Multiple sequence alignment - TraesCS7A01G332800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G332800 chr7A 100.000 5857 0 0 1 5857 486150144 486156000 0.000000e+00 10816
1 TraesCS7A01G332800 chr7D 97.320 4478 111 6 1062 5535 436504643 436500171 0.000000e+00 7596
2 TraesCS7A01G332800 chr7D 97.653 980 22 1 3035 4013 436523067 436522088 0.000000e+00 1681
3 TraesCS7A01G332800 chr7D 89.759 332 15 9 766 1091 436504964 436504646 1.960000e-109 407
4 TraesCS7A01G332800 chr7D 96.624 237 5 2 5623 5857 436499968 436499733 1.980000e-104 390
5 TraesCS7A01G332800 chr7D 98.485 66 1 0 5562 5627 436500171 436500106 3.710000e-22 117
6 TraesCS7A01G332800 chr7B 90.605 2842 242 15 1062 3897 453144471 453141649 0.000000e+00 3746
7 TraesCS7A01G332800 chr7B 85.632 1037 104 17 4388 5403 453140973 453139961 0.000000e+00 1048
8 TraesCS7A01G332800 chr7B 84.802 454 50 10 3918 4369 453141477 453141041 6.970000e-119 438
9 TraesCS7A01G332800 chr7B 90.179 336 19 8 760 1091 453144799 453144474 5.420000e-115 425
10 TraesCS7A01G332800 chr4A 86.916 214 28 0 472 685 142457691 142457478 2.110000e-59 241
11 TraesCS7A01G332800 chr4D 86.473 207 28 0 470 676 32419030 32418824 1.640000e-55 228
12 TraesCS7A01G332800 chr4D 86.829 205 25 1 470 674 336657263 336657061 1.640000e-55 228
13 TraesCS7A01G332800 chr4D 85.581 215 31 0 470 684 439770553 439770767 5.910000e-55 226
14 TraesCS7A01G332800 chr3A 85.648 216 31 0 470 685 587584936 587584721 1.640000e-55 228
15 TraesCS7A01G332800 chr5B 86.700 203 27 0 472 674 609093284 609093486 5.910000e-55 226
16 TraesCS7A01G332800 chr2B 87.692 195 23 1 472 666 448375775 448375968 5.910000e-55 226
17 TraesCS7A01G332800 chr2A 86.408 206 28 0 470 675 675390457 675390252 5.910000e-55 226
18 TraesCS7A01G332800 chr4B 85.000 220 32 1 470 688 187737001 187737220 7.640000e-54 222
19 TraesCS7A01G332800 chr1D 77.778 216 42 6 43 255 120600547 120600759 1.710000e-25 128
20 TraesCS7A01G332800 chr3B 76.000 225 50 4 31 253 720261525 720261747 4.800000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G332800 chr7A 486150144 486156000 5856 False 10816.00 10816 100.0000 1 5857 1 chr7A.!!$F1 5856
1 TraesCS7A01G332800 chr7D 436499733 436504964 5231 True 2127.50 7596 95.5470 766 5857 4 chr7D.!!$R2 5091
2 TraesCS7A01G332800 chr7D 436522088 436523067 979 True 1681.00 1681 97.6530 3035 4013 1 chr7D.!!$R1 978
3 TraesCS7A01G332800 chr7B 453139961 453144799 4838 True 1414.25 3746 87.8045 760 5403 4 chr7B.!!$R1 4643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.031616 AGGGGAGTTAGGGAGCAGAG 60.032 60.000 0.00 0.00 0.00 3.35 F
34 35 0.032017 GGGAGTTAGGGAGCAGAGGA 60.032 60.000 0.00 0.00 0.00 3.71 F
199 200 0.034059 GGAGGCGGACATACTGGATG 59.966 60.000 0.00 0.00 41.79 3.51 F
404 405 0.038343 ACATTGGATGTTTGCGTGGC 60.038 50.000 0.00 0.00 41.63 5.01 F
405 406 0.038435 CATTGGATGTTTGCGTGGCA 60.038 50.000 0.00 0.00 36.47 4.92 F
742 743 0.041238 TCTGAGGGTCCAACGGAGAT 59.959 55.000 0.00 0.00 29.39 2.75 F
1100 1142 0.103208 CCCAGAATCCGTTCCTCGAG 59.897 60.000 5.13 5.13 42.86 4.04 F
1913 1955 0.402504 TTGGACAAGGGTAACGGCAT 59.597 50.000 0.00 0.00 37.60 4.40 F
2850 2898 1.000060 TGTGAAGGCTTTGCTCATTGC 60.000 47.619 0.00 0.00 43.25 3.56 F
3010 3058 1.479323 CCAACCATGATGGCAAAGAGG 59.521 52.381 12.25 0.83 42.67 3.69 F
3954 4154 3.134804 ACAGGAACTTGTGCAGTAACTCT 59.865 43.478 0.00 0.00 34.60 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 1712 0.526662 CTTCTCGGTGGCTACGAACT 59.473 55.000 5.69 0.00 40.16 3.01 R
1763 1805 1.130777 AAATGCTGCAAAACCACCCT 58.869 45.000 6.36 0.00 0.00 4.34 R
1865 1907 2.158445 GCTCTCATCCCTGGTCTAGGTA 60.158 54.545 1.02 0.00 45.80 3.08 R
2297 2345 1.949525 GCTGCTTGACACTTTCCTCAA 59.050 47.619 0.00 0.00 0.00 3.02 R
2347 2395 7.891183 ACTGATCTTTTACACATGTGTCTAC 57.109 36.000 33.72 18.35 43.74 2.59 R
2736 2784 0.976641 TATTGGCTAGGGATGCTCCG 59.023 55.000 0.00 0.00 37.43 4.63 R
2969 3017 0.961019 TGGTTCTGGTTCTTGCATGC 59.039 50.000 11.82 11.82 0.00 4.06 R
3554 3603 4.406456 TGGTGCATCATCAGGTAAACTTT 58.594 39.130 0.00 0.00 0.00 2.66 R
3954 4154 0.250684 TTCCCTGCAGCATTTCGTGA 60.251 50.000 8.66 0.00 0.00 4.35 R
3958 4158 1.615392 ACTTGTTCCCTGCAGCATTTC 59.385 47.619 8.66 0.00 0.00 2.17 R
5795 6211 0.095935 CACTGTAATGCGCTGACTGC 59.904 55.000 9.73 0.00 38.57 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.899239 GCATGCCGTCGAGGGGAG 62.899 72.222 24.61 16.16 41.48 4.30
20 21 3.461773 CATGCCGTCGAGGGGAGT 61.462 66.667 24.61 10.00 41.48 3.85
21 22 2.683933 ATGCCGTCGAGGGGAGTT 60.684 61.111 24.61 6.11 41.48 3.01
22 23 1.380785 ATGCCGTCGAGGGGAGTTA 60.381 57.895 24.61 0.00 41.48 2.24
23 24 1.392710 ATGCCGTCGAGGGGAGTTAG 61.393 60.000 24.61 0.00 41.48 2.34
24 25 2.783288 GCCGTCGAGGGGAGTTAGG 61.783 68.421 24.61 0.00 41.48 2.69
25 26 2.125961 CCGTCGAGGGGAGTTAGGG 61.126 68.421 16.51 0.00 35.97 3.53
26 27 1.077212 CGTCGAGGGGAGTTAGGGA 60.077 63.158 0.00 0.00 0.00 4.20
27 28 1.102222 CGTCGAGGGGAGTTAGGGAG 61.102 65.000 0.00 0.00 0.00 4.30
28 29 1.076192 TCGAGGGGAGTTAGGGAGC 60.076 63.158 0.00 0.00 0.00 4.70
29 30 1.381327 CGAGGGGAGTTAGGGAGCA 60.381 63.158 0.00 0.00 0.00 4.26
30 31 1.395826 CGAGGGGAGTTAGGGAGCAG 61.396 65.000 0.00 0.00 0.00 4.24
31 32 0.032017 GAGGGGAGTTAGGGAGCAGA 60.032 60.000 0.00 0.00 0.00 4.26
32 33 0.031616 AGGGGAGTTAGGGAGCAGAG 60.032 60.000 0.00 0.00 0.00 3.35
33 34 1.051556 GGGGAGTTAGGGAGCAGAGG 61.052 65.000 0.00 0.00 0.00 3.69
34 35 0.032017 GGGAGTTAGGGAGCAGAGGA 60.032 60.000 0.00 0.00 0.00 3.71
35 36 1.408969 GGAGTTAGGGAGCAGAGGAG 58.591 60.000 0.00 0.00 0.00 3.69
36 37 1.408969 GAGTTAGGGAGCAGAGGAGG 58.591 60.000 0.00 0.00 0.00 4.30
37 38 0.713579 AGTTAGGGAGCAGAGGAGGT 59.286 55.000 0.00 0.00 0.00 3.85
38 39 1.079658 AGTTAGGGAGCAGAGGAGGTT 59.920 52.381 0.00 0.00 0.00 3.50
39 40 1.208293 GTTAGGGAGCAGAGGAGGTTG 59.792 57.143 0.00 0.00 0.00 3.77
40 41 0.710588 TAGGGAGCAGAGGAGGTTGA 59.289 55.000 0.00 0.00 0.00 3.18
41 42 0.178891 AGGGAGCAGAGGAGGTTGAA 60.179 55.000 0.00 0.00 0.00 2.69
42 43 0.915364 GGGAGCAGAGGAGGTTGAAT 59.085 55.000 0.00 0.00 0.00 2.57
43 44 1.407989 GGGAGCAGAGGAGGTTGAATG 60.408 57.143 0.00 0.00 0.00 2.67
44 45 1.377536 GAGCAGAGGAGGTTGAATGC 58.622 55.000 0.00 0.00 0.00 3.56
45 46 0.392193 AGCAGAGGAGGTTGAATGCG 60.392 55.000 0.00 0.00 38.65 4.73
46 47 1.372087 GCAGAGGAGGTTGAATGCGG 61.372 60.000 0.00 0.00 0.00 5.69
47 48 1.078143 AGAGGAGGTTGAATGCGGC 60.078 57.895 0.00 0.00 0.00 6.53
48 49 1.078143 GAGGAGGTTGAATGCGGCT 60.078 57.895 0.00 0.00 0.00 5.52
49 50 1.372087 GAGGAGGTTGAATGCGGCTG 61.372 60.000 0.00 0.00 0.00 4.85
50 51 1.675641 GGAGGTTGAATGCGGCTGT 60.676 57.895 0.00 0.00 0.00 4.40
51 52 1.244019 GGAGGTTGAATGCGGCTGTT 61.244 55.000 0.00 0.00 0.00 3.16
52 53 0.109597 GAGGTTGAATGCGGCTGTTG 60.110 55.000 0.00 0.00 0.00 3.33
53 54 1.734117 GGTTGAATGCGGCTGTTGC 60.734 57.895 0.00 0.00 38.76 4.17
63 64 2.669569 GCTGTTGCCGAGCCTGAA 60.670 61.111 0.00 0.00 0.00 3.02
64 65 2.684843 GCTGTTGCCGAGCCTGAAG 61.685 63.158 0.00 0.00 0.00 3.02
65 66 1.302033 CTGTTGCCGAGCCTGAAGT 60.302 57.895 0.00 0.00 0.00 3.01
