Multiple sequence alignment - TraesCS7A01G333000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G333000 chr7A 100.000 3308 0 0 1 3308 486179413 486176106 0.000000e+00 6109.0
1 TraesCS7A01G333000 chr7A 89.066 1253 121 8 1280 2529 486158456 486157217 0.000000e+00 1541.0
2 TraesCS7A01G333000 chr7A 91.071 112 10 0 1175 1286 486172075 486171964 5.720000e-33 152.0
3 TraesCS7A01G333000 chr7B 90.752 2141 167 21 1175 3308 453122968 453125084 0.000000e+00 2828.0
4 TraesCS7A01G333000 chr7B 94.495 1417 70 2 1175 2589 453117943 453119353 0.000000e+00 2178.0
5 TraesCS7A01G333000 chr7B 83.799 537 41 17 625 1139 453117359 453117871 5.000000e-128 468.0
6 TraesCS7A01G333000 chr7B 89.583 192 20 0 2622 2813 453119358 453119549 9.170000e-61 244.0
7 TraesCS7A01G333000 chr7B 95.918 49 2 0 1175 1223 453122863 453122911 2.740000e-11 80.5
8 TraesCS7A01G333000 chr7D 93.579 1355 79 3 1175 2527 436478550 436479898 0.000000e+00 2013.0
9 TraesCS7A01G333000 chr7D 89.077 1355 127 10 1175 2526 436497176 436498512 0.000000e+00 1663.0
10 TraesCS7A01G333000 chr7D 94.247 956 48 2 1569 2524 436491409 436492357 0.000000e+00 1454.0
11 TraesCS7A01G333000 chr7D 95.387 542 20 4 2654 3194 436492418 436492955 0.000000e+00 857.0
12 TraesCS7A01G333000 chr7D 90.909 341 29 2 1175 1514 436491063 436491402 1.080000e-124 457.0
13 TraesCS7A01G333000 chr7D 87.065 402 32 8 758 1139 436478077 436478478 1.410000e-118 436.0
14 TraesCS7A01G333000 chr7D 87.847 288 23 6 435 718 436477800 436478079 8.850000e-86 327.0
15 TraesCS7A01G333000 chr7D 96.032 126 2 2 3186 3308 436493377 436493502 5.600000e-48 202.0
16 TraesCS7A01G333000 chr7D 79.670 182 29 6 5 183 203407800 203407976 1.250000e-24 124.0
17 TraesCS7A01G333000 chr7D 89.610 77 6 2 2493 2568 436479897 436479972 2.720000e-16 97.1
18 TraesCS7A01G333000 chr7D 93.878 49 3 0 1175 1223 436497071 436497119 1.270000e-09 75.0
19 TraesCS7A01G333000 chr7D 97.619 42 1 0 392 433 436477733 436477774 4.580000e-09 73.1
20 TraesCS7A01G333000 chr7D 97.436 39 0 1 2566 2604 602187641 602187678 7.660000e-07 65.8
21 TraesCS7A01G333000 chr7D 94.444 36 1 1 5 39 194281982 194281947 2.000000e-03 54.7
22 TraesCS7A01G333000 chr6A 80.506 395 35 19 2840 3205 100675148 100674767 7.040000e-67 265.0
23 TraesCS7A01G333000 chr6A 85.638 188 18 8 3054 3240 100665048 100664869 4.360000e-44 189.0
24 TraesCS7A01G333000 chr6A 91.743 109 8 1 2746 2853 100643687 100643795 2.060000e-32 150.0
25 TraesCS7A01G333000 chr6A 78.212 179 27 8 2796 2967 100577380 100577553 1.620000e-18 104.0
26 TraesCS7A01G333000 chr6D 78.547 289 30 19 2811 3088 83256625 83256892 9.500000e-36 161.0
27 TraesCS7A01G333000 chr6D 84.000 150 10 6 2820 2967 83444543 83444406 7.450000e-27 132.0
28 TraesCS7A01G333000 chr6D 78.947 171 26 9 3035 3205 83444328 83444168 1.260000e-19 108.0
29 TraesCS7A01G333000 chr6D 87.912 91 8 1 3160 3250 83430186 83430099 1.620000e-18 104.0
30 TraesCS7A01G333000 chr6D 97.561 41 0 1 2566 2606 24231458 24231419 5.920000e-08 69.4
31 TraesCS7A01G333000 chr6B 82.234 197 20 11 3054 3250 159138493 159138312 4.420000e-34 156.0
32 TraesCS7A01G333000 chr4B 82.051 117 17 3 56 172 513722438 513722550 2.720000e-16 97.1
33 TraesCS7A01G333000 chr4B 95.122 41 1 1 2566 2606 285595209 285595170 2.760000e-06 63.9
34 TraesCS7A01G333000 chr1B 84.444 90 7 6 2566 2655 593924374 593924292 7.610000e-12 82.4
35 TraesCS7A01G333000 chr3B 97.500 40 0 1 2566 2605 377871404 377871366 2.130000e-07 67.6
36 TraesCS7A01G333000 chr3A 97.500 40 0 1 2566 2605 374433105 374433143 2.130000e-07 67.6
37 TraesCS7A01G333000 chr3D 92.308 39 2 1 2566 2603 477826580 477826618 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G333000 chr7A 486176106 486179413 3307 True 6109.000000 6109 100.0000 1 3308 1 chr7A.!!$R3 3307
1 TraesCS7A01G333000 chr7A 486157217 486158456 1239 True 1541.000000 1541 89.0660 1280 2529 1 chr7A.!!$R1 1249
2 TraesCS7A01G333000 chr7B 453117359 453125084 7725 False 1159.700000 2828 90.9094 625 3308 5 chr7B.!!$F1 2683
3 TraesCS7A01G333000 chr7D 436491063 436498512 7449 False 784.666667 1663 93.2550 1175 3308 6 chr7D.!!$F4 2133
4 TraesCS7A01G333000 chr7D 436477733 436479972 2239 False 589.240000 2013 91.1440 392 2568 5 chr7D.!!$F3 2176

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 381 0.029300 CCCGTATGCATTTCCGCAAG 59.971 55.0 3.54 0.00 46.87 4.01 F
974 1043 0.038166 TGCAAAACCTCAGCCCTAGG 59.962 55.0 0.06 0.06 40.20 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1702 8371 0.877071 CCATTGTCCAGCAGTGACAC 59.123 55.0 0.00 0.0 42.13 3.67 R
2714 9421 0.110328 CTACTACCGGATAGTGCGCG 60.110 60.0 20.36 0.0 44.30 6.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.403252 CCGAGGATGGCAAGTTTAGT 57.597 50.000 0.00 0.00 0.00 2.24
23 24 2.711542 CCGAGGATGGCAAGTTTAGTT 58.288 47.619 0.00 0.00 0.00 2.24
24 25 2.678336 CCGAGGATGGCAAGTTTAGTTC 59.322 50.000 0.00 0.00 0.00 3.01
25 26 3.334691 CGAGGATGGCAAGTTTAGTTCA 58.665 45.455 0.00 0.00 0.00 3.18
26 27 3.125316 CGAGGATGGCAAGTTTAGTTCAC 59.875 47.826 0.00 0.00 0.00 3.18
27 28 3.074412 AGGATGGCAAGTTTAGTTCACG 58.926 45.455 0.00 0.00 0.00 4.35
28 29 3.071479 GGATGGCAAGTTTAGTTCACGA 58.929 45.455 0.00 0.00 0.00 4.35
29 30 3.125316 GGATGGCAAGTTTAGTTCACGAG 59.875 47.826 0.00 0.00 0.00 4.18
30 31 1.871039 TGGCAAGTTTAGTTCACGAGC 59.129 47.619 0.00 0.00 0.00 5.03
31 32 1.871039 GGCAAGTTTAGTTCACGAGCA 59.129 47.619 0.00 0.00 0.00 4.26
32 33 2.484264 GGCAAGTTTAGTTCACGAGCAT 59.516 45.455 0.00 0.00 0.00 3.79
33 34 3.682858 GGCAAGTTTAGTTCACGAGCATA 59.317 43.478 0.00 0.00 0.00 3.14
34 35 4.435651 GGCAAGTTTAGTTCACGAGCATAC 60.436 45.833 0.00 0.00 0.00 2.39
35 36 4.151689 GCAAGTTTAGTTCACGAGCATACA 59.848 41.667 0.00 0.00 0.00 2.29
36 37 5.333798 GCAAGTTTAGTTCACGAGCATACAA 60.334 40.000 0.00 0.00 0.00 2.41
37 38 6.655062 CAAGTTTAGTTCACGAGCATACAAA 58.345 36.000 0.00 0.00 0.00 2.83
38 39 7.298122 CAAGTTTAGTTCACGAGCATACAAAT 58.702 34.615 0.00 0.00 0.00 2.32
39 40 7.435068 AGTTTAGTTCACGAGCATACAAATT 57.565 32.000 0.00 0.00 0.00 1.82
40 41 7.519002 AGTTTAGTTCACGAGCATACAAATTC 58.481 34.615 0.00 0.00 0.00 2.17
41 42 4.584029 AGTTCACGAGCATACAAATTCG 57.416 40.909 0.00 0.00 38.88 3.34
42 43 3.091417 GTTCACGAGCATACAAATTCGC 58.909 45.455 0.00 0.00 36.58 4.70
43 44 1.663643 TCACGAGCATACAAATTCGCC 59.336 47.619 0.00 0.00 36.58 5.54
44 45 1.665679 CACGAGCATACAAATTCGCCT 59.334 47.619 0.00 0.00 36.58 5.52
45 46 1.933853 ACGAGCATACAAATTCGCCTC 59.066 47.619 0.00 0.00 36.58 4.70
46 47 1.933181 CGAGCATACAAATTCGCCTCA 59.067 47.619 0.00 0.00 0.00 3.86
47 48 2.351418 CGAGCATACAAATTCGCCTCAA 59.649 45.455 0.00 0.00 0.00 3.02
48 49 3.181511 CGAGCATACAAATTCGCCTCAAA 60.182 43.478 0.00 0.00 0.00 2.69
49 50 4.496341 CGAGCATACAAATTCGCCTCAAAT 60.496 41.667 0.00 0.00 0.00 2.32
50 51 5.329035 AGCATACAAATTCGCCTCAAATT 57.671 34.783 0.00 0.00 0.00 1.82
51 52 5.723295 AGCATACAAATTCGCCTCAAATTT 58.277 33.333 0.00 0.00 36.91 1.82
52 53 6.165577 AGCATACAAATTCGCCTCAAATTTT 58.834 32.000 0.00 0.00 34.84 1.82
53 54 6.650390 AGCATACAAATTCGCCTCAAATTTTT 59.350 30.769 0.00 0.00 34.84 1.94
79 80 4.320608 TTTGGTCAGGAAATTGTCTTGC 57.679 40.909 0.00 0.00 33.38 4.01
80 81 3.228188 TGGTCAGGAAATTGTCTTGCT 57.772 42.857 0.00 0.00 33.38 3.91
81 82 3.565307 TGGTCAGGAAATTGTCTTGCTT 58.435 40.909 0.00 0.00 33.38 3.91
82 83 3.318839 TGGTCAGGAAATTGTCTTGCTTG 59.681 43.478 0.00 0.00 33.38 4.01
83 84 3.311966 GTCAGGAAATTGTCTTGCTTGC 58.688 45.455 0.00 0.00 33.38 4.01
84 85 2.957680 TCAGGAAATTGTCTTGCTTGCA 59.042 40.909 0.00 0.00 33.38 4.08
85 86 3.384146 TCAGGAAATTGTCTTGCTTGCAA 59.616 39.130 7.83 7.83 33.38 4.08
86 87 4.121317 CAGGAAATTGTCTTGCTTGCAAA 58.879 39.130 9.39 0.00 0.00 3.68
120 121 6.737118 CCATTTTTGGCCCAATATAAATTGC 58.263 36.000 0.00 0.00 41.06 3.56
121 122 6.238981 CCATTTTTGGCCCAATATAAATTGCC 60.239 38.462 0.00 0.00 41.06 4.52
122 123 5.441718 TTTTGGCCCAATATAAATTGCCA 57.558 34.783 0.00 0.00 40.54 4.92
123 124 5.643421 TTTGGCCCAATATAAATTGCCAT 57.357 34.783 0.00 0.00 41.36 4.40
124 125 4.620589 TGGCCCAATATAAATTGCCATG 57.379 40.909 0.00 0.00 38.55 3.66
125 126 4.229639 TGGCCCAATATAAATTGCCATGA 58.770 39.130 0.00 0.00 38.55 3.07
