442284004 442284201 3.920000e-36 163.0
12 TraesCS7A01G337200 chr1D 95.944 789 21 6 1 783 340514522 340515305 0.000000e+00 1269.0
13 TraesCS7A01G337200 chr1D 94.697 792 30 7 1 786 391884863 391885648 0.000000e+00 1219.0
14 TraesCS7A01G337200 chr1D 77.399 792 118 32 3629 4396 172862960 172862206 9.800000e-112 414.0
15 TraesCS7A01G337200 chr1D 87.640 178 16 5 1880 2052 108261712 108261536 8.310000e-48 202.0
16 TraesCS7A01G337200 chr1A 95.536 784 30 4 1 782 70349354 70350134 0.000000e+00 1249.0
17 TraesCS7A01G337200 chr1A 99.210 633 3 2 150 782 165199874 165199244 0.000000e+00 1140.0
18 TraesCS7A01G337200 chr1A 97.484 159 4 0 1 159 165183510 165183668 6.240000e-69 272.0
19 TraesCS7A01G337200 chr5D 95.311 789 26 6 1 783 383171812 383171029 0.000000e+00 1242.0
20 TraesCS7A01G337200 chr2D 94.930 789 28 7 1 783 591036978 591036196 0.000000e+00 1225.0
21 TraesCS7A01G337200 chr2D 94.797 788 30 6 1 782 591049093 591049875 0.000000e+00 1218.0
22 TraesCS7A01G337200 chr2D 86.111 72 9 1 4640 4710 619626520 619626449 5.260000e-10 76.8
23 TraesCS7A01G337200 chr7B 91.751 788 45 9 1 782 114363818 114364591 0.000000e+00 1077.0
24 TraesCS7A01G337200 chr7B 85.596 604 71 10 949 1537 432900434 432901036 1.940000e-173 619.0
25 TraesCS7A01G337200 chr7B 88.000 400 44 2 3507 3903 458840493 458840891 2.060000e-128 470.0
26 TraesCS7A01G337200 chr7B 82.378 471 71 11 2984 3448 432905004 432905468 2.750000e-107 399.0
27 TraesCS7A01G337200 chr7B 90.511 274 23 2 1022 1292 458838183 458838456 4.660000e-95 359.0
28 TraesCS7A01G337200 chr6B 77.718 745 97 35 3629 4321 183306815 183307542 4.590000e-105 392.0
29 TraesCS7A01G337200 chrUn 76.015 813 128 37 3629 4396 71277216 71276426 4.660000e-95 359.0
30 TraesCS7A01G337200 chr6A 78.695 521 72 21 3629 4111 117349198 117349717 1.320000e-80 311.0
31 TraesCS7A01G337200 chr3D 90.123 162 14 2 1892 2051 315480423 315480584 4.970000e-50 209.0
32 TraesCS7A01G337200 chr3D 90.506 158 15 0 1890 2047 322435288 322435445 4.970000e-50 209.0
33 TraesCS7A01G337200 chr3D 90.000 160 15 1 1893 2052 375193758 375193916 6.420000e-49 206.0
34 TraesCS7A01G337200 chr3B 90.506 158 15 0 1890 2047 396271875 396272032 4.970000e-50 209.0
35 TraesCS7A01G337200 chr4D 89.634 164 16 1 1881 2043 74079338 74079501 1.790000e-49 207.0
36 TraesCS7A01G337200 chr3A 90.000 160 15 1 1893 2052 498229934 498230092 6.420000e-49 206.0
37 TraesCS7A01G337200 chr3A 84.354 147 21 2 4677 4821 714605589 714605443 5.110000e-30 143.0
38 TraesCS7A01G337200 chr2B 88.757 169 18 1 1889 2057 403702438 403702271 6.420000e-49 206.0
39 TraesCS7A01G337200 chr1B 95.833 48 0 2 4666 4711 581702036 581701989 5.260000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G337200 chr7A 493111432 493116327 4895 False 9042.000000 9042 100.0000 1 4896 1 chr7A.!!$F1 4895
1 TraesCS7A01G337200 chr7A 481569117 481571858 2741 False 386.333333 603 84.5520 1010 3451 3 chr7A.!!$F2 2441
2 TraesCS7A01G337200 chr7D 304404727 304405509 782 False 1151.000000 1151 93.2740 1 782 1 chr7D.!!$F1 781
3 TraesCS7A01G337200 chr7D 442280361 442284570 4209 False 1077.000000 3659 89.0636 941 4491 5 chr7D.!!$F3 3550
4 TraesCS7A01G337200 chr7D 416946552 416949282 2730 False 526.000000 619 85.6220 1010 3451 2 chr7D.!!$F2 2441
5 TraesCS7A01G337200 chr1D 340514522 340515305 783 False 1269.000000 1269 95.9440 1 783 1 chr1D.!!$F1 782
6 TraesCS7A01G337200 chr1D 391884863 391885648 785 False 1219.000000 1219 94.6970 1 786 1 chr1D.!!$F2 785
7 TraesCS7A01G337200 chr1D 172862206 172862960 754 True 414.000000 414 77.3990 3629 4396 1 chr1D.!!$R2 767
8 TraesCS7A01G337200 chr1A 70349354 70350134 780 False 1249.000000 1249 95.5360 1 782 1 chr1A.!!$F1 781
9 TraesCS7A01G337200 chr1A 165199244 165199874 630 True 1140.000000 1140 99.2100 150 782 1 chr1A.!!$R1 632
10 TraesCS7A01G337200 chr5D 383171029 383171812 783 True 1242.000000 1242 95.3110 1 783 1 chr5D.!!$R1 782
11 TraesCS7A01G337200 chr2D 591036196 591036978 782 True 1225.000000 1225 94.9300 1 783 1 chr2D.!!$R1 782
12 TraesCS7A01G337200 chr2D 591049093 591049875 782 False 1218.000000 1218 94.7970 1 782 1 chr2D.!!$F1 781
13 TraesCS7A01G337200 chr7B 114363818 114364591 773 False 1077.000000 1077 91.7510 1 782 1 chr7B.!!$F1 781
14 TraesCS7A01G337200 chr7B 432900434 432905468 5034 False 509.000000 619 83.9870 949 3448 2 chr7B.!!$F2 2499
15 TraesCS7A01G337200 chr7B 458838183 458840891 2708 False 414.500000 470 89.2555 1022 3903 2 chr7B.!!$F3 2881
16 TraesCS7A01G337200 chr6B 183306815 183307542 727 False 392.000000 392 77.7180 3629 4321 1 chr6B.!!$F1 692
17 TraesCS7A01G337200 chrUn 71276426 71277216 790 True 359.000000 359 76.0150 3629 4396 1 chrUn.!!$R1 767
18 TraesCS7A01G337200 chr6A 117349198 117349717 519 False 311.000000 311 78.6950 3629 4111 1 chr6A.!!$F1 482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
986 1005 1.612442 AGCTCCTAGGGTTTCGCCA 60.612 57.895 9.46 0.0 39.65 5.69 F
1750 2137 0.037326 TTCATCTGTGTCGAGGCACC 60.037 55.000 5.32 0.0 38.52 5.01 F
2754 6288 0.239879 TTTTCGTGGAATGAAGCGCC 59.760 50.000 2.29 0.0 43.75 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2896 6430 0.250038 ATCGGCATGATTCCTGGTCG 60.250 55.0 0.00 0.00 31.57 4.79 R
2906 6440 0.322366 TTGTGGCAGAATCGGCATGA 60.322 50.0 7.78 0.00 44.06 3.07 R
4625 9088 0.036483 ATACACGTGTGCAGGCATCA 60.036 50.0 30.83 8.02 0.00 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
382 383 2.591923 CCGAGATGAGATCAGGAGGAA 58.408 52.381 0.00 0.00 33.10 3.36
611 630 6.685403 CACTTAAAAGATTTTACGCGGGTATG 59.315 38.462 13.56 0.22 32.77 2.39
783 802 2.551071 GGTACCCATTGCCATCTCTAGC 60.551 54.545 0.00 0.00 0.00 3.42
785 804 1.849039 ACCCATTGCCATCTCTAGCTT 59.151 47.619 0.00 0.00 0.00 3.74
786 805 2.243221 ACCCATTGCCATCTCTAGCTTT 59.757 45.455 0.00 0.00 0.00 3.51
787 806 2.621998 CCCATTGCCATCTCTAGCTTTG 59.378 50.000 0.00 0.00 0.00 2.77
788 807 3.548770 CCATTGCCATCTCTAGCTTTGA 58.451 45.455 0.00 0.00 0.00 2.69
789 808 3.949754 CCATTGCCATCTCTAGCTTTGAA 59.050 43.478 0.00 0.00 0.00 2.69
790 809 4.036498 CCATTGCCATCTCTAGCTTTGAAG 59.964 45.833 0.00 0.00 0.00 3.02
791 810 4.558226 TTGCCATCTCTAGCTTTGAAGA 57.442 40.909 0.00 0.00 0.00 2.87
792 811 4.767578 TGCCATCTCTAGCTTTGAAGAT 57.232 40.909 0.00 0.00 0.00 2.40
793 812 4.449131 TGCCATCTCTAGCTTTGAAGATG 58.551 43.478 15.17 15.17 34.61 2.90
794 813 4.080695 TGCCATCTCTAGCTTTGAAGATGT 60.081 41.667 18.25 0.00 33.42 3.06
795 814 4.880696 GCCATCTCTAGCTTTGAAGATGTT 59.119 41.667 18.25 0.00 33.42 2.71
796 815 5.356470 GCCATCTCTAGCTTTGAAGATGTTT 59.644 40.000 18.25 0.00 33.42 2.83
797 816 6.677431 GCCATCTCTAGCTTTGAAGATGTTTG 60.677 42.308 18.25 9.84 33.42 2.93
798 817 5.869753 TCTCTAGCTTTGAAGATGTTTGC 57.130 39.130 0.00 0.00 0.00 3.68
799 818 5.555017 TCTCTAGCTTTGAAGATGTTTGCT 58.445 37.500 0.00 0.00 0.00 3.91
800 819 5.410746 TCTCTAGCTTTGAAGATGTTTGCTG 59.589 40.000 0.00 0.00 0.00 4.41
801 820 3.655276 AGCTTTGAAGATGTTTGCTGG 57.345 42.857 0.00 0.00 0.00 4.85
802 821 2.961062 AGCTTTGAAGATGTTTGCTGGT 59.039 40.909 0.00 0.00 0.00 4.00
803 822 4.144297 AGCTTTGAAGATGTTTGCTGGTA 58.856 39.130 0.00 0.00 0.00 3.25
804 823 4.217118 AGCTTTGAAGATGTTTGCTGGTAG 59.783 41.667 0.00 0.00 0.00 3.18
805 824 4.479619 CTTTGAAGATGTTTGCTGGTAGC 58.520 43.478 0.00 0.00 42.82 3.58
806 825 2.436417 TGAAGATGTTTGCTGGTAGCC 58.564 47.619 0.00 0.00 41.51 3.93
807 826 2.040278 TGAAGATGTTTGCTGGTAGCCT 59.960 45.455 0.00 0.00 41.51 4.58
808 827 3.263170 TGAAGATGTTTGCTGGTAGCCTA 59.737 43.478 0.00 0.00 41.51 3.93
809 828 4.261801 GAAGATGTTTGCTGGTAGCCTAA 58.738 43.478 0.00 0.00 41.51 2.69
810 829 4.301072 AGATGTTTGCTGGTAGCCTAAA 57.699 40.909 0.00 0.00 41.51 1.85
811 830 4.010349 AGATGTTTGCTGGTAGCCTAAAC 58.990 43.478 8.82 8.82 41.51 2.01
812 831 3.216187 TGTTTGCTGGTAGCCTAAACA 57.784 42.857 12.54 12.54 41.64 2.83
813 832 2.882137 TGTTTGCTGGTAGCCTAAACAC 59.118 45.455 12.54 0.00 40.13 3.32
814 833 3.146847 GTTTGCTGGTAGCCTAAACACT 58.853 45.455 10.19 0.00 41.51 3.55
815 834 4.202377 TGTTTGCTGGTAGCCTAAACACTA 60.202 41.667 12.54 0.00 40.13 2.74
816 835 4.837093 TTGCTGGTAGCCTAAACACTAT 57.163 40.909 0.00 0.00 41.51 2.12
817 836 4.402056 TGCTGGTAGCCTAAACACTATC 57.598 45.455 0.00 0.00 41.51 2.08
818 837 4.030913 TGCTGGTAGCCTAAACACTATCT 58.969 43.478 0.00 0.00 41.51 1.98