66 67 0.886490 CTGTTGCCGAGCCTGAAGTT 60.886 55.000 0.00 0.00 0.00 2.66
67 68 0.465460 TGTTGCCGAGCCTGAAGTTT 60.465 50.000 0.00 0.00 0.00 2.66
68 69 1.202710 TGTTGCCGAGCCTGAAGTTTA 60.203 47.619 0.00 0.00 0.00 2.01
69 70 1.877443 GTTGCCGAGCCTGAAGTTTAA 59.123 47.619 0.00 0.00 0.00 1.52
70 71 2.264005 TGCCGAGCCTGAAGTTTAAA 57.736 45.000 0.00 0.00 0.00 1.52
71 72 2.790433 TGCCGAGCCTGAAGTTTAAAT 58.210 42.857 0.00 0.00 0.00 1.40
72 73 3.945346 TGCCGAGCCTGAAGTTTAAATA 58.055 40.909 0.00 0.00 0.00 1.40
73 74 3.938963 TGCCGAGCCTGAAGTTTAAATAG 59.061 43.478 0.00 0.00 0.00 1.73
74 75 3.242772 GCCGAGCCTGAAGTTTAAATAGC 60.243 47.826 0.00 0.00 0.00 2.97
75 76 3.001330 CCGAGCCTGAAGTTTAAATAGCG 59.999 47.826 0.00 0.00 0.00 4.26
76 77 3.617263 CGAGCCTGAAGTTTAAATAGCGT 59.383 43.478 0.00 0.00 0.00 5.07
77 78 4.492570 CGAGCCTGAAGTTTAAATAGCGTG 60.493 45.833 0.00 0.00 0.00 5.34
78 79 3.127030 AGCCTGAAGTTTAAATAGCGTGC 59.873 43.478 0.00 0.00 0.00 5.34
79 80 3.119990 GCCTGAAGTTTAAATAGCGTGCA 60.120 43.478 0.00 0.00 0.00 4.57
80 81 4.651994 CCTGAAGTTTAAATAGCGTGCAG 58.348 43.478 0.00 0.00 0.00 4.41
81 82 4.391830 CCTGAAGTTTAAATAGCGTGCAGA 59.608 41.667 0.00 0.00 0.00 4.26
82 83 5.065218 CCTGAAGTTTAAATAGCGTGCAGAT 59.935 40.000 0.00 0.00 0.00 2.90
83 84 5.868257 TGAAGTTTAAATAGCGTGCAGATG 58.132 37.500 0.00 0.00 0.00 2.90
84 85 4.882671 AGTTTAAATAGCGTGCAGATGG 57.117 40.909 0.00 0.00 0.00 3.51
85 86 4.261801 AGTTTAAATAGCGTGCAGATGGT 58.738 39.130 0.00 0.00 0.00 3.55
86 87 5.424757 AGTTTAAATAGCGTGCAGATGGTA 58.575 37.500 0.00 0.00 0.00 3.25
87 88 5.523916 AGTTTAAATAGCGTGCAGATGGTAG 59.476 40.000 0.00 0.00 0.00 3.18
88 89 2.533266 AATAGCGTGCAGATGGTAGG 57.467 50.000 0.00 0.00 0.00 3.18
89 90 0.681733 ATAGCGTGCAGATGGTAGGG 59.318 55.000 0.00 0.00 0.00 3.53
90 91 2.028125 TAGCGTGCAGATGGTAGGGC 62.028 60.000 0.00 0.00 0.00 5.19
91 92 2.584064 CGTGCAGATGGTAGGGCA 59.416 61.111 0.00 0.00 0.00 5.36
92 93 1.146930 CGTGCAGATGGTAGGGCAT 59.853 57.895 0.00 0.00 38.68 4.40
93 94 1.162181 CGTGCAGATGGTAGGGCATG 61.162 60.000 0.00 0.00 38.68 4.06
94 95 1.152902 TGCAGATGGTAGGGCATGC 60.153 57.895 9.90 9.90 0.00 4.06
95 96 1.152902 GCAGATGGTAGGGCATGCA 60.153 57.895 21.36 0.00 33.92 3.96
96 97 0.752743 GCAGATGGTAGGGCATGCAA 60.753 55.000 21.36 0.63 33.92 4.08
97 98 1.027357 CAGATGGTAGGGCATGCAAC 58.973 55.000 21.36 13.81 0.00 4.17
98 99 0.464373 AGATGGTAGGGCATGCAACG 60.464 55.000 21.36 0.00 0.00 4.10
99 100 0.463654 GATGGTAGGGCATGCAACGA 60.464 55.000 21.36 11.75 0.00 3.85
100 101 0.464373 ATGGTAGGGCATGCAACGAG 60.464 55.000 21.36 0.00 0.00 4.18
101 102 1.819632 GGTAGGGCATGCAACGAGG 60.820 63.158 21.36 0.00 0.00 4.63
102 103 1.078426 GTAGGGCATGCAACGAGGT 60.078 57.895 21.36 0.00 0.00 3.85
103 104 1.078497 TAGGGCATGCAACGAGGTG 60.078 57.895 21.36 0.00 0.00 4.00
104 105 2.535485 TAGGGCATGCAACGAGGTGG 62.535 60.000 21.36 0.00 0.00 4.61
105 106 4.120331 GGCATGCAACGAGGTGGC 62.120 66.667 21.36 0.00 32.23 5.01
106 107 3.058160 GCATGCAACGAGGTGGCT 61.058 61.111 14.21 0.00 32.93 4.75
107 108 1.745115 GCATGCAACGAGGTGGCTA 60.745 57.895 14.21 0.00 32.93 3.93
108 109 1.305219 GCATGCAACGAGGTGGCTAA 61.305 55.000 14.21 0.00 32.93 3.09
109 110 0.447801 CATGCAACGAGGTGGCTAAC 59.552 55.000 0.00 0.00 32.93 2.34
110 111 1.019278 ATGCAACGAGGTGGCTAACG 61.019 55.000 0.00 0.00 32.93 3.18
111 112 2.388232 GCAACGAGGTGGCTAACGG 61.388 63.158 0.00 0.00 28.38 4.44
112 113 1.005394 CAACGAGGTGGCTAACGGT 60.005 57.895 0.00 0.00 0.00 4.83
113 114 1.005394 AACGAGGTGGCTAACGGTG 60.005 57.895 0.00 0.00 0.00 4.94
114 115 2.125673 CGAGGTGGCTAACGGTGG 60.126 66.667 0.00 0.00 0.00 4.61
115 116 2.267961 GAGGTGGCTAACGGTGGG 59.732 66.667 0.00 0.00 0.00 4.61
116 117 2.528378 AGGTGGCTAACGGTGGGT 60.528 61.111 0.00 0.00 0.00 4.51
117 118 1.229272 AGGTGGCTAACGGTGGGTA 60.229 57.895 0.00 0.00 0.00 3.69
118 119 0.837260 AGGTGGCTAACGGTGGGTAA 60.837 55.000 0.00 0.00 0.00 2.85
119 120 0.674581 GGTGGCTAACGGTGGGTAAC 60.675 60.000 0.00 0.00 0.00 2.50
120 121 0.035176 GTGGCTAACGGTGGGTAACA 59.965 55.000 0.00 0.00 39.74 2.41
121 122 0.322322 TGGCTAACGGTGGGTAACAG 59.678 55.000 0.00 0.00 39.74 3.16
122 123 0.609662 GGCTAACGGTGGGTAACAGA 59.390 55.000 0.00 0.00 39.74 3.41
123 124 1.673923 GGCTAACGGTGGGTAACAGAC 60.674 57.143 0.00 0.00 39.74 3.51
124 125 1.986698 CTAACGGTGGGTAACAGACG 58.013 55.000 0.00 0.00 36.88 4.18
125 126 0.602562 TAACGGTGGGTAACAGACGG 59.397 55.000 0.00 0.00 35.62 4.79
126 127 1.114722 AACGGTGGGTAACAGACGGA 61.115 55.000 0.00 0.00 35.62 4.69
127 128 0.901580 ACGGTGGGTAACAGACGGAT 60.902 55.000 0.00 0.00 35.62 4.18
128 129 0.459585 CGGTGGGTAACAGACGGATG 60.460 60.000 0.00 0.00 39.74 3.51
129 130 0.899720 GGTGGGTAACAGACGGATGA 59.100 55.000 0.00 0.00 39.74 2.92
130 131 1.276989 GGTGGGTAACAGACGGATGAA 59.723 52.381 0.00 0.00 39.74 2.57
131 132 2.344025 GTGGGTAACAGACGGATGAAC 58.656 52.381 0.00 0.00 39.74 3.18
132 133 1.972075 TGGGTAACAGACGGATGAACA 59.028 47.619 0.00 0.00 39.74 3.18
133 134 2.028476 TGGGTAACAGACGGATGAACAG 60.028 50.000 0.00 0.00 39.74 3.16
134 135 2.618053 GGTAACAGACGGATGAACAGG 58.382 52.381 0.00 0.00 0.00 4.00
135 136 2.028385 GGTAACAGACGGATGAACAGGT 60.028 50.000 0.00 0.00 0.00 4.00
136 137 2.169832 AACAGACGGATGAACAGGTG 57.830 50.000 0.00 0.00 0.00 4.00
137 138 1.338107 ACAGACGGATGAACAGGTGA 58.662 50.000 0.00 0.00 0.00 4.02
138 139 1.000955 ACAGACGGATGAACAGGTGAC 59.999 52.381 0.00 0.00 0.00 3.67
139 140 0.243907 AGACGGATGAACAGGTGACG 59.756 55.000 0.00 0.00 0.00 4.35
140 141 1.352156 GACGGATGAACAGGTGACGC 61.352 60.000 0.00 0.00 0.00 5.19
141 142 1.079819 CGGATGAACAGGTGACGCT 60.080 57.895 0.00 0.00 0.00 5.07
142 143 1.354337 CGGATGAACAGGTGACGCTG 61.354 60.000 0.48 0.48 0.00 5.18
143 144 1.021390 GGATGAACAGGTGACGCTGG 61.021 60.000 6.14 0.00 0.00 4.85
144 145 0.037326 GATGAACAGGTGACGCTGGA 60.037 55.000 6.14 0.00 0.00 3.86
145 146 0.036952 ATGAACAGGTGACGCTGGAG 60.037 55.000 6.14 0.00 0.00 3.86
146 147 2.029844 GAACAGGTGACGCTGGAGC 61.030 63.158 6.14 0.00 37.78 4.70
147 148 2.715532 GAACAGGTGACGCTGGAGCA 62.716 60.000 0.00 0.00 42.21 4.26
148 149 2.433838 CAGGTGACGCTGGAGCAG 60.434 66.667 0.00 0.00 42.21 4.24
149 150 3.699894 AGGTGACGCTGGAGCAGG 61.700 66.667 0.00 0.00 42.21 4.85
150 151 4.008933 GGTGACGCTGGAGCAGGT 62.009 66.667 0.00 0.00 42.21 4.00
151 152 2.031163 GTGACGCTGGAGCAGGTT 59.969 61.111 0.00 0.00 42.21 3.50
152 153 2.029844 GTGACGCTGGAGCAGGTTC 61.030 63.158 0.00 0.00 42.21 3.62
153 154 2.435059 GACGCTGGAGCAGGTTCC 60.435 66.667 0.00 0.00 42.21 3.62
154 155 2.925170 ACGCTGGAGCAGGTTCCT 60.925 61.111 3.80 0.00 42.21 3.36
155 156 2.125350 CGCTGGAGCAGGTTCCTC 60.125 66.667 3.80 0.00 42.21 3.71
156 157 2.125350 GCTGGAGCAGGTTCCTCG 60.125 66.667 3.80 0.00 41.59 4.63
157 158 2.581354 CTGGAGCAGGTTCCTCGG 59.419 66.667 3.80 0.00 38.12 4.63
158 159 3.672295 CTGGAGCAGGTTCCTCGGC 62.672 68.421 3.80 0.00 38.12 5.54
159 160 3.706373 GGAGCAGGTTCCTCGGCA 61.706 66.667 4.44 0.00 34.27 5.69
160 161 2.347490 GAGCAGGTTCCTCGGCAA 59.653 61.111 4.44 0.00 0.00 4.52
161 162 2.032681 AGCAGGTTCCTCGGCAAC 59.967 61.111 4.44 0.00 0.00 4.17
162 163 3.056328 GCAGGTTCCTCGGCAACC 61.056 66.667 8.40 8.40 43.38 3.77