126 127 4.657504 TGGCCCAATATAAATTGCCATGAA 59.342 37.500 0.00 0.00 38.55 2.57
127 128 5.131642 TGGCCCAATATAAATTGCCATGAAA 59.868 36.000 0.00 0.00 38.55 2.69
128 129 6.060788 GGCCCAATATAAATTGCCATGAAAA 58.939 36.000 0.00 0.00 41.06 2.29
129 130 6.545298 GGCCCAATATAAATTGCCATGAAAAA 59.455 34.615 0.00 0.00 41.06 1.94
130 131 7.416817 GCCCAATATAAATTGCCATGAAAAAC 58.583 34.615 0.00 0.00 41.06 2.43
131 132 7.629130 CCCAATATAAATTGCCATGAAAAACG 58.371 34.615 0.00 0.00 41.06 3.60
132 133 7.125113 CCAATATAAATTGCCATGAAAAACGC 58.875 34.615 0.00 0.00 41.06 4.84
133 134 7.011295 CCAATATAAATTGCCATGAAAAACGCT 59.989 33.333 0.00 0.00 41.06 5.07
134 135 7.698836 ATATAAATTGCCATGAAAAACGCTC 57.301 32.000 0.00 0.00 0.00 5.03
135 136 1.981254 ATTGCCATGAAAAACGCTCG 58.019 45.000 0.00 0.00 0.00 5.03
136 137 0.947960 TTGCCATGAAAAACGCTCGA 59.052 45.000 0.00 0.00 0.00 4.04
137 138 1.164411 TGCCATGAAAAACGCTCGAT 58.836 45.000 0.00 0.00 0.00 3.59
138 139 1.539388 TGCCATGAAAAACGCTCGATT 59.461 42.857 0.00 0.00 0.00 3.34
139 140 2.030363 TGCCATGAAAAACGCTCGATTT 60.030 40.909 0.00 0.00 0.00 2.17
140 141 2.342354 GCCATGAAAAACGCTCGATTTG 59.658 45.455 0.00 0.00 0.00 2.32
141 142 2.342354 CCATGAAAAACGCTCGATTTGC 59.658 45.455 0.00 0.00 0.00 3.68
142 143 2.044888 TGAAAAACGCTCGATTTGCC 57.955 45.000 0.00 0.00 0.00 4.52
143 144 1.335182 TGAAAAACGCTCGATTTGCCA 59.665 42.857 0.00 0.00 0.00 4.92
144 145 2.030363 TGAAAAACGCTCGATTTGCCAT 60.030 40.909 0.00 0.00 0.00 4.40
145 146 1.981254 AAAACGCTCGATTTGCCATG 58.019 45.000 0.00 0.00 0.00 3.66
146 147 1.164411 AAACGCTCGATTTGCCATGA 58.836 45.000 0.00 0.00 0.00 3.07
147 148 0.729116 AACGCTCGATTTGCCATGAG 59.271 50.000 0.00 0.00 0.00 2.90
148 149 0.391661 ACGCTCGATTTGCCATGAGT 60.392 50.000 0.00 0.00 0.00 3.41
149 150 1.134818 ACGCTCGATTTGCCATGAGTA 60.135 47.619 0.00 0.00 0.00 2.59
150 151 1.933181 CGCTCGATTTGCCATGAGTAA 59.067 47.619 0.00 0.00 0.00 2.24
151 152 2.351418 CGCTCGATTTGCCATGAGTAAA 59.649 45.455 0.00 0.00 34.36 2.01
152 153 3.181511 CGCTCGATTTGCCATGAGTAAAA 60.182 43.478 0.00 0.00 33.51 1.52
153 154 4.671508 CGCTCGATTTGCCATGAGTAAAAA 60.672 41.667 0.00 0.00 33.51 1.94
154 155 5.343249 GCTCGATTTGCCATGAGTAAAAAT 58.657 37.500 0.00 0.00 33.51 1.82
155 156 5.456822 GCTCGATTTGCCATGAGTAAAAATC 59.543 40.000 0.00 1.95 33.51 2.17
156 157 6.678900 GCTCGATTTGCCATGAGTAAAAATCT 60.679 38.462 0.00 0.00 35.87 2.40
157 158 7.467267 GCTCGATTTGCCATGAGTAAAAATCTA 60.467 37.037 0.00 0.00 35.87 1.98
158 159 8.275015 TCGATTTGCCATGAGTAAAAATCTAA 57.725 30.769 0.00 0.00 35.87 2.10
159 160 8.181573 TCGATTTGCCATGAGTAAAAATCTAAC 58.818 33.333 0.00 0.00 35.87 2.34
160 161 7.164171 CGATTTGCCATGAGTAAAAATCTAACG 59.836 37.037 0.00 0.00 35.87 3.18
161 162 6.811253 TTGCCATGAGTAAAAATCTAACGT 57.189 33.333 0.00 0.00 0.00 3.99
162 163 6.811253 TGCCATGAGTAAAAATCTAACGTT 57.189 33.333 5.88 5.88 0.00 3.99
163 164 7.908827 TGCCATGAGTAAAAATCTAACGTTA 57.091 32.000 7.94 7.94 0.00 3.18
164 165 7.970384 TGCCATGAGTAAAAATCTAACGTTAG 58.030 34.615 26.13 26.13 0.00 2.34
165 166 7.820386 TGCCATGAGTAAAAATCTAACGTTAGA 59.180 33.333 33.62 33.62 43.35 2.10
179 180 9.708092 ATCTAACGTTAGATATTTAGCCTTTCC 57.292 33.333 37.47 0.00 45.93 3.13
180 181 8.921205 TCTAACGTTAGATATTTAGCCTTTCCT 58.079 33.333 29.57 0.00 34.99 3.36
183 184 9.490379 AACGTTAGATATTTAGCCTTTCCTATG 57.510 33.333 0.00 0.00 0.00 2.23
184 185 8.648693 ACGTTAGATATTTAGCCTTTCCTATGT 58.351 33.333 0.00 0.00 0.00 2.29
185 186 9.490379 CGTTAGATATTTAGCCTTTCCTATGTT 57.510 33.333 0.00 0.00 0.00 2.71
197 198 8.981659 AGCCTTTCCTATGTTTTATTTTATGCT 58.018 29.630 0.00 0.00 0.00 3.79
220 221 9.463443 TGCTAAACAAAAGAAGAAGAAAATAGC 57.537 29.630 0.00 0.00 0.00 2.97
221 222 9.463443 GCTAAACAAAAGAAGAAGAAAATAGCA 57.537 29.630 0.00 0.00 32.11 3.49
224 225 9.822185 AAACAAAAGAAGAAGAAAATAGCATGT 57.178 25.926 0.00 0.00 0.00 3.21
227 228 9.565213 CAAAAGAAGAAGAAAATAGCATGTAGG 57.435 33.333 0.00 0.00 0.00 3.18
228 229 9.520515 AAAAGAAGAAGAAAATAGCATGTAGGA 57.479 29.630 0.00 0.00 0.00 2.94
229 230 8.499403 AAGAAGAAGAAAATAGCATGTAGGAC 57.501 34.615 0.00 0.00 0.00 3.85
230 231 7.051000 AGAAGAAGAAAATAGCATGTAGGACC 58.949 38.462 0.00 0.00 0.00 4.46
231 232 6.313519 AGAAGAAAATAGCATGTAGGACCA 57.686 37.500 0.00 0.00 0.00 4.02
232 233 6.721318 AGAAGAAAATAGCATGTAGGACCAA 58.279 36.000 0.00 0.00 0.00 3.67
233 234 6.825721 AGAAGAAAATAGCATGTAGGACCAAG 59.174 38.462 0.00 0.00 0.00 3.61
234 235 4.884164 AGAAAATAGCATGTAGGACCAAGC 59.116 41.667 0.00 0.00 0.00 4.01
235 236 3.931907 AATAGCATGTAGGACCAAGCA 57.068 42.857 0.00 0.00 31.72 3.91
236 237 3.931907 ATAGCATGTAGGACCAAGCAA 57.068 42.857 0.00 0.00 31.72 3.91
237 238 2.584835 AGCATGTAGGACCAAGCAAA 57.415 45.000 0.00 0.00 31.72 3.68
238 239 2.875296 AGCATGTAGGACCAAGCAAAA 58.125 42.857 0.00 0.00 31.72 2.44
239 240 3.230134 AGCATGTAGGACCAAGCAAAAA 58.770 40.909 0.00 0.00 31.72 1.94
240 241 3.834231 AGCATGTAGGACCAAGCAAAAAT 59.166 39.130 0.00 0.00 31.72 1.82
241 242 3.928375 GCATGTAGGACCAAGCAAAAATG 59.072 43.478 0.00 0.00 0.00 2.32
242 243 4.321899 GCATGTAGGACCAAGCAAAAATGA 60.322 41.667 0.00 0.00 0.00 2.57
243 244 5.782047 CATGTAGGACCAAGCAAAAATGAA 58.218 37.500 0.00 0.00 0.00 2.57
244 245 5.860941 TGTAGGACCAAGCAAAAATGAAA 57.139 34.783 0.00 0.00 0.00 2.69
245 246 6.418057 TGTAGGACCAAGCAAAAATGAAAT 57.582 33.333 0.00 0.00 0.00 2.17
246 247 7.531857 TGTAGGACCAAGCAAAAATGAAATA 57.468 32.000 0.00 0.00 0.00 1.40
247 248 7.957002 TGTAGGACCAAGCAAAAATGAAATAA 58.043 30.769 0.00 0.00 0.00 1.40
248 249 8.424918 TGTAGGACCAAGCAAAAATGAAATAAA 58.575 29.630 0.00 0.00 0.00 1.40
249 250 9.435688 GTAGGACCAAGCAAAAATGAAATAAAT 57.564 29.630 0.00 0.00 0.00 1.40
251 252 9.657419 AGGACCAAGCAAAAATGAAATAAATAG 57.343 29.630 0.00 0.00 0.00 1.73
252 253 9.435688 GGACCAAGCAAAAATGAAATAAATAGT 57.564 29.630 0.00 0.00 0.00 2.12
254 255 9.777297 ACCAAGCAAAAATGAAATAAATAGTGT 57.223 25.926 0.00 0.00 0.00 3.55
276 277 8.813643 GTGTATGTAGACACTTGGGATATTAC 57.186 38.462 2.74 0.00 45.21 1.89
277 278 8.639761 GTGTATGTAGACACTTGGGATATTACT 58.360 37.037 2.74 0.00 45.21 2.24
278 279 9.209048 TGTATGTAGACACTTGGGATATTACTT 57.791 33.333 0.00 0.00 0.00 2.24
281 282 8.834004 TGTAGACACTTGGGATATTACTTACT 57.166 34.615 0.00 0.00 0.00 2.24
282 283 9.263446 TGTAGACACTTGGGATATTACTTACTT 57.737 33.333 0.00 0.00 0.00 2.24
286 287 9.322773 GACACTTGGGATATTACTTACTTTACC 57.677 37.037 0.00 0.00 0.00 2.85
287 288 8.828751 ACACTTGGGATATTACTTACTTTACCA 58.171 33.333 0.00 0.00 0.00 3.25
288 289 9.675464 CACTTGGGATATTACTTACTTTACCAA 57.325 33.333 0.00 0.00 33.67 3.67
292 293 9.127277 TGGGATATTACTTACTTTACCAATTGC 57.873 33.333 0.00 0.00 0.00 3.56
293 294 8.573885 GGGATATTACTTACTTTACCAATTGCC 58.426 37.037 0.00 0.00 0.00 4.52
294 295 9.127277 GGATATTACTTACTTTACCAATTGCCA 57.873 33.333 0.00 0.00 0.00 4.92
295 296 9.946165 GATATTACTTACTTTACCAATTGCCAC 57.054 33.333 0.00 0.00 0.00 5.01
296 297 6.578163 TTACTTACTTTACCAATTGCCACC 57.422 37.500 0.00 0.00 0.00 4.61
297 298 4.736473 ACTTACTTTACCAATTGCCACCT 58.264 39.130 0.00 0.00 0.00 4.00
298 299 4.765339 ACTTACTTTACCAATTGCCACCTC 59.235 41.667 0.00 0.00 0.00 3.85
299 300 3.525800 ACTTTACCAATTGCCACCTCT 57.474 42.857 0.00 0.00 0.00 3.69
300 301 3.844640 ACTTTACCAATTGCCACCTCTT 58.155 40.909 0.00 0.00 0.00 2.85
301 302 4.223144 ACTTTACCAATTGCCACCTCTTT 58.777 39.130 0.00 0.00 0.00 2.52
302 303 4.039124 ACTTTACCAATTGCCACCTCTTTG 59.961 41.667 0.00 0.00 0.00 2.77
303 304 2.380064 ACCAATTGCCACCTCTTTGA 57.620 45.000 0.00 0.00 0.00 2.69
304 305 2.893424 ACCAATTGCCACCTCTTTGAT 58.107 42.857 0.00 0.00 0.00 2.57
305 306 2.564062 ACCAATTGCCACCTCTTTGATG 59.436 45.455 0.00 0.00 0.00 3.07
306 307 2.827322 CCAATTGCCACCTCTTTGATGA 59.173 45.455 0.00 0.00 0.00 2.92
307 308 3.258872 CCAATTGCCACCTCTTTGATGAA 59.741 43.478 0.00 0.00 0.00 2.57
308 309 4.240096 CAATTGCCACCTCTTTGATGAAC 58.760 43.478 0.00 0.00 0.00 3.18
309 310 1.909700 TGCCACCTCTTTGATGAACC 58.090 50.000 0.00 0.00 0.00 3.62
310 311 1.144708 TGCCACCTCTTTGATGAACCA 59.855 47.619 0.00 0.00 0.00 3.67
311 312 2.225091 TGCCACCTCTTTGATGAACCAT 60.225 45.455 0.00 0.00 0.00 3.55
312 313 3.010027 TGCCACCTCTTTGATGAACCATA 59.990 43.478 0.00 0.00 0.00 2.74
313 314 3.378427 GCCACCTCTTTGATGAACCATAC 59.622 47.826 0.00 0.00 0.00 2.39