819 838 4.141937 TGCTGGTAGCCTAAACACTATCTG 60.142 45.833 0.00 0.00 41.51 2.90
820 839 4.099573 GCTGGTAGCCTAAACACTATCTGA 59.900 45.833 0.00 0.00 34.48 3.27
821 840 5.593010 CTGGTAGCCTAAACACTATCTGAC 58.407 45.833 0.00 0.00 0.00 3.51
822 841 5.020795 TGGTAGCCTAAACACTATCTGACA 58.979 41.667 0.00 0.00 0.00 3.58
823 842 5.661312 TGGTAGCCTAAACACTATCTGACAT 59.339 40.000 0.00 0.00 0.00 3.06
824 843 6.156256 TGGTAGCCTAAACACTATCTGACATT 59.844 38.462 0.00 0.00 0.00 2.71
825 844 6.702282 GGTAGCCTAAACACTATCTGACATTC 59.298 42.308 0.00 0.00 0.00 2.67
826 845 5.352284 AGCCTAAACACTATCTGACATTCG 58.648 41.667 0.00 0.00 0.00 3.34
827 846 5.105310 AGCCTAAACACTATCTGACATTCGT 60.105 40.000 0.00 0.00 0.00 3.85
828 847 5.232414 GCCTAAACACTATCTGACATTCGTC 59.768 44.000 0.00 0.00 42.93 4.20
889 908 9.621239 TGTTATCTCTAGAATATCATTTCCCCT 57.379 33.333 0.00 0.00 0.00 4.79
892 911 7.560796 TCTCTAGAATATCATTTCCCCTTCC 57.439 40.000 0.00 0.00 0.00 3.46
893 912 6.502158 TCTCTAGAATATCATTTCCCCTTCCC 59.498 42.308 0.00 0.00 0.00 3.97
894 913 6.402442 TCTAGAATATCATTTCCCCTTCCCT 58.598 40.000 0.00 0.00 0.00 4.20
895 914 7.553655 TCTAGAATATCATTTCCCCTTCCCTA 58.446 38.462 0.00 0.00 0.00 3.53
896 915 8.022666 TCTAGAATATCATTTCCCCTTCCCTAA 58.977 37.037 0.00 0.00 0.00 2.69
897 916 7.480222 AGAATATCATTTCCCCTTCCCTAAA 57.520 36.000 0.00 0.00 0.00 1.85
898 917 7.893482 AGAATATCATTTCCCCTTCCCTAAAA 58.107 34.615 0.00 0.00 0.00 1.52
899 918 8.351414 AGAATATCATTTCCCCTTCCCTAAAAA 58.649 33.333 0.00 0.00 0.00 1.94
986 1005 1.612442 AGCTCCTAGGGTTTCGCCA 60.612 57.895 9.46 0.00 39.65 5.69
1126 1183 1.541588 GAGGCAACAAATGGACCAGAC 59.458 52.381 0.00 0.00 41.41 3.51
1262 1324 0.254107 TAGCCAATTCCCTCCCCCTT 60.254 55.000 0.00 0.00 0.00 3.95
1334 1399 2.289320 ACTGACCATGTGCTTCAGTCTC 60.289 50.000 9.53 0.00 45.49 3.36
1335 1400 1.002430 TGACCATGTGCTTCAGTCTCC 59.998 52.381 0.00 0.00 0.00 3.71
1349 1414 1.065418 AGTCTCCGGGGTTAATGCTTG 60.065 52.381 0.00 0.00 0.00 4.01
1435 1599 1.416401 TCTCTTCTTCGGCACCAAAGT 59.584 47.619 0.00 0.00 0.00 2.66
1505 1884 6.027749 CGCCATGTTTAACAGAATTCTAACC 58.972 40.000 7.86 0.00 0.00 2.85
1532 1911 6.042552 CCAGTTCTACCATGGATGACTTATCT 59.957 42.308 21.47 2.03 36.09 1.98
1547 1926 7.889589 TGACTTATCTGATACATAAATGCCG 57.110 36.000 0.00 0.00 0.00 5.69
1575 1954 3.065786 CGCCACACTCTTGATAAATGCAT 59.934 43.478 0.00 0.00 0.00 3.96
1585 1964 9.570468 ACTCTTGATAAATGCATCACTTCATAT 57.430 29.630 0.00 0.00 34.69 1.78
1597 1976 6.673796 GCATCACTTCATATTTGCCTTTTTGC 60.674 38.462 0.00 0.00 0.00 3.68
1723 2110 6.279813 TCCCCAAATTATTGCCTCTAATCT 57.720 37.500 0.00 0.00 35.10 2.40
1750 2137 0.037326 TTCATCTGTGTCGAGGCACC 60.037 55.000 5.32 0.00 38.52 5.01
1775 2162 4.501229 CCACGTGTGGGTAAGTAGTTACAA 60.501 45.833 19.61 6.84 46.81 2.41
1819 2206 6.835819 ACACAAGTACTCTGTCTGCTATAA 57.164 37.500 0.00 0.00 0.00 0.98
1915 2304 3.305720 ACTCCCTCCGCTCACAAATATA 58.694 45.455 0.00 0.00 0.00 0.86
1954 2343 4.879197 TCTGAATCGGATGCATGTAGAT 57.121 40.909 2.46 2.93 0.00 1.98
1969 2358 5.121768 GCATGTAGATCCGTTTTAGTGTGTT 59.878 40.000 0.00 0.00 0.00 3.32
1991 2380 3.130633 TGTTCACTCATTTCAGTCCGTG 58.869 45.455 0.00 0.00 0.00 4.94
1998 2387 3.909430 TCATTTCAGTCCGTGTGTAGTC 58.091 45.455 0.00 0.00 0.00 2.59
2052 2441 7.921786 TTGTGAACAGAGGGAATACTATTTG 57.078 36.000 0.00 0.00 0.00 2.32
2152 2562 8.636213 CATTCTTCCTATGTTATTTTGCCTGAT 58.364 33.333 0.00 0.00 0.00 2.90
2155 2565 7.833682 TCTTCCTATGTTATTTTGCCTGATTGA 59.166 33.333 0.00 0.00 0.00 2.57
2188 2598 0.617249 TTTGGGATTGGGTGGGCATC 60.617 55.000 0.00 0.00 0.00 3.91
2191 2601 0.398948 GGGATTGGGTGGGCATCAAT 60.399 55.000 0.00 0.00 34.27 2.57
2194 2604 2.629617 GGATTGGGTGGGCATCAATTAG 59.370 50.000 0.00 0.00 32.05 1.73
2257 5546 9.853555 CATATTATGGTGCAAAAGTTTAAGTCA 57.146 29.630 0.00 0.00 0.00 3.41
2274 5564 3.825328 AGTCATGTGATTATTGGCTCCC 58.175 45.455 0.00 0.00 0.00 4.30
2292 5582 4.043435 GCTCCCCCAATGATCTAAGGTTAT 59.957 45.833 0.00 0.00 0.00 1.89
2467 5769 8.421673 AAATAGTAGGCTTTTCGACTATTCAC 57.578 34.615 16.13 0.00 41.39 3.18
2470 5772 6.407202 AGTAGGCTTTTCGACTATTCACAAT 58.593 36.000 0.00 0.00 35.19 2.71
2483 5785 6.640518 ACTATTCACAATTACTCGTGACCAT 58.359 36.000 0.00 0.00 41.67 3.55
2505 5807 7.710896 CCATTCCTATGGTCTTTCATTTTCTC 58.289 38.462 0.00 0.00 45.34 2.87
2510 5812 6.541641 CCTATGGTCTTTCATTTTCTCTCAGG 59.458 42.308 0.00 0.00 0.00 3.86
2574 5877 0.321919 TGCAGCAAACTGGCCTAGAG 60.322 55.000 3.32 0.00 44.63 2.43
2688 6222 6.653320 CGGTTGATTTAGCTTATAAGGCCATA 59.347 38.462 14.28 0.00 0.00 2.74
2694 6228 9.413734 GATTTAGCTTATAAGGCCATATCCAAT 57.586 33.333 14.28 0.00 0.00 3.16
2703 6237 1.601162 GCCATATCCAATGCAGCAACG 60.601 52.381 0.00 0.00 0.00 4.10
2714 6248 3.740044 TGCAGCAACGCTTAATTAGAC 57.260 42.857 0.00 0.00 36.40 2.59
2727 6261 5.276726 GCTTAATTAGACGCTTACGGAAAGG 60.277 44.000 2.48 0.00 46.04 3.11
2752 6286 4.335082 TGTATTTTCGTGGAATGAAGCG 57.665 40.909 0.00 0.00 43.75 4.68
2753 6287 2.262572 ATTTTCGTGGAATGAAGCGC 57.737 45.000 0.00 0.00 43.75 5.92
2754 6288 0.239879 TTTTCGTGGAATGAAGCGCC 59.760 50.000 2.29 0.00 43.75 6.53
2755 6289 1.906994 TTTCGTGGAATGAAGCGCCG 61.907 55.000 2.29 0.00 43.75 6.46
2756 6290 2.773397 TTCGTGGAATGAAGCGCCGA 62.773 55.000 2.29 0.00 36.82 5.54
2757 6291 2.785258 GTGGAATGAAGCGCCGAC 59.215 61.111 2.29 0.00 0.00 4.79
2758 6292 1.741770 GTGGAATGAAGCGCCGACT 60.742 57.895 2.29 0.00 0.00 4.18
2759 6293 1.003839 TGGAATGAAGCGCCGACTT 60.004 52.632 2.29 0.00 0.00 3.01
2760 6294 0.248012 TGGAATGAAGCGCCGACTTA 59.752 50.000 2.29 0.00 0.00 2.24
2761 6295 1.134521 TGGAATGAAGCGCCGACTTAT 60.135 47.619 2.29 0.00 0.00 1.73
2762 6296 1.261619 GGAATGAAGCGCCGACTTATG 59.738 52.381 2.29 0.00 0.00 1.90
2763 6297 2.201732 GAATGAAGCGCCGACTTATGA 58.798 47.619 2.29 0.00 0.00 2.15
2764 6298 2.309528 ATGAAGCGCCGACTTATGAA 57.690 45.000 2.29 0.00 0.00 2.57
2782 6316 2.025037 TGAACCTAGCCTCCAATGCATT 60.025 45.455 5.99 5.99 0.00 3.56
2786 6320 1.607628 CTAGCCTCCAATGCATTGAGC 59.392 52.381 35.47 30.91 45.96 4.26
2798 6332 1.733912 GCATTGAGCGATTGTGAGACA 59.266 47.619 0.00 0.00 0.00 3.41
2810 6344 7.067129 AGCGATTGTGAGACACTTAGATAGTTA 59.933 37.037 0.00 0.00 33.85 2.24
2859 6393 2.038269 GCACAGGATTCGGCCGAAA 61.038 57.895 41.31 25.77 37.69 3.46
2863 6397 3.872728 GGATTCGGCCGAAACGCC 61.873 66.667 41.31 34.52 46.13 5.68
2869 6403 4.794439 GGCCGAAACGCCCAATGC 62.794 66.667 0.00 0.00 43.66 3.56
2870 6404 4.049640 GCCGAAACGCCCAATGCA 62.050 61.111 0.00 0.00 41.33 3.96
2872 6406 1.215117 CCGAAACGCCCAATGCAAT 59.785 52.632 0.00 0.00 41.33 3.56
2877 6411 2.652941 AACGCCCAATGCAATGTTAG 57.347 45.000 0.21 0.00 41.33 2.34
2895 6429 4.018870 TGTTAGGCATTGACACAAGGGATA 60.019 41.667 0.00 0.00 0.00 2.59
2896 6430 3.004752 AGGCATTGACACAAGGGATAC 57.995 47.619 0.00 0.00 0.00 2.24
2906 6440 2.170607 CACAAGGGATACGACCAGGAAT 59.829 50.000 0.00 0.00 37.60 3.01
2923 6457 1.027357 AATCATGCCGATTCTGCCAC 58.973 50.000 0.00 0.00 40.48 5.01
2966 6500 2.125106 CCTACCACAAGCGCCTCC 60.125 66.667 2.29 0.00 0.00 4.30
2986 6520 2.487934 CGTTGGAGATGATGGCCTAAG 58.512 52.381 3.32 0.00 0.00 2.18
2989 6523 2.492025 TGGAGATGATGGCCTAAGGTT 58.508 47.619 3.32 0.00 0.00 3.50
3000 6534 2.358582 GGCCTAAGGTTCTCTCTACGTC 59.641 54.545 0.00 0.00 0.00 4.34
3217 6753 3.313249 TGCATGATCTCTTGCCATTTACG 59.687 43.478 13.54 0.00 43.75 3.18
3228 6764 2.238646 TGCCATTTACGGAAGAGGTGAT 59.761 45.455 2.58 0.00 0.00 3.06
3245 6781 5.030147 AGGTGATGAGTGACCTGGTAAATA 58.970 41.667 0.00 0.00 40.73 1.40
3261 6797 6.460781 TGGTAAATAAAGCTCGAGAGAAACA 58.539 36.000 18.75 0.00 41.32 2.83
3270 6806 2.924290 CTCGAGAGAAACAATTCCCGAC 59.076 50.000 6.58 0.00 41.32 4.79
3315 6851 0.912486 GCCTTGGTGGAGGTACAGAT 59.088 55.000 0.00 0.00 39.11 2.90
3322 6858 1.413077 GTGGAGGTACAGATGGCCTAC 59.587 57.143 3.32 0.00 33.87 3.18
3385 6921 2.885266 TCCTAATCGAACTCCTGATCCG 59.115 50.000 0.00 0.00 0.00 4.18
3401 7111 5.414454 CCTGATCCGATTGAAAAACCTACAA 59.586 40.000 0.00 0.00 0.00 2.41
3438 7148 3.002583 TGCTGATGGCGGGACTCA 61.003 61.111 0.00 0.00 45.43 3.41
3477 7187 2.858644 TGATTTCCATGGGAGGTACCT 58.141 47.619 16.26 16.26 38.98 3.08
3526 7746 3.191162 TCCCAAAATCATCTGAAACTGCG 59.809 43.478 0.00 0.00 0.00 5.18
3558 7778 2.224137 TGCATGATCGAACTCCTGATCC 60.224 50.000 0.00 0.00 40.19 3.36