163 164 2.742372 CAGGTTCCTCGGCAACCG 60.742 66.667 0.00 0.00 46.98 4.44
164 165 3.239253 AGGTTCCTCGGCAACCGT 61.239 61.111 5.85 0.00 46.98 4.83
165 166 3.530910 AGGTTCCTCGGCAACCGTG 62.531 63.158 5.85 3.42 46.98 4.94
180 181 4.411327 CAACCGTGCATGTTTAATGTAGG 58.589 43.478 4.96 0.00 0.00 3.18
181 182 3.013921 ACCGTGCATGTTTAATGTAGGG 58.986 45.455 4.96 11.86 42.59 3.53
182 183 3.275143 CCGTGCATGTTTAATGTAGGGA 58.725 45.455 4.96 0.00 40.48 4.20
183 184 3.312421 CCGTGCATGTTTAATGTAGGGAG 59.688 47.826 4.96 0.00 40.48 4.30
184 185 3.312421 CGTGCATGTTTAATGTAGGGAGG 59.688 47.826 0.00 0.00 0.00 4.30
185 186 3.066760 GTGCATGTTTAATGTAGGGAGGC 59.933 47.826 0.00 0.00 0.00 4.70
186 187 2.290641 GCATGTTTAATGTAGGGAGGCG 59.709 50.000 0.00 0.00 0.00 5.52
187 188 2.702592 TGTTTAATGTAGGGAGGCGG 57.297 50.000 0.00 0.00 0.00 6.13
188 189 2.189676 TGTTTAATGTAGGGAGGCGGA 58.810 47.619 0.00 0.00 0.00 5.54
189 190 2.093341 TGTTTAATGTAGGGAGGCGGAC 60.093 50.000 0.00 0.00 0.00 4.79
190 191 1.868713 TTAATGTAGGGAGGCGGACA 58.131 50.000 0.00 0.00 0.00 4.02
191 192 2.097110 TAATGTAGGGAGGCGGACAT 57.903 50.000 0.00 0.00 34.00 3.06
192 193 2.097110 AATGTAGGGAGGCGGACATA 57.903 50.000 0.00 0.00 32.31 2.29
193 194 1.339097 ATGTAGGGAGGCGGACATAC 58.661 55.000 0.00 0.00 30.83 2.39
194 195 0.260816 TGTAGGGAGGCGGACATACT 59.739 55.000 0.00 0.00 0.00 2.12
195 196 0.674534 GTAGGGAGGCGGACATACTG 59.325 60.000 0.00 0.00 0.00 2.74
196 197 0.469331 TAGGGAGGCGGACATACTGG 60.469 60.000 0.00 0.00 0.00 4.00
197 198 1.760875 GGGAGGCGGACATACTGGA 60.761 63.158 0.00 0.00 0.00 3.86
198 199 1.122019 GGGAGGCGGACATACTGGAT 61.122 60.000 0.00 0.00 0.00 3.41
199 200 0.034059 GGAGGCGGACATACTGGATG 59.966 60.000 0.00 0.00 41.79 3.51
210 211 5.801350 ACATACTGGATGTCATTTGAACG 57.199 39.130 0.00 0.00 46.33 3.95
211 212 4.094887 ACATACTGGATGTCATTTGAACGC 59.905 41.667 0.00 0.00 46.33 4.84
212 213 1.812571 ACTGGATGTCATTTGAACGCC 59.187 47.619 0.00 0.00 0.00 5.68
213 214 0.801872 TGGATGTCATTTGAACGCCG 59.198 50.000 0.00 0.00 0.00 6.46
214 215 1.083489 GGATGTCATTTGAACGCCGA 58.917 50.000 0.00 0.00 0.00 5.54
215 216 1.670811 GGATGTCATTTGAACGCCGAT 59.329 47.619 0.00 0.00 0.00 4.18
216 217 2.286418 GGATGTCATTTGAACGCCGATC 60.286 50.000 0.00 0.00 0.00 3.69
217 218 1.802069 TGTCATTTGAACGCCGATCA 58.198 45.000 0.00 0.00 0.00 2.92
218 219 1.731709 TGTCATTTGAACGCCGATCAG 59.268 47.619 0.00 0.00 0.00 2.90
219 220 1.732259 GTCATTTGAACGCCGATCAGT 59.268 47.619 0.00 0.00 0.00 3.41
220 221 1.999735 TCATTTGAACGCCGATCAGTC 59.000 47.619 0.00 0.00 0.00 3.51
222 223 1.623081 TTTGAACGCCGATCAGTCGC 61.623 55.000 0.00 0.00 46.32 5.19
223 224 3.607987 GAACGCCGATCAGTCGCG 61.608 66.667 0.00 0.00 46.32 5.87
228 229 3.545481 CCGATCAGTCGCGTGCAC 61.545 66.667 6.82 6.82 46.32 4.57
229 230 3.545481 CGATCAGTCGCGTGCACC 61.545 66.667 12.15 3.09 41.49 5.01
230 231 3.545481 GATCAGTCGCGTGCACCG 61.545 66.667 12.15 15.73 40.40 4.94
258 259 3.197790 CGGGCGGTGCTCTCAATG 61.198 66.667 0.00 0.00 0.00 2.82
259 260 3.512516 GGGCGGTGCTCTCAATGC 61.513 66.667 0.00 0.00 0.00 3.56
260 261 3.512516 GGCGGTGCTCTCAATGCC 61.513 66.667 0.00 0.00 37.52 4.40
261 262 3.869272 GCGGTGCTCTCAATGCCG 61.869 66.667 0.00 0.00 44.60 5.69
262 263 3.197790 CGGTGCTCTCAATGCCGG 61.198 66.667 0.00 0.00 38.86 6.13
263 264 2.268920 GGTGCTCTCAATGCCGGA 59.731 61.111 5.05 0.00 0.00 5.14
264 265 1.817099 GGTGCTCTCAATGCCGGAG 60.817 63.158 5.05 0.00 0.00 4.63
266 267 3.267860 GCTCTCAATGCCGGAGCG 61.268 66.667 5.05 0.00 44.31 5.03
267 268 2.496341 CTCTCAATGCCGGAGCGA 59.504 61.111 5.05 0.00 44.31 4.93
268 269 1.880340 CTCTCAATGCCGGAGCGAC 60.880 63.158 5.05 0.00 44.31 5.19
269 270 2.892425 CTCAATGCCGGAGCGACC 60.892 66.667 5.05 0.00 44.31 4.79
270 271 3.376935 CTCAATGCCGGAGCGACCT 62.377 63.158 5.05 0.00 44.31 3.85
271 272 3.197790 CAATGCCGGAGCGACCTG 61.198 66.667 5.05 0.00 44.31 4.00
272 273 3.390521 AATGCCGGAGCGACCTGA 61.391 61.111 5.05 0.00 44.31 3.86
273 274 2.954684 AATGCCGGAGCGACCTGAA 61.955 57.895 5.05 0.00 44.31 3.02
274 275 2.463589 AATGCCGGAGCGACCTGAAA 62.464 55.000 5.05 0.00 44.31 2.69
275 276 2.815647 GCCGGAGCGACCTGAAAG 60.816 66.667 5.05 0.00 36.31 2.62
289 290 3.369546 CTGAAAGGTTGCGTCCATTTT 57.630 42.857 0.03 0.00 0.00 1.82
290 291 3.052036 CTGAAAGGTTGCGTCCATTTTG 58.948 45.455 0.03 0.00 0.00 2.44
291 292 2.223923 TGAAAGGTTGCGTCCATTTTGG 60.224 45.455 0.03 0.00 39.43 3.28
292 293 0.678950 AAGGTTGCGTCCATTTTGGG 59.321 50.000 0.03 0.00 38.32 4.12
293 294 1.374125 GGTTGCGTCCATTTTGGGC 60.374 57.895 0.00 0.00 39.19 5.36
294 295 1.365633 GTTGCGTCCATTTTGGGCA 59.634 52.632 0.00 0.00 43.88 5.36
295 296 0.667184 GTTGCGTCCATTTTGGGCAG 60.667 55.000 0.00 0.00 43.88 4.85
296 297 1.814772 TTGCGTCCATTTTGGGCAGG 61.815 55.000 0.00 0.00 43.88 4.85
297 298 2.573340 CGTCCATTTTGGGCAGGC 59.427 61.111 0.00 0.00 43.88 4.85
298 299 2.274645 CGTCCATTTTGGGCAGGCA 61.275 57.895 0.00 0.00 43.88 4.75
299 300 1.606885 CGTCCATTTTGGGCAGGCAT 61.607 55.000 0.00 0.00 43.88 4.40
300 301 0.108041 GTCCATTTTGGGCAGGCATG 60.108 55.000 0.00 0.00 42.98 4.06
301 302 0.252148 TCCATTTTGGGCAGGCATGA 60.252 50.000 0.62 0.00 38.32 3.07
302 303 0.614294 CCATTTTGGGCAGGCATGAA 59.386 50.000 0.62 0.00 32.67 2.57
303 304 1.210967 CCATTTTGGGCAGGCATGAAT 59.789 47.619 0.62 0.00 32.67 2.57
304 305 2.285083 CATTTTGGGCAGGCATGAATG 58.715 47.619 0.62 0.00 0.00 2.67
313 314 3.507924 GCATGAATGCGGCGGTGA 61.508 61.111 9.78 0.00 44.67 4.02
314 315 2.404789 CATGAATGCGGCGGTGAC 59.595 61.111 9.78 0.00 0.00 3.67
333 334 4.803426 CTCTGGAGCGGCGGTGAC 62.803 72.222 19.47 10.12 0.00 3.67
344 345 3.411351 CGGTGACCGCTTTGGACG 61.411 66.667 12.53 0.00 41.17 4.79
351 352 4.058797 CGCTTTGGACGGGAAACT 57.941 55.556 0.00 0.00 0.00 2.66
352 353 1.574428 CGCTTTGGACGGGAAACTG 59.426 57.895 0.00 0.00 44.60 3.16
353 354 1.285950 GCTTTGGACGGGAAACTGC 59.714 57.895 0.00 0.00 41.93 4.40
354 355 1.172812 GCTTTGGACGGGAAACTGCT 61.173 55.000 0.00 0.00 41.93 4.24
355 356 0.875059 CTTTGGACGGGAAACTGCTC 59.125 55.000 0.00 0.00 41.93 4.26
356 357 0.882927 TTTGGACGGGAAACTGCTCG 60.883 55.000 0.00 0.00 41.93 5.03
357 358 1.750341 TTGGACGGGAAACTGCTCGA 61.750 55.000 0.00 0.00 41.93 4.04
358 359 1.446272 GGACGGGAAACTGCTCGAG 60.446 63.158 8.45 8.45 41.93 4.04
359 360 2.048127 ACGGGAAACTGCTCGAGC 60.048 61.111 30.42 30.42 41.93 5.03
360 361 3.181967 CGGGAAACTGCTCGAGCG 61.182 66.667 30.75 25.84 45.83 5.03
368 369 3.452786 TGCTCGAGCGGAAGAGGG 61.453 66.667 30.75 0.00 45.83 4.30
369 370 3.453679 GCTCGAGCGGAAGAGGGT 61.454 66.667 23.61 0.00 35.19 4.34
370 371 3.007973 GCTCGAGCGGAAGAGGGTT 62.008 63.158 23.61 0.00 35.19 4.11
371 372 1.592223 CTCGAGCGGAAGAGGGTTT 59.408 57.895 0.00 0.00 0.00 3.27
372 373 0.737715 CTCGAGCGGAAGAGGGTTTG 60.738 60.000 0.00 0.00 0.00 2.93
373 374 1.004918 CGAGCGGAAGAGGGTTTGT 60.005 57.895 0.00 0.00 0.00 2.83
374 375 1.291877 CGAGCGGAAGAGGGTTTGTG 61.292 60.000 0.00 0.00 0.00 3.33
375 376 0.250338 GAGCGGAAGAGGGTTTGTGT 60.250 55.000 0.00 0.00 0.00 3.72
376 377 0.535102 AGCGGAAGAGGGTTTGTGTG 60.535 55.000 0.00 0.00 0.00 3.82
377 378 1.515521 GCGGAAGAGGGTTTGTGTGG 61.516 60.000 0.00 0.00 0.00 4.17