314 315 3.623060 CCACCTCTTTGATGAACCATACG 59.377 47.826 0.00 0.00 0.00 3.06
315 316 4.503910 CACCTCTTTGATGAACCATACGA 58.496 43.478 0.00 0.00 0.00 3.43
316 317 5.118990 CACCTCTTTGATGAACCATACGAT 58.881 41.667 0.00 0.00 0.00 3.73
317 318 5.235186 CACCTCTTTGATGAACCATACGATC 59.765 44.000 0.00 0.00 0.00 3.69
318 319 5.129485 ACCTCTTTGATGAACCATACGATCT 59.871 40.000 0.00 0.00 0.00 2.75
319 320 5.694006 CCTCTTTGATGAACCATACGATCTC 59.306 44.000 0.00 0.00 0.00 2.75
320 321 5.281727 TCTTTGATGAACCATACGATCTCG 58.718 41.667 0.00 0.00 46.33 4.04
321 322 4.911514 TTGATGAACCATACGATCTCGA 57.088 40.909 6.60 0.00 43.02 4.04
322 323 5.453567 TTGATGAACCATACGATCTCGAT 57.546 39.130 6.60 0.00 43.02 3.59
323 324 5.048153 TGATGAACCATACGATCTCGATC 57.952 43.478 6.60 0.00 43.02 3.69
324 325 3.917329 TGAACCATACGATCTCGATCC 57.083 47.619 6.60 0.00 43.02 3.36
325 326 3.219281 TGAACCATACGATCTCGATCCA 58.781 45.455 6.60 0.00 43.02 3.41
326 327 3.634910 TGAACCATACGATCTCGATCCAA 59.365 43.478 6.60 0.00 43.02 3.53
327 328 3.644884 ACCATACGATCTCGATCCAAC 57.355 47.619 6.60 0.00 43.02 3.77
328 329 2.031069 ACCATACGATCTCGATCCAACG 60.031 50.000 6.60 0.00 43.02 4.10
329 330 1.979469 CATACGATCTCGATCCAACGC 59.021 52.381 6.60 0.00 43.02 4.84
330 331 0.309922 TACGATCTCGATCCAACGCC 59.690 55.000 6.60 0.00 43.02 5.68
331 332 1.661821 CGATCTCGATCCAACGCCC 60.662 63.158 1.57 0.00 43.02 6.13
332 333 1.661821 GATCTCGATCCAACGCCCG 60.662 63.158 0.00 0.00 31.76 6.13
333 334 3.151958 ATCTCGATCCAACGCCCGG 62.152 63.158 0.00 0.00 0.00 5.73
334 335 3.833645 CTCGATCCAACGCCCGGA 61.834 66.667 0.73 0.00 36.84 5.14
335 336 3.151710 TCGATCCAACGCCCGGAT 61.152 61.111 0.73 0.74 46.20 4.18
336 337 2.203015 CGATCCAACGCCCGGATT 60.203 61.111 0.73 0.00 43.49 3.01
337 338 1.068417 CGATCCAACGCCCGGATTA 59.932 57.895 0.73 0.00 43.49 1.75
338 339 0.944311 CGATCCAACGCCCGGATTAG 60.944 60.000 0.73 0.00 43.49 1.73
339 340 0.391597 GATCCAACGCCCGGATTAGA 59.608 55.000 0.73 0.00 43.49 2.10
340 341 0.106149 ATCCAACGCCCGGATTAGAC 59.894 55.000 0.73 0.00 40.49 2.59
341 342 1.523032 CCAACGCCCGGATTAGACC 60.523 63.158 0.73 0.00 0.00 3.85
342 343 1.523032 CAACGCCCGGATTAGACCC 60.523 63.158 0.73 0.00 0.00 4.46
343 344 2.738938 AACGCCCGGATTAGACCCC 61.739 63.158 0.73 0.00 0.00 4.95
344 345 2.842936 CGCCCGGATTAGACCCCT 60.843 66.667 0.73 0.00 0.00 4.79
345 346 2.868986 CGCCCGGATTAGACCCCTC 61.869 68.421 0.73 0.00 0.00 4.30
346 347 2.517798 GCCCGGATTAGACCCCTCC 61.518 68.421 0.73 0.00 0.00 4.30
347 348 1.842010 CCCGGATTAGACCCCTCCC 60.842 68.421 0.73 0.00 0.00 4.30
348 349 1.074775 CCGGATTAGACCCCTCCCA 60.075 63.158 0.00 0.00 0.00 4.37
349 350 0.473886 CCGGATTAGACCCCTCCCAT 60.474 60.000 0.00 0.00 0.00 4.00
350 351 0.977395 CGGATTAGACCCCTCCCATC 59.023 60.000 0.00 0.00 0.00 3.51
351 352 1.761371 CGGATTAGACCCCTCCCATCA 60.761 57.143 0.00 0.00 0.00 3.07
352 353 1.700186 GGATTAGACCCCTCCCATCAC 59.300 57.143 0.00 0.00 0.00 3.06
353 354 2.695585 GATTAGACCCCTCCCATCACT 58.304 52.381 0.00 0.00 0.00 3.41
354 355 3.439558 GGATTAGACCCCTCCCATCACTA 60.440 52.174 0.00 0.00 0.00 2.74
355 356 3.330126 TTAGACCCCTCCCATCACTAG 57.670 52.381 0.00 0.00 0.00 2.57
356 357 1.319947 AGACCCCTCCCATCACTAGA 58.680 55.000 0.00 0.00 0.00 2.43
357 358 1.062810 AGACCCCTCCCATCACTAGAC 60.063 57.143 0.00 0.00 0.00 2.59
358 359 0.031010 ACCCCTCCCATCACTAGACC 60.031 60.000 0.00 0.00 0.00 3.85
359 360 0.266152 CCCCTCCCATCACTAGACCT 59.734 60.000 0.00 0.00 0.00 3.85
360 361 1.344496 CCCCTCCCATCACTAGACCTT 60.344 57.143 0.00 0.00 0.00 3.50
361 362 2.043227 CCCTCCCATCACTAGACCTTC 58.957 57.143 0.00 0.00 0.00 3.46
362 363 2.043227 CCTCCCATCACTAGACCTTCC 58.957 57.143 0.00 0.00 0.00 3.46
363 364 2.043227 CTCCCATCACTAGACCTTCCC 58.957 57.143 0.00 0.00 0.00 3.97
364 365 0.753262 CCCATCACTAGACCTTCCCG 59.247 60.000 0.00 0.00 0.00 5.14
365 366 1.486211 CCATCACTAGACCTTCCCGT 58.514 55.000 0.00 0.00 0.00 5.28
366 367 2.662866 CCATCACTAGACCTTCCCGTA 58.337 52.381 0.00 0.00 0.00 4.02
367 368 3.231818 CCATCACTAGACCTTCCCGTAT 58.768 50.000 0.00 0.00 0.00 3.06
368 369 3.005897 CCATCACTAGACCTTCCCGTATG 59.994 52.174 0.00 0.00 0.00 2.39
369 370 2.029623 TCACTAGACCTTCCCGTATGC 58.970 52.381 0.00 0.00 0.00 3.14
370 371 1.754803 CACTAGACCTTCCCGTATGCA 59.245 52.381 0.00 0.00 0.00 3.96
371 372 2.365617 CACTAGACCTTCCCGTATGCAT 59.634 50.000 3.79 3.79 0.00 3.96
372 373 3.039011 ACTAGACCTTCCCGTATGCATT 58.961 45.455 3.54 0.00 0.00 3.56
373 374 3.454812 ACTAGACCTTCCCGTATGCATTT 59.545 43.478 3.54 0.00 0.00 2.32
374 375 2.919228 AGACCTTCCCGTATGCATTTC 58.081 47.619 3.54 0.00 0.00 2.17
375 376 1.947456 GACCTTCCCGTATGCATTTCC 59.053 52.381 3.54 0.00 0.00 3.13
376 377 0.944386 CCTTCCCGTATGCATTTCCG 59.056 55.000 3.54 5.28 0.00 4.30
377 378 0.307760 CTTCCCGTATGCATTTCCGC 59.692 55.000 3.54 0.00 0.00 5.54
379 380 0.393132 TCCCGTATGCATTTCCGCAA 60.393 50.000 3.54 0.00 46.87 4.85
380 381 0.029300 CCCGTATGCATTTCCGCAAG 59.971 55.000 3.54 0.00 46.87 4.01
381 382 0.592247 CCGTATGCATTTCCGCAAGC 60.592 55.000 3.54 0.00 46.87 4.01
382 383 0.098552 CGTATGCATTTCCGCAAGCA 59.901 50.000 3.54 0.00 46.87 3.91
383 384 1.268692 CGTATGCATTTCCGCAAGCAT 60.269 47.619 3.54 0.00 46.87 3.79
384 385 2.032117 CGTATGCATTTCCGCAAGCATA 60.032 45.455 3.54 0.00 46.87 3.14
385 386 2.787601 ATGCATTTCCGCAAGCATAG 57.212 45.000 0.00 0.00 46.87 2.23
386 387 0.101040 TGCATTTCCGCAAGCATAGC 59.899 50.000 0.00 0.00 39.45 2.97
387 388 0.595825 GCATTTCCGCAAGCATAGCC 60.596 55.000 0.00 0.00 0.00 3.93
388 389 0.740149 CATTTCCGCAAGCATAGCCA 59.260 50.000 0.00 0.00 0.00 4.75
389 390 0.740737 ATTTCCGCAAGCATAGCCAC 59.259 50.000 0.00 0.00 0.00 5.01
390 391 0.607762 TTTCCGCAAGCATAGCCACA 60.608 50.000 0.00 0.00 0.00 4.17
419 420 1.004277 ACACCGAACCATTACATGCCT 59.996 47.619 0.00 0.00 0.00 4.75
450 475 9.717942 CAAAACCATTACCAATTAGAATTTCCA 57.282 29.630 0.00 0.00 0.00 3.53
471 496 9.997482 TTTCCATTCAGTCTATTTATTTTACGC 57.003 29.630 0.00 0.00 0.00 4.42
475 500 6.486657 TCAGTCTATTTATTTTACGCGTCG 57.513 37.500 18.63 0.00 0.00 5.12
500 525 2.516930 GGCATCCACCATGTCCCG 60.517 66.667 0.00 0.00 34.56 5.14
512 537 1.414181 CATGTCCCGGTCAGCTTCTAT 59.586 52.381 0.00 0.00 0.00 1.98
523 548 1.137872 CAGCTTCTATCGTTGGCCTCT 59.862 52.381 3.32 0.00 0.00 3.69
524 549 1.834263 AGCTTCTATCGTTGGCCTCTT 59.166 47.619 3.32 0.00 0.00 2.85
527 552 3.742640 GCTTCTATCGTTGGCCTCTTGAT 60.743 47.826 3.32 4.94 0.00 2.57
533 558 4.422073 TCGTTGGCCTCTTGATATGAAT 57.578 40.909 3.32 0.00 0.00 2.57
534 559 4.780815 TCGTTGGCCTCTTGATATGAATT 58.219 39.130 3.32 0.00 0.00 2.17
540 565 9.120538 GTTGGCCTCTTGATATGAATTAAAGTA 57.879 33.333 3.32 0.00 0.00 2.24
544 569 9.109393 GCCTCTTGATATGAATTAAAGTACACA 57.891 33.333 0.00 0.00 0.00 3.72
560 585 2.666317 ACACAGGTTTTTCCCTCCAAG 58.334 47.619 0.00 0.00 36.75 3.61
594 620 2.657237 CTGTCACGTCCAGGGGTC 59.343 66.667 4.21 0.00 0.00 4.46
600 626 1.154454 ACGTCCAGGGGTCAGTGTA 59.846 57.895 0.00 0.00 0.00 2.90
618 645 1.069668 GTACACCTCGTCCTTGTGGTT 59.930 52.381 0.00 0.00 33.63 3.67
640 667 6.882678 GGTTTACAGTAACCCACTAACATCAT 59.117 38.462 2.00 0.00 41.42 2.45
641 668 8.042515 GGTTTACAGTAACCCACTAACATCATA 58.957 37.037 2.00 0.00 41.42 2.15
642 669 8.876790 GTTTACAGTAACCCACTAACATCATAC 58.123 37.037 0.00 0.00 34.98 2.39
643 670 6.614694 ACAGTAACCCACTAACATCATACA 57.385 37.500 0.00 0.00 34.98 2.29
644 671 7.011499 ACAGTAACCCACTAACATCATACAA 57.989 36.000 0.00 0.00 34.98 2.41
700 729 1.225855 TCAAATCACTGACGCGCTTT 58.774 45.000 5.73 0.00 0.00 3.51
722 751 2.354560 GCGACGCGGCAAAGTTTTC 61.355 57.895 14.85 0.00 0.00 2.29
723 752 1.278637 CGACGCGGCAAAGTTTTCT 59.721 52.632 14.85 0.00 0.00 2.52
726 755 2.190161 GACGCGGCAAAGTTTTCTTTT 58.810 42.857 7.34 0.00 46.55 2.27
727 756 2.601314 GACGCGGCAAAGTTTTCTTTTT 59.399 40.909 7.34 0.00 46.55 1.94
756 785 2.618709 CTGAAGAACCTGCCTTTTCGTT 59.381 45.455 0.00 0.00 0.00 3.85
771 800 8.030106 TGCCTTTTCGTTAAGAAGAAAGAAAAA 58.970 29.630 9.93 0.00 42.31 1.94
772 801 9.031360 GCCTTTTCGTTAAGAAGAAAGAAAAAT 57.969 29.630 9.93 0.00 42.31 1.82
775 804 9.863845 TTTTCGTTAAGAAGAAAGAAAAATGGT 57.136 25.926 7.29 0.00 41.01 3.55
810 860 1.732941 AACGACACACACACACACAT 58.267 45.000 0.00 0.00 0.00 3.21