3561 7781 1.676529 TGATCGAACTCCTGATCCGAC 59.323 52.381 0.00 0.00 40.19 4.79
3574 7794 3.581755 TGATCCGACTGAAAAACCTACG 58.418 45.455 0.00 0.00 0.00 3.51
3607 7950 1.604593 GCAACCTGCTGATGGTGGT 60.605 57.895 0.00 0.00 40.96 4.16
3626 7969 4.036380 GTGGTACTCCAAAACTGGAACAAG 59.964 45.833 0.00 0.00 46.15 3.16
3642 7985 2.662866 ACAAGCTGATGATTCCCATGG 58.337 47.619 4.14 4.14 35.17 3.66
3814 8164 0.834612 TCTTCACCGACAACAAGGGT 59.165 50.000 0.00 0.00 33.37 4.34
3820 8170 0.725117 CCGACAACAAGGGTAATCGC 59.275 55.000 0.00 0.00 34.74 4.58
3874 8224 0.681243 GGCTTGGCTGGGTAAGAAGG 60.681 60.000 0.00 0.00 0.00 3.46
3887 8237 5.472137 TGGGTAAGAAGGAAAATTCAGAACG 59.528 40.000 0.00 0.00 0.00 3.95
3891 8241 3.753797 AGAAGGAAAATTCAGAACGCCTC 59.246 43.478 0.00 0.00 0.00 4.70
3892 8242 3.140325 AGGAAAATTCAGAACGCCTCA 57.860 42.857 0.00 0.00 0.00 3.86
3918 8268 1.077005 TGGCTATGGAAATATGCCCCC 59.923 52.381 0.00 0.00 42.62 5.40
3927 8277 2.212752 AATATGCCCCCTGGAGAAGA 57.787 50.000 0.00 0.00 0.00 2.87
3929 8279 0.694444 TATGCCCCCTGGAGAAGACC 60.694 60.000 0.00 0.00 0.00 3.85
3939 8312 3.691609 CCTGGAGAAGACCTTTTGTATGC 59.308 47.826 0.00 0.00 0.00 3.14
3940 8313 3.334691 TGGAGAAGACCTTTTGTATGCG 58.665 45.455 0.00 0.00 0.00 4.73
3944 8317 3.751698 AGAAGACCTTTTGTATGCGGTTC 59.248 43.478 0.00 0.00 0.00 3.62
3945 8318 3.418684 AGACCTTTTGTATGCGGTTCT 57.581 42.857 0.00 0.00 0.00 3.01
3948 8321 4.222145 AGACCTTTTGTATGCGGTTCTAGA 59.778 41.667 0.00 0.00 0.00 2.43
3956 8329 2.148916 TGCGGTTCTAGACACTTGTG 57.851 50.000 0.00 0.00 0.00 3.33
3979 8353 6.747280 GTGGTGCTAAACTAATGCAATGTTAG 59.253 38.462 4.38 4.38 38.50 2.34
3993 8375 6.851609 TGCAATGTTAGTGGTAGCAAATTAG 58.148 36.000 0.00 0.00 0.00 1.73
3997 8379 6.677781 TGTTAGTGGTAGCAAATTAGCATC 57.322 37.500 0.00 0.00 34.02 3.91
3998 8380 6.414732 TGTTAGTGGTAGCAAATTAGCATCT 58.585 36.000 0.00 0.00 34.02 2.90
4021 8403 2.500504 AGTGCTAAGGTGTAGGGCTAAC 59.499 50.000 0.00 0.00 0.00 2.34
4036 8430 5.871834 AGGGCTAACTTTTGTGTGTATGTA 58.128 37.500 0.00 0.00 0.00 2.29
4074 8468 6.309494 TGTGCTAGTACTAACGCAATGTTAAG 59.691 38.462 15.39 0.00 42.31 1.85
4077 8471 6.237755 GCTAGTACTAACGCAATGTTAAGTGG 60.238 42.308 3.76 0.00 42.31 4.00
4103 8497 7.148590 GCGCTTGATCACAAATCCTTTTAATTT 60.149 33.333 0.00 0.00 35.49 1.82
4136 8530 5.633830 AACTAGTTGCATCATGAACCAAG 57.366 39.130 7.48 0.00 0.00 3.61
4137 8531 3.441572 ACTAGTTGCATCATGAACCAAGC 59.558 43.478 0.00 0.00 0.00 4.01
4143 8537 2.730090 GCATCATGAACCAAGCTGTTCG 60.730 50.000 0.00 0.58 46.04 3.95
4145 8539 2.416747 TCATGAACCAAGCTGTTCGAG 58.583 47.619 11.16 7.09 46.04 4.04
4185 8622 3.771160 CCTTGCGACGTAGCCCCT 61.771 66.667 18.26 0.00 36.02 4.79
4209 8646 0.742505 CCATGGCATCTCGCATGTTT 59.257 50.000 0.00 0.00 45.17 2.83
4353 8801 3.007614 ACTTGTCACCATTAAGTAGCCGT 59.992 43.478 0.00 0.00 33.22 5.68
4354 8802 4.221262 ACTTGTCACCATTAAGTAGCCGTA 59.779 41.667 0.00 0.00 33.22 4.02
4401 8849 5.091261 AGCCGTAGAGATGTCAATTCTTT 57.909 39.130 0.00 0.00 0.00 2.52
4434 8886 1.271656 CTTTTGCTGGGCTCTTCTTGG 59.728 52.381 0.00 0.00 0.00 3.61
4443 8895 3.765511 TGGGCTCTTCTTGGAAATGAATG 59.234 43.478 0.00 0.00 0.00 2.67
4444 8896 4.019174 GGGCTCTTCTTGGAAATGAATGA 58.981 43.478 0.00 0.00 0.00 2.57
4445 8897 4.097589 GGGCTCTTCTTGGAAATGAATGAG 59.902 45.833 0.00 0.00 0.00 2.90
4446 8898 4.439837 GGCTCTTCTTGGAAATGAATGAGC 60.440 45.833 0.00 0.00 39.61 4.26
4448 8900 5.336213 GCTCTTCTTGGAAATGAATGAGCAA 60.336 40.000 0.00 0.00 39.82 3.91
4449 8901 6.263516 TCTTCTTGGAAATGAATGAGCAAG 57.736 37.500 0.00 0.00 0.00 4.01
4451 8903 4.665451 TCTTGGAAATGAATGAGCAAGGA 58.335 39.130 0.00 0.00 0.00 3.36
4452 8904 5.078949 TCTTGGAAATGAATGAGCAAGGAA 58.921 37.500 0.00 0.00 0.00 3.36
4453 8905 5.718130 TCTTGGAAATGAATGAGCAAGGAAT 59.282 36.000 0.00 0.00 0.00 3.01
4454 8906 6.211986 TCTTGGAAATGAATGAGCAAGGAATT 59.788 34.615 0.00 0.00 0.00 2.17
4462 8925 1.339055 TGAGCAAGGAATTGAGGTCCG 60.339 52.381 0.00 0.00 40.36 4.79
4470 8933 1.734465 GAATTGAGGTCCGTTGCAGAG 59.266 52.381 0.00 0.00 0.00 3.35
4474 8937 3.414700 GGTCCGTTGCAGAGCACG 61.415 66.667 1.66 1.66 38.71 5.34
4482 8945 1.229975 TTGCAGAGCACGTCCACATG 61.230 55.000 0.00 0.00 38.71 3.21
4486 8949 2.481276 GCAGAGCACGTCCACATGTATA 60.481 50.000 0.00 0.00 0.00 1.47
4491 8954 7.484140 CAGAGCACGTCCACATGTATATATAT 58.516 38.462 0.00 0.00 0.00 0.86
4492 8955 8.621286 CAGAGCACGTCCACATGTATATATATA 58.379 37.037 0.00 0.00 0.00 0.86
4493 8956 9.355916 AGAGCACGTCCACATGTATATATATAT 57.644 33.333 10.10 10.10 0.00 0.86
4494 8957 9.967346 GAGCACGTCCACATGTATATATATATT 57.033 33.333 10.48 0.00 0.00 1.28
4495 8958 9.967346 AGCACGTCCACATGTATATATATATTC 57.033 33.333 10.48 6.49 0.00 1.75
4496 8959 9.967346 GCACGTCCACATGTATATATATATTCT 57.033 33.333 10.48 0.00 0.00 2.40
4551 9014 8.538409 TCTAACTAGAAAAATGTAACGTTCCC 57.462 34.615 2.82 0.00 0.00 3.97
4552 9015 8.370182 TCTAACTAGAAAAATGTAACGTTCCCT 58.630 33.333 2.82 0.00 0.00 4.20
4553 9016 9.643693 CTAACTAGAAAAATGTAACGTTCCCTA 57.356 33.333 2.82 0.00 0.00 3.53
4554 9017 8.907222 AACTAGAAAAATGTAACGTTCCCTAA 57.093 30.769 2.82 0.00 0.00 2.69
4555 9018 9.511272 AACTAGAAAAATGTAACGTTCCCTAAT 57.489 29.630 2.82 0.00 0.00 1.73
4558 9021 7.967178 AGAAAAATGTAACGTTCCCTAATACG 58.033 34.615 2.82 0.00 43.08 3.06
4559 9022 5.723492 AAATGTAACGTTCCCTAATACGC 57.277 39.130 2.82 0.00 41.24 4.42
4560 9023 4.660789 ATGTAACGTTCCCTAATACGCT 57.339 40.909 2.82 0.00 41.24 5.07
4561 9024 4.454728 TGTAACGTTCCCTAATACGCTT 57.545 40.909 2.82 0.00 41.24 4.68
4562 9025 4.423732 TGTAACGTTCCCTAATACGCTTC 58.576 43.478 2.82 0.00 41.24 3.86
4563 9026 3.881937 AACGTTCCCTAATACGCTTCT 57.118 42.857 0.00 0.00 41.24 2.85
4564 9027 3.881937 ACGTTCCCTAATACGCTTCTT 57.118 42.857 0.00 0.00 41.24 2.52
4565 9028 3.778618 ACGTTCCCTAATACGCTTCTTC 58.221 45.455 0.00 0.00 41.24 2.87
4566 9029 3.446516 ACGTTCCCTAATACGCTTCTTCT 59.553 43.478 0.00 0.00 41.24 2.85
4567 9030 4.081807 ACGTTCCCTAATACGCTTCTTCTT 60.082 41.667 0.00 0.00 41.24 2.52
4568 9031 4.868734 CGTTCCCTAATACGCTTCTTCTTT 59.131 41.667 0.00 0.00 0.00 2.52
4569 9032 5.005490 CGTTCCCTAATACGCTTCTTCTTTC 59.995 44.000 0.00 0.00 0.00 2.62
4570 9033 4.679662 TCCCTAATACGCTTCTTCTTTCG 58.320 43.478 0.00 0.00 0.00 3.46
4571 9034 4.159135 TCCCTAATACGCTTCTTCTTTCGT 59.841 41.667 0.00 0.00 38.75 3.85
4572 9035 4.503370 CCCTAATACGCTTCTTCTTTCGTC 59.497 45.833 0.00 0.00 36.50 4.20
4573 9036 5.100259 CCTAATACGCTTCTTCTTTCGTCA 58.900 41.667 0.00 0.00 36.50 4.35
4574 9037 5.575606 CCTAATACGCTTCTTCTTTCGTCAA 59.424 40.000 0.00 0.00 36.50 3.18
4575 9038 5.517037 AATACGCTTCTTCTTTCGTCAAG 57.483 39.130 0.00 0.00 36.50 3.02
4576 9039 1.527311 ACGCTTCTTCTTTCGTCAAGC 59.473 47.619 0.00 0.00 36.84 4.01
4577 9040 1.136224 CGCTTCTTCTTTCGTCAAGCC 60.136 52.381 0.00 0.00 36.86 4.35
4578 9041 1.136224 GCTTCTTCTTTCGTCAAGCCG 60.136 52.381 0.00 0.00 34.59 5.52
4579 9042 2.135933 CTTCTTCTTTCGTCAAGCCGT 58.864 47.619 0.00 0.00 31.70 5.68
4580 9043 1.779569 TCTTCTTTCGTCAAGCCGTC 58.220 50.000 0.00 0.00 31.70 4.79
4581 9044 0.790814 CTTCTTTCGTCAAGCCGTCC 59.209 55.000 0.00 0.00 31.70 4.79
4582 9045 0.391597 TTCTTTCGTCAAGCCGTCCT 59.608 50.000 0.00 0.00 31.70 3.85
4583 9046 0.391597 TCTTTCGTCAAGCCGTCCTT 59.608 50.000 0.00 0.00 31.70 3.36
4584 9047 1.614903 TCTTTCGTCAAGCCGTCCTTA 59.385 47.619 0.00 0.00 31.70 2.69
4585 9048 1.993370 CTTTCGTCAAGCCGTCCTTAG 59.007 52.381 0.00 0.00 31.00 2.18
4586 9049 0.389426 TTCGTCAAGCCGTCCTTAGC 60.389 55.000 0.00 0.00 31.00 3.09
4587 9050 1.810030 CGTCAAGCCGTCCTTAGCC 60.810 63.158 0.00 0.00 31.00 3.93
4588 9051 1.810030 GTCAAGCCGTCCTTAGCCG 60.810 63.158 0.00 0.00 31.00 5.52
4589 9052 2.511600 CAAGCCGTCCTTAGCCGG 60.512 66.667 0.00 0.00 46.90 6.13
4590 9053 3.782443 AAGCCGTCCTTAGCCGGG 61.782 66.667 2.18 0.00 44.36 5.73
4608 9071 3.554692 CGCGCCCATGTCTCGTTC 61.555 66.667 0.00 0.00 0.00 3.95
4609 9072 3.195698 GCGCCCATGTCTCGTTCC 61.196 66.667 0.00 0.00 0.00 3.62
4610 9073 2.579201 CGCCCATGTCTCGTTCCT 59.421 61.111 0.00 0.00 0.00 3.36
4611 9074 1.811266 CGCCCATGTCTCGTTCCTG 60.811 63.158 0.00 0.00 0.00 3.86
4612 9075 1.450312 GCCCATGTCTCGTTCCTGG 60.450 63.158 0.00 0.00 0.00 4.45
4613 9076 1.450312 CCCATGTCTCGTTCCTGGC 60.450 63.158 0.00 0.00 0.00 4.85
4614 9077 1.811266 CCATGTCTCGTTCCTGGCG 60.811 63.158 0.00 0.00 0.00 5.69