378 379 0.889186 CGGAAGAGGGTTTGTGTGGG 60.889 60.000 0.00 0.00 0.00 4.61
379 380 1.179174 GGAAGAGGGTTTGTGTGGGC 61.179 60.000 0.00 0.00 0.00 5.36
380 381 1.152546 AAGAGGGTTTGTGTGGGCC 60.153 57.895 0.00 0.00 0.00 5.80
381 382 1.943730 AAGAGGGTTTGTGTGGGCCA 61.944 55.000 0.00 0.00 0.00 5.36
382 383 1.903404 GAGGGTTTGTGTGGGCCAG 60.903 63.158 6.40 0.00 0.00 4.85
383 384 2.917227 GGGTTTGTGTGGGCCAGG 60.917 66.667 6.40 0.00 0.00 4.45
384 385 2.917227 GGTTTGTGTGGGCCAGGG 60.917 66.667 6.40 0.00 0.00 4.45
385 386 2.197324 GTTTGTGTGGGCCAGGGA 59.803 61.111 6.40 0.00 0.00 4.20
386 387 2.197324 TTTGTGTGGGCCAGGGAC 59.803 61.111 6.40 4.71 0.00 4.46
387 388 2.694920 TTTGTGTGGGCCAGGGACA 61.695 57.895 6.40 7.77 0.00 4.02
388 389 2.017668 TTTGTGTGGGCCAGGGACAT 62.018 55.000 6.40 0.00 0.00 3.06
389 390 2.017668 TTGTGTGGGCCAGGGACATT 62.018 55.000 6.40 0.00 0.00 2.71
390 391 1.978617 GTGTGGGCCAGGGACATTG 60.979 63.158 6.40 0.00 0.00 2.82
391 392 2.362889 GTGGGCCAGGGACATTGG 60.363 66.667 6.40 0.00 38.78 3.16
392 393 2.534011 TGGGCCAGGGACATTGGA 60.534 61.111 0.00 0.00 37.96 3.53
393 394 1.935400 TGGGCCAGGGACATTGGAT 60.935 57.895 0.00 0.00 37.96 3.41
394 395 1.456331 GGGCCAGGGACATTGGATG 60.456 63.158 4.39 0.00 37.96 3.51
396 397 0.324645 GGCCAGGGACATTGGATGTT 60.325 55.000 0.00 0.00 45.03 2.71
397 398 1.560505 GCCAGGGACATTGGATGTTT 58.439 50.000 0.00 0.00 45.03 2.83
398 399 1.205417 GCCAGGGACATTGGATGTTTG 59.795 52.381 0.00 0.00 45.03 2.93
399 400 1.205417 CCAGGGACATTGGATGTTTGC 59.795 52.381 0.00 0.00 45.03 3.68
400 401 1.135315 CAGGGACATTGGATGTTTGCG 60.135 52.381 0.00 0.00 45.03 4.85
401 402 0.887933 GGGACATTGGATGTTTGCGT 59.112 50.000 0.00 0.00 45.03 5.24
402 403 1.402720 GGGACATTGGATGTTTGCGTG 60.403 52.381 0.00 0.00 45.03 5.34
403 404 1.402720 GGACATTGGATGTTTGCGTGG 60.403 52.381 0.00 0.00 45.03 4.94
404 405 0.038343 ACATTGGATGTTTGCGTGGC 60.038 50.000 0.00 0.00 41.63 5.01
405 406 0.038435 CATTGGATGTTTGCGTGGCA 60.038 50.000 0.00 0.00 36.47 4.92
406 407 0.244450 ATTGGATGTTTGCGTGGCAG 59.756 50.000 0.00 0.00 40.61 4.85
407 408 2.126346 GGATGTTTGCGTGGCAGC 60.126 61.111 0.00 0.00 40.61 5.25
408 409 2.644418 GATGTTTGCGTGGCAGCA 59.356 55.556 7.40 7.40 46.54 4.41
414 415 2.596923 TGCGTGGCAGCAATCCAA 60.597 55.556 8.79 0.00 45.06 3.53
415 416 2.198969 TGCGTGGCAGCAATCCAAA 61.199 52.632 8.79 0.00 45.06 3.28
416 417 1.734117 GCGTGGCAGCAATCCAAAC 60.734 57.895 0.00 0.00 35.01 2.93
417 418 1.959085 CGTGGCAGCAATCCAAACT 59.041 52.632 0.00 0.00 35.01 2.66
418 419 0.109597 CGTGGCAGCAATCCAAACTC 60.110 55.000 0.00 0.00 35.01 3.01
419 420 0.244721 GTGGCAGCAATCCAAACTCC 59.755 55.000 0.00 0.00 35.01 3.85
420 421 0.899717 TGGCAGCAATCCAAACTCCC 60.900 55.000 0.00 0.00 0.00 4.30
421 422 1.508088 GCAGCAATCCAAACTCCCG 59.492 57.895 0.00 0.00 0.00 5.14
422 423 1.508088 CAGCAATCCAAACTCCCGC 59.492 57.895 0.00 0.00 0.00 6.13
423 424 2.040544 AGCAATCCAAACTCCCGCG 61.041 57.895 0.00 0.00 0.00 6.46
424 425 2.038269 GCAATCCAAACTCCCGCGA 61.038 57.895 8.23 0.00 0.00 5.87
425 426 1.582610 GCAATCCAAACTCCCGCGAA 61.583 55.000 8.23 0.00 0.00 4.70
426 427 0.447801 CAATCCAAACTCCCGCGAAG 59.552 55.000 8.23 7.39 0.00 3.79
441 442 2.474410 CGAAGCCCCTCAGTTTACTT 57.526 50.000 0.00 0.00 0.00 2.24
442 443 2.347731 CGAAGCCCCTCAGTTTACTTC 58.652 52.381 0.00 0.00 0.00 3.01
443 444 2.712709 GAAGCCCCTCAGTTTACTTCC 58.287 52.381 0.00 0.00 0.00 3.46
444 445 0.613777 AGCCCCTCAGTTTACTTCCG 59.386 55.000 0.00 0.00 0.00 4.30
445 446 0.392595 GCCCCTCAGTTTACTTCCGG 60.393 60.000 0.00 0.00 0.00 5.14
446 447 0.981943 CCCCTCAGTTTACTTCCGGT 59.018 55.000 0.00 0.00 0.00 5.28
447 448 1.350019 CCCCTCAGTTTACTTCCGGTT 59.650 52.381 0.00 0.00 0.00 4.44
448 449 2.568509 CCCCTCAGTTTACTTCCGGTTA 59.431 50.000 0.00 0.00 0.00 2.85
449 450 3.008266 CCCCTCAGTTTACTTCCGGTTAA 59.992 47.826 0.00 0.00 0.00 2.01
450 451 4.324022 CCCCTCAGTTTACTTCCGGTTAAT 60.324 45.833 0.00 0.00 0.00 1.40
451 452 4.874396 CCCTCAGTTTACTTCCGGTTAATC 59.126 45.833 0.00 0.00 0.00 1.75
452 453 5.338137 CCCTCAGTTTACTTCCGGTTAATCT 60.338 44.000 0.00 0.10 0.00 2.40
453 454 5.811100 CCTCAGTTTACTTCCGGTTAATCTC 59.189 44.000 0.00 0.00 0.00 2.75
454 455 6.351117 CCTCAGTTTACTTCCGGTTAATCTCT 60.351 42.308 0.00 0.00 0.00 3.10
455 456 6.395629 TCAGTTTACTTCCGGTTAATCTCTG 58.604 40.000 0.00 5.04 0.00 3.35
456 457 6.014840 TCAGTTTACTTCCGGTTAATCTCTGT 60.015 38.462 0.00 0.00 0.00 3.41
457 458 6.310711 CAGTTTACTTCCGGTTAATCTCTGTC 59.689 42.308 0.00 0.00 0.00 3.51
458 459 6.210984 AGTTTACTTCCGGTTAATCTCTGTCT 59.789 38.462 0.00 0.00 0.00 3.41
459 460 4.722361 ACTTCCGGTTAATCTCTGTCTC 57.278 45.455 0.00 0.00 0.00 3.36
460 461 4.345854 ACTTCCGGTTAATCTCTGTCTCT 58.654 43.478 0.00 0.00 0.00 3.10
461 462 5.507637 ACTTCCGGTTAATCTCTGTCTCTA 58.492 41.667 0.00 0.00 0.00 2.43
462 463 5.357596 ACTTCCGGTTAATCTCTGTCTCTAC 59.642 44.000 0.00 0.00 0.00 2.59
463 464 5.113446 TCCGGTTAATCTCTGTCTCTACT 57.887 43.478 0.00 0.00 0.00 2.57
464 465 4.882427 TCCGGTTAATCTCTGTCTCTACTG 59.118 45.833 0.00 0.00 0.00 2.74
465 466 4.498345 CCGGTTAATCTCTGTCTCTACTGC 60.498 50.000 0.00 0.00 0.00 4.40
466 467 4.336993 CGGTTAATCTCTGTCTCTACTGCT 59.663 45.833 0.00 0.00 0.00 4.24
467 468 5.163602 CGGTTAATCTCTGTCTCTACTGCTT 60.164 44.000 0.00 0.00 0.00 3.91
468 469 6.038382 CGGTTAATCTCTGTCTCTACTGCTTA 59.962 42.308 0.00 0.00 0.00 3.09
469 470 7.415318 CGGTTAATCTCTGTCTCTACTGCTTAA 60.415 40.741 0.00 0.00 0.00 1.85
470 471 8.417884 GGTTAATCTCTGTCTCTACTGCTTAAT 58.582 37.037 0.00 0.00 0.00 1.40
475 476 8.753497 TCTCTGTCTCTACTGCTTAATAATCA 57.247 34.615 0.00 0.00 0.00 2.57
476 477 9.190317 TCTCTGTCTCTACTGCTTAATAATCAA 57.810 33.333 0.00 0.00 0.00 2.57
477 478 9.979578 CTCTGTCTCTACTGCTTAATAATCAAT 57.020 33.333 0.00 0.00 0.00 2.57
478 479 9.973450 TCTGTCTCTACTGCTTAATAATCAATC 57.027 33.333 0.00 0.00 0.00 2.67
479 480 9.755804 CTGTCTCTACTGCTTAATAATCAATCA 57.244 33.333 0.00 0.00 0.00 2.57
480 481 9.534565 TGTCTCTACTGCTTAATAATCAATCAC 57.465 33.333 0.00 0.00 0.00 3.06
481 482 8.983724 GTCTCTACTGCTTAATAATCAATCACC 58.016 37.037 0.00 0.00 0.00 4.02
482 483 8.928448 TCTCTACTGCTTAATAATCAATCACCT 58.072 33.333 0.00 0.00 0.00 4.00
483 484 9.553064 CTCTACTGCTTAATAATCAATCACCTT 57.447 33.333 0.00 0.00 0.00 3.50
513 514 7.582667 ACTTACCTTCTAAAACAATTGCACT 57.417 32.000 5.05 0.00 0.00 4.40
514 515 8.007405 ACTTACCTTCTAAAACAATTGCACTT 57.993 30.769 5.05 0.00 0.00 3.16
515 516 8.474831 ACTTACCTTCTAAAACAATTGCACTTT 58.525 29.630 5.05 5.75 0.00 2.66
516 517 9.959749 CTTACCTTCTAAAACAATTGCACTTTA 57.040 29.630 5.05 6.58 0.00 1.85
519 520 9.830975 ACCTTCTAAAACAATTGCACTTTAATT 57.169 25.926 5.05 0.00 0.00 1.40
656 657 8.970691 AAAATATTTATATCCTGTTGCGATGC 57.029 30.769 0.01 0.00 0.00 3.91
657 658 7.686438 AATATTTATATCCTGTTGCGATGCA 57.314 32.000 0.00 0.00 36.47 3.96
658 659 4.811555 TTTATATCCTGTTGCGATGCAC 57.188 40.909 0.00 0.00 38.71 4.57
659 660 1.220529 ATATCCTGTTGCGATGCACG 58.779 50.000 0.00 0.00 38.71 5.34
660 661 0.809636 TATCCTGTTGCGATGCACGG 60.810 55.000 10.02 0.00 38.71 4.94
661 662 2.520465 ATCCTGTTGCGATGCACGGA 62.520 55.000 10.02 5.05 38.71 4.69