817 880 0.818852 CACACACACACATCAGCCCA 60.819 55.000 0.00 0.00 0.00 5.36
837 900 2.335316 AAGGCTGTGTACCAAACGAA 57.665 45.000 0.00 0.00 0.00 3.85
841 904 0.863144 CTGTGTACCAAACGAACCGG 59.137 55.000 0.00 0.00 0.00 5.28
848 911 2.356673 AAACGAACCGGCGACCTC 60.357 61.111 9.30 0.00 34.83 3.85
878 946 1.260561 GCGAGCAGAGTCGAAAACAAA 59.739 47.619 0.00 0.00 42.85 2.83
882 950 1.663494 CAGAGTCGAAAACAAAGCGC 58.337 50.000 0.00 0.00 0.00 5.92
917 986 1.463444 AGTTTCTGCAATAACGCGGTC 59.537 47.619 12.47 0.00 39.42 4.79
918 987 1.195900 GTTTCTGCAATAACGCGGTCA 59.804 47.619 12.47 0.00 39.42 4.02
935 1004 3.923461 CGGTCAAGAAGAAGCTTACAGAG 59.077 47.826 0.00 0.00 0.00 3.35
972 1041 1.133637 TGTTGCAAAACCTCAGCCCTA 60.134 47.619 0.00 0.00 0.00 3.53
974 1043 0.038166 TGCAAAACCTCAGCCCTAGG 59.962 55.000 0.06 0.06 40.20 3.02
1040 1109 3.132160 CTGATTCCAGTATGAGCAGCTG 58.868 50.000 10.11 10.11 39.69 4.24
1120 1189 0.679640 CCCAAGCTCATTTACGGCCA 60.680 55.000 2.24 0.00 0.00 5.36
1121 1190 0.451783 CCAAGCTCATTTACGGCCAC 59.548 55.000 2.24 0.00 0.00 5.01
1129 1198 1.002900 CATTTACGGCCACGGCAATAG 60.003 52.381 10.83 0.64 46.48 1.73
1139 1208 2.727392 CGGCAATAGTCCCCACCGA 61.727 63.158 0.00 0.00 43.19 4.69
1140 1209 1.146263 GGCAATAGTCCCCACCGAG 59.854 63.158 0.00 0.00 0.00 4.63
1151 1270 1.682684 CCACCGAGACAGGGCTAGT 60.683 63.158 0.00 0.00 35.02 2.57
1156 1275 0.948678 CGAGACAGGGCTAGTAGCTC 59.051 60.000 21.20 18.16 43.65 4.09
1160 1279 1.045911 ACAGGGCTAGTAGCTCCAGC 61.046 60.000 18.70 2.62 44.67 4.85
1161 1280 1.458588 AGGGCTAGTAGCTCCAGCC 60.459 63.158 18.70 19.88 44.67 4.85
1162 1281 2.731374 GGCTAGTAGCTCCAGCCG 59.269 66.667 21.20 0.00 44.99 5.52
1163 1282 2.731374 GCTAGTAGCTCCAGCCGG 59.269 66.667 15.16 0.00 43.38 6.13
1164 1283 1.828660 GCTAGTAGCTCCAGCCGGA 60.829 63.158 15.16 0.00 43.38 5.14
1165 1284 2.034607 CTAGTAGCTCCAGCCGGAC 58.965 63.158 5.05 0.00 43.38 4.79
1166 1285 0.752009 CTAGTAGCTCCAGCCGGACA 60.752 60.000 5.05 0.00 43.38 4.02
1167 1286 0.106167 TAGTAGCTCCAGCCGGACAT 60.106 55.000 5.05 0.00 43.38 3.06
1168 1287 1.068250 GTAGCTCCAGCCGGACATC 59.932 63.158 5.05 0.00 43.38 3.06
1169 1288 1.381191 TAGCTCCAGCCGGACATCA 60.381 57.895 5.05 0.00 43.38 3.07
1170 1289 1.395045 TAGCTCCAGCCGGACATCAG 61.395 60.000 5.05 0.00 43.38 2.90
1171 1290 2.503061 CTCCAGCCGGACATCAGG 59.497 66.667 5.05 0.00 35.91 3.86
1172 1291 2.038813 TCCAGCCGGACATCAGGA 59.961 61.111 5.05 0.00 35.91 3.86
1173 1292 1.383109 TCCAGCCGGACATCAGGAT 60.383 57.895 5.05 0.00 35.91 3.24
1177 1296 1.070445 GCCGGACATCAGGATCAGG 59.930 63.158 5.05 0.00 32.68 3.86
1362 1481 1.343069 ATATCCGGCTCTTGGAGTCC 58.657 55.000 0.73 0.73 39.30 3.85
1476 1595 0.823356 TGCTTGTCCTGCCCAAGAAC 60.823 55.000 4.43 0.00 41.44 3.01
1530 8199 6.899089 TCAGATTGTAGATGAATTAAGCCCA 58.101 36.000 0.00 0.00 0.00 5.36
1533 8202 8.133627 CAGATTGTAGATGAATTAAGCCCAAAG 58.866 37.037 0.00 0.00 0.00 2.77
1563 8232 5.106038 TGCATCTTTATCAGCAAGGTTTGAG 60.106 40.000 0.00 0.00 33.48 3.02
1617 8286 3.515901 GGAGTGGTCTTCAGGTACTCAAT 59.484 47.826 0.00 0.00 39.51 2.57
1619 8288 3.904339 AGTGGTCTTCAGGTACTCAATGT 59.096 43.478 0.00 0.00 34.60 2.71
1622 8291 4.346709 TGGTCTTCAGGTACTCAATGTCAA 59.653 41.667 0.00 0.00 34.60 3.18
1632 8301 7.551974 CAGGTACTCAATGTCAAGATCTTTGAT 59.448 37.037 4.86 0.00 34.60 2.57
1653 8322 8.547481 TTGATTATACATCTGAAGTAGTCCCA 57.453 34.615 0.00 0.00 0.00 4.37
1686 8355 7.170965 GTGGTATCCATGAGATCACCAAATAT 58.829 38.462 17.04 0.00 38.87 1.28
1692 8361 7.774134 TCCATGAGATCACCAAATATTTGTTG 58.226 34.615 23.24 20.24 36.45 3.33
1734 8403 3.009363 TGGACAATGGCAGATCTCTCAAA 59.991 43.478 0.00 0.00 0.00 2.69
1735 8404 3.376546 GGACAATGGCAGATCTCTCAAAC 59.623 47.826 0.00 0.00 0.00 2.93
1749 8418 3.585862 TCTCAAACTCATACTTGTCGGC 58.414 45.455 0.00 0.00 0.00 5.54
1750 8419 3.006430 TCTCAAACTCATACTTGTCGGCA 59.994 43.478 0.00 0.00 0.00 5.69
1762 8431 1.737838 TGTCGGCAATGAACAGGATC 58.262 50.000 0.00 0.00 0.00 3.36
1763 8432 1.003003 TGTCGGCAATGAACAGGATCA 59.997 47.619 0.00 0.00 0.00 2.92
1764 8433 1.667724 GTCGGCAATGAACAGGATCAG 59.332 52.381 0.00 0.00 31.76 2.90
1765 8434 1.019673 CGGCAATGAACAGGATCAGG 58.980 55.000 0.00 0.00 31.76 3.86
1766 8435 1.407299 CGGCAATGAACAGGATCAGGA 60.407 52.381 0.00 0.00 31.76 3.86
1767 8436 2.747467 CGGCAATGAACAGGATCAGGAT 60.747 50.000 0.00 0.00 31.76 3.24
1772 8441 1.848388 TGAACAGGATCAGGATGGCAT 59.152 47.619 0.00 0.00 36.16 4.40
1778 8447 1.133699 GGATCAGGATGGCATGGTTGA 60.134 52.381 3.81 6.16 36.16 3.18
1798 8467 1.376543 AATGGAGACGCTGCAAGATG 58.623 50.000 0.00 0.00 35.08 2.90
1817 8486 2.703416 TGCTGTTGCTACCTTGATCTG 58.297 47.619 0.00 0.00 40.48 2.90
1830 8499 5.006386 ACCTTGATCTGTCACTTGGAAATC 58.994 41.667 0.00 0.00 33.11 2.17
1901 8570 5.801350 ATGTTCATGGTGAATAACGTGAG 57.199 39.130 0.00 0.00 38.79 3.51
1999 8668 3.070018 CAACTGAAGGACCACATCTCAC 58.930 50.000 0.00 0.00 0.00 3.51
2000 8669 1.273606 ACTGAAGGACCACATCTCACG 59.726 52.381 0.00 0.00 0.00 4.35
2025 8694 5.920193 TCATCAACATTTCTTGGGAATCC 57.080 39.130 0.00 0.00 0.00 3.01
2045 8714 2.287188 CCGTCATGTATTGCTTCCATGC 60.287 50.000 0.00 0.00 36.70 4.06
2063 8732 4.378774 CATGCAAAGACCAACAAAATCCA 58.621 39.130 0.00 0.00 0.00 3.41
2091 8760 1.550524 TCTAGCCTACCAACACTGCAG 59.449 52.381 13.48 13.48 0.00 4.41
2112 8781 9.976511 CTGCAGATATTTAACATGGAATTTGAT 57.023 29.630 8.42 0.00 0.00 2.57
2193 8862 9.935241 AATATGCGTAAATCAGTATCAGAGAAT 57.065 29.630 0.00 0.00 0.00 2.40
2228 8897 7.418025 GGCTTACAGTACATACCTTGAGAATCT 60.418 40.741 0.00 0.00 34.92 2.40
2280 8949 3.652869 ACACCCCTGAAGATCTTGAAGAA 59.347 43.478 14.00 0.00 0.00 2.52
2284 8953 4.263243 CCCCTGAAGATCTTGAAGAACTGT 60.263 45.833 14.00 0.00 27.20 3.55
2329 8998 4.796110 TGGGCATAGCTAAAAAGAGGAT 57.204 40.909 0.00 0.00 0.00 3.24
2572 9279 3.470645 ACAACTAACACACACTCCCTC 57.529 47.619 0.00 0.00 0.00 4.30
2577 9284 1.794714 AACACACACTCCCTCTGTCT 58.205 50.000 0.00 0.00 0.00 3.41
2584 9291 4.593206 ACACACTCCCTCTGTCTCAAAATA 59.407 41.667 0.00 0.00 0.00 1.40
2591 9298 6.806751 TCCCTCTGTCTCAAAATATAAGACG 58.193 40.000 0.00 0.00 41.84 4.18
2596 9303 9.959775 CTCTGTCTCAAAATATAAGACGTTTTC 57.040 33.333 0.00 0.00 41.84 2.29
2597 9304 9.706691 TCTGTCTCAAAATATAAGACGTTTTCT 57.293 29.630 0.00 0.00 41.84 2.52
2603 9310 9.872757 TCAAAATATAAGACGTTTTCTTGACAC 57.127 29.630 0.00 0.00 44.84 3.67
2604 9311 9.878599 CAAAATATAAGACGTTTTCTTGACACT 57.121 29.630 0.00 0.00 44.84 3.55
2605 9312 9.878599 AAAATATAAGACGTTTTCTTGACACTG 57.121 29.630 0.00 0.00 44.84 3.66
2606 9313 8.603242 AATATAAGACGTTTTCTTGACACTGT 57.397 30.769 0.00 0.00 44.84 3.55
2607 9314 4.859629 AAGACGTTTTCTTGACACTGTC 57.140 40.909 1.86 1.86 43.45 3.51
2608 9315 3.857052 AGACGTTTTCTTGACACTGTCA 58.143 40.909 7.84 7.84 41.09 3.58
2609 9316 4.442706 AGACGTTTTCTTGACACTGTCAT 58.557 39.130 12.71 0.00 42.40 3.06
2610 9317 5.597806 AGACGTTTTCTTGACACTGTCATA 58.402 37.500 12.71 2.02 42.40 2.15
2611 9318 5.692204 AGACGTTTTCTTGACACTGTCATAG 59.308 40.000 12.71 12.23 42.40 2.23
2612 9319 5.357257 ACGTTTTCTTGACACTGTCATAGT 58.643 37.500 12.71 3.54 42.40 2.12
2613 9320 5.462398 ACGTTTTCTTGACACTGTCATAGTC 59.538 40.000 12.71 2.20 42.40 2.59
2614 9321 5.692204 CGTTTTCTTGACACTGTCATAGTCT 59.308 40.000 12.71 0.00 42.40 3.24
2615 9322 6.346120 CGTTTTCTTGACACTGTCATAGTCTG 60.346 42.308 12.71 0.00 42.40 3.51
2616 9323 6.405278 TTTCTTGACACTGTCATAGTCTGA 57.595 37.500 12.71 2.98 42.40 3.27
2663 9370 3.579151 AGACAGAGGGAGTACTGTTTTCC 59.421 47.826 0.00 0.00 45.54 3.13
2691 9398 5.392595 CCAAGAAAAACAACTCTCGAACCAA 60.393 40.000 0.00 0.00 0.00 3.67
2693 9400 4.941873 AGAAAAACAACTCTCGAACCAACT 59.058 37.500 0.00 0.00 0.00 3.16
2695 9402 6.596497 AGAAAAACAACTCTCGAACCAACTAA 59.404 34.615 0.00 0.00 0.00 2.24
2696 9403 6.937436 AAAACAACTCTCGAACCAACTAAT 57.063 33.333 0.00 0.00 0.00 1.73
2707 9414 2.853159 CAACTAATGGAGCGTGGCA 58.147 52.632 0.00 0.00 0.00 4.92
2778 9485 5.512298 TCTGCAGGGTATAGTACTGTTGTA 58.488 41.667 15.13 0.00 34.79 2.41
2779 9486 5.953548 TCTGCAGGGTATAGTACTGTTGTAA 59.046 40.000 15.13 0.00 34.79 2.41
2787 9494 9.420551 GGGTATAGTACTGTTGTAATATTCAGC 57.579 37.037 5.39 0.00 39.61 4.26