4615 9078 1.215382 CATGTCTCGTTCCTGGCGA 59.785 57.895 0.00 0.00 36.85 5.54
4616 9079 0.389817 CATGTCTCGTTCCTGGCGAA 60.390 55.000 0.00 0.00 37.93 4.70
4617 9080 0.537188 ATGTCTCGTTCCTGGCGAAT 59.463 50.000 0.00 0.00 37.93 3.34
4618 9081 0.108804 TGTCTCGTTCCTGGCGAATC 60.109 55.000 0.00 0.00 37.93 2.52
4619 9082 0.806492 GTCTCGTTCCTGGCGAATCC 60.806 60.000 0.00 0.00 37.93 3.01
4620 9083 0.970937 TCTCGTTCCTGGCGAATCCT 60.971 55.000 0.00 0.00 37.93 3.24
4621 9084 0.528684 CTCGTTCCTGGCGAATCCTC 60.529 60.000 0.00 0.00 37.93 3.71
4622 9085 1.218047 CGTTCCTGGCGAATCCTCA 59.782 57.895 0.00 0.00 35.26 3.86
4623 9086 0.179073 CGTTCCTGGCGAATCCTCAT 60.179 55.000 0.00 0.00 35.26 2.90
4624 9087 1.743772 CGTTCCTGGCGAATCCTCATT 60.744 52.381 0.00 0.00 35.26 2.57
4625 9088 2.369394 GTTCCTGGCGAATCCTCATTT 58.631 47.619 0.00 0.00 35.26 2.32
4626 9089 2.042686 TCCTGGCGAATCCTCATTTG 57.957 50.000 0.00 0.00 35.26 2.32
4627 9090 1.559219 TCCTGGCGAATCCTCATTTGA 59.441 47.619 0.00 0.00 35.26 2.69
4628 9091 2.173356 TCCTGGCGAATCCTCATTTGAT 59.827 45.455 0.00 0.00 35.26 2.57
4629 9092 2.292569 CCTGGCGAATCCTCATTTGATG 59.707 50.000 0.00 0.00 35.26 3.07
4630 9093 1.677576 TGGCGAATCCTCATTTGATGC 59.322 47.619 0.00 0.00 35.26 3.91
4631 9094 1.000938 GGCGAATCCTCATTTGATGCC 60.001 52.381 0.00 0.00 0.00 4.40
4632 9095 1.952296 GCGAATCCTCATTTGATGCCT 59.048 47.619 0.00 0.00 0.00 4.75
4633 9096 2.287427 GCGAATCCTCATTTGATGCCTG 60.287 50.000 0.00 0.00 0.00 4.85
4634 9097 2.287427 CGAATCCTCATTTGATGCCTGC 60.287 50.000 0.00 0.00 0.00 4.85
4635 9098 2.447408 ATCCTCATTTGATGCCTGCA 57.553 45.000 0.00 0.00 0.00 4.41
4636 9099 1.466856 TCCTCATTTGATGCCTGCAC 58.533 50.000 0.00 0.00 0.00 4.57
4637 9100 1.179152 CCTCATTTGATGCCTGCACA 58.821 50.000 0.00 0.00 0.00 4.57
4638 9101 1.135199 CCTCATTTGATGCCTGCACAC 60.135 52.381 0.00 0.00 0.00 3.82
4639 9102 0.522626 TCATTTGATGCCTGCACACG 59.477 50.000 0.00 0.00 0.00 4.49
4640 9103 0.241749 CATTTGATGCCTGCACACGT 59.758 50.000 0.00 0.00 0.00 4.49
4641 9104 0.241749 ATTTGATGCCTGCACACGTG 59.758 50.000 15.48 15.48 0.00 4.49
4642 9105 1.100463 TTTGATGCCTGCACACGTGT 61.100 50.000 17.22 17.22 0.00 4.49
4643 9106 0.250081 TTGATGCCTGCACACGTGTA 60.250 50.000 22.90 5.85 0.00 2.90
4644 9107 0.036483 TGATGCCTGCACACGTGTAT 60.036 50.000 22.90 10.20 0.00 2.29
4645 9108 1.086696 GATGCCTGCACACGTGTATT 58.913 50.000 22.90 0.00 0.00 1.89
4646 9109 1.468520 GATGCCTGCACACGTGTATTT 59.531 47.619 22.90 2.00 0.00 1.40
4647 9110 1.313772 TGCCTGCACACGTGTATTTT 58.686 45.000 22.90 0.00 0.00 1.82
4648 9111 1.001924 TGCCTGCACACGTGTATTTTG 60.002 47.619 22.90 9.94 0.00 2.44
4649 9112 1.685302 CCTGCACACGTGTATTTTGC 58.315 50.000 22.90 20.13 0.00 3.68
4650 9113 1.001924 CCTGCACACGTGTATTTTGCA 60.002 47.619 22.90 23.53 40.81 4.08
4651 9114 2.542618 CCTGCACACGTGTATTTTGCAA 60.543 45.455 24.97 13.20 42.38 4.08
4652 9115 3.111838 CTGCACACGTGTATTTTGCAAA 58.888 40.909 24.97 8.05 42.38 3.68
4653 9116 2.854777 TGCACACGTGTATTTTGCAAAC 59.145 40.909 23.49 1.55 40.15 2.93
4654 9117 2.098116 GCACACGTGTATTTTGCAAACG 60.098 45.455 22.90 14.99 40.00 3.60
4655 9118 2.465839 CACACGTGTATTTTGCAAACGG 59.534 45.455 22.90 13.61 38.52 4.44
4656 9119 2.047769 CACGTGTATTTTGCAAACGGG 58.952 47.619 20.91 15.25 38.52 5.28
4657 9120 1.056869 CGTGTATTTTGCAAACGGGC 58.943 50.000 12.39 3.48 0.00 6.13
4658 9121 1.056869 GTGTATTTTGCAAACGGGCG 58.943 50.000 12.39 0.00 36.28 6.13
4659 9122 0.664767 TGTATTTTGCAAACGGGCGC 60.665 50.000 12.39 0.00 36.28 6.53
4660 9123 0.388006 GTATTTTGCAAACGGGCGCT 60.388 50.000 12.39 0.00 36.28 5.92
4661 9124 0.387878 TATTTTGCAAACGGGCGCTG 60.388 50.000 12.39 2.40 36.28 5.18
4662 9125 4.940593 TTTGCAAACGGGCGCTGC 62.941 61.111 8.05 9.81 36.28 5.25
4696 9159 3.978876 GGCCGGCCCATATAGATTT 57.021 52.632 36.64 0.00 0.00 2.17
4697 9160 2.215942 GGCCGGCCCATATAGATTTT 57.784 50.000 36.64 0.00 0.00 1.82
4698 9161 2.525368 GGCCGGCCCATATAGATTTTT 58.475 47.619 36.64 0.00 0.00 1.94
4720 9183 6.413783 TTTCTTCTGTGTTTTTAATCCCCC 57.586 37.500 0.00 0.00 0.00 5.40
4721 9184 5.068215 TCTTCTGTGTTTTTAATCCCCCA 57.932 39.130 0.00 0.00 0.00 4.96
4722 9185 5.459505 TCTTCTGTGTTTTTAATCCCCCAA 58.540 37.500 0.00 0.00 0.00 4.12
4723 9186 5.900123 TCTTCTGTGTTTTTAATCCCCCAAA 59.100 36.000 0.00 0.00 0.00 3.28
4724 9187 6.384305 TCTTCTGTGTTTTTAATCCCCCAAAA 59.616 34.615 0.00 0.00 0.00 2.44
4725 9188 6.561519 TCTGTGTTTTTAATCCCCCAAAAA 57.438 33.333 0.00 0.00 32.67 1.94
4726 9189 7.142995 TCTGTGTTTTTAATCCCCCAAAAAT 57.857 32.000 0.00 0.00 36.38 1.82
4727 9190 6.995091 TCTGTGTTTTTAATCCCCCAAAAATG 59.005 34.615 0.00 0.00 36.38 2.32
4728 9191 5.532779 TGTGTTTTTAATCCCCCAAAAATGC 59.467 36.000 0.00 0.00 36.38 3.56
4729 9192 4.757149 TGTTTTTAATCCCCCAAAAATGCG 59.243 37.500 0.00 0.00 36.38 4.73
4730 9193 2.682155 TTAATCCCCCAAAAATGCGC 57.318 45.000 0.00 0.00 0.00 6.09
4731 9194 1.561643 TAATCCCCCAAAAATGCGCA 58.438 45.000 14.96 14.96 0.00 6.09
4732 9195 0.036483 AATCCCCCAAAAATGCGCAC 60.036 50.000 14.90 0.00 0.00 5.34
4733 9196 1.190833 ATCCCCCAAAAATGCGCACA 61.191 50.000 14.90 0.00 0.00 4.57
4734 9197 1.667510 CCCCCAAAAATGCGCACAC 60.668 57.895 14.90 0.00 0.00 3.82
4735 9198 1.367102 CCCCAAAAATGCGCACACT 59.633 52.632 14.90 0.00 0.00 3.55
4736 9199 0.249826 CCCCAAAAATGCGCACACTT 60.250 50.000 14.90 3.34 0.00 3.16
4737 9200 0.860533 CCCAAAAATGCGCACACTTG 59.139 50.000 14.90 15.87 0.00 3.16
4738 9201 1.569708 CCAAAAATGCGCACACTTGT 58.430 45.000 14.90 0.00 0.00 3.16
4740 9203 1.258458 CAAAAATGCGCACACTTGTGG 59.742 47.619 14.90 0.00 45.72 4.17
4741 9204 0.459489 AAAATGCGCACACTTGTGGT 59.541 45.000 14.90 0.00 45.72 4.16
4758 9221 1.950909 TGGTGATTCAAACCAACGACC 59.049 47.619 0.00 0.00 44.72 4.79
4759 9222 2.227194 GGTGATTCAAACCAACGACCT 58.773 47.619 0.00 0.00 37.65 3.85
4760 9223 2.225727 GGTGATTCAAACCAACGACCTC 59.774 50.000 0.00 0.00 37.65 3.85
4761 9224 2.225727 GTGATTCAAACCAACGACCTCC 59.774 50.000 0.00 0.00 0.00 4.30
4762 9225 1.810755 GATTCAAACCAACGACCTCCC 59.189 52.381 0.00 0.00 0.00 4.30
4763 9226 0.841289 TTCAAACCAACGACCTCCCT 59.159 50.000 0.00 0.00 0.00 4.20
4764 9227 0.395312 TCAAACCAACGACCTCCCTC 59.605 55.000 0.00 0.00 0.00 4.30
4765 9228 0.396811 CAAACCAACGACCTCCCTCT 59.603 55.000 0.00 0.00 0.00 3.69
4766 9229 1.137697 AAACCAACGACCTCCCTCTT 58.862 50.000 0.00 0.00 0.00 2.85
4767 9230 0.685660 AACCAACGACCTCCCTCTTC 59.314 55.000 0.00 0.00 0.00 2.87
4768 9231 0.471211 ACCAACGACCTCCCTCTTCA 60.471 55.000 0.00 0.00 0.00 3.02
4769 9232 0.685097 CCAACGACCTCCCTCTTCAA 59.315 55.000 0.00 0.00 0.00 2.69
4770 9233 1.279271 CCAACGACCTCCCTCTTCAAT 59.721 52.381 0.00 0.00 0.00 2.57
4771 9234 2.500098 CCAACGACCTCCCTCTTCAATA 59.500 50.000 0.00 0.00 0.00 1.90
4772 9235 3.522553 CAACGACCTCCCTCTTCAATAC 58.477 50.000 0.00 0.00 0.00 1.89
4773 9236 1.749634 ACGACCTCCCTCTTCAATACG 59.250 52.381 0.00 0.00 0.00 3.06
4774 9237 1.067212 CGACCTCCCTCTTCAATACGG 59.933 57.143 0.00 0.00 0.00 4.02
4775 9238 2.385803 GACCTCCCTCTTCAATACGGA 58.614 52.381 0.00 0.00 0.00 4.69
4776 9239 2.966516 GACCTCCCTCTTCAATACGGAT 59.033 50.000 0.00 0.00 0.00 4.18
4777 9240 3.385115 ACCTCCCTCTTCAATACGGATT 58.615 45.455 0.00 0.00 0.00 3.01
4778 9241 3.134804 ACCTCCCTCTTCAATACGGATTG 59.865 47.826 14.58 14.58 43.39 2.67
4779 9242 3.495100 CCTCCCTCTTCAATACGGATTGG 60.495 52.174 20.17 5.42 42.45 3.16
4780 9243 3.112263 TCCCTCTTCAATACGGATTGGT 58.888 45.455 20.17 0.00 42.45 3.67
4781 9244 3.118408 TCCCTCTTCAATACGGATTGGTG 60.118 47.826 20.17 12.80 42.45 4.17
4782 9245 2.614057 CCTCTTCAATACGGATTGGTGC 59.386 50.000 20.17 0.00 42.45 5.01
4783 9246 3.270027 CTCTTCAATACGGATTGGTGCA 58.730 45.455 20.17 0.00 42.45 4.57
4784 9247 3.680490 TCTTCAATACGGATTGGTGCAA 58.320 40.909 20.17 6.30 42.45 4.08
4785 9248 3.438781 TCTTCAATACGGATTGGTGCAAC 59.561 43.478 20.17 0.00 42.45 4.17
4796 9259 3.609703 GTGCAACCACACCACCAA 58.390 55.556 0.00 0.00 41.67 3.67
4797 9260 1.140804 GTGCAACCACACCACCAAC 59.859 57.895 0.00 0.00 41.67 3.77
4798 9261 2.055042 TGCAACCACACCACCAACC 61.055 57.895 0.00 0.00 0.00 3.77
4799 9262 2.055042 GCAACCACACCACCAACCA 61.055 57.895 0.00 0.00 0.00 3.67
4800 9263 2.015227 GCAACCACACCACCAACCAG 62.015 60.000 0.00 0.00 0.00 4.00
4801 9264 1.756561 AACCACACCACCAACCAGC 60.757 57.895 0.00 0.00 0.00 4.85