662 663 2.476051 CTGTTGCGATGCACGGAC 59.524 61.111 10.02 4.25 42.85 4.79
663 664 2.280457 TGTTGCGATGCACGGACA 60.280 55.556 10.02 6.24 42.85 4.02
664 665 1.638388 CTGTTGCGATGCACGGACAT 61.638 55.000 10.02 0.00 42.85 3.06
665 666 1.233950 TGTTGCGATGCACGGACATT 61.234 50.000 10.02 0.00 42.85 2.71
666 667 0.724549 GTTGCGATGCACGGACATTA 59.275 50.000 10.02 0.00 42.85 1.90
667 668 1.330521 GTTGCGATGCACGGACATTAT 59.669 47.619 10.02 0.00 42.85 1.28
668 669 1.662517 TGCGATGCACGGACATTATT 58.337 45.000 10.02 0.00 42.83 1.40
669 670 2.013400 TGCGATGCACGGACATTATTT 58.987 42.857 10.02 0.00 42.83 1.40
670 671 2.421775 TGCGATGCACGGACATTATTTT 59.578 40.909 10.02 0.00 42.83 1.82
671 672 3.623510 TGCGATGCACGGACATTATTTTA 59.376 39.130 10.02 0.00 42.83 1.52
672 673 4.211389 GCGATGCACGGACATTATTTTAG 58.789 43.478 10.02 0.00 42.83 1.85
673 674 4.260620 GCGATGCACGGACATTATTTTAGT 60.261 41.667 10.02 0.00 42.83 2.24
674 675 5.050634 GCGATGCACGGACATTATTTTAGTA 60.051 40.000 10.02 0.00 42.83 1.82
675 676 6.352526 CGATGCACGGACATTATTTTAGTAC 58.647 40.000 0.00 0.00 38.46 2.73
676 677 5.705813 TGCACGGACATTATTTTAGTACG 57.294 39.130 0.00 0.00 44.77 3.67
677 678 5.409211 TGCACGGACATTATTTTAGTACGA 58.591 37.500 3.19 0.00 41.97 3.43
678 679 5.517411 TGCACGGACATTATTTTAGTACGAG 59.483 40.000 3.19 0.00 41.97 4.18
679 680 5.745294 GCACGGACATTATTTTAGTACGAGA 59.255 40.000 3.19 0.00 41.97 4.04
680 681 6.254157 GCACGGACATTATTTTAGTACGAGAA 59.746 38.462 3.19 0.00 41.97 2.87
681 682 7.201461 GCACGGACATTATTTTAGTACGAGAAA 60.201 37.037 3.19 0.00 41.97 2.52
682 683 8.649841 CACGGACATTATTTTAGTACGAGAAAA 58.350 33.333 3.19 6.03 41.97 2.29
683 684 9.206870 ACGGACATTATTTTAGTACGAGAAAAA 57.793 29.630 3.19 4.84 41.97 1.94
692 693 9.755064 ATTTTAGTACGAGAAAAATGACATTCG 57.245 29.630 0.05 3.08 32.93 3.34
693 694 8.523523 TTTAGTACGAGAAAAATGACATTCGA 57.476 30.769 12.20 0.00 32.81 3.71
694 695 8.523523 TTAGTACGAGAAAAATGACATTCGAA 57.476 30.769 12.20 0.00 32.81 3.71
695 696 6.818416 AGTACGAGAAAAATGACATTCGAAC 58.182 36.000 12.20 0.00 32.81 3.95
696 697 5.030874 ACGAGAAAAATGACATTCGAACC 57.969 39.130 12.20 0.00 32.81 3.62
697 698 4.513692 ACGAGAAAAATGACATTCGAACCA 59.486 37.500 12.20 0.00 32.81 3.67
698 699 5.181245 ACGAGAAAAATGACATTCGAACCAT 59.819 36.000 12.20 1.67 32.81 3.55
699 700 5.734498 CGAGAAAAATGACATTCGAACCATC 59.266 40.000 0.00 0.00 0.00 3.51
716 717 7.206981 GAACCATCGAATGAATCCATATTGT 57.793 36.000 0.00 0.00 31.59 2.71
717 718 6.564709 ACCATCGAATGAATCCATATTGTG 57.435 37.500 0.00 0.00 31.59 3.33
727 728 2.715749 CCATATTGTGGGCAGTCTGA 57.284 50.000 3.32 0.00 44.79 3.27
728 729 2.569059 CCATATTGTGGGCAGTCTGAG 58.431 52.381 3.32 0.00 44.79 3.35
729 730 2.569059 CATATTGTGGGCAGTCTGAGG 58.431 52.381 3.32 0.00 0.00 3.86
730 731 0.911769 TATTGTGGGCAGTCTGAGGG 59.088 55.000 3.32 0.00 0.00 4.30
731 732 1.136329 ATTGTGGGCAGTCTGAGGGT 61.136 55.000 3.32 0.00 0.00 4.34
732 733 1.768684 TTGTGGGCAGTCTGAGGGTC 61.769 60.000 3.32 0.00 0.00 4.46
733 734 2.607750 TGGGCAGTCTGAGGGTCC 60.608 66.667 3.32 0.00 0.00 4.46
734 735 2.607750 GGGCAGTCTGAGGGTCCA 60.608 66.667 3.32 0.00 0.00 4.02
735 736 2.224159 GGGCAGTCTGAGGGTCCAA 61.224 63.158 3.32 0.00 0.00 3.53
736 737 1.003233 GGCAGTCTGAGGGTCCAAC 60.003 63.158 3.32 0.00 0.00 3.77
737 738 1.374758 GCAGTCTGAGGGTCCAACG 60.375 63.158 3.32 0.00 0.00 4.10
738 739 1.293498 CAGTCTGAGGGTCCAACGG 59.707 63.158 0.00 0.00 0.00 4.44
739 740 1.155390 AGTCTGAGGGTCCAACGGA 59.845 57.895 0.00 0.00 0.00 4.69
740 741 0.900647 AGTCTGAGGGTCCAACGGAG 60.901 60.000 0.00 0.00 29.39 4.63
741 742 0.898789 GTCTGAGGGTCCAACGGAGA 60.899 60.000 0.00 0.00 29.39 3.71
742 743 0.041238 TCTGAGGGTCCAACGGAGAT 59.959 55.000 0.00 0.00 29.39 2.75
743 744 0.176680 CTGAGGGTCCAACGGAGATG 59.823 60.000 0.00 0.00 29.39 2.90
744 745 1.153349 GAGGGTCCAACGGAGATGC 60.153 63.158 0.00 0.00 29.39 3.91
745 746 2.124695 GGGTCCAACGGAGATGCC 60.125 66.667 0.00 0.00 29.39 4.40
746 747 2.668632 GGTCCAACGGAGATGCCA 59.331 61.111 0.00 0.00 35.94 4.92
747 748 1.002624 GGTCCAACGGAGATGCCAA 60.003 57.895 0.00 0.00 35.94 4.52
748 749 0.608035 GGTCCAACGGAGATGCCAAA 60.608 55.000 0.00 0.00 35.94 3.28
749 750 0.521735 GTCCAACGGAGATGCCAAAC 59.478 55.000 0.00 0.00 35.94 2.93
750 751 0.109532 TCCAACGGAGATGCCAAACA 59.890 50.000 0.00 0.00 35.94 2.83
751 752 0.958091 CCAACGGAGATGCCAAACAA 59.042 50.000 0.00 0.00 35.94 2.83
752 753 1.335872 CCAACGGAGATGCCAAACAAC 60.336 52.381 0.00 0.00 35.94 3.32
753 754 0.958822 AACGGAGATGCCAAACAACC 59.041 50.000 0.00 0.00 35.94 3.77
754 755 0.893727 ACGGAGATGCCAAACAACCC 60.894 55.000 0.00 0.00 35.94 4.11
755 756 0.893270 CGGAGATGCCAAACAACCCA 60.893 55.000 0.00 0.00 35.94 4.51
756 757 1.337118 GGAGATGCCAAACAACCCAA 58.663 50.000 0.00 0.00 36.34 4.12
757 758 1.691434 GGAGATGCCAAACAACCCAAA 59.309 47.619 0.00 0.00 36.34 3.28
758 759 2.103941 GGAGATGCCAAACAACCCAAAA 59.896 45.455 0.00 0.00 36.34 2.44
759 760 3.432890 GGAGATGCCAAACAACCCAAAAA 60.433 43.478 0.00 0.00 36.34 1.94
805 806 4.258702 AGAGTGTAAATCTTCACACGCT 57.741 40.909 5.45 5.45 38.70 5.07
832 833 3.121030 CGTGAGCTTTGGCCCGAG 61.121 66.667 0.00 0.00 39.73 4.63
873 877 2.814336 CTCCCTCCGTTTCCAAAGAAAG 59.186 50.000 0.00 0.00 42.60 2.62
949 955 1.685765 CGTCATCCCACCCCTCTCA 60.686 63.158 0.00 0.00 0.00 3.27
963 969 0.106217 CTCTCACTCCTCCTCCTCCC 60.106 65.000 0.00 0.00 0.00 4.30
964 970 1.075600 CTCACTCCTCCTCCTCCCC 60.076 68.421 0.00 0.00 0.00 4.81
965 971 2.041405 CACTCCTCCTCCTCCCCC 60.041 72.222 0.00 0.00 0.00 5.40
966 972 2.204705 ACTCCTCCTCCTCCCCCT 60.205 66.667 0.00 0.00 0.00 4.79
967 973 2.329399 ACTCCTCCTCCTCCCCCTC 61.329 68.421 0.00 0.00 0.00 4.30
968 974 3.036959 TCCTCCTCCTCCCCCTCC 61.037 72.222 0.00 0.00 0.00 4.30
969 975 4.179599 CCTCCTCCTCCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
970 976 3.368501 CTCCTCCTCCCCCTCCCA 61.369 72.222 0.00 0.00 0.00 4.37
971 977 3.695825 TCCTCCTCCCCCTCCCAC 61.696 72.222 0.00 0.00 0.00 4.61
972 978 3.700350 CCTCCTCCCCCTCCCACT 61.700 72.222 0.00 0.00 0.00 4.00
973 979 2.041405 CTCCTCCCCCTCCCACTC 60.041 72.222 0.00 0.00 0.00 3.51
974 980 3.695825 TCCTCCCCCTCCCACTCC 61.696 72.222 0.00 0.00 0.00 3.85
1032 1041 2.958355 CTCCATCTCCTCTCTGTTCCTC 59.042 54.545 0.00 0.00 0.00 3.71
1100 1142 0.103208 CCCAGAATCCGTTCCTCGAG 59.897 60.000 5.13 5.13 42.86 4.04
1223 1265 3.961414 GGTGGTTCGCCCTCCCAA 61.961 66.667 1.75 0.00 40.45 4.12
1247 1289 2.077821 GAGGCCCTCGATTCTCGTCC 62.078 65.000 0.00 0.00 41.35 4.79
1248 1290 2.026301 GCCCTCGATTCTCGTCCG 59.974 66.667 0.00 0.00 41.35 4.79
1283 1325 1.460699 GCCCTCCTTTGGTTGGTCT 59.539 57.895 0.00 0.00 0.00 3.85
1437 1479 2.852714 AGGATTTGGATTGGGATGCA 57.147 45.000 0.00 0.00 0.00 3.96
1670 1712 2.807967 CGAAGAACAGCTCATTGGTTCA 59.192 45.455 14.26 0.00 42.50 3.18
1865 1907 7.282450 ACCTTTTTCTAGAAAGTCGTTTCATGT 59.718 33.333 17.05 3.34 44.08 3.21
1913 1955 0.402504 TTGGACAAGGGTAACGGCAT 59.597 50.000 0.00 0.00 37.60 4.40
1928 1970 4.150897 ACGGCATGGTAATCAGTAATGT 57.849 40.909 0.00 0.00 0.00 2.71
1976 2018 2.445682 AGACCGCAGTTAGAGAGGAT 57.554 50.000 0.00 0.00 0.00 3.24