2809 9516 2.517402 GTTGTGTTGACGGGGGCA 60.517 61.111 0.00 0.00 0.00 5.36
2829 9536 4.488879 GCAGCACTTTAATTTCTTCCCAG 58.511 43.478 0.00 0.00 0.00 4.45
2853 9561 2.057137 TGGCTACAAGGCATTCATCC 57.943 50.000 0.00 0.00 46.47 3.51
2880 9588 2.484264 GAGTGGTTCGGTTTGGATCAAG 59.516 50.000 0.00 0.00 0.00 3.02
2901 9609 5.407407 AGGAAGAGAAAGAAAGTATCGCA 57.593 39.130 0.00 0.00 0.00 5.10
2905 9613 6.536941 GGAAGAGAAAGAAAGTATCGCAGAAT 59.463 38.462 0.00 0.00 43.58 2.40
2906 9614 6.900568 AGAGAAAGAAAGTATCGCAGAATG 57.099 37.500 0.00 0.00 43.58 2.67
2917 9625 2.293677 CGCAGAATGTGTGGCTACTA 57.706 50.000 0.64 0.00 42.83 1.82
2969 9677 1.227943 GGCTGGCACACTGAACTGA 60.228 57.895 0.00 0.00 0.00 3.41
2978 9686 3.270027 CACACTGAACTGACAGGAACAA 58.730 45.455 7.51 0.00 41.59 2.83
2981 9689 3.251729 CACTGAACTGACAGGAACAATGG 59.748 47.826 7.51 0.00 41.59 3.16
2982 9690 3.136443 ACTGAACTGACAGGAACAATGGA 59.864 43.478 7.51 0.00 41.59 3.41
2983 9691 4.136796 CTGAACTGACAGGAACAATGGAA 58.863 43.478 7.51 0.00 34.64 3.53
2987 9695 4.137543 ACTGACAGGAACAATGGAAAGAC 58.862 43.478 7.51 0.00 0.00 3.01
2995 9703 4.457257 GGAACAATGGAAAGACTTCTCTGG 59.543 45.833 0.00 0.00 0.00 3.86
2996 9704 4.026356 ACAATGGAAAGACTTCTCTGGG 57.974 45.455 0.00 0.00 0.00 4.45
2999 9707 1.625818 TGGAAAGACTTCTCTGGGAGC 59.374 52.381 0.00 0.00 0.00 4.70
3015 9723 2.424234 GGGAGCAATGCTAATTGGGGTA 60.424 50.000 8.12 0.00 42.98 3.69
3026 9734 7.875327 TGCTAATTGGGGTAGTTTAGATTTC 57.125 36.000 0.00 0.00 0.00 2.17
3031 9739 7.770366 ATTGGGGTAGTTTAGATTTCGTTTT 57.230 32.000 0.00 0.00 0.00 2.43
3053 9761 6.662414 TTAATAGCTTTCACAGGTTCATCG 57.338 37.500 0.00 0.00 34.13 3.84
3057 9765 2.413453 GCTTTCACAGGTTCATCGAGTC 59.587 50.000 0.00 0.00 0.00 3.36
3083 9791 4.141135 TGAAGTTAAATCCCTGAACACCCA 60.141 41.667 0.00 0.00 0.00 4.51
3180 9888 5.508567 TGAATTATTGGATGAGTTGCAGGA 58.491 37.500 0.00 0.00 0.00 3.86
3181 9889 5.591472 TGAATTATTGGATGAGTTGCAGGAG 59.409 40.000 0.00 0.00 0.00 3.69
3182 9890 1.760192 ATTGGATGAGTTGCAGGAGC 58.240 50.000 0.00 0.00 42.57 4.70
3183 9891 0.322816 TTGGATGAGTTGCAGGAGCC 60.323 55.000 0.00 0.00 41.13 4.70
3184 9892 1.300963 GGATGAGTTGCAGGAGCCA 59.699 57.895 0.00 0.00 41.13 4.75
3185 9893 0.747283 GGATGAGTTGCAGGAGCCAG 60.747 60.000 0.00 0.00 41.13 4.85
3186 9894 1.375098 GATGAGTTGCAGGAGCCAGC 61.375 60.000 0.00 0.00 41.13 4.85
3187 9895 2.033141 GAGTTGCAGGAGCCAGCA 59.967 61.111 2.17 2.17 41.13 4.41
3188 9896 1.601759 GAGTTGCAGGAGCCAGCAA 60.602 57.895 14.31 14.31 44.14 3.91
3262 9970 3.398694 CCTGATCAGGCCATGACTG 57.601 57.895 28.45 10.14 41.91 3.51
3275 9985 3.614092 CCATGACTGAGTTAAGCCACAT 58.386 45.455 0.00 0.00 0.00 3.21
3277 9987 5.185454 CCATGACTGAGTTAAGCCACATAA 58.815 41.667 0.00 0.00 0.00 1.90
3281 9991 5.123820 TGACTGAGTTAAGCCACATAATTGC 59.876 40.000 0.00 0.00 0.00 3.56
3282 9992 5.256474 ACTGAGTTAAGCCACATAATTGCT 58.744 37.500 0.00 0.00 36.79 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.403252 ACTAAACTTGCCATCCTCGG 57.597 50.000 0.00 0.00 0.00 4.63
4 5 3.125316 GTGAACTAAACTTGCCATCCTCG 59.875 47.826 0.00 0.00 0.00 4.63
5 6 3.125316 CGTGAACTAAACTTGCCATCCTC 59.875 47.826 0.00 0.00 0.00 3.71
6 7 3.074412 CGTGAACTAAACTTGCCATCCT 58.926 45.455 0.00 0.00 0.00 3.24
7 8 3.071479 TCGTGAACTAAACTTGCCATCC 58.929 45.455 0.00 0.00 0.00 3.51
8 9 3.424962 GCTCGTGAACTAAACTTGCCATC 60.425 47.826 0.00 0.00 0.00 3.51
9 10 2.484264 GCTCGTGAACTAAACTTGCCAT 59.516 45.455 0.00 0.00 0.00 4.40
10 11 1.871039 GCTCGTGAACTAAACTTGCCA 59.129 47.619 0.00 0.00 0.00 4.92
11 12 1.871039 TGCTCGTGAACTAAACTTGCC 59.129 47.619 0.00 0.00 0.00 4.52
12 13 3.813529 ATGCTCGTGAACTAAACTTGC 57.186 42.857 0.00 0.00 0.00 4.01
13 14 5.839262 TGTATGCTCGTGAACTAAACTTG 57.161 39.130 0.00 0.00 0.00 3.16
14 15 6.854496 TTTGTATGCTCGTGAACTAAACTT 57.146 33.333 0.00 0.00 0.00 2.66
15 16 7.435068 AATTTGTATGCTCGTGAACTAAACT 57.565 32.000 0.00 0.00 0.00 2.66
16 17 6.461698 CGAATTTGTATGCTCGTGAACTAAAC 59.538 38.462 0.00 0.00 0.00 2.01
17 18 6.530567 CGAATTTGTATGCTCGTGAACTAAA 58.469 36.000 0.00 0.00 0.00 1.85
18 19 5.445407 GCGAATTTGTATGCTCGTGAACTAA 60.445 40.000 0.00 0.00 33.87 2.24
19 20 4.032445 GCGAATTTGTATGCTCGTGAACTA 59.968 41.667 0.00 0.00 33.87 2.24
20 21 3.181520 GCGAATTTGTATGCTCGTGAACT 60.182 43.478 0.00 0.00 33.87 3.01
21 22 3.091417 GCGAATTTGTATGCTCGTGAAC 58.909 45.455 0.00 0.00 33.87 3.18
22 23 2.095213 GGCGAATTTGTATGCTCGTGAA 59.905 45.455 0.00 0.00 33.87 3.18
23 24 1.663643 GGCGAATTTGTATGCTCGTGA 59.336 47.619 0.00 0.00 33.87 4.35
24 25 1.665679 AGGCGAATTTGTATGCTCGTG 59.334 47.619 0.00 0.00 33.87 4.35
25 26 1.933853 GAGGCGAATTTGTATGCTCGT 59.066 47.619 0.00 0.00 33.87 4.18
26 27 1.933181 TGAGGCGAATTTGTATGCTCG 59.067 47.619 0.00 0.00 0.00 5.03
27 28 4.355543 TTTGAGGCGAATTTGTATGCTC 57.644 40.909 0.00 0.00 0.00 4.26
28 29 4.989279 ATTTGAGGCGAATTTGTATGCT 57.011 36.364 0.00 0.00 0.00 3.79
29 30 6.407475 AAAATTTGAGGCGAATTTGTATGC 57.593 33.333 6.23 0.00 37.47 3.14
56 57 5.104982 AGCAAGACAATTTCCTGACCAAAAA 60.105 36.000 0.00 0.00 0.00 1.94
57 58 4.405358 AGCAAGACAATTTCCTGACCAAAA 59.595 37.500 0.00 0.00 0.00 2.44
58 59 3.960102 AGCAAGACAATTTCCTGACCAAA 59.040 39.130 0.00 0.00 0.00 3.28
59 60 3.565307 AGCAAGACAATTTCCTGACCAA 58.435 40.909 0.00 0.00 0.00 3.67
60 61 3.228188 AGCAAGACAATTTCCTGACCA 57.772 42.857 0.00 0.00 0.00 4.02
61 62 3.858503 GCAAGCAAGACAATTTCCTGACC 60.859 47.826 0.00 0.00 0.00 4.02
62 63 3.243501 TGCAAGCAAGACAATTTCCTGAC 60.244 43.478 0.00 0.00 0.00 3.51
63 64 2.957680 TGCAAGCAAGACAATTTCCTGA 59.042 40.909 0.00 0.00 0.00 3.86
64 65 3.374220 TGCAAGCAAGACAATTTCCTG 57.626 42.857 0.00 0.00 0.00 3.86
65 66 4.141869 ACTTTGCAAGCAAGACAATTTCCT 60.142 37.500 7.60 0.00 37.24 3.36
66 67 4.122046 ACTTTGCAAGCAAGACAATTTCC 58.878 39.130 7.60 0.00 37.24 3.13
67 68 6.826893 TTACTTTGCAAGCAAGACAATTTC 57.173 33.333 7.60 0.00 37.24 2.17
68 69 7.790823 AATTACTTTGCAAGCAAGACAATTT 57.209 28.000 7.60 0.00 37.24 1.82
69 70 7.790823 AAATTACTTTGCAAGCAAGACAATT 57.209 28.000 7.60 10.78 37.24 2.32
70 71 7.632721 CAAAATTACTTTGCAAGCAAGACAAT 58.367 30.769 7.60 5.94 38.17 2.71
71 72 7.002816 CAAAATTACTTTGCAAGCAAGACAA 57.997 32.000 7.60 3.99 38.17 3.18
72 73 6.586868 CAAAATTACTTTGCAAGCAAGACA 57.413 33.333 7.60 0.00 38.17 3.41
93 94 7.147949 CAATTTATATTGGGCCAAAAATGGCAA 60.148 33.333 24.97 13.69 43.97 4.52
94 95 6.320672 CAATTTATATTGGGCCAAAAATGGCA 59.679 34.615 24.97 8.63 43.97 4.92
95 96 6.735419 GCAATTTATATTGGGCCAAAAATGGC 60.735 38.462 26.62 26.62 45.57 4.40
96 97 6.238981 GGCAATTTATATTGGGCCAAAAATGG 60.239 38.462 24.97 21.11 41.21 3.16
97 98 6.320672 TGGCAATTTATATTGGGCCAAAAATG 59.679 34.615 24.97 16.41 41.21 2.32
98 99 6.430007 TGGCAATTTATATTGGGCCAAAAAT 58.570 32.000 24.97 20.53 41.21 1.82
99 100 5.819991 TGGCAATTTATATTGGGCCAAAAA 58.180 33.333 24.97 19.17 41.21 1.94
100 101 5.441718 TGGCAATTTATATTGGGCCAAAA 57.558 34.783 24.97 13.48 41.21 2.44
101 102 5.131642 TCATGGCAATTTATATTGGGCCAAA 59.868 36.000 24.97 13.06 41.21 3.28
102 103 4.657504 TCATGGCAATTTATATTGGGCCAA 59.342 37.500 23.33 23.33 41.21 4.52
103 104 4.229639 TCATGGCAATTTATATTGGGCCA 58.770 39.130 0.00 0.00 41.21 5.36
104 105 4.888326 TCATGGCAATTTATATTGGGCC 57.112 40.909 0.00 0.00 41.21 5.80
105 106 7.416817 GTTTTTCATGGCAATTTATATTGGGC 58.583 34.615 7.83 2.69 41.21 5.36
106 107 7.629130 CGTTTTTCATGGCAATTTATATTGGG 58.371 34.615 7.83 0.00 41.21 4.12
107 108 7.011295 AGCGTTTTTCATGGCAATTTATATTGG 59.989 33.333 7.83 0.00 41.21 3.16
108 109 7.908230 AGCGTTTTTCATGGCAATTTATATTG 58.092 30.769 0.00 1.86 43.28 1.90
109 110 7.043458 CGAGCGTTTTTCATGGCAATTTATATT 60.043 33.333 0.00 0.00 0.00 1.28
110 111 6.417635 CGAGCGTTTTTCATGGCAATTTATAT 59.582 34.615 0.00 0.00 0.00 0.86
111 112 5.741510 CGAGCGTTTTTCATGGCAATTTATA 59.258 36.000 0.00 0.00 0.00 0.98
112 113 4.562394 CGAGCGTTTTTCATGGCAATTTAT 59.438 37.500 0.00 0.00 0.00 1.40
113 114 3.917380 CGAGCGTTTTTCATGGCAATTTA 59.083 39.130 0.00 0.00 0.00 1.40
114 115 2.730928 CGAGCGTTTTTCATGGCAATTT 59.269 40.909 0.00 0.00 0.00 1.82
115 116 2.030363 TCGAGCGTTTTTCATGGCAATT 60.030 40.909 0.00 0.00 0.00 2.32
116 117 1.539388 TCGAGCGTTTTTCATGGCAAT 59.461 42.857 0.00 0.00 0.00 3.56
117 118 0.947960 TCGAGCGTTTTTCATGGCAA 59.052 45.000 0.00 0.00 0.00 4.52