4802 9265 2.912025 CCACACCACCAACCAGCC 60.912 66.667 0.00 0.00 0.00 4.85
4803 9266 3.286751 CACACCACCAACCAGCCG 61.287 66.667 0.00 0.00 0.00 5.52
4804 9267 4.579384 ACACCACCAACCAGCCGG 62.579 66.667 0.00 0.00 38.77 6.13
4805 9268 4.263572 CACCACCAACCAGCCGGA 62.264 66.667 5.05 0.00 35.59 5.14
4806 9269 3.256960 ACCACCAACCAGCCGGAT 61.257 61.111 5.05 0.00 35.59 4.18
4807 9270 2.438434 CCACCAACCAGCCGGATC 60.438 66.667 5.05 0.00 35.59 3.36
4808 9271 2.671070 CACCAACCAGCCGGATCT 59.329 61.111 5.05 0.00 35.59 2.75
4809 9272 1.746615 CACCAACCAGCCGGATCTG 60.747 63.158 5.05 3.32 35.59 2.90
4816 9279 2.348411 CCAGCCGGATCTGGTTAATT 57.652 50.000 21.88 0.61 46.59 1.40
4817 9280 3.485463 CCAGCCGGATCTGGTTAATTA 57.515 47.619 21.88 0.00 46.59 1.40
4818 9281 3.403038 CCAGCCGGATCTGGTTAATTAG 58.597 50.000 21.88 3.71 46.59 1.73
4819 9282 3.071023 CCAGCCGGATCTGGTTAATTAGA 59.929 47.826 21.88 0.00 46.59 2.10
4820 9283 4.444306 CCAGCCGGATCTGGTTAATTAGAA 60.444 45.833 21.88 0.00 46.59 2.10
4821 9284 4.511826 CAGCCGGATCTGGTTAATTAGAAC 59.488 45.833 21.88 1.06 0.00 3.01
4862 9325 8.418597 GGTTAATTAGAACCTTTCCTTCCTTT 57.581 34.615 3.28 0.00 44.75 3.11
4863 9326 8.867097 GGTTAATTAGAACCTTTCCTTCCTTTT 58.133 33.333 3.28 0.00 44.75 2.27
4869 9332 9.877222 TTAGAACCTTTCCTTCCTTTTATTCTT 57.123 29.630 0.00 0.00 0.00 2.52
4870 9333 8.783660 AGAACCTTTCCTTCCTTTTATTCTTT 57.216 30.769 0.00 0.00 0.00 2.52
4871 9334 8.861086 AGAACCTTTCCTTCCTTTTATTCTTTC 58.139 33.333 0.00 0.00 0.00 2.62
4872 9335 8.783660 AACCTTTCCTTCCTTTTATTCTTTCT 57.216 30.769 0.00 0.00 0.00 2.52
4873 9336 8.783660 ACCTTTCCTTCCTTTTATTCTTTCTT 57.216 30.769 0.00 0.00 0.00 2.52
4874 9337 9.213777 ACCTTTCCTTCCTTTTATTCTTTCTTT 57.786 29.630 0.00 0.00 0.00 2.52
4878 9341 7.882179 TCCTTCCTTTTATTCTTTCTTTTCCG 58.118 34.615 0.00 0.00 0.00 4.30
4879 9342 7.504574 TCCTTCCTTTTATTCTTTCTTTTCCGT 59.495 33.333 0.00 0.00 0.00 4.69
4880 9343 8.141909 CCTTCCTTTTATTCTTTCTTTTCCGTT 58.858 33.333 0.00 0.00 0.00 4.44
4881 9344 9.529325 CTTCCTTTTATTCTTTCTTTTCCGTTT 57.471 29.630 0.00 0.00 0.00 3.60
4882 9345 9.878667 TTCCTTTTATTCTTTCTTTTCCGTTTT 57.121 25.926 0.00 0.00 0.00 2.43
4883 9346 9.524106 TCCTTTTATTCTTTCTTTTCCGTTTTC 57.476 29.630 0.00 0.00 0.00 2.29
4884 9347 9.529325 CCTTTTATTCTTTCTTTTCCGTTTTCT 57.471 29.630 0.00 0.00 0.00 2.52
4890 9353 9.653287 ATTCTTTCTTTTCCGTTTTCTCTTTTT 57.347 25.926 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
382 383 5.600484 AGACGGAGATTGATATCCTTCTGTT 59.400 40.000 11.48 0.00 42.80 3.16
428 430 6.713762 TGGCTTTGGTGAATAATGAATAGG 57.286 37.500 0.00 0.00 0.00 2.57
611 630 1.266867 ACCCATACCCGTGTACCCAC 61.267 60.000 0.00 0.00 38.27 4.61
783 802 4.479619 GCTACCAGCAAACATCTTCAAAG 58.520 43.478 0.00 0.00 41.89 2.77
785 804 2.819608 GGCTACCAGCAAACATCTTCAA 59.180 45.455 0.00 0.00 44.75 2.69
786 805 2.040278 AGGCTACCAGCAAACATCTTCA 59.960 45.455 0.00 0.00 44.75 3.02
787 806 2.716217 AGGCTACCAGCAAACATCTTC 58.284 47.619 0.00 0.00 44.75 2.87
788 807 2.887151 AGGCTACCAGCAAACATCTT 57.113 45.000 0.00 0.00 44.75 2.40
789 808 4.010349 GTTTAGGCTACCAGCAAACATCT 58.990 43.478 0.00 0.00 44.75 2.90
790 809 3.756434 TGTTTAGGCTACCAGCAAACATC 59.244 43.478 10.85 0.00 44.75 3.06
791 810 3.506067 GTGTTTAGGCTACCAGCAAACAT 59.494 43.478 15.50 0.00 43.86 2.71
792 811 2.882137 GTGTTTAGGCTACCAGCAAACA 59.118 45.455 10.85 10.85 44.75 2.83
793 812 3.146847 AGTGTTTAGGCTACCAGCAAAC 58.853 45.455 0.00 0.00 44.75 2.93
794 813 3.502123 AGTGTTTAGGCTACCAGCAAA 57.498 42.857 0.00 0.00 44.75 3.68
795 814 4.469945 AGATAGTGTTTAGGCTACCAGCAA 59.530 41.667 0.00 0.00 44.75 3.91
796 815 4.030913 AGATAGTGTTTAGGCTACCAGCA 58.969 43.478 0.00 0.00 44.75 4.41
797 816 4.099573 TCAGATAGTGTTTAGGCTACCAGC 59.900 45.833 0.00 0.00 41.46 4.85
798 817 5.127194 TGTCAGATAGTGTTTAGGCTACCAG 59.873 44.000 0.00 0.00 0.00 4.00
799 818 5.020795 TGTCAGATAGTGTTTAGGCTACCA 58.979 41.667 0.00 0.00 0.00 3.25
800 819 5.593679 TGTCAGATAGTGTTTAGGCTACC 57.406 43.478 0.00 0.00 0.00 3.18
801 820 6.418226 CGAATGTCAGATAGTGTTTAGGCTAC 59.582 42.308 0.00 0.00 0.00 3.58
802 821 6.096423 ACGAATGTCAGATAGTGTTTAGGCTA 59.904 38.462 0.00 0.00 0.00 3.93
803 822 5.105310 ACGAATGTCAGATAGTGTTTAGGCT 60.105 40.000 0.00 0.00 0.00 4.58
804 823 5.109903 ACGAATGTCAGATAGTGTTTAGGC 58.890 41.667 0.00 0.00 0.00 3.93
805 824 6.814076 GACGAATGTCAGATAGTGTTTAGG 57.186 41.667 0.00 0.00 44.82 2.69
863 882 9.621239 AGGGGAAATGATATTCTAGAGATAACA 57.379 33.333 0.00 0.81 0.00 2.41
866 885 9.273137 GGAAGGGGAAATGATATTCTAGAGATA 57.727 37.037 0.00 0.00 0.00 1.98
867 886 7.183657 GGGAAGGGGAAATGATATTCTAGAGAT 59.816 40.741 0.00 0.00 0.00 2.75
868 887 6.502158 GGGAAGGGGAAATGATATTCTAGAGA 59.498 42.308 0.00 0.00 0.00 3.10
869 888 6.503570 AGGGAAGGGGAAATGATATTCTAGAG 59.496 42.308 0.00 0.00 0.00 2.43
870 889 6.402442 AGGGAAGGGGAAATGATATTCTAGA 58.598 40.000 0.00 0.00 0.00 2.43
871 890 6.710499 AGGGAAGGGGAAATGATATTCTAG 57.290 41.667 0.00 0.00 0.00 2.43
872 891 8.590083 TTTAGGGAAGGGGAAATGATATTCTA 57.410 34.615 0.00 0.00 0.00 2.10
873 892 7.480222 TTTAGGGAAGGGGAAATGATATTCT 57.520 36.000 0.00 0.00 0.00 2.40
874 893 8.547481 TTTTTAGGGAAGGGGAAATGATATTC 57.453 34.615 0.00 0.00 0.00 1.75
933 952 4.410400 GGACCCAAGACCCTGCGG 62.410 72.222 0.00 0.00 0.00 5.69
934 953 2.411765 AAAGGACCCAAGACCCTGCG 62.412 60.000 0.00 0.00 0.00 5.18
935 954 0.609406 GAAAGGACCCAAGACCCTGC 60.609 60.000 0.00 0.00 0.00 4.85
936 955 0.321653 CGAAAGGACCCAAGACCCTG 60.322 60.000 0.00 0.00 0.00 4.45
937 956 0.767060 ACGAAAGGACCCAAGACCCT 60.767 55.000 0.00 0.00 0.00 4.34
938 957 0.605589 CACGAAAGGACCCAAGACCC 60.606 60.000 0.00 0.00 0.00 4.46
939 958 1.235281 GCACGAAAGGACCCAAGACC 61.235 60.000 0.00 0.00 0.00 3.85
972 991 2.818274 GCGTGGCGAAACCCTAGG 60.818 66.667 0.06 0.06 37.83 3.02
1006 1048 1.827399 TTGAACGGGAGAGGCCAGTC 61.827 60.000 5.01 0.00 44.81 3.51
1009 1051 2.747686 GTTGAACGGGAGAGGCCA 59.252 61.111 5.01 0.00 38.95 5.36
1010 1052 2.434359 CGTTGAACGGGAGAGGCC 60.434 66.667 10.31 0.00 38.08 5.19
1036 1093 2.048222 TTCTTCCGCAGCGTCTGG 60.048 61.111 15.05 0.00 31.21 3.86
1038 1095 2.262915 CCTTCTTCCGCAGCGTCT 59.737 61.111 15.05 0.00 0.00 4.18
1046 1103 1.437986 CCTAGGCGACCTTCTTCCG 59.562 63.158 0.00 0.00 34.61 4.30
1126 1183 2.187946 GTCCCCGAGCTGTGGATG 59.812 66.667 0.00 0.00 0.00 3.51
1131 1188 4.680537 ACGAGGTCCCCGAGCTGT 62.681 66.667 0.00 0.00 40.67 4.40
1262 1324 2.040813 AGAGATGCCAGGAAAGAAGCAA 59.959 45.455 0.00 0.00 38.99 3.91
1334 1399 1.743394 GAGAACAAGCATTAACCCCGG 59.257 52.381 0.00 0.00 0.00 5.73
1335 1400 2.711542 AGAGAACAAGCATTAACCCCG 58.288 47.619 0.00 0.00 0.00 5.73
1349 1414 2.548875 CTGCTCACCTGCATAGAGAAC 58.451 52.381 12.69 0.00 42.48 3.01
1435 1599 2.892374 CATGAGTGCGGTCTTACATCA 58.108 47.619 0.00 0.00 0.00 3.07
1472 1851 3.231160 GTTAAACATGGCGACGAAAAGG 58.769 45.455 0.00 0.00 0.00 3.11
1505 1884 1.138859 TCATCCATGGTAGAACTGGCG 59.861 52.381 12.58 0.00 0.00 5.69
1532 1911 2.290367 GCAGTGCGGCATTTATGTATCA 59.710 45.455 5.72 0.00 0.00 2.15
1547 1926 2.974698 AAGAGTGTGGCGCAGTGC 60.975 61.111 14.06 4.58 45.38 4.40
1575 1954 5.851720 TGCAAAAAGGCAAATATGAAGTGA 58.148 33.333 0.00 0.00 41.65 3.41
1597 1976 1.662629 ACTCTGAAAAGATGCGCGATG 59.337 47.619 12.10 0.00 0.00 3.84
1695 2082 8.846423 TTAGAGGCAATAATTTGGGGATAAAA 57.154 30.769 0.00 0.00 33.22 1.52
1723 2110 4.082733 CCTCGACACAGATGAACTTAGACA 60.083 45.833 0.00 0.00 0.00 3.41
1799 2186 7.935520 TCTCATTATAGCAGACAGAGTACTTG 58.064 38.462 0.00 0.07 0.00 3.16
1887 2276 2.034812 GTGAGCGGAGGGAGTACTTATG 59.965 54.545 0.00 0.00 0.00 1.90
1941 2330 5.050091 CACTAAAACGGATCTACATGCATCC 60.050 44.000 0.00 8.34 36.01 3.51
1946 2335 6.721571 AACACACTAAAACGGATCTACATG 57.278 37.500 0.00 0.00 0.00 3.21
1949 2338 6.535274 ACAAACACACTAAAACGGATCTAC 57.465 37.500 0.00 0.00 0.00 2.59
1954 2343 4.696402 AGTGAACAAACACACTAAAACGGA 59.304 37.500 0.00 0.00 44.06 4.69
1969 2358 3.559655 CACGGACTGAAATGAGTGAACAA 59.440 43.478 0.00 0.00 0.00 2.83
2024 2413 9.614792 AATAGTATTCCCTCTGTTCACAAATAC 57.385 33.333 0.00 4.36 30.50 1.89
2052 2441 3.249189 TGTGGTGGTGGAGGCCTC 61.249 66.667 25.59 25.59 0.00 4.70
2138 2548 9.455847 GATGAAGTATCAATCAGGCAAAATAAC 57.544 33.333 0.00 0.00 39.49 1.89
2152 2562 6.373005 TCCCAAAGTCAGATGAAGTATCAA 57.627 37.500 0.00 0.00 39.49 2.57