2260 2308 2.820059 TGCATCAGAGTTCGACAGTT 57.180 45.000 0.00 0.00 0.00 3.16
2441 2489 2.223433 GCACAGCTGATGCAAAGGATAC 60.223 50.000 26.21 3.83 42.88 2.24
2649 2697 8.208718 TGATTTGTATAAATGGTAGTGCTCAC 57.791 34.615 1.75 0.00 36.66 3.51
2850 2898 1.000060 TGTGAAGGCTTTGCTCATTGC 60.000 47.619 0.00 0.00 43.25 3.56
2942 2990 2.093553 AGAGAATCAGTGAAGAGCCTGC 60.094 50.000 0.00 0.00 37.82 4.85
3010 3058 1.479323 CCAACCATGATGGCAAAGAGG 59.521 52.381 12.25 0.83 42.67 3.69
3547 3596 7.888250 AGAGAAGAAATTCCAGAAACAACTT 57.112 32.000 0.00 0.00 0.00 2.66
3554 3603 3.874383 TCCAGAAACAACTTCCATGGA 57.126 42.857 11.44 11.44 36.50 3.41
3604 3653 6.321181 AGCTGAAAACATGAAACCTCTTGTTA 59.679 34.615 0.00 0.00 44.76 2.41
3942 4142 7.730364 AACTTGTGAGTAATACAGGAACTTG 57.270 36.000 0.00 0.00 31.76 3.16
3954 4154 3.134804 ACAGGAACTTGTGCAGTAACTCT 59.865 43.478 0.00 0.00 34.60 3.24
3958 4158 2.743938 ACTTGTGCAGTAACTCTCACG 58.256 47.619 0.00 0.00 31.97 4.35
4035 4235 7.173218 TGGCTTTCAGTAACTATTCTTGAACAG 59.827 37.037 0.00 0.00 0.00 3.16
4138 4339 4.458989 GTCCTCCAATGAGTAAAATGCACA 59.541 41.667 0.00 0.00 36.86 4.57
4382 4584 1.926511 ATGCTTGCAGCTTGCCGTAC 61.927 55.000 0.87 0.00 44.23 3.67
4683 4934 6.882768 AGAGGTAGATGTTTTCCTCAGAAT 57.117 37.500 11.73 0.00 46.09 2.40
4765 5016 1.953559 TGTCTGAAACTGTCCACTGC 58.046 50.000 0.00 0.00 0.00 4.40
4766 5017 1.209261 TGTCTGAAACTGTCCACTGCA 59.791 47.619 0.00 0.00 0.00 4.41
4815 5066 2.629051 AGCGTACCAAGCCAAGTAATC 58.371 47.619 0.00 0.00 34.64 1.75
4898 5159 3.878160 AATGTCCTCTTCGTCTCCTTC 57.122 47.619 0.00 0.00 0.00 3.46
4936 5197 2.843701 CAGTTTCTGGAGAGTTGCACT 58.156 47.619 0.00 0.00 0.00 4.40
5043 5310 4.032672 CGTCAATCTGAAGTTCATCTCTGC 59.967 45.833 5.91 0.00 0.00 4.26
5109 5377 5.515106 AGCTTGGTAAAATATAGGCCAACA 58.485 37.500 5.01 0.00 35.61 3.33
5218 5487 7.965107 GTCAAAAATAGCAAAGTCTCATAGGTG 59.035 37.037 0.00 0.00 0.00 4.00
5410 5682 1.513858 ATATGTTACTTCCCCCGCCA 58.486 50.000 0.00 0.00 0.00 5.69
5454 5726 5.438761 ACTTCACAATTACAACCTTGCTC 57.561 39.130 0.00 0.00 0.00 4.26
5513 5785 6.479990 AGCAATTGCAAAAGAAGTAAGTTTCC 59.520 34.615 30.89 0.00 45.16 3.13
5535 5807 5.533154 TCCGTGAACATTTTTGTACAATCCT 59.467 36.000 9.56 0.00 0.00 3.24
5536 5808 6.039941 TCCGTGAACATTTTTGTACAATCCTT 59.960 34.615 9.56 0.00 0.00 3.36
5537 5809 6.143758 CCGTGAACATTTTTGTACAATCCTTG 59.856 38.462 9.56 7.78 0.00 3.61
5539 5811 7.305935 CGTGAACATTTTTGTACAATCCTTGTG 60.306 37.037 9.56 5.88 45.03 3.33
5540 5812 6.478344 TGAACATTTTTGTACAATCCTTGTGC 59.522 34.615 9.56 10.08 45.03 4.57
5546 5818 3.734776 GTACAATCCTTGTGCGGTTAC 57.265 47.619 2.85 0.00 45.03 2.50
5547 5819 2.264005 ACAATCCTTGTGCGGTTACA 57.736 45.000 0.00 0.00 43.48 2.41
5548 5820 2.151202 ACAATCCTTGTGCGGTTACAG 58.849 47.619 0.00 0.00 43.48 2.74
5549 5821 2.224426 ACAATCCTTGTGCGGTTACAGA 60.224 45.455 0.00 0.00 43.48 3.41
5550 5822 3.009723 CAATCCTTGTGCGGTTACAGAT 58.990 45.455 0.00 0.00 0.00 2.90
5551 5823 4.188462 CAATCCTTGTGCGGTTACAGATA 58.812 43.478 0.00 0.00 0.00 1.98
5552 5824 3.241067 TCCTTGTGCGGTTACAGATAC 57.759 47.619 0.00 0.00 0.00 2.24
5553 5825 2.829720 TCCTTGTGCGGTTACAGATACT 59.170 45.455 0.00 0.00 0.00 2.12
5554 5826 2.930040 CCTTGTGCGGTTACAGATACTG 59.070 50.000 0.00 0.00 37.52 2.74
5556 5828 3.671008 TGTGCGGTTACAGATACTGTT 57.329 42.857 9.63 0.00 42.59 3.16
5557 5829 4.787260 TGTGCGGTTACAGATACTGTTA 57.213 40.909 9.63 0.00 42.59 2.41
5558 5830 5.136816 TGTGCGGTTACAGATACTGTTAA 57.863 39.130 9.63 1.02 42.59 2.01
5559 5831 4.925054 TGTGCGGTTACAGATACTGTTAAC 59.075 41.667 9.63 0.00 42.59 2.01
5560 5832 4.925054 GTGCGGTTACAGATACTGTTAACA 59.075 41.667 8.28 8.28 42.59 2.41
5561 5833 4.925054 TGCGGTTACAGATACTGTTAACAC 59.075 41.667 3.59 0.00 42.59 3.32
5617 5889 0.839946 ATCCAAGGGAAGATGGGACG 59.160 55.000 0.00 0.00 37.31 4.79
5638 6052 5.776744 ACGTAAACTTAGTCCTGTTAGTGG 58.223 41.667 0.00 0.00 0.00 4.00
5643 6057 6.681729 AACTTAGTCCTGTTAGTGGATCAA 57.318 37.500 0.00 0.00 35.87 2.57
5647 6061 5.153950 AGTCCTGTTAGTGGATCAAACTC 57.846 43.478 3.73 0.00 35.87 3.01
5795 6211 4.990543 TGTTAGACTTTTCTCATGCACG 57.009 40.909 0.00 0.00 32.75 5.34
5848 6264 7.147976 CACATATGAGTAAGTGGATCGATTCA 58.852 38.462 10.38 1.00 0.00 2.57
5853 6269 4.832248 AGTAAGTGGATCGATTCAGCAAA 58.168 39.130 6.64 0.00 0.00 3.68
5854 6270 5.431765 AGTAAGTGGATCGATTCAGCAAAT 58.568 37.500 6.64 0.00 0.00 2.32
5855 6271 6.582636 AGTAAGTGGATCGATTCAGCAAATA 58.417 36.000 6.64 0.00 0.00 1.40
5856 6272 7.220030 AGTAAGTGGATCGATTCAGCAAATAT 58.780 34.615 6.64 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.899239 CTCCCCTCGACGGCATGC 62.899 72.222 9.90 9.90 0.00 4.06
3 4 1.672854 TAACTCCCCTCGACGGCATG 61.673 60.000 0.00 0.00 0.00 4.06
5 6 2.036098 TAACTCCCCTCGACGGCA 59.964 61.111 0.00 0.00 0.00 5.69
6 7 2.783288 CCTAACTCCCCTCGACGGC 61.783 68.421 0.00 0.00 0.00 5.68
7 8 2.125961 CCCTAACTCCCCTCGACGG 61.126 68.421 0.00 0.00 0.00 4.79
8 9 1.077212 TCCCTAACTCCCCTCGACG 60.077 63.158 0.00 0.00 0.00 5.12
9 10 1.393487 GCTCCCTAACTCCCCTCGAC 61.393 65.000 0.00 0.00 0.00 4.20
10 11 1.076192 GCTCCCTAACTCCCCTCGA 60.076 63.158 0.00 0.00 0.00 4.04
11 12 1.381327 TGCTCCCTAACTCCCCTCG 60.381 63.158 0.00 0.00 0.00 4.63
12 13 0.032017 TCTGCTCCCTAACTCCCCTC 60.032 60.000 0.00 0.00 0.00 4.30
13 14 0.031616 CTCTGCTCCCTAACTCCCCT 60.032 60.000 0.00 0.00 0.00 4.79
14 15 1.051556 CCTCTGCTCCCTAACTCCCC 61.052 65.000 0.00 0.00 0.00 4.81
15 16 0.032017 TCCTCTGCTCCCTAACTCCC 60.032 60.000 0.00 0.00 0.00 4.30
16 17 1.408969 CTCCTCTGCTCCCTAACTCC 58.591 60.000 0.00 0.00 0.00 3.85
17 18 1.342574 ACCTCCTCTGCTCCCTAACTC 60.343 57.143 0.00 0.00 0.00 3.01
18 19 0.713579 ACCTCCTCTGCTCCCTAACT 59.286 55.000 0.00 0.00 0.00 2.24
19 20 1.208293 CAACCTCCTCTGCTCCCTAAC 59.792 57.143 0.00 0.00 0.00 2.34
20 21 1.078823 TCAACCTCCTCTGCTCCCTAA 59.921 52.381 0.00 0.00 0.00 2.69
21 22 0.710588 TCAACCTCCTCTGCTCCCTA 59.289 55.000 0.00 0.00 0.00 3.53
22 23 0.178891 TTCAACCTCCTCTGCTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
23 24 0.915364 ATTCAACCTCCTCTGCTCCC 59.085 55.000 0.00 0.00 0.00 4.30
24 25 2.016096 GCATTCAACCTCCTCTGCTCC 61.016 57.143 0.00 0.00 0.00 4.70
25 26 1.377536 GCATTCAACCTCCTCTGCTC 58.622 55.000 0.00 0.00 0.00 4.26
26 27 0.392193 CGCATTCAACCTCCTCTGCT 60.392 55.000 0.00 0.00 0.00 4.24
27 28 1.372087 CCGCATTCAACCTCCTCTGC 61.372 60.000 0.00 0.00 0.00 4.26
28 29 1.372087 GCCGCATTCAACCTCCTCTG 61.372 60.000 0.00 0.00 0.00 3.35
29 30 1.078143 GCCGCATTCAACCTCCTCT 60.078 57.895 0.00 0.00 0.00 3.69
30 31 1.078143 AGCCGCATTCAACCTCCTC 60.078 57.895 0.00 0.00 0.00 3.71
31 32 1.377725 CAGCCGCATTCAACCTCCT 60.378 57.895 0.00 0.00 0.00 3.69
32 33 1.244019 AACAGCCGCATTCAACCTCC 61.244 55.000 0.00 0.00 0.00 4.30
33 34 0.109597 CAACAGCCGCATTCAACCTC 60.110 55.000 0.00 0.00 0.00 3.85
34 35 1.959085 CAACAGCCGCATTCAACCT 59.041 52.632 0.00 0.00 0.00 3.50
35 36 1.734117 GCAACAGCCGCATTCAACC 60.734 57.895 0.00 0.00 0.00 3.77
36 37 1.734117 GGCAACAGCCGCATTCAAC 60.734 57.895 0.00 0.00 38.93 3.18
37 38 2.650196 GGCAACAGCCGCATTCAA 59.350 55.556 0.00 0.00 38.93 2.69
46 47 2.669569 TTCAGGCTCGGCAACAGC 60.670 61.111 0.00 0.00 39.18 4.40