118 119 1.164411 ATCGAGCGTTTTTCATGGCA 58.836 45.000 0.00 0.00 0.00 4.92
119 120 2.262572 AATCGAGCGTTTTTCATGGC 57.737 45.000 0.00 0.00 0.00 4.40
120 121 2.342354 GCAAATCGAGCGTTTTTCATGG 59.658 45.455 0.00 0.00 0.00 3.66
121 122 2.342354 GGCAAATCGAGCGTTTTTCATG 59.658 45.455 0.00 0.00 0.00 3.07
122 123 2.030363 TGGCAAATCGAGCGTTTTTCAT 60.030 40.909 0.00 0.00 0.00 2.57
123 124 1.335182 TGGCAAATCGAGCGTTTTTCA 59.665 42.857 0.00 0.00 0.00 2.69
124 125 2.044888 TGGCAAATCGAGCGTTTTTC 57.955 45.000 0.00 0.00 0.00 2.29
125 126 2.030363 TCATGGCAAATCGAGCGTTTTT 60.030 40.909 0.00 0.00 0.00 1.94
126 127 1.539388 TCATGGCAAATCGAGCGTTTT 59.461 42.857 0.00 0.00 0.00 2.43
127 128 1.131126 CTCATGGCAAATCGAGCGTTT 59.869 47.619 0.00 0.00 0.00 3.60
128 129 0.729116 CTCATGGCAAATCGAGCGTT 59.271 50.000 0.00 0.00 0.00 4.84
129 130 0.391661 ACTCATGGCAAATCGAGCGT 60.392 50.000 0.00 0.00 0.00 5.07
130 131 1.570813 TACTCATGGCAAATCGAGCG 58.429 50.000 0.00 0.00 0.00 5.03
131 132 4.355543 TTTTACTCATGGCAAATCGAGC 57.644 40.909 0.00 0.00 0.00 5.03
132 133 6.789262 AGATTTTTACTCATGGCAAATCGAG 58.211 36.000 0.00 0.00 38.39 4.04
133 134 6.757897 AGATTTTTACTCATGGCAAATCGA 57.242 33.333 0.00 0.00 38.39 3.59
134 135 7.164171 CGTTAGATTTTTACTCATGGCAAATCG 59.836 37.037 0.00 0.00 38.39 3.34
135 136 7.968405 ACGTTAGATTTTTACTCATGGCAAATC 59.032 33.333 0.00 0.00 35.11 2.17
136 137 7.826690 ACGTTAGATTTTTACTCATGGCAAAT 58.173 30.769 0.00 0.00 0.00 2.32
137 138 7.209471 ACGTTAGATTTTTACTCATGGCAAA 57.791 32.000 0.00 0.00 0.00 3.68
138 139 6.811253 ACGTTAGATTTTTACTCATGGCAA 57.189 33.333 0.00 0.00 0.00 4.52
139 140 6.811253 AACGTTAGATTTTTACTCATGGCA 57.189 33.333 0.00 0.00 0.00 4.92
140 141 8.193250 TCTAACGTTAGATTTTTACTCATGGC 57.807 34.615 29.57 0.00 34.99 4.40
154 155 8.921205 AGGAAAGGCTAAATATCTAACGTTAGA 58.079 33.333 33.62 33.62 43.35 2.10
157 158 9.490379 CATAGGAAAGGCTAAATATCTAACGTT 57.510 33.333 5.88 5.88 0.00 3.99
158 159 8.648693 ACATAGGAAAGGCTAAATATCTAACGT 58.351 33.333 0.00 0.00 0.00 3.99
159 160 9.490379 AACATAGGAAAGGCTAAATATCTAACG 57.510 33.333 0.00 0.00 0.00 3.18
171 172 8.981659 AGCATAAAATAAAACATAGGAAAGGCT 58.018 29.630 0.00 0.00 0.00 4.58
194 195 9.463443 GCTATTTTCTTCTTCTTTTGTTTAGCA 57.537 29.630 0.00 0.00 0.00 3.49
195 196 9.463443 TGCTATTTTCTTCTTCTTTTGTTTAGC 57.537 29.630 0.00 0.00 0.00 3.09
198 199 9.822185 ACATGCTATTTTCTTCTTCTTTTGTTT 57.178 25.926 0.00 0.00 0.00 2.83
201 202 9.565213 CCTACATGCTATTTTCTTCTTCTTTTG 57.435 33.333 0.00 0.00 0.00 2.44
202 203 9.520515 TCCTACATGCTATTTTCTTCTTCTTTT 57.479 29.630 0.00 0.00 0.00 2.27
203 204 8.951243 GTCCTACATGCTATTTTCTTCTTCTTT 58.049 33.333 0.00 0.00 0.00 2.52
204 205 7.554476 GGTCCTACATGCTATTTTCTTCTTCTT 59.446 37.037 0.00 0.00 0.00 2.52
205 206 7.051000 GGTCCTACATGCTATTTTCTTCTTCT 58.949 38.462 0.00 0.00 0.00 2.85
206 207 6.823689 TGGTCCTACATGCTATTTTCTTCTTC 59.176 38.462 0.00 0.00 0.00 2.87
207 208 6.721318 TGGTCCTACATGCTATTTTCTTCTT 58.279 36.000 0.00 0.00 0.00 2.52
208 209 6.313519 TGGTCCTACATGCTATTTTCTTCT 57.686 37.500 0.00 0.00 0.00 2.85
209 210 6.458888 GCTTGGTCCTACATGCTATTTTCTTC 60.459 42.308 0.00 0.00 38.19 2.87
210 211 5.358160 GCTTGGTCCTACATGCTATTTTCTT 59.642 40.000 0.00 0.00 38.19 2.52
211 212 4.884164 GCTTGGTCCTACATGCTATTTTCT 59.116 41.667 0.00 0.00 38.19 2.52
212 213 4.640201 TGCTTGGTCCTACATGCTATTTTC 59.360 41.667 0.00 0.00 40.83 2.29
213 214 4.599041 TGCTTGGTCCTACATGCTATTTT 58.401 39.130 0.00 0.00 40.83 1.82
214 215 4.235079 TGCTTGGTCCTACATGCTATTT 57.765 40.909 0.00 0.00 40.83 1.40
215 216 3.931907 TGCTTGGTCCTACATGCTATT 57.068 42.857 0.00 0.00 40.83 1.73
216 217 3.931907 TTGCTTGGTCCTACATGCTAT 57.068 42.857 0.00 0.00 40.83 2.97
217 218 3.712016 TTTGCTTGGTCCTACATGCTA 57.288 42.857 0.00 0.00 40.83 3.49
218 219 2.584835 TTTGCTTGGTCCTACATGCT 57.415 45.000 0.00 0.00 40.83 3.79
219 220 3.658757 TTTTTGCTTGGTCCTACATGC 57.341 42.857 0.00 0.00 40.67 4.06
220 221 5.389859 TCATTTTTGCTTGGTCCTACATG 57.610 39.130 0.00 0.00 0.00 3.21
221 222 6.418057 TTTCATTTTTGCTTGGTCCTACAT 57.582 33.333 0.00 0.00 0.00 2.29
222 223 5.860941 TTTCATTTTTGCTTGGTCCTACA 57.139 34.783 0.00 0.00 0.00 2.74
223 224 8.825667 TTTATTTCATTTTTGCTTGGTCCTAC 57.174 30.769 0.00 0.00 0.00 3.18
225 226 9.657419 CTATTTATTTCATTTTTGCTTGGTCCT 57.343 29.630 0.00 0.00 0.00 3.85
226 227 9.435688 ACTATTTATTTCATTTTTGCTTGGTCC 57.564 29.630 0.00 0.00 0.00 4.46
228 229 9.777297 ACACTATTTATTTCATTTTTGCTTGGT 57.223 25.926 0.00 0.00 0.00 3.67
252 253 8.777578 AGTAATATCCCAAGTGTCTACATACA 57.222 34.615 0.00 0.00 0.00 2.29
255 256 9.435570 AGTAAGTAATATCCCAAGTGTCTACAT 57.564 33.333 0.00 0.00 0.00 2.29
256 257 8.834004 AGTAAGTAATATCCCAAGTGTCTACA 57.166 34.615 0.00 0.00 0.00 2.74
260 261 9.322773 GGTAAAGTAAGTAATATCCCAAGTGTC 57.677 37.037 0.00 0.00 0.00 3.67
261 262 8.828751 TGGTAAAGTAAGTAATATCCCAAGTGT 58.171 33.333 0.00 0.00 0.00 3.55
262 263 9.675464 TTGGTAAAGTAAGTAATATCCCAAGTG 57.325 33.333 0.00 0.00 0.00 3.16
266 267 9.127277 GCAATTGGTAAAGTAAGTAATATCCCA 57.873 33.333 7.72 0.00 0.00 4.37
267 268 8.573885 GGCAATTGGTAAAGTAAGTAATATCCC 58.426 37.037 7.72 0.00 0.00 3.85
268 269 9.127277 TGGCAATTGGTAAAGTAAGTAATATCC 57.873 33.333 7.72 0.00 0.00 2.59
269 270 9.946165 GTGGCAATTGGTAAAGTAAGTAATATC 57.054 33.333 7.72 0.00 0.00 1.63
270 271 8.909923 GGTGGCAATTGGTAAAGTAAGTAATAT 58.090 33.333 7.72 0.00 0.00 1.28
271 272 8.110908 AGGTGGCAATTGGTAAAGTAAGTAATA 58.889 33.333 7.72 0.00 0.00 0.98
272 273 6.951778 AGGTGGCAATTGGTAAAGTAAGTAAT 59.048 34.615 7.72 0.00 0.00 1.89
273 274 6.308566 AGGTGGCAATTGGTAAAGTAAGTAA 58.691 36.000 7.72 0.00 0.00 2.24
274 275 5.883180 AGGTGGCAATTGGTAAAGTAAGTA 58.117 37.500 7.72 0.00 0.00 2.24
275 276 4.736473 AGGTGGCAATTGGTAAAGTAAGT 58.264 39.130 7.72 0.00 0.00 2.24
276 277 5.010282 AGAGGTGGCAATTGGTAAAGTAAG 58.990 41.667 7.72 0.00 0.00 2.34
277 278 4.993028 AGAGGTGGCAATTGGTAAAGTAA 58.007 39.130 7.72 0.00 0.00 2.24
278 279 4.650972 AGAGGTGGCAATTGGTAAAGTA 57.349 40.909 7.72 0.00 0.00 2.24
279 280 3.525800 AGAGGTGGCAATTGGTAAAGT 57.474 42.857 7.72 0.00 0.00 2.66
280 281 4.280677 TCAAAGAGGTGGCAATTGGTAAAG 59.719 41.667 7.72 0.00 0.00 1.85
281 282 4.219115 TCAAAGAGGTGGCAATTGGTAAA 58.781 39.130 7.72 0.00 0.00 2.01
282 283 3.838565 TCAAAGAGGTGGCAATTGGTAA 58.161 40.909 7.72 0.00 0.00 2.85
283 284 3.517296 TCAAAGAGGTGGCAATTGGTA 57.483 42.857 7.72 0.00 0.00 3.25
284 285 2.380064 TCAAAGAGGTGGCAATTGGT 57.620 45.000 7.72 0.00 0.00 3.67
285 286 2.827322 TCATCAAAGAGGTGGCAATTGG 59.173 45.455 7.72 0.00 0.00 3.16
286 287 4.240096 GTTCATCAAAGAGGTGGCAATTG 58.760 43.478 0.00 0.00 0.00 2.32
287 288 3.259123 GGTTCATCAAAGAGGTGGCAATT 59.741 43.478 0.00 0.00 0.00 2.32
288 289 2.827921 GGTTCATCAAAGAGGTGGCAAT 59.172 45.455 0.00 0.00 0.00 3.56
289 290 2.238521 GGTTCATCAAAGAGGTGGCAA 58.761 47.619 0.00 0.00 0.00 4.52
290 291 1.144708 TGGTTCATCAAAGAGGTGGCA 59.855 47.619 0.00 0.00 0.00 4.92
291 292 1.909700 TGGTTCATCAAAGAGGTGGC 58.090 50.000 0.00 0.00 0.00 5.01
292 293 3.623060 CGTATGGTTCATCAAAGAGGTGG 59.377 47.826 0.00 0.00 0.00 4.61
293 294 4.503910 TCGTATGGTTCATCAAAGAGGTG 58.496 43.478 0.00 0.00 0.00 4.00
294 295 4.819105 TCGTATGGTTCATCAAAGAGGT 57.181 40.909 0.00 0.00 0.00 3.85
295 296 5.605534 AGATCGTATGGTTCATCAAAGAGG 58.394 41.667 0.00 0.00 0.00 3.69
296 297 5.400782 CGAGATCGTATGGTTCATCAAAGAG 59.599 44.000 0.00 0.00 34.11 2.85
297 298 5.067283 TCGAGATCGTATGGTTCATCAAAGA 59.933 40.000 1.70 0.00 40.80 2.52
298 299 5.281727 TCGAGATCGTATGGTTCATCAAAG 58.718 41.667 1.70 0.00 40.80 2.77
299 300 5.257082 TCGAGATCGTATGGTTCATCAAA 57.743 39.130 1.70 0.00 40.80 2.69
300 301 4.911514 TCGAGATCGTATGGTTCATCAA 57.088 40.909 1.70 0.00 40.80 2.57
301 302 4.082733 GGATCGAGATCGTATGGTTCATCA 60.083 45.833 6.96 0.00 38.69 3.07
302 303 4.082733 TGGATCGAGATCGTATGGTTCATC 60.083 45.833 6.96 0.00 38.69 2.92
303 304 3.826729 TGGATCGAGATCGTATGGTTCAT 59.173 43.478 6.96 0.00 38.69 2.57
304 305 3.219281 TGGATCGAGATCGTATGGTTCA 58.781 45.455 6.96 0.00 38.69 3.18
305 306 3.917329 TGGATCGAGATCGTATGGTTC 57.083 47.619 6.96 0.00 38.69 3.62
306 307 3.550233 CGTTGGATCGAGATCGTATGGTT 60.550 47.826 6.96 0.00 38.69 3.67
307 308 2.031069 CGTTGGATCGAGATCGTATGGT 60.031 50.000 6.96 0.00 38.69 3.55