2155 2565 6.125029 CCAATCCCAAAGTCAGATGAAGTAT 58.875 40.000 0.00 0.00 0.00 2.12
2191 2601 9.745880 GACAAAGACATACCGAAGAATATCTAA 57.254 33.333 0.00 0.00 0.00 2.10
2194 2604 9.915629 ATAGACAAAGACATACCGAAGAATATC 57.084 33.333 0.00 0.00 0.00 1.63
2235 5524 7.651304 CACATGACTTAAACTTTTGCACCATAA 59.349 33.333 0.00 0.00 0.00 1.90
2236 5525 7.013750 TCACATGACTTAAACTTTTGCACCATA 59.986 33.333 0.00 0.00 0.00 2.74
2237 5526 5.984926 CACATGACTTAAACTTTTGCACCAT 59.015 36.000 0.00 0.00 0.00 3.55
2257 5546 1.858910 TGGGGGAGCCAATAATCACAT 59.141 47.619 0.00 0.00 0.00 3.21
2274 5564 6.266103 ACAATGCATAACCTTAGATCATTGGG 59.734 38.462 0.00 0.00 41.85 4.12
2442 5744 8.038944 TGTGAATAGTCGAAAAGCCTACTATTT 58.961 33.333 7.72 0.00 42.37 1.40
2445 5747 6.519679 TGTGAATAGTCGAAAAGCCTACTA 57.480 37.500 0.00 0.00 0.00 1.82
2450 5752 7.073342 AGTAATTGTGAATAGTCGAAAAGCC 57.927 36.000 0.00 0.00 0.00 4.35
2451 5753 6.895040 CGAGTAATTGTGAATAGTCGAAAAGC 59.105 38.462 4.48 0.00 0.00 3.51
2457 5759 5.229469 GGTCACGAGTAATTGTGAATAGTCG 59.771 44.000 14.58 8.11 45.84 4.18
2460 5762 7.254455 GGAATGGTCACGAGTAATTGTGAATAG 60.254 40.741 14.58 0.00 45.84 1.73
2467 5769 5.466728 CCATAGGAATGGTCACGAGTAATTG 59.533 44.000 0.00 0.00 46.68 2.32
2470 5772 4.665833 CCATAGGAATGGTCACGAGTAA 57.334 45.455 0.00 0.00 46.68 2.24
2483 5785 7.689299 TGAGAGAAAATGAAAGACCATAGGAA 58.311 34.615 0.00 0.00 0.00 3.36
2645 6179 9.927668 AATCAACCGACTGAATAAATCAAATTT 57.072 25.926 0.00 0.00 37.67 1.82
2669 6203 9.193806 CATTGGATATGGCCTTATAAGCTAAAT 57.806 33.333 10.98 3.61 0.00 1.40
2688 6222 1.462616 TAAGCGTTGCTGCATTGGAT 58.537 45.000 1.84 0.00 39.62 3.41
2694 6228 2.093625 CGTCTAATTAAGCGTTGCTGCA 59.906 45.455 0.00 0.00 39.62 4.41
2703 6237 5.276726 CCTTTCCGTAAGCGTCTAATTAAGC 60.277 44.000 0.53 0.53 36.15 3.09
2714 6248 1.734163 ACATTCCCTTTCCGTAAGCG 58.266 50.000 0.00 0.00 37.95 4.68
2727 6261 5.743872 GCTTCATTCCACGAAAATACATTCC 59.256 40.000 0.00 0.00 0.00 3.01
2752 6286 1.413077 AGGCTAGGTTCATAAGTCGGC 59.587 52.381 0.00 0.00 0.00 5.54
2753 6287 2.036089 GGAGGCTAGGTTCATAAGTCGG 59.964 54.545 0.00 0.00 0.00 4.79
2754 6288 2.693591 TGGAGGCTAGGTTCATAAGTCG 59.306 50.000 0.00 0.00 0.00 4.18
2755 6289 4.755266 TTGGAGGCTAGGTTCATAAGTC 57.245 45.455 0.00 0.00 0.00 3.01
2756 6290 4.687219 GCATTGGAGGCTAGGTTCATAAGT 60.687 45.833 0.00 0.00 0.00 2.24
2757 6291 3.817647 GCATTGGAGGCTAGGTTCATAAG 59.182 47.826 0.00 0.00 0.00 1.73
2758 6292 3.201930 TGCATTGGAGGCTAGGTTCATAA 59.798 43.478 0.00 0.00 0.00 1.90
2759 6293 2.777114 TGCATTGGAGGCTAGGTTCATA 59.223 45.455 0.00 0.00 0.00 2.15
2760 6294 1.565759 TGCATTGGAGGCTAGGTTCAT 59.434 47.619 0.00 0.00 0.00 2.57
2761 6295 0.991146 TGCATTGGAGGCTAGGTTCA 59.009 50.000 0.00 0.00 0.00 3.18
2762 6296 2.355010 ATGCATTGGAGGCTAGGTTC 57.645 50.000 0.00 0.00 0.00 3.62
2763 6297 2.025037 TCAATGCATTGGAGGCTAGGTT 60.025 45.455 33.22 0.00 38.30 3.50
2764 6298 1.565759 TCAATGCATTGGAGGCTAGGT 59.434 47.619 33.22 0.00 38.30 3.08
2782 6316 2.820059 AAGTGTCTCACAATCGCTCA 57.180 45.000 2.80 0.00 36.74 4.26
2786 6320 9.569167 TTTAACTATCTAAGTGTCTCACAATCG 57.431 33.333 2.80 0.00 38.88 3.34
2817 6351 4.098807 ACGCTAAGTGGGTTTTTGATTGTT 59.901 37.500 0.00 0.00 38.82 2.83
2818 6352 3.634910 ACGCTAAGTGGGTTTTTGATTGT 59.365 39.130 0.00 0.00 38.82 2.71
2819 6353 3.980775 CACGCTAAGTGGGTTTTTGATTG 59.019 43.478 0.00 0.00 46.77 2.67
2820 6354 4.237349 CACGCTAAGTGGGTTTTTGATT 57.763 40.909 0.00 0.00 46.77 2.57
2821 6355 3.915437 CACGCTAAGTGGGTTTTTGAT 57.085 42.857 0.00 0.00 46.77 2.57
2872 6406 2.107378 TCCCTTGTGTCAATGCCTAACA 59.893 45.455 0.00 0.00 0.00 2.41
2877 6411 1.670811 CGTATCCCTTGTGTCAATGCC 59.329 52.381 0.00 0.00 0.00 4.40
2895 6429 1.153369 CGGCATGATTCCTGGTCGT 60.153 57.895 0.00 0.00 0.00 4.34
2896 6430 0.250038 ATCGGCATGATTCCTGGTCG 60.250 55.000 0.00 0.00 31.57 4.79
2906 6440 0.322366 TTGTGGCAGAATCGGCATGA 60.322 50.000 7.78 0.00 44.06 3.07
2923 6457 1.743394 GGTTCTAATTCCTGGCCGTTG 59.257 52.381 0.00 0.00 0.00 4.10
2966 6500 2.487934 CTTAGGCCATCATCTCCAACG 58.512 52.381 5.01 0.00 0.00 4.10
2986 6520 0.377905 GGCTCGACGTAGAGAGAACC 59.622 60.000 27.16 15.42 40.57 3.62
2989 6523 2.110901 AAAGGCTCGACGTAGAGAGA 57.889 50.000 27.16 3.71 40.57 3.10
3000 6534 7.810766 TTTAAAGCAATCAAATAAAGGCTCG 57.189 32.000 0.00 0.00 0.00 5.03
3153 6689 7.557358 TGCAGGAGATATTCTTTCATTAGCAAA 59.443 33.333 0.00 0.00 0.00 3.68
3217 6753 2.093764 CAGGTCACTCATCACCTCTTCC 60.094 54.545 0.00 0.00 41.41 3.46
3228 6764 5.488341 GAGCTTTATTTACCAGGTCACTCA 58.512 41.667 0.00 0.00 35.53 3.41
3245 6781 3.753797 GGGAATTGTTTCTCTCGAGCTTT 59.246 43.478 7.81 0.00 32.16 3.51
3261 6797 1.086696 CGCATGTCTTGTCGGGAATT 58.913 50.000 0.00 0.00 0.00 2.17
3315 6851 0.616395 TGGGAGTTCATCGTAGGCCA 60.616 55.000 5.01 0.00 0.00 5.36
3322 6858 4.877823 TCAGATGATTTTGGGAGTTCATCG 59.122 41.667 6.21 3.06 45.77 3.84
3385 6921 4.283467 AGGGGCTTTGTAGGTTTTTCAATC 59.717 41.667 0.00 0.00 0.00 2.67
3401 7111 0.541998 GGTGGCTTTACAAGGGGCTT 60.542 55.000 0.00 0.00 0.00 4.35
3430 7140 2.290641 CTGTTCCAGTTTTTGAGTCCCG 59.709 50.000 0.00 0.00 0.00 5.14
3438 7148 7.874528 GGAAATCATCAATCTGTTCCAGTTTTT 59.125 33.333 0.00 0.00 35.61 1.94
3451 7161 4.477249 ACCTCCCATGGAAATCATCAATC 58.523 43.478 15.22 0.00 32.92 2.67
3464 7174 0.692419 AGGCTCAGGTACCTCCCATG 60.692 60.000 12.84 0.87 36.75 3.66
3477 7187 5.070981 TCTCTCTCTTTTCTTTTGAGGCTCA 59.929 40.000 14.43 14.43 0.00 4.26
3526 7746 4.095410 TCGATCATGCAACAAACCATTC 57.905 40.909 0.00 0.00 0.00 2.67
3574 7794 0.888619 GTTGCTTTACAAGGGGCTCC 59.111 55.000 0.00 0.00 39.50 4.70
3626 7969 1.547223 CCTCCCATGGGAATCATCAGC 60.547 57.143 33.13 0.00 44.66 4.26
3814 8164 3.280295 AGAGAGGAAGACTTCGCGATTA 58.720 45.455 10.88 0.00 0.00 1.75
3820 8170 5.755861 ACTTGAAAAAGAGAGGAAGACTTCG 59.244 40.000 9.08 0.00 0.00 3.79
3874 8224 4.685169 TCATGAGGCGTTCTGAATTTTC 57.315 40.909 0.00 0.00 0.00 2.29
3891 8241 6.103997 GGCATATTTCCATAGCCATTTCATG 58.896 40.000 0.00 0.00 44.59 3.07
3892 8242 5.188359 GGGCATATTTCCATAGCCATTTCAT 59.812 40.000 0.00 0.00 46.96 2.57
3918 8268 3.372206 CGCATACAAAAGGTCTTCTCCAG 59.628 47.826 0.00 0.00 0.00 3.86
3927 8277 4.251268 GTCTAGAACCGCATACAAAAGGT 58.749 43.478 0.00 0.00 38.88 3.50
3929 8279 4.929808 AGTGTCTAGAACCGCATACAAAAG 59.070 41.667 0.00 0.00 0.00 2.27
3939 8312 2.404215 CACCACAAGTGTCTAGAACCG 58.596 52.381 0.00 0.00 41.93 4.44
3956 8329 6.747280 CACTAACATTGCATTAGTTTAGCACC 59.253 38.462 8.21 0.00 40.18 5.01
3959 8333 6.852664 ACCACTAACATTGCATTAGTTTAGC 58.147 36.000 8.21 0.00 40.18 3.09
3979 8353 6.719365 CACTAAGATGCTAATTTGCTACCAC 58.281 40.000 12.99 1.12 0.00 4.16
3993 8375 4.372656 CCTACACCTTAGCACTAAGATGC 58.627 47.826 17.14 0.00 39.71 3.91
3997 8379 2.766828 AGCCCTACACCTTAGCACTAAG 59.233 50.000 9.97 9.97 41.56 2.18
3998 8380 2.829023 AGCCCTACACCTTAGCACTAA 58.171 47.619 0.00 0.00 0.00 2.24
4013 8395 4.725490 ACATACACACAAAAGTTAGCCCT 58.275 39.130 0.00 0.00 0.00 5.19
4021 8403 4.640201 CCCAGGGATACATACACACAAAAG 59.360 45.833 0.00 0.00 39.74 2.27
4074 8468 1.468054 GGATTTGTGATCAAGCGCCAC 60.468 52.381 2.29 5.11 34.88 5.01
4077 8471 2.927553 AAGGATTTGTGATCAAGCGC 57.072 45.000 0.00 0.00 34.88 5.92
4125 8519 2.037121 TCTCGAACAGCTTGGTTCATGA 59.963 45.455 15.06 9.90 45.82 3.07
4129 8523 5.803020 ATAAATCTCGAACAGCTTGGTTC 57.197 39.130 6.82 6.82 42.88 3.62
4136 8530 8.311650 ACCATATGTAATAAATCTCGAACAGC 57.688 34.615 1.24 0.00 29.06 4.40
4143 8537 8.391106 GGCGATGAACCATATGTAATAAATCTC 58.609 37.037 1.24 0.00 29.06 2.75
4145 8539 8.268850 AGGCGATGAACCATATGTAATAAATC 57.731 34.615 1.24 0.00 29.06 2.17
4176 8570 1.666209 CCATGGCAAAAGGGGCTACG 61.666 60.000 0.00 0.00 0.00 3.51
4209 8646 3.151554 CATATGCAGCAAGCTGGGAATA 58.848 45.455 22.20 3.65 45.94 1.75
4265 8709 3.646946 CACGATGTACCAGATGGAGATG 58.353 50.000 5.72 0.00 38.94 2.90
4345 8793 5.364778 TGCACAATTTCATATACGGCTACT 58.635 37.500 0.00 0.00 0.00 2.57
4401 8849 2.557924 CAGCAAAAGCCACAATCCTACA 59.442 45.455 0.00 0.00 0.00 2.74
4434 8886 6.040878 CCTCAATTCCTTGCTCATTCATTTC 58.959 40.000 0.00 0.00 32.11 2.17
4443 8895 1.339151 ACGGACCTCAATTCCTTGCTC 60.339 52.381 0.00 0.00 32.11 4.26
4444 8896 0.693049 ACGGACCTCAATTCCTTGCT 59.307 50.000 0.00 0.00 32.11 3.91
4445 8897 1.200020 CAACGGACCTCAATTCCTTGC 59.800 52.381 0.00 0.00 32.11 4.01