47 48 0.886490 AACTTCAGGCTCGGCAACAG 60.886 55.000 0.00 0.00 0.00 3.16
48 49 0.465460 AAACTTCAGGCTCGGCAACA 60.465 50.000 0.00 0.00 0.00 3.33
49 50 1.519408 TAAACTTCAGGCTCGGCAAC 58.481 50.000 0.00 0.00 0.00 4.17
50 51 2.264005 TTAAACTTCAGGCTCGGCAA 57.736 45.000 0.00 0.00 0.00 4.52
51 52 2.264005 TTTAAACTTCAGGCTCGGCA 57.736 45.000 0.00 0.00 0.00 5.69
52 53 3.242772 GCTATTTAAACTTCAGGCTCGGC 60.243 47.826 0.00 0.00 0.00 5.54
53 54 3.001330 CGCTATTTAAACTTCAGGCTCGG 59.999 47.826 0.00 0.00 0.00 4.63
54 55 3.617263 ACGCTATTTAAACTTCAGGCTCG 59.383 43.478 0.00 0.00 0.00 5.03
55 56 4.728021 GCACGCTATTTAAACTTCAGGCTC 60.728 45.833 0.00 0.00 0.00 4.70
56 57 3.127030 GCACGCTATTTAAACTTCAGGCT 59.873 43.478 0.00 0.00 0.00 4.58
57 58 3.119990 TGCACGCTATTTAAACTTCAGGC 60.120 43.478 0.00 0.00 0.00 4.85
58 59 4.391830 TCTGCACGCTATTTAAACTTCAGG 59.608 41.667 0.00 0.00 0.00 3.86
59 60 5.530519 TCTGCACGCTATTTAAACTTCAG 57.469 39.130 0.00 0.00 0.00 3.02
60 61 5.163764 CCATCTGCACGCTATTTAAACTTCA 60.164 40.000 0.00 0.00 0.00 3.02
61 62 5.163754 ACCATCTGCACGCTATTTAAACTTC 60.164 40.000 0.00 0.00 0.00 3.01
62 63 4.700213 ACCATCTGCACGCTATTTAAACTT 59.300 37.500 0.00 0.00 0.00 2.66
63 64 4.261801 ACCATCTGCACGCTATTTAAACT 58.738 39.130 0.00 0.00 0.00 2.66
64 65 4.616181 ACCATCTGCACGCTATTTAAAC 57.384 40.909 0.00 0.00 0.00 2.01
65 66 4.814234 CCTACCATCTGCACGCTATTTAAA 59.186 41.667 0.00 0.00 0.00 1.52
66 67 4.377021 CCTACCATCTGCACGCTATTTAA 58.623 43.478 0.00 0.00 0.00 1.52
67 68 3.244078 CCCTACCATCTGCACGCTATTTA 60.244 47.826 0.00 0.00 0.00 1.40
68 69 2.485479 CCCTACCATCTGCACGCTATTT 60.485 50.000 0.00 0.00 0.00 1.40
69 70 1.070758 CCCTACCATCTGCACGCTATT 59.929 52.381 0.00 0.00 0.00 1.73
70 71 0.681733 CCCTACCATCTGCACGCTAT 59.318 55.000 0.00 0.00 0.00 2.97
71 72 2.028125 GCCCTACCATCTGCACGCTA 62.028 60.000 0.00 0.00 0.00 4.26
72 73 2.903357 CCCTACCATCTGCACGCT 59.097 61.111 0.00 0.00 0.00 5.07
73 74 2.897350 GCCCTACCATCTGCACGC 60.897 66.667 0.00 0.00 0.00 5.34
74 75 1.146930 ATGCCCTACCATCTGCACG 59.853 57.895 0.00 0.00 36.41 5.34
75 76 1.450531 GCATGCCCTACCATCTGCAC 61.451 60.000 6.36 0.00 36.41 4.57
76 77 1.152902 GCATGCCCTACCATCTGCA 60.153 57.895 6.36 0.00 38.23 4.41
77 78 0.752743 TTGCATGCCCTACCATCTGC 60.753 55.000 16.68 0.00 0.00 4.26
78 79 1.027357 GTTGCATGCCCTACCATCTG 58.973 55.000 16.68 0.00 0.00 2.90
79 80 0.464373 CGTTGCATGCCCTACCATCT 60.464 55.000 16.68 0.00 0.00 2.90
80 81 0.463654 TCGTTGCATGCCCTACCATC 60.464 55.000 16.68 0.00 0.00 3.51
81 82 0.464373 CTCGTTGCATGCCCTACCAT 60.464 55.000 16.68 0.00 0.00 3.55
82 83 1.078497 CTCGTTGCATGCCCTACCA 60.078 57.895 16.68 0.00 0.00 3.25
83 84 1.819632 CCTCGTTGCATGCCCTACC 60.820 63.158 16.68 0.00 0.00 3.18
84 85 1.078426 ACCTCGTTGCATGCCCTAC 60.078 57.895 16.68 9.78 0.00 3.18
85 86 1.078497 CACCTCGTTGCATGCCCTA 60.078 57.895 16.68 0.00 0.00 3.53
86 87 2.360350 CACCTCGTTGCATGCCCT 60.360 61.111 16.68 0.00 0.00 5.19
87 88 3.443045 CCACCTCGTTGCATGCCC 61.443 66.667 16.68 4.69 0.00 5.36
88 89 4.120331 GCCACCTCGTTGCATGCC 62.120 66.667 16.68 0.00 0.00 4.40
89 90 1.305219 TTAGCCACCTCGTTGCATGC 61.305 55.000 11.82 11.82 0.00 4.06
90 91 0.447801 GTTAGCCACCTCGTTGCATG 59.552 55.000 0.00 0.00 0.00 4.06
91 92 1.019278 CGTTAGCCACCTCGTTGCAT 61.019 55.000 0.00 0.00 0.00 3.96
92 93 1.666553 CGTTAGCCACCTCGTTGCA 60.667 57.895 0.00 0.00 0.00 4.08
93 94 2.388232 CCGTTAGCCACCTCGTTGC 61.388 63.158 0.00 0.00 0.00 4.17
94 95 1.005394 ACCGTTAGCCACCTCGTTG 60.005 57.895 0.00 0.00 0.00 4.10
95 96 1.005394 CACCGTTAGCCACCTCGTT 60.005 57.895 0.00 0.00 0.00 3.85
96 97 2.654877 CACCGTTAGCCACCTCGT 59.345 61.111 0.00 0.00 0.00 4.18
97 98 2.125673 CCACCGTTAGCCACCTCG 60.126 66.667 0.00 0.00 0.00 4.63
98 99 1.259840 TACCCACCGTTAGCCACCTC 61.260 60.000 0.00 0.00 0.00 3.85
99 100 0.837260 TTACCCACCGTTAGCCACCT 60.837 55.000 0.00 0.00 0.00 4.00
100 101 0.674581 GTTACCCACCGTTAGCCACC 60.675 60.000 0.00 0.00 0.00 4.61
101 102 0.035176 TGTTACCCACCGTTAGCCAC 59.965 55.000 0.00 0.00 0.00 5.01
102 103 0.322322 CTGTTACCCACCGTTAGCCA 59.678 55.000 0.00 0.00 0.00 4.75
103 104 0.609662 TCTGTTACCCACCGTTAGCC 59.390 55.000 0.00 0.00 0.00 3.93
104 105 1.718396 GTCTGTTACCCACCGTTAGC 58.282 55.000 0.00 0.00 0.00 3.09
105 106 1.403249 CCGTCTGTTACCCACCGTTAG 60.403 57.143 0.00 0.00 0.00 2.34
106 107 0.602562 CCGTCTGTTACCCACCGTTA 59.397 55.000 0.00 0.00 0.00 3.18
107 108 1.114722 TCCGTCTGTTACCCACCGTT 61.115 55.000 0.00 0.00 0.00 4.44
108 109 0.901580 ATCCGTCTGTTACCCACCGT 60.902 55.000 0.00 0.00 0.00 4.83
109 110 0.459585 CATCCGTCTGTTACCCACCG 60.460 60.000 0.00 0.00 0.00 4.94
110 111 0.899720 TCATCCGTCTGTTACCCACC 59.100 55.000 0.00 0.00 0.00 4.61
111 112 2.289195 TGTTCATCCGTCTGTTACCCAC 60.289 50.000 0.00 0.00 0.00 4.61
112 113 1.972075 TGTTCATCCGTCTGTTACCCA 59.028 47.619 0.00 0.00 0.00 4.51
113 114 2.618053 CTGTTCATCCGTCTGTTACCC 58.382 52.381 0.00 0.00 0.00 3.69
114 115 2.028385 ACCTGTTCATCCGTCTGTTACC 60.028 50.000 0.00 0.00 0.00 2.85
115 116 2.993899 CACCTGTTCATCCGTCTGTTAC 59.006 50.000 0.00 0.00 0.00 2.50
116 117 2.894765 TCACCTGTTCATCCGTCTGTTA 59.105 45.455 0.00 0.00 0.00 2.41
117 118 1.691976 TCACCTGTTCATCCGTCTGTT 59.308 47.619 0.00 0.00 0.00 3.16
118 119 1.000955 GTCACCTGTTCATCCGTCTGT 59.999 52.381 0.00 0.00 0.00 3.41
119 120 1.714794 GTCACCTGTTCATCCGTCTG 58.285 55.000 0.00 0.00 0.00 3.51
120 121 0.243907 CGTCACCTGTTCATCCGTCT 59.756 55.000 0.00 0.00 0.00 4.18
121 122 1.352156 GCGTCACCTGTTCATCCGTC 61.352 60.000 0.00 0.00 0.00 4.79
122 123 1.374252 GCGTCACCTGTTCATCCGT 60.374 57.895 0.00 0.00 0.00 4.69
123 124 1.079819 AGCGTCACCTGTTCATCCG 60.080 57.895 0.00 0.00 0.00 4.18
124 125 1.021390 CCAGCGTCACCTGTTCATCC 61.021 60.000 0.00 0.00 0.00 3.51
125 126 0.037326 TCCAGCGTCACCTGTTCATC 60.037 55.000 0.00 0.00 0.00 2.92
126 127 0.036952 CTCCAGCGTCACCTGTTCAT 60.037 55.000 0.00 0.00 0.00 2.57
127 128 1.367471 CTCCAGCGTCACCTGTTCA 59.633 57.895 0.00 0.00 0.00 3.18
128 129 2.029844 GCTCCAGCGTCACCTGTTC 61.030 63.158 0.00 0.00 0.00 3.18
129 130 2.031163 GCTCCAGCGTCACCTGTT 59.969 61.111 0.00 0.00 0.00 3.16
130 131 3.231889 CTGCTCCAGCGTCACCTGT 62.232 63.158 0.00 0.00 45.83 4.00
131 132 2.433838 CTGCTCCAGCGTCACCTG 60.434 66.667 0.00 0.00 45.83 4.00
132 133 3.699894 CCTGCTCCAGCGTCACCT 61.700 66.667 0.00 0.00 45.83 4.00
133 134 3.537206 AACCTGCTCCAGCGTCACC 62.537 63.158 0.00 0.00 45.83 4.02
134 135 2.029844 GAACCTGCTCCAGCGTCAC 61.030 63.158 0.00 0.00 45.83 3.67
135 136 2.343758 GAACCTGCTCCAGCGTCA 59.656 61.111 0.00 0.00 45.83 4.35
136 137 2.435059 GGAACCTGCTCCAGCGTC 60.435 66.667 0.00 0.00 45.83 5.19
137 138 2.925170 AGGAACCTGCTCCAGCGT 60.925 61.111 0.00 0.00 45.83 5.07
138 139 2.125350 GAGGAACCTGCTCCAGCG 60.125 66.667 0.00 0.00 45.83 5.18
139 140 2.125350 CGAGGAACCTGCTCCAGC 60.125 66.667 0.00 0.00 38.02 4.85
140 141 2.581354 CCGAGGAACCTGCTCCAG 59.419 66.667 0.00 0.00 38.02 3.86
141 142 3.706373 GCCGAGGAACCTGCTCCA 61.706 66.667 0.00 0.00 38.02 3.86
142 143 3.254024 TTGCCGAGGAACCTGCTCC 62.254 63.158 0.00 0.00 30.39 4.70
143 144 2.035442 GTTGCCGAGGAACCTGCTC 61.035 63.158 0.00 0.00 0.00 4.26