308 309 2.585845 CGTTGGATCGAGATCGTATGG 58.414 52.381 6.96 0.00 38.69 2.74
309 310 1.979469 GCGTTGGATCGAGATCGTATG 59.021 52.381 6.96 4.56 38.69 2.39
310 311 1.068472 GGCGTTGGATCGAGATCGTAT 60.068 52.381 6.96 0.00 38.69 3.06
311 312 0.309922 GGCGTTGGATCGAGATCGTA 59.690 55.000 6.96 0.00 38.69 3.43
312 313 1.065928 GGCGTTGGATCGAGATCGT 59.934 57.895 6.96 0.00 38.69 3.73
313 314 1.661821 GGGCGTTGGATCGAGATCG 60.662 63.158 6.96 0.00 38.69 3.69
314 315 1.661821 CGGGCGTTGGATCGAGATC 60.662 63.158 4.58 4.58 37.11 2.75
315 316 2.417516 CGGGCGTTGGATCGAGAT 59.582 61.111 0.00 0.00 0.00 2.75
316 317 3.833645 CCGGGCGTTGGATCGAGA 61.834 66.667 0.00 0.00 0.00 4.04
317 318 2.644555 AATCCGGGCGTTGGATCGAG 62.645 60.000 0.00 0.00 45.46 4.04
318 319 1.393487 TAATCCGGGCGTTGGATCGA 61.393 55.000 0.00 0.00 45.46 3.59
319 320 0.944311 CTAATCCGGGCGTTGGATCG 60.944 60.000 0.00 0.00 45.46 3.69
320 321 0.391597 TCTAATCCGGGCGTTGGATC 59.608 55.000 0.00 0.00 45.46 3.36
322 323 1.518774 GTCTAATCCGGGCGTTGGA 59.481 57.895 0.00 0.00 40.46 3.53
323 324 1.523032 GGTCTAATCCGGGCGTTGG 60.523 63.158 0.00 0.00 0.00 3.77
324 325 1.523032 GGGTCTAATCCGGGCGTTG 60.523 63.158 0.00 0.00 0.00 4.10
325 326 2.738938 GGGGTCTAATCCGGGCGTT 61.739 63.158 0.00 0.00 0.00 4.84
326 327 3.159347 GGGGTCTAATCCGGGCGT 61.159 66.667 0.00 0.00 0.00 5.68
327 328 2.842936 AGGGGTCTAATCCGGGCG 60.843 66.667 0.00 0.00 0.00 6.13
328 329 2.517798 GGAGGGGTCTAATCCGGGC 61.518 68.421 0.00 0.00 0.00 6.13
329 330 1.842010 GGGAGGGGTCTAATCCGGG 60.842 68.421 0.00 0.00 33.68 5.73
330 331 0.473886 ATGGGAGGGGTCTAATCCGG 60.474 60.000 0.00 0.00 33.68 5.14
331 332 0.977395 GATGGGAGGGGTCTAATCCG 59.023 60.000 0.00 0.00 33.68 4.18
332 333 1.700186 GTGATGGGAGGGGTCTAATCC 59.300 57.143 0.00 0.00 0.00 3.01
333 334 2.695585 AGTGATGGGAGGGGTCTAATC 58.304 52.381 0.00 0.00 0.00 1.75
334 335 2.897823 AGTGATGGGAGGGGTCTAAT 57.102 50.000 0.00 0.00 0.00 1.73
335 336 2.863238 TCTAGTGATGGGAGGGGTCTAA 59.137 50.000 0.00 0.00 0.00 2.10
336 337 2.177233 GTCTAGTGATGGGAGGGGTCTA 59.823 54.545 0.00 0.00 0.00 2.59
337 338 1.062810 GTCTAGTGATGGGAGGGGTCT 60.063 57.143 0.00 0.00 0.00 3.85
338 339 1.415200 GTCTAGTGATGGGAGGGGTC 58.585 60.000 0.00 0.00 0.00 4.46
339 340 0.031010 GGTCTAGTGATGGGAGGGGT 60.031 60.000 0.00 0.00 0.00 4.95
340 341 0.266152 AGGTCTAGTGATGGGAGGGG 59.734 60.000 0.00 0.00 0.00 4.79
341 342 2.043227 GAAGGTCTAGTGATGGGAGGG 58.957 57.143 0.00 0.00 0.00 4.30
342 343 2.043227 GGAAGGTCTAGTGATGGGAGG 58.957 57.143 0.00 0.00 0.00 4.30
343 344 2.043227 GGGAAGGTCTAGTGATGGGAG 58.957 57.143 0.00 0.00 0.00 4.30
344 345 1.688311 CGGGAAGGTCTAGTGATGGGA 60.688 57.143 0.00 0.00 0.00 4.37
345 346 0.753262 CGGGAAGGTCTAGTGATGGG 59.247 60.000 0.00 0.00 0.00 4.00
346 347 1.486211 ACGGGAAGGTCTAGTGATGG 58.514 55.000 0.00 0.00 0.00 3.51
347 348 3.553096 GCATACGGGAAGGTCTAGTGATG 60.553 52.174 0.00 0.00 0.00 3.07
348 349 2.628657 GCATACGGGAAGGTCTAGTGAT 59.371 50.000 0.00 0.00 0.00 3.06
349 350 2.029623 GCATACGGGAAGGTCTAGTGA 58.970 52.381 0.00 0.00 0.00 3.41
350 351 1.754803 TGCATACGGGAAGGTCTAGTG 59.245 52.381 0.00 0.00 0.00 2.74
351 352 2.154567 TGCATACGGGAAGGTCTAGT 57.845 50.000 0.00 0.00 0.00 2.57
352 353 3.753294 AATGCATACGGGAAGGTCTAG 57.247 47.619 0.00 0.00 0.00 2.43
353 354 3.181458 GGAAATGCATACGGGAAGGTCTA 60.181 47.826 0.00 0.00 0.00 2.59
354 355 2.421529 GGAAATGCATACGGGAAGGTCT 60.422 50.000 0.00 0.00 0.00 3.85
355 356 1.947456 GGAAATGCATACGGGAAGGTC 59.053 52.381 0.00 0.00 0.00 3.85
356 357 1.745827 CGGAAATGCATACGGGAAGGT 60.746 52.381 0.00 0.00 0.00 3.50
357 358 0.944386 CGGAAATGCATACGGGAAGG 59.056 55.000 0.00 0.00 0.00 3.46
358 359 0.307760 GCGGAAATGCATACGGGAAG 59.692 55.000 16.67 1.16 34.15 3.46
359 360 0.393132 TGCGGAAATGCATACGGGAA 60.393 50.000 16.67 0.00 40.62 3.97
360 361 0.393132 TTGCGGAAATGCATACGGGA 60.393 50.000 16.67 9.85 45.78 5.14
361 362 0.029300 CTTGCGGAAATGCATACGGG 59.971 55.000 16.67 2.76 45.78 5.28
362 363 0.592247 GCTTGCGGAAATGCATACGG 60.592 55.000 16.67 11.76 45.78 4.02
363 364 0.098552 TGCTTGCGGAAATGCATACG 59.901 50.000 0.00 6.82 45.78 3.06
364 365 2.497107 ATGCTTGCGGAAATGCATAC 57.503 45.000 13.49 0.00 45.78 2.39
365 366 2.030893 GCTATGCTTGCGGAAATGCATA 60.031 45.455 18.20 18.20 45.78 3.14
366 367 1.269413 GCTATGCTTGCGGAAATGCAT 60.269 47.619 17.94 17.94 45.78 3.96
367 368 0.101040 GCTATGCTTGCGGAAATGCA 59.899 50.000 6.07 6.07 44.61 3.96
368 369 0.595825 GGCTATGCTTGCGGAAATGC 60.596 55.000 0.00 0.00 0.00 3.56
369 370 0.740149 TGGCTATGCTTGCGGAAATG 59.260 50.000 0.00 0.00 0.00 2.32
370 371 0.740737 GTGGCTATGCTTGCGGAAAT 59.259 50.000 0.00 0.00 0.00 2.17
371 372 0.607762 TGTGGCTATGCTTGCGGAAA 60.608 50.000 0.00 0.00 0.00 3.13
372 373 0.394216 ATGTGGCTATGCTTGCGGAA 60.394 50.000 0.00 0.00 0.00 4.30
373 374 0.467804 TATGTGGCTATGCTTGCGGA 59.532 50.000 0.00 0.00 0.00 5.54
374 375 0.588252 GTATGTGGCTATGCTTGCGG 59.412 55.000 0.00 0.00 0.00 5.69
375 376 1.262417 CAGTATGTGGCTATGCTTGCG 59.738 52.381 0.00 0.00 0.00 4.85
376 377 1.002033 GCAGTATGTGGCTATGCTTGC 60.002 52.381 0.00 0.00 39.31 4.01
386 387 0.321210 TCGGTGTTGGCAGTATGTGG 60.321 55.000 0.00 0.00 39.31 4.17
387 388 1.196808 GTTCGGTGTTGGCAGTATGTG 59.803 52.381 0.00 0.00 39.31 3.21
388 389 1.519408 GTTCGGTGTTGGCAGTATGT 58.481 50.000 0.00 0.00 39.31 2.29
389 390 0.802494 GGTTCGGTGTTGGCAGTATG 59.198 55.000 0.00 0.00 40.87 2.39
390 391 0.398696 TGGTTCGGTGTTGGCAGTAT 59.601 50.000 0.00 0.00 0.00 2.12
419 420 4.348863 AATTGGTAATGGTTTTGCTGCA 57.651 36.364 0.00 0.00 0.00 4.41
450 475 7.553034 CGACGCGTAAAATAAATAGACTGAAT 58.447 34.615 13.97 0.00 0.00 2.57
464 489 1.355796 CTGGATGGCGACGCGTAAAA 61.356 55.000 13.97 0.00 0.00 1.52
465 490 1.807981 CTGGATGGCGACGCGTAAA 60.808 57.895 13.97 0.00 0.00 2.01
500 525 1.291132 GCCAACGATAGAAGCTGACC 58.709 55.000 0.00 0.00 41.38 4.02
512 537 3.904800 TTCATATCAAGAGGCCAACGA 57.095 42.857 5.01 0.00 0.00 3.85
533 558 5.829391 GGAGGGAAAAACCTGTGTACTTTAA 59.171 40.000 0.00 0.00 42.10 1.52
534 559 5.104024 TGGAGGGAAAAACCTGTGTACTTTA 60.104 40.000 0.00 0.00 42.10 1.85
540 565 2.666317 CTTGGAGGGAAAAACCTGTGT 58.334 47.619 0.00 0.00 42.10 3.72
584 610 0.320697 GTGTACACTGACCCCTGGAC 59.679 60.000 18.92 0.00 0.00 4.02
594 620 1.340248 ACAAGGACGAGGTGTACACTG 59.660 52.381 24.55 16.71 31.81 3.66
600 626 0.544697 AAACCACAAGGACGAGGTGT 59.455 50.000 0.00 0.00 38.69 4.16
605 632 4.370917 GTTACTGTAAACCACAAGGACGA 58.629 43.478 1.10 0.00 36.48 4.20
618 645 8.136563 TGTATGATGTTAGTGGGTTACTGTAA 57.863 34.615 0.00 0.00 40.65 2.41
640 667 6.828273 AGCTGTCAAGGTGCAATTATATTGTA 59.172 34.615 0.00 0.00 31.35 2.41
641 668 5.653769 AGCTGTCAAGGTGCAATTATATTGT 59.346 36.000 0.00 0.00 31.35 2.71
642 669 5.975344 CAGCTGTCAAGGTGCAATTATATTG 59.025 40.000 5.25 0.00 44.39 1.90
643 670 6.140303 CAGCTGTCAAGGTGCAATTATATT 57.860 37.500 5.25 0.00 44.39 1.28
644 671 5.762825 CAGCTGTCAAGGTGCAATTATAT 57.237 39.130 5.25 0.00 44.39 0.86
729 758 3.864789 AGGCAGGTTCTTCAGAAAGAA 57.135 42.857 0.00 0.00 46.72 2.52
730 759 3.864789 AAGGCAGGTTCTTCAGAAAGA 57.135 42.857 0.00 0.00 39.78 2.52
731 760 4.555511 CGAAAAGGCAGGTTCTTCAGAAAG 60.556 45.833 0.00 0.00 35.58 2.62
734 763 2.158813 ACGAAAAGGCAGGTTCTTCAGA 60.159 45.455 0.00 0.00 0.00 3.27
771 800 7.446013 TGTCGTTTTTCCTTATTAACTGACCAT 59.554 33.333 0.00 0.00 0.00 3.55
772 801 6.766944 TGTCGTTTTTCCTTATTAACTGACCA 59.233 34.615 0.00 0.00 0.00 4.02
774 803 7.585210 GTGTGTCGTTTTTCCTTATTAACTGAC 59.415 37.037 0.00 0.00 0.00 3.51
775 804 7.280428 TGTGTGTCGTTTTTCCTTATTAACTGA 59.720 33.333 0.00 0.00 0.00 3.41
793 822 1.258720 CTGATGTGTGTGTGTGTGTCG 59.741 52.381 0.00 0.00 0.00 4.35
817 880 2.335316 TCGTTTGGTACACAGCCTTT 57.665 45.000 0.00 0.00 39.29 3.11
859 927 2.660362 GCTTTGTTTTCGACTCTGCTCG 60.660 50.000 0.00 0.00 34.83 5.03
862 930 1.663494 CGCTTTGTTTTCGACTCTGC 58.337 50.000 0.00 0.00 0.00 4.26
878 946 1.147153 GCTCCCTATCTTTGGCGCT 59.853 57.895 7.64 0.00 0.00 5.92
882 950 3.944015 CAGAAACTGCTCCCTATCTTTGG 59.056 47.826 0.00 0.00 0.00 3.28
908 977 1.000506 AGCTTCTTCTTGACCGCGTTA 59.999 47.619 4.92 0.00 0.00 3.18
909 978 0.249911 AGCTTCTTCTTGACCGCGTT 60.250 50.000 4.92 0.00 0.00 4.84