4446 8898 1.200020 GCAACGGACCTCAATTCCTTG 59.800 52.381 0.00 0.00 0.00 3.61
4448 8900 0.400213 TGCAACGGACCTCAATTCCT 59.600 50.000 0.00 0.00 0.00 3.36
4449 8901 0.804989 CTGCAACGGACCTCAATTCC 59.195 55.000 0.00 0.00 0.00 3.01
4451 8903 1.813513 CTCTGCAACGGACCTCAATT 58.186 50.000 0.00 0.00 0.00 2.32
4452 8904 0.674895 GCTCTGCAACGGACCTCAAT 60.675 55.000 0.00 0.00 0.00 2.57
4453 8905 1.301716 GCTCTGCAACGGACCTCAA 60.302 57.895 0.00 0.00 0.00 3.02
4454 8906 2.343758 GCTCTGCAACGGACCTCA 59.656 61.111 0.00 0.00 0.00 3.86
4462 8925 1.230635 ATGTGGACGTGCTCTGCAAC 61.231 55.000 8.99 0.00 41.47 4.17
4470 8933 9.967346 AGAATATATATATACATGTGGACGTGC 57.033 33.333 9.11 0.00 36.36 5.34
4525 8988 8.992073 GGGAACGTTACATTTTTCTAGTTAGAA 58.008 33.333 13.62 0.00 40.33 2.10
4526 8989 8.370182 AGGGAACGTTACATTTTTCTAGTTAGA 58.630 33.333 13.62 0.00 0.00 2.10
4527 8990 8.543862 AGGGAACGTTACATTTTTCTAGTTAG 57.456 34.615 13.62 0.00 0.00 2.34
4528 8991 9.995003 TTAGGGAACGTTACATTTTTCTAGTTA 57.005 29.630 13.62 0.00 0.00 2.24
4529 8992 8.907222 TTAGGGAACGTTACATTTTTCTAGTT 57.093 30.769 13.62 0.00 0.00 2.24
4532 8995 9.086336 CGTATTAGGGAACGTTACATTTTTCTA 57.914 33.333 13.62 0.21 34.48 2.10
4533 8996 7.413328 GCGTATTAGGGAACGTTACATTTTTCT 60.413 37.037 13.62 1.24 41.10 2.52
4534 8997 6.684131 GCGTATTAGGGAACGTTACATTTTTC 59.316 38.462 13.62 0.00 41.10 2.29
4535 8998 6.372381 AGCGTATTAGGGAACGTTACATTTTT 59.628 34.615 13.62 0.00 41.10 1.94
4536 8999 5.876460 AGCGTATTAGGGAACGTTACATTTT 59.124 36.000 13.62 0.00 41.10 1.82
4537 9000 5.422145 AGCGTATTAGGGAACGTTACATTT 58.578 37.500 13.62 0.00 41.10 2.32
4538 9001 5.014808 AGCGTATTAGGGAACGTTACATT 57.985 39.130 13.62 2.24 41.10 2.71
4539 9002 4.660789 AGCGTATTAGGGAACGTTACAT 57.339 40.909 13.62 8.10 41.10 2.29
4540 9003 4.158394 AGAAGCGTATTAGGGAACGTTACA 59.842 41.667 13.62 0.00 41.10 2.41
4541 9004 4.676546 AGAAGCGTATTAGGGAACGTTAC 58.323 43.478 0.42 0.42 41.10 2.50
4542 9005 4.989279 AGAAGCGTATTAGGGAACGTTA 57.011 40.909 0.00 0.00 41.10 3.18
4543 9006 3.881937 AGAAGCGTATTAGGGAACGTT 57.118 42.857 0.00 0.00 41.10 3.99
4544 9007 3.446516 AGAAGAAGCGTATTAGGGAACGT 59.553 43.478 0.00 0.00 41.10 3.99
4545 9008 4.043037 AGAAGAAGCGTATTAGGGAACG 57.957 45.455 0.00 0.00 41.92 3.95
4546 9009 5.005490 CGAAAGAAGAAGCGTATTAGGGAAC 59.995 44.000 0.00 0.00 0.00 3.62
4547 9010 5.107133 CGAAAGAAGAAGCGTATTAGGGAA 58.893 41.667 0.00 0.00 0.00 3.97
4548 9011 4.159135 ACGAAAGAAGAAGCGTATTAGGGA 59.841 41.667 0.00 0.00 34.93 4.20
4549 9012 4.430908 ACGAAAGAAGAAGCGTATTAGGG 58.569 43.478 0.00 0.00 34.93 3.53
4550 9013 5.100259 TGACGAAAGAAGAAGCGTATTAGG 58.900 41.667 0.00 0.00 37.07 2.69
4551 9014 6.627690 TTGACGAAAGAAGAAGCGTATTAG 57.372 37.500 0.00 0.00 37.07 1.73
4552 9015 5.061808 GCTTGACGAAAGAAGAAGCGTATTA 59.938 40.000 6.77 0.00 38.24 0.98
4553 9016 4.143094 GCTTGACGAAAGAAGAAGCGTATT 60.143 41.667 6.77 0.00 38.24 1.89
4554 9017 3.368236 GCTTGACGAAAGAAGAAGCGTAT 59.632 43.478 6.77 0.00 38.24 3.06
4555 9018 2.729882 GCTTGACGAAAGAAGAAGCGTA 59.270 45.455 6.77 0.00 38.24 4.42
4556 9019 1.527311 GCTTGACGAAAGAAGAAGCGT 59.473 47.619 6.77 0.00 38.24 5.07
4557 9020 1.136224 GGCTTGACGAAAGAAGAAGCG 60.136 52.381 6.77 0.00 39.35 4.68
4558 9021 1.136224 CGGCTTGACGAAAGAAGAAGC 60.136 52.381 6.77 0.00 38.24 3.86
4559 9022 2.135933 ACGGCTTGACGAAAGAAGAAG 58.864 47.619 1.78 0.00 38.24 2.85
4560 9023 2.132762 GACGGCTTGACGAAAGAAGAA 58.867 47.619 1.78 0.00 38.24 2.52
4561 9024 1.604693 GGACGGCTTGACGAAAGAAGA 60.605 52.381 1.78 0.00 38.24 2.87
4562 9025 0.790814 GGACGGCTTGACGAAAGAAG 59.209 55.000 1.78 2.76 38.24 2.85
4563 9026 0.391597 AGGACGGCTTGACGAAAGAA 59.608 50.000 1.78 0.00 38.24 2.52
4564 9027 0.391597 AAGGACGGCTTGACGAAAGA 59.608 50.000 1.78 0.00 38.24 2.52
4565 9028 1.993370 CTAAGGACGGCTTGACGAAAG 59.007 52.381 1.78 0.00 39.07 2.62
4566 9029 1.938016 GCTAAGGACGGCTTGACGAAA 60.938 52.381 1.78 0.00 37.61 3.46
4567 9030 0.389426 GCTAAGGACGGCTTGACGAA 60.389 55.000 1.78 0.00 37.61 3.85
4568 9031 1.214589 GCTAAGGACGGCTTGACGA 59.785 57.895 1.78 0.00 37.61 4.20
4569 9032 1.810030 GGCTAAGGACGGCTTGACG 60.810 63.158 0.00 0.00 40.31 4.35
4570 9033 1.810030 CGGCTAAGGACGGCTTGAC 60.810 63.158 0.00 0.00 40.87 3.18
4571 9034 2.577059 CGGCTAAGGACGGCTTGA 59.423 61.111 0.00 0.00 40.87 3.02
4591 9054 3.554692 GAACGAGACATGGGCGCG 61.555 66.667 0.00 0.00 34.71 6.86
4592 9055 3.195698 GGAACGAGACATGGGCGC 61.196 66.667 0.00 0.00 0.00 6.53
4593 9056 1.811266 CAGGAACGAGACATGGGCG 60.811 63.158 0.00 0.00 0.00 6.13
4594 9057 1.450312 CCAGGAACGAGACATGGGC 60.450 63.158 0.00 0.00 35.86 5.36
4595 9058 1.450312 GCCAGGAACGAGACATGGG 60.450 63.158 0.00 0.00 39.23 4.00
4596 9059 1.811266 CGCCAGGAACGAGACATGG 60.811 63.158 0.00 0.00 41.34 3.66
4597 9060 0.389817 TTCGCCAGGAACGAGACATG 60.390 55.000 0.00 0.00 41.18 3.21
4598 9061 0.537188 ATTCGCCAGGAACGAGACAT 59.463 50.000 0.00 0.00 41.18 3.06
4599 9062 0.108804 GATTCGCCAGGAACGAGACA 60.109 55.000 0.00 0.00 41.18 3.41
4600 9063 0.806492 GGATTCGCCAGGAACGAGAC 60.806 60.000 0.00 0.00 41.18 3.36
4601 9064 0.970937 AGGATTCGCCAGGAACGAGA 60.971 55.000 0.00 0.00 41.18 4.04
4602 9065 0.528684 GAGGATTCGCCAGGAACGAG 60.529 60.000 0.00 0.00 41.18 4.18
4603 9066 1.254975 TGAGGATTCGCCAGGAACGA 61.255 55.000 0.00 0.00 37.50 3.85
4604 9067 0.179073 ATGAGGATTCGCCAGGAACG 60.179 55.000 0.00 0.00 37.50 3.95
4605 9068 2.044123 AATGAGGATTCGCCAGGAAC 57.956 50.000 0.00 0.00 37.50 3.62
4606 9069 2.026356 TCAAATGAGGATTCGCCAGGAA 60.026 45.455 0.00 0.00 40.02 3.36
4607 9070 1.559219 TCAAATGAGGATTCGCCAGGA 59.441 47.619 0.00 0.00 40.02 3.86
4608 9071 2.042686 TCAAATGAGGATTCGCCAGG 57.957 50.000 0.00 0.00 40.02 4.45
4609 9072 2.287427 GCATCAAATGAGGATTCGCCAG 60.287 50.000 0.00 0.00 40.02 4.85
4610 9073 1.677576 GCATCAAATGAGGATTCGCCA 59.322 47.619 0.00 0.00 40.02 5.69
4611 9074 1.000938 GGCATCAAATGAGGATTCGCC 60.001 52.381 0.00 0.00 0.00 5.54
4612 9075 1.952296 AGGCATCAAATGAGGATTCGC 59.048 47.619 0.00 0.00 0.00 4.70
4613 9076 2.287427 GCAGGCATCAAATGAGGATTCG 60.287 50.000 0.00 0.00 0.00 3.34
4614 9077 2.691526 TGCAGGCATCAAATGAGGATTC 59.308 45.455 0.00 0.00 0.00 2.52
4615 9078 2.429610 GTGCAGGCATCAAATGAGGATT 59.570 45.455 0.00 0.00 0.00 3.01
4616 9079 2.029623 GTGCAGGCATCAAATGAGGAT 58.970 47.619 0.00 0.00 0.00 3.24
4617 9080 1.272037 TGTGCAGGCATCAAATGAGGA 60.272 47.619 0.00 0.00 0.00 3.71
4618 9081 1.135199 GTGTGCAGGCATCAAATGAGG 60.135 52.381 0.00 0.00 0.00 3.86
4619 9082 1.466866 CGTGTGCAGGCATCAAATGAG 60.467 52.381 0.00 0.00 0.00 2.90
4620 9083 0.522626 CGTGTGCAGGCATCAAATGA 59.477 50.000 0.00 0.00 0.00 2.57
4621 9084 0.241749 ACGTGTGCAGGCATCAAATG 59.758 50.000 0.00 0.00 0.00 2.32
4622 9085 0.241749 CACGTGTGCAGGCATCAAAT 59.758 50.000 7.58 0.00 0.00 2.32
4623 9086 1.100463 ACACGTGTGCAGGCATCAAA 61.100 50.000 22.71 0.00 0.00 2.69
4624 9087 0.250081 TACACGTGTGCAGGCATCAA 60.250 50.000 30.83 3.71 0.00 2.57
4625 9088 0.036483 ATACACGTGTGCAGGCATCA 60.036 50.000 30.83 8.02 0.00 3.07
4626 9089 1.086696 AATACACGTGTGCAGGCATC 58.913 50.000 30.83 0.00 0.00 3.91
4627 9090 1.533625 AAATACACGTGTGCAGGCAT 58.466 45.000 30.83 12.46 0.00 4.40
4628 9091 1.001924 CAAAATACACGTGTGCAGGCA 60.002 47.619 30.83 10.44 0.00 4.75
4629 9092 1.685302 CAAAATACACGTGTGCAGGC 58.315 50.000 30.83 0.00 0.00 4.85
4630 9093 1.001924 TGCAAAATACACGTGTGCAGG 60.002 47.619 30.83 16.44 40.14 4.85
4631 9094 2.397777 TGCAAAATACACGTGTGCAG 57.602 45.000 30.83 16.06 40.14 4.41
4632 9095 2.851805 TTGCAAAATACACGTGTGCA 57.148 40.000 30.83 26.12 43.12 4.57
4633 9096 2.098116 CGTTTGCAAAATACACGTGTGC 60.098 45.455 30.83 23.88 35.75 4.57
4634 9097 2.465839 CCGTTTGCAAAATACACGTGTG 59.534 45.455 30.83 14.81 0.00 3.82
4635 9098 2.541999 CCCGTTTGCAAAATACACGTGT 60.542 45.455 26.52 26.52 0.00 4.49
4636 9099 2.047769 CCCGTTTGCAAAATACACGTG 58.952 47.619 14.67 15.48 0.00 4.49
4637 9100 1.600912 GCCCGTTTGCAAAATACACGT 60.601 47.619 14.67 0.00 0.00 4.49
4638 9101 1.056869 GCCCGTTTGCAAAATACACG 58.943 50.000 14.67 13.40 0.00 4.49
4639 9102 1.056869 CGCCCGTTTGCAAAATACAC 58.943 50.000 14.67 0.14 0.00 2.90
4640 9103 0.664767 GCGCCCGTTTGCAAAATACA 60.665 50.000 14.67 0.00 0.00 2.29
4641 9104 0.388006 AGCGCCCGTTTGCAAAATAC 60.388 50.000 14.67 0.98 0.00 1.89
4642 9105 0.387878 CAGCGCCCGTTTGCAAAATA 60.388 50.000 14.67 0.00 0.00 1.40
4643 9106 1.664333 CAGCGCCCGTTTGCAAAAT 60.664 52.632 14.67 0.00 0.00 1.82
4644 9107 2.279120 CAGCGCCCGTTTGCAAAA 60.279 55.556 14.67 0.00 0.00 2.44
4645 9108 4.940593 GCAGCGCCCGTTTGCAAA 62.941 61.111 8.05 8.05 37.75 3.68
4678 9141 2.215942 AAAATCTATATGGGCCGGCC 57.784 50.000 38.57 38.57 0.00 6.13
4695 9158 7.092846 TGGGGGATTAAAAACACAGAAGAAAAA 60.093 33.333 0.00 0.00 0.00 1.94
4696 9159 6.384305 TGGGGGATTAAAAACACAGAAGAAAA 59.616 34.615 0.00 0.00 0.00 2.29
4697 9160 5.900123 TGGGGGATTAAAAACACAGAAGAAA 59.100 36.000 0.00 0.00 0.00 2.52
4698 9161 5.459505 TGGGGGATTAAAAACACAGAAGAA 58.540 37.500 0.00 0.00 0.00 2.52
4699 9162 5.068215 TGGGGGATTAAAAACACAGAAGA 57.932 39.130 0.00 0.00 0.00 2.87
4700 9163 5.799827 TTGGGGGATTAAAAACACAGAAG 57.200 39.130 0.00 0.00 0.00 2.85
4701 9164 6.561519 TTTTGGGGGATTAAAAACACAGAA 57.438 33.333 0.00 0.00 0.00 3.02
4702 9165 6.561519 TTTTTGGGGGATTAAAAACACAGA 57.438 33.333 0.00 0.00 32.57 3.41
4703 9166 6.293900 GCATTTTTGGGGGATTAAAAACACAG 60.294 38.462 0.00 0.00 38.23 3.66
4704 9167 5.532779 GCATTTTTGGGGGATTAAAAACACA 59.467 36.000 0.00 0.00 38.23 3.72
4705 9168 5.334491 CGCATTTTTGGGGGATTAAAAACAC 60.334 40.000 0.00 0.00 38.23 3.32
4706 9169 4.757149 CGCATTTTTGGGGGATTAAAAACA 59.243 37.500 0.00 0.00 38.23 2.83
4707 9170 4.378978 GCGCATTTTTGGGGGATTAAAAAC 60.379 41.667 0.30 0.00 38.23 2.43
4708 9171 3.753797 GCGCATTTTTGGGGGATTAAAAA 59.246 39.130 0.30 0.00 39.30 1.94
4709 9172 3.244561 TGCGCATTTTTGGGGGATTAAAA 60.245 39.130 5.66 0.00 0.00 1.52
4710 9173 2.303022 TGCGCATTTTTGGGGGATTAAA 59.697 40.909 5.66 0.00 0.00 1.52
4711 9174 1.902508 TGCGCATTTTTGGGGGATTAA 59.097 42.857 5.66 0.00 0.00 1.40
4712 9175 1.205893 GTGCGCATTTTTGGGGGATTA 59.794 47.619 15.91 0.00 0.00 1.75
4713 9176 0.036483 GTGCGCATTTTTGGGGGATT 60.036 50.000 15.91 0.00 0.00 3.01
4714 9177 1.190833 TGTGCGCATTTTTGGGGGAT 61.191 50.000 15.91 0.00 0.00 3.85
4715 9178 1.834378 TGTGCGCATTTTTGGGGGA 60.834 52.632 15.91 0.00 0.00 4.81
4716 9179 1.667510 GTGTGCGCATTTTTGGGGG 60.668 57.895 15.91 0.00 0.00 5.40
4717 9180 0.249826 AAGTGTGCGCATTTTTGGGG 60.250 50.000 15.91 0.00 0.00 4.96
4718 9181 0.860533 CAAGTGTGCGCATTTTTGGG 59.139 50.000 15.91 0.00 0.00 4.12
4719 9182 1.258458 CACAAGTGTGCGCATTTTTGG 59.742 47.619 24.59 13.38 39.39 3.28
4720 9183 1.258458 CCACAAGTGTGCGCATTTTTG 59.742 47.619 15.91 19.65 44.34 2.44
4721 9184 1.134848 ACCACAAGTGTGCGCATTTTT 60.135 42.857 15.91 5.29 44.34 1.94
4722 9185 0.459489 ACCACAAGTGTGCGCATTTT 59.541 45.000 15.91 5.70 44.34 1.82
4723 9186 0.248990 CACCACAAGTGTGCGCATTT 60.249 50.000 15.91 1.75 44.34 2.32
4724 9187 1.359833 CACCACAAGTGTGCGCATT 59.640 52.632 15.91 0.00 44.34 3.56
4725 9188 3.033184 CACCACAAGTGTGCGCAT 58.967 55.556 15.91 0.00 44.34 4.73
4729 9192 7.852192 TTGGTTTGAATCACCACAAGTGTGC 62.852 44.000 5.89 0.00 44.34 4.57
4730 9193 4.381398 TTGGTTTGAATCACCACAAGTGTG 60.381 41.667 4.38 4.38 44.34 3.82
4731 9194 3.766591 TTGGTTTGAATCACCACAAGTGT 59.233 39.130 0.00 0.00 44.34 3.55
4732 9195 4.111916 GTTGGTTTGAATCACCACAAGTG 58.888 43.478 0.00 0.00 44.34 3.16
4733 9196 3.181491 CGTTGGTTTGAATCACCACAAGT 60.181 43.478 0.00 0.00 44.34 3.16
4734 9197 3.066064 TCGTTGGTTTGAATCACCACAAG 59.934 43.478 0.00 0.00 44.34 3.16
4735 9198 3.017442 TCGTTGGTTTGAATCACCACAA 58.983 40.909 0.00 0.00 44.34 3.33
4736 9199 2.356382 GTCGTTGGTTTGAATCACCACA 59.644 45.455 0.00 0.00 44.34 4.17
4737 9200 2.287368 GGTCGTTGGTTTGAATCACCAC 60.287 50.000 0.00 0.00 44.34 4.16
4738 9201 1.950909 GGTCGTTGGTTTGAATCACCA 59.049 47.619 0.00 0.00 42.90 4.17
4739 9202 2.225727 GAGGTCGTTGGTTTGAATCACC 59.774 50.000 0.00 0.00 34.52 4.02
4740 9203 2.225727 GGAGGTCGTTGGTTTGAATCAC 59.774 50.000 0.00 0.00 0.00 3.06
4741 9204 2.500229 GGAGGTCGTTGGTTTGAATCA 58.500 47.619 0.00 0.00 0.00 2.57
4742 9205 1.810755 GGGAGGTCGTTGGTTTGAATC 59.189 52.381 0.00 0.00 0.00 2.52
4743 9206 1.423921 AGGGAGGTCGTTGGTTTGAAT 59.576 47.619 0.00 0.00 0.00 2.57
4744 9207 0.841289 AGGGAGGTCGTTGGTTTGAA 59.159 50.000 0.00 0.00 0.00 2.69
4745 9208 0.395312 GAGGGAGGTCGTTGGTTTGA 59.605 55.000 0.00 0.00 0.00 2.69
4746 9209 0.396811 AGAGGGAGGTCGTTGGTTTG 59.603 55.000 0.00 0.00 0.00 2.93
4747 9210 1.071857 GAAGAGGGAGGTCGTTGGTTT 59.928 52.381 0.00 0.00 0.00 3.27
4748 9211 0.685660 GAAGAGGGAGGTCGTTGGTT 59.314 55.000 0.00 0.00 0.00 3.67
4749 9212 0.471211 TGAAGAGGGAGGTCGTTGGT 60.471 55.000 0.00 0.00 0.00 3.67
4750 9213 0.685097 TTGAAGAGGGAGGTCGTTGG 59.315 55.000 0.00 0.00 0.00 3.77
4751 9214 2.770164 ATTGAAGAGGGAGGTCGTTG 57.230 50.000 0.00 0.00 0.00 4.10
4752 9215 2.165845 CGTATTGAAGAGGGAGGTCGTT 59.834 50.000 0.00 0.00 0.00 3.85
4753 9216 1.749634 CGTATTGAAGAGGGAGGTCGT 59.250 52.381 0.00 0.00 0.00 4.34
4754 9217 1.067212 CCGTATTGAAGAGGGAGGTCG 59.933 57.143 0.00 0.00 0.00 4.79
4755 9218 2.385803 TCCGTATTGAAGAGGGAGGTC 58.614 52.381 0.00 0.00 0.00 3.85
4756 9219 2.544844 TCCGTATTGAAGAGGGAGGT 57.455 50.000 0.00 0.00 0.00 3.85
4757 9220 3.495100 CCAATCCGTATTGAAGAGGGAGG 60.495 52.174 7.35 0.55 44.50 4.30
4758 9221 3.134804 ACCAATCCGTATTGAAGAGGGAG 59.865 47.826 7.35 0.00 44.50 4.30
4759 9222 3.112263 ACCAATCCGTATTGAAGAGGGA 58.888 45.455 3.56 3.56 44.50 4.20
4760 9223 3.206150 CACCAATCCGTATTGAAGAGGG 58.794 50.000 1.76 0.00 44.50 4.30
4761 9224 2.614057 GCACCAATCCGTATTGAAGAGG 59.386 50.000 1.76 0.00 44.50 3.69
4762 9225 3.270027 TGCACCAATCCGTATTGAAGAG 58.730 45.455 1.76 0.00 44.50 2.85
4763 9226 3.342377 TGCACCAATCCGTATTGAAGA 57.658 42.857 1.76 0.00 44.50 2.87
4764 9227 3.427503 GGTTGCACCAATCCGTATTGAAG 60.428 47.826 1.76 0.00 44.50 3.02
4765 9228 2.490115 GGTTGCACCAATCCGTATTGAA 59.510 45.455 1.76 0.00 44.50 2.69
4766 9229 2.088423 GGTTGCACCAATCCGTATTGA 58.912 47.619 1.76 0.00 44.50 2.57
4767 9230 2.559998 GGTTGCACCAATCCGTATTG 57.440 50.000 0.00 0.00 41.90 1.90
4779 9242 1.140804 GTTGGTGGTGTGGTTGCAC 59.859 57.895 0.00 0.00 38.56 4.57
4780 9243 2.055042 GGTTGGTGGTGTGGTTGCA 61.055 57.895 0.00 0.00 0.00 4.08
4781 9244 2.015227 CTGGTTGGTGGTGTGGTTGC 62.015 60.000 0.00 0.00 0.00 4.17
4782 9245 2.015227 GCTGGTTGGTGGTGTGGTTG 62.015 60.000 0.00 0.00 0.00 3.77
4783 9246 1.756561 GCTGGTTGGTGGTGTGGTT 60.757 57.895 0.00 0.00 0.00 3.67
4784 9247 2.123897 GCTGGTTGGTGGTGTGGT 60.124 61.111 0.00 0.00 0.00 4.16
4785 9248 2.912025 GGCTGGTTGGTGGTGTGG 60.912 66.667 0.00 0.00 0.00 4.17
4786 9249 3.286751 CGGCTGGTTGGTGGTGTG 61.287 66.667 0.00 0.00 0.00 3.82
4787 9250 4.579384 CCGGCTGGTTGGTGGTGT 62.579 66.667 2.29 0.00 0.00 4.16
4788 9251 3.567579 ATCCGGCTGGTTGGTGGTG 62.568 63.158 12.43 0.00 36.30 4.17
4789 9252 3.256960 ATCCGGCTGGTTGGTGGT 61.257 61.111 12.43 0.00 36.30 4.16
4790 9253 2.438434 GATCCGGCTGGTTGGTGG 60.438 66.667 12.43 0.00 36.30 4.61
4791 9254 1.746615 CAGATCCGGCTGGTTGGTG 60.747 63.158 12.43 1.52 36.30 4.17
4792 9255 2.671070 CAGATCCGGCTGGTTGGT 59.329 61.111 12.43 0.00 36.30 3.67
4798 9261 4.336889 TCTAATTAACCAGATCCGGCTG 57.663 45.455 0.00 0.00 35.66 4.85
4799 9262 4.444449 GGTTCTAATTAACCAGATCCGGCT 60.444 45.833 0.00 0.00 46.85 5.52
4800 9263 3.813724 GGTTCTAATTAACCAGATCCGGC 59.186 47.826 0.00 0.00 46.85 6.13
4843 9306 9.877222 AAGAATAAAAGGAAGGAAAGGTTCTAA 57.123 29.630 0.00 0.00 0.00 2.10
4844 9307 9.877222 AAAGAATAAAAGGAAGGAAAGGTTCTA 57.123 29.630 0.00 0.00 0.00 2.10
4845 9308 8.783660 AAAGAATAAAAGGAAGGAAAGGTTCT 57.216 30.769 0.00 0.00 0.00 3.01
4846 9309 8.861086 AGAAAGAATAAAAGGAAGGAAAGGTTC 58.139 33.333 0.00 0.00 0.00 3.62
4847 9310 8.783660 AGAAAGAATAAAAGGAAGGAAAGGTT 57.216 30.769 0.00 0.00 0.00 3.50
4848 9311 8.783660 AAGAAAGAATAAAAGGAAGGAAAGGT 57.216 30.769 0.00 0.00 0.00 3.50
4852 9315 8.357402 CGGAAAAGAAAGAATAAAAGGAAGGAA 58.643 33.333 0.00 0.00 0.00 3.36
4853 9316 7.504574 ACGGAAAAGAAAGAATAAAAGGAAGGA 59.495 33.333 0.00 0.00 0.00 3.36
4854 9317 7.658261 ACGGAAAAGAAAGAATAAAAGGAAGG 58.342 34.615 0.00 0.00 0.00 3.46
4855 9318 9.529325 AAACGGAAAAGAAAGAATAAAAGGAAG 57.471 29.630 0.00 0.00 0.00 3.46
4856 9319 9.878667 AAAACGGAAAAGAAAGAATAAAAGGAA 57.121 25.926 0.00 0.00 0.00 3.36
4857 9320 9.524106 GAAAACGGAAAAGAAAGAATAAAAGGA 57.476 29.630 0.00 0.00 0.00 3.36
4858 9321 9.529325 AGAAAACGGAAAAGAAAGAATAAAAGG 57.471 29.630 0.00 0.00 0.00 3.11
4864 9327 9.653287 AAAAAGAGAAAACGGAAAAGAAAGAAT 57.347 25.926 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.