972 1041 3.906846 AGTTCCAACTCAGTGATTCTCCT 59.093 43.478 0.00 0.00 32.86 3.69
974 1043 4.453819 CCAAGTTCCAACTCAGTGATTCTC 59.546 45.833 0.00 0.00 38.57 2.87
1040 1109 0.985549 CAGCGTCGAAGTAGAAGCAC 59.014 55.000 0.00 0.00 45.69 4.40
1069 1138 2.783379 ATGGAGATGTAGGAGCTGGA 57.217 50.000 0.00 0.00 0.00 3.86
1120 1189 2.995547 GGTGGGGACTATTGCCGT 59.004 61.111 0.00 0.00 32.69 5.68
1121 1190 2.203015 CGGTGGGGACTATTGCCG 60.203 66.667 0.00 0.00 32.69 5.69
1122 1191 1.146263 CTCGGTGGGGACTATTGCC 59.854 63.158 0.00 0.00 0.00 4.52
1129 1198 3.391382 CCCTGTCTCGGTGGGGAC 61.391 72.222 0.00 0.00 41.25 4.46
1139 1208 0.631753 TGGAGCTACTAGCCCTGTCT 59.368 55.000 4.32 0.00 43.77 3.41
1140 1209 1.036707 CTGGAGCTACTAGCCCTGTC 58.963 60.000 4.32 0.00 43.77 3.51
1147 1266 4.581105 TCCGGCTGGAGCTACTAG 57.419 61.111 11.27 0.00 40.17 2.57
1156 1275 1.070445 GATCCTGATGTCCGGCTGG 59.930 63.158 4.71 4.71 0.00 4.85
1160 1279 1.274728 GATCCTGATCCTGATGTCCGG 59.725 57.143 0.00 0.00 31.76 5.14
1161 1280 1.966354 TGATCCTGATCCTGATGTCCG 59.034 52.381 4.76 0.00 37.02 4.79
1162 1281 2.302445 CCTGATCCTGATCCTGATGTCC 59.698 54.545 4.76 0.00 37.02 4.02
1163 1282 3.237746 TCCTGATCCTGATCCTGATGTC 58.762 50.000 4.76 0.00 37.02 3.06
1164 1283 3.341318 TCCTGATCCTGATCCTGATGT 57.659 47.619 4.76 0.00 37.02 3.06
1165 1284 4.475051 GATCCTGATCCTGATCCTGATG 57.525 50.000 11.14 0.00 37.02 3.07
1362 1481 6.780706 ACCACTTGTATCAAAGAAAGTACG 57.219 37.500 0.00 0.00 31.80 3.67
1476 1595 1.272092 TGCACCAGGAAAGGGAAGATG 60.272 52.381 0.00 0.00 0.00 2.90
1530 8199 4.530875 CTGATAAAGATGCACCTCCCTTT 58.469 43.478 0.00 0.00 33.87 3.11
1533 8202 2.225467 GCTGATAAAGATGCACCTCCC 58.775 52.381 0.00 0.00 0.00 4.30
1632 8301 7.147724 CCTTGTGGGACTACTTCAGATGTATAA 60.148 40.741 0.00 0.00 37.23 0.98
1653 8322 2.239654 CTCATGGATACCACCACCTTGT 59.760 50.000 0.00 0.00 43.03 3.16
1686 8355 7.119116 AGCAGTGACACGATATATTTCAACAAA 59.881 33.333 0.00 0.00 0.00 2.83
1692 8361 5.175856 GTCCAGCAGTGACACGATATATTTC 59.824 44.000 0.00 0.00 32.91 2.17
1698 8367 1.253100 TGTCCAGCAGTGACACGATA 58.747 50.000 0.00 0.00 37.80 2.92
1702 8371 0.877071 CCATTGTCCAGCAGTGACAC 59.123 55.000 0.00 0.00 42.13 3.67
1710 8379 1.134159 AGAGATCTGCCATTGTCCAGC 60.134 52.381 0.00 0.00 0.00 4.85
1724 8393 5.746245 CCGACAAGTATGAGTTTGAGAGATC 59.254 44.000 0.00 0.00 0.00 2.75
1725 8394 5.655488 CCGACAAGTATGAGTTTGAGAGAT 58.345 41.667 0.00 0.00 0.00 2.75
1734 8403 3.610040 TCATTGCCGACAAGTATGAGT 57.390 42.857 0.00 0.00 39.69 3.41
1735 8404 3.684305 TGTTCATTGCCGACAAGTATGAG 59.316 43.478 0.00 0.00 39.69 2.90
1749 8418 2.621998 GCCATCCTGATCCTGTTCATTG 59.378 50.000 0.00 0.00 0.00 2.82
1750 8419 2.242965 TGCCATCCTGATCCTGTTCATT 59.757 45.455 0.00 0.00 0.00 2.57
1762 8431 2.159014 CCATTTCAACCATGCCATCCTG 60.159 50.000 0.00 0.00 0.00 3.86
1763 8432 2.112998 CCATTTCAACCATGCCATCCT 58.887 47.619 0.00 0.00 0.00 3.24
1764 8433 2.101917 CTCCATTTCAACCATGCCATCC 59.898 50.000 0.00 0.00 0.00 3.51
1765 8434 3.025978 TCTCCATTTCAACCATGCCATC 58.974 45.455 0.00 0.00 0.00 3.51
1766 8435 2.762327 GTCTCCATTTCAACCATGCCAT 59.238 45.455 0.00 0.00 0.00 4.40
1767 8436 2.170166 GTCTCCATTTCAACCATGCCA 58.830 47.619 0.00 0.00 0.00 4.92
1772 8441 1.522668 CAGCGTCTCCATTTCAACCA 58.477 50.000 0.00 0.00 0.00 3.67
1778 8447 1.741706 CATCTTGCAGCGTCTCCATTT 59.258 47.619 0.00 0.00 0.00 2.32
1798 8467 2.675348 GACAGATCAAGGTAGCAACAGC 59.325 50.000 0.00 0.00 0.00 4.40
1817 8486 4.456911 TCTCAAGCATGATTTCCAAGTGAC 59.543 41.667 0.00 0.00 34.37 3.67
1901 8570 4.488126 TCTACTTGATGCAACACAAAGC 57.512 40.909 0.00 0.00 0.00 3.51
1953 8622 1.177401 GGTGCTTCAGAACCCAATCC 58.823 55.000 0.00 0.00 37.82 3.01
1999 8668 3.505680 TCCCAAGAAATGTTGATGAACCG 59.494 43.478 0.00 0.00 0.00 4.44
2000 8669 5.467035 TTCCCAAGAAATGTTGATGAACC 57.533 39.130 0.00 0.00 0.00 3.62
2045 8714 7.790823 AAGATTTGGATTTTGTTGGTCTTTG 57.209 32.000 0.00 0.00 0.00 2.77
2063 8732 6.431234 CAGTGTTGGTAGGCTAGAAAAGATTT 59.569 38.462 0.00 0.00 0.00 2.17
2112 8781 7.356089 TGTCTTCTGAGTCCAGTAAGTTTTA 57.644 36.000 0.00 0.00 41.16 1.52
2193 8862 3.236047 TGTACTGTAAGCCTGGACAAGA 58.764 45.455 0.00 0.00 37.60 3.02
2199 8868 4.161565 TCAAGGTATGTACTGTAAGCCTGG 59.838 45.833 0.00 0.00 37.60 4.45
2280 8949 4.818546 CCTTCAAACAGATCTGACAACAGT 59.181 41.667 29.27 1.44 43.81 3.55
2284 8953 7.337689 CCATTATCCTTCAAACAGATCTGACAA 59.662 37.037 29.27 13.44 0.00 3.18
2577 9284 9.872757 GTGTCAAGAAAACGTCTTATATTTTGA 57.127 29.630 0.00 0.00 45.25 2.69
2584 9291 6.046593 TGACAGTGTCAAGAAAACGTCTTAT 58.953 36.000 23.55 0.00 45.25 1.73
2591 9298 6.701841 TCAGACTATGACAGTGTCAAGAAAAC 59.298 38.462 28.70 17.08 45.96 2.43
2627 9334 4.070716 CCTCTGTCTCAAAATGCAAGACT 58.929 43.478 14.78 0.00 40.07 3.24
2633 9340 3.064900 ACTCCCTCTGTCTCAAAATGC 57.935 47.619 0.00 0.00 0.00 3.56
2663 9370 3.363178 GAGAGTTGTTTTTCTTGGTGCG 58.637 45.455 0.00 0.00 0.00 5.34
2691 9398 1.097547 GCATGCCACGCTCCATTAGT 61.098 55.000 6.36 0.00 0.00 2.24
2693 9400 1.823470 GGCATGCCACGCTCCATTA 60.823 57.895 32.08 0.00 35.81 1.90
2714 9421 0.110328 CTACTACCGGATAGTGCGCG 60.110 60.000 20.36 0.00 44.30 6.86
2717 9424 2.692041 ACCAACTACTACCGGATAGTGC 59.308 50.000 20.36 0.00 44.30 4.40
2727 9434 8.767478 TGCAACTCTTTATAACCAACTACTAC 57.233 34.615 0.00 0.00 0.00 2.73
2778 9485 6.615088 GTCAACACAACATCTGCTGAATATT 58.385 36.000 0.00 0.00 0.00 1.28
2779 9486 5.163824 CGTCAACACAACATCTGCTGAATAT 60.164 40.000 0.00 0.00 0.00 1.28
2787 9494 0.874390 CCCCGTCAACACAACATCTG 59.126 55.000 0.00 0.00 0.00 2.90
2809 9516 5.833131 TCAACTGGGAAGAAATTAAAGTGCT 59.167 36.000 0.00 0.00 0.00 4.40
2829 9536 2.754552 TGAATGCCTTGTAGCCATCAAC 59.245 45.455 0.00 0.00 0.00 3.18
2837 9544 0.583438 CGCGGATGAATGCCTTGTAG 59.417 55.000 0.00 0.00 0.00 2.74
2838 9545 1.436195 GCGCGGATGAATGCCTTGTA 61.436 55.000 8.83 0.00 0.00 2.41
2880 9588 5.411781 TCTGCGATACTTTCTTTCTCTTCC 58.588 41.667 0.00 0.00 0.00 3.46
2901 9609 6.546428 ACAGTATTAGTAGCCACACATTCT 57.454 37.500 0.00 0.00 0.00 2.40
2905 9613 5.479027 TCAGAACAGTATTAGTAGCCACACA 59.521 40.000 0.00 0.00 0.00 3.72
2906 9614 5.805994 GTCAGAACAGTATTAGTAGCCACAC 59.194 44.000 0.00 0.00 0.00 3.82
2969 9677 5.053978 AGAAGTCTTTCCATTGTTCCTGT 57.946 39.130 0.00 0.00 33.64 4.00
2978 9686 2.238395 GCTCCCAGAGAAGTCTTTCCAT 59.762 50.000 0.00 0.00 33.64 3.41
2981 9689 3.409026 TTGCTCCCAGAGAAGTCTTTC 57.591 47.619 0.00 0.00 0.00 2.62
2982 9690 3.683802 CATTGCTCCCAGAGAAGTCTTT 58.316 45.455 0.00 0.00 0.00 2.52
2983 9691 2.617532 GCATTGCTCCCAGAGAAGTCTT 60.618 50.000 0.16 0.00 0.00 3.01
2987 9695 2.996249 TAGCATTGCTCCCAGAGAAG 57.004 50.000 15.81 0.00 40.44 2.85
2995 9703 1.780503 ACCCCAATTAGCATTGCTCC 58.219 50.000 15.81 0.00 40.44 4.70
2996 9704 3.555966 ACTACCCCAATTAGCATTGCTC 58.444 45.455 15.81 0.00 40.44 4.26
2999 9707 7.823745 ATCTAAACTACCCCAATTAGCATTG 57.176 36.000 0.00 0.00 39.79 2.82
3026 9734 6.664515 TGAACCTGTGAAAGCTATTAAAACG 58.335 36.000 0.00 0.00 0.00 3.60
3031 9739 5.972935 TCGATGAACCTGTGAAAGCTATTA 58.027 37.500 0.00 0.00 0.00 0.98
3044 9752 2.900546 ACTTCAAGGACTCGATGAACCT 59.099 45.455 0.00 0.00 0.00 3.50
3053 9761 5.805728 TCAGGGATTTAACTTCAAGGACTC 58.194 41.667 0.00 0.00 0.00 3.36
3057 9765 5.048013 GGTGTTCAGGGATTTAACTTCAAGG 60.048 44.000 0.00 0.00 0.00 3.61
3136 9844 6.730960 TCATATCTGGTTAACAACGTTTCC 57.269 37.500 8.10 0.00 0.00 3.13
3163 9871 1.684248 GGCTCCTGCAACTCATCCAAT 60.684 52.381 0.00 0.00 41.91 3.16
3228 9936 8.423906 CCTGATCAGGGTAGTACATAATTAGT 57.576 38.462 31.14 0.00 44.87 2.24
3245 9953 1.485480 ACTCAGTCATGGCCTGATCAG 59.515 52.381 16.24 16.24 38.23 2.90
3262 9970 4.734695 GCCAGCAATTATGTGGCTTAACTC 60.735 45.833 14.70 0.00 43.97 3.01
3263 9971 3.131046 GCCAGCAATTATGTGGCTTAACT 59.869 43.478 14.70 0.00 43.97 2.24
3265 9973 2.430332 GGCCAGCAATTATGTGGCTTAA 59.570 45.455 19.14 0.00 45.34 1.85
3266 9974 2.031120 GGCCAGCAATTATGTGGCTTA 58.969 47.619 19.14 0.00 45.34 3.09
3267 9975 0.826062 GGCCAGCAATTATGTGGCTT 59.174 50.000 19.14 0.00 45.34 4.35
3275 9985 1.838112 CCTCAACAGGCCAGCAATTA 58.162 50.000 5.01 0.00 30.98 1.40
3277 9987 4.428845 CCTCAACAGGCCAGCAAT 57.571 55.556 5.01 0.00 30.98 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.