144 145 2.032681 GTTGCCGAGGAACCTGCT 59.967 61.111 0.00 0.00 0.00 4.24
145 146 3.056328 GGTTGCCGAGGAACCTGC 61.056 66.667 16.37 0.00 39.94 4.85
158 159 4.411327 CCTACATTAAACATGCACGGTTG 58.589 43.478 6.37 0.00 0.00 3.77
159 160 3.442273 CCCTACATTAAACATGCACGGTT 59.558 43.478 0.00 0.00 0.00 4.44
160 161 3.013921 CCCTACATTAAACATGCACGGT 58.986 45.455 0.00 0.00 0.00 4.83
161 162 3.275143 TCCCTACATTAAACATGCACGG 58.725 45.455 0.00 0.00 0.00 4.94
162 163 3.312421 CCTCCCTACATTAAACATGCACG 59.688 47.826 0.00 0.00 0.00 5.34
163 164 3.066760 GCCTCCCTACATTAAACATGCAC 59.933 47.826 0.00 0.00 0.00 4.57
164 165 3.287222 GCCTCCCTACATTAAACATGCA 58.713 45.455 0.00 0.00 0.00 3.96
165 166 2.290641 CGCCTCCCTACATTAAACATGC 59.709 50.000 0.00 0.00 0.00 4.06
166 167 2.878406 CCGCCTCCCTACATTAAACATG 59.122 50.000 0.00 0.00 0.00 3.21
167 168 2.775384 TCCGCCTCCCTACATTAAACAT 59.225 45.455 0.00 0.00 0.00 2.71
168 169 2.093341 GTCCGCCTCCCTACATTAAACA 60.093 50.000 0.00 0.00 0.00 2.83
169 170 2.093341 TGTCCGCCTCCCTACATTAAAC 60.093 50.000 0.00 0.00 0.00 2.01
170 171 2.189676 TGTCCGCCTCCCTACATTAAA 58.810 47.619 0.00 0.00 0.00 1.52
171 172 1.868713 TGTCCGCCTCCCTACATTAA 58.131 50.000 0.00 0.00 0.00 1.40
172 173 2.097110 ATGTCCGCCTCCCTACATTA 57.903 50.000 0.00 0.00 0.00 1.90
173 174 1.692519 GTATGTCCGCCTCCCTACATT 59.307 52.381 0.00 0.00 34.54 2.71
174 175 1.133136 AGTATGTCCGCCTCCCTACAT 60.133 52.381 0.00 0.00 36.56 2.29
175 176 0.260816 AGTATGTCCGCCTCCCTACA 59.739 55.000 0.00 0.00 0.00 2.74
176 177 0.674534 CAGTATGTCCGCCTCCCTAC 59.325 60.000 0.00 0.00 0.00 3.18
177 178 0.469331 CCAGTATGTCCGCCTCCCTA 60.469 60.000 0.00 0.00 0.00 3.53
178 179 1.762460 CCAGTATGTCCGCCTCCCT 60.762 63.158 0.00 0.00 0.00 4.20
179 180 1.122019 ATCCAGTATGTCCGCCTCCC 61.122 60.000 0.00 0.00 0.00 4.30
180 181 0.034059 CATCCAGTATGTCCGCCTCC 59.966 60.000 0.00 0.00 0.00 4.30
181 182 0.753262 ACATCCAGTATGTCCGCCTC 59.247 55.000 0.00 0.00 46.15 4.70
182 183 2.916355 ACATCCAGTATGTCCGCCT 58.084 52.632 0.00 0.00 46.15 5.52
189 190 4.496341 GGCGTTCAAATGACATCCAGTATG 60.496 45.833 0.00 0.00 41.74 2.39
190 191 3.627577 GGCGTTCAAATGACATCCAGTAT 59.372 43.478 0.00 0.00 0.00 2.12
191 192 3.006940 GGCGTTCAAATGACATCCAGTA 58.993 45.455 0.00 0.00 0.00 2.74
192 193 1.812571 GGCGTTCAAATGACATCCAGT 59.187 47.619 0.00 0.00 0.00 4.00
193 194 1.202065 CGGCGTTCAAATGACATCCAG 60.202 52.381 0.00 0.00 0.00 3.86
194 195 0.801872 CGGCGTTCAAATGACATCCA 59.198 50.000 0.00 0.00 0.00 3.41
195 196 1.083489 TCGGCGTTCAAATGACATCC 58.917 50.000 6.85 0.00 0.00 3.51
196 197 2.351418 TGATCGGCGTTCAAATGACATC 59.649 45.455 17.52 4.72 0.00 3.06
197 198 2.352651 CTGATCGGCGTTCAAATGACAT 59.647 45.455 19.85 0.00 0.00 3.06
198 199 1.731709 CTGATCGGCGTTCAAATGACA 59.268 47.619 19.85 0.00 0.00 3.58
199 200 1.732259 ACTGATCGGCGTTCAAATGAC 59.268 47.619 19.85 0.00 0.00 3.06
200 201 1.999735 GACTGATCGGCGTTCAAATGA 59.000 47.619 19.85 0.00 0.00 2.57
201 202 1.267038 CGACTGATCGGCGTTCAAATG 60.267 52.381 19.85 11.92 44.99 2.32
202 203 0.999406 CGACTGATCGGCGTTCAAAT 59.001 50.000 19.85 12.01 44.99 2.32
203 204 2.441023 CGACTGATCGGCGTTCAAA 58.559 52.632 19.85 0.46 44.99 2.69
204 205 4.162640 CGACTGATCGGCGTTCAA 57.837 55.556 19.85 6.13 44.99 2.69
213 214 3.545481 CGGTGCACGCGACTGATC 61.545 66.667 15.93 0.00 34.82 2.92
241 242 3.197790 CATTGAGAGCACCGCCCG 61.198 66.667 0.00 0.00 0.00 6.13
242 243 3.512516 GCATTGAGAGCACCGCCC 61.513 66.667 0.00 0.00 0.00 6.13
243 244 3.512516 GGCATTGAGAGCACCGCC 61.513 66.667 0.00 0.00 35.23 6.13
244 245 3.869272 CGGCATTGAGAGCACCGC 61.869 66.667 0.00 0.00 37.05 5.68
245 246 3.197790 CCGGCATTGAGAGCACCG 61.198 66.667 0.00 0.00 43.44 4.94
246 247 1.817099 CTCCGGCATTGAGAGCACC 60.817 63.158 0.00 0.00 31.26 5.01
247 248 3.805267 CTCCGGCATTGAGAGCAC 58.195 61.111 0.00 0.00 31.26 4.40
250 251 1.880340 GTCGCTCCGGCATTGAGAG 60.880 63.158 0.00 0.00 38.60 3.20
251 252 2.184322 GTCGCTCCGGCATTGAGA 59.816 61.111 0.00 0.00 38.60 3.27
252 253 2.892425 GGTCGCTCCGGCATTGAG 60.892 66.667 0.00 0.00 38.60 3.02
253 254 3.390521 AGGTCGCTCCGGCATTGA 61.391 61.111 0.00 0.00 41.99 2.57
254 255 3.197790 CAGGTCGCTCCGGCATTG 61.198 66.667 0.00 0.00 41.99 2.82
255 256 2.463589 TTTCAGGTCGCTCCGGCATT 62.464 55.000 0.00 0.00 41.99 3.56
256 257 2.859273 CTTTCAGGTCGCTCCGGCAT 62.859 60.000 0.00 0.00 41.99 4.40
257 258 3.589654 CTTTCAGGTCGCTCCGGCA 62.590 63.158 0.00 0.00 41.99 5.69
258 259 2.815647 CTTTCAGGTCGCTCCGGC 60.816 66.667 0.00 0.00 41.99 6.13
259 260 2.125512 CCTTTCAGGTCGCTCCGG 60.126 66.667 0.00 0.00 41.99 5.14
268 269 1.247567 AATGGACGCAACCTTTCAGG 58.752 50.000 0.00 0.00 42.49 3.86
269 270 3.052036 CAAAATGGACGCAACCTTTCAG 58.948 45.455 0.00 0.00 0.00 3.02
270 271 2.223923 CCAAAATGGACGCAACCTTTCA 60.224 45.455 0.00 0.00 40.96 2.69
271 272 2.403259 CCAAAATGGACGCAACCTTTC 58.597 47.619 0.00 0.00 40.96 2.62
272 273 1.069978 CCCAAAATGGACGCAACCTTT 59.930 47.619 0.00 0.00 40.96 3.11
273 274 0.678950 CCCAAAATGGACGCAACCTT 59.321 50.000 0.00 0.00 40.96 3.50
274 275 1.815817 GCCCAAAATGGACGCAACCT 61.816 55.000 0.00 0.00 40.96 3.50
275 276 1.374125 GCCCAAAATGGACGCAACC 60.374 57.895 0.00 0.00 40.96 3.77
276 277 0.667184 CTGCCCAAAATGGACGCAAC 60.667 55.000 0.00 0.00 40.96 4.17
277 278 1.664873 CTGCCCAAAATGGACGCAA 59.335 52.632 0.00 0.00 40.96 4.85
278 279 2.274645 CCTGCCCAAAATGGACGCA 61.275 57.895 0.00 0.00 40.96 5.24
279 280 2.573340 CCTGCCCAAAATGGACGC 59.427 61.111 0.00 0.00 40.96 5.19
280 281 1.606885 ATGCCTGCCCAAAATGGACG 61.607 55.000 0.00 0.00 40.96 4.79
281 282 0.108041 CATGCCTGCCCAAAATGGAC 60.108 55.000 0.00 0.00 40.96 4.02
282 283 0.252148 TCATGCCTGCCCAAAATGGA 60.252 50.000 0.00 0.00 40.96 3.41
283 284 0.614294 TTCATGCCTGCCCAAAATGG 59.386 50.000 0.00 0.00 37.25 3.16
284 285 2.285083 CATTCATGCCTGCCCAAAATG 58.715 47.619 0.00 0.00 0.00 2.32
285 286 2.702592 CATTCATGCCTGCCCAAAAT 57.297 45.000 0.00 0.00 0.00 1.82
297 298 2.404789 GTCACCGCCGCATTCATG 59.595 61.111 0.00 0.00 0.00 3.07
298 299 3.195002 CGTCACCGCCGCATTCAT 61.195 61.111 0.00 0.00 0.00 2.57
316 317 4.803426 GTCACCGCCGCTCCAGAG 62.803 72.222 0.00 0.00 0.00 3.35
328 329 3.047877 CCGTCCAAAGCGGTCACC 61.048 66.667 0.00 0.00 43.84 4.02
334 335 1.574428 CAGTTTCCCGTCCAAAGCG 59.426 57.895 0.00 0.00 0.00 4.68
335 336 1.172812 AGCAGTTTCCCGTCCAAAGC 61.173 55.000 0.00 0.00 0.00 3.51
336 337 0.875059 GAGCAGTTTCCCGTCCAAAG 59.125 55.000 0.00 0.00 0.00 2.77
337 338 0.882927 CGAGCAGTTTCCCGTCCAAA 60.883 55.000 0.00 0.00 0.00 3.28
338 339 1.301401 CGAGCAGTTTCCCGTCCAA 60.301 57.895 0.00 0.00 0.00 3.53
339 340 2.154798 CTCGAGCAGTTTCCCGTCCA 62.155 60.000 0.00 0.00 0.00 4.02
340 341 1.446272 CTCGAGCAGTTTCCCGTCC 60.446 63.158 0.00 0.00 0.00 4.79
341 342 2.095252 GCTCGAGCAGTTTCCCGTC 61.095 63.158 31.91 0.00 41.59 4.79
342 343 2.048127 GCTCGAGCAGTTTCCCGT 60.048 61.111 31.91 0.00 41.59 5.28
343 344 3.181967 CGCTCGAGCAGTTTCCCG 61.182 66.667 34.69 13.81 42.21 5.14
344 345 2.781595 TTCCGCTCGAGCAGTTTCCC 62.782 60.000 34.69 5.29 42.21 3.97
345 346 1.355066 CTTCCGCTCGAGCAGTTTCC 61.355 60.000 34.69 6.06 42.21 3.13
346 347 0.388649 TCTTCCGCTCGAGCAGTTTC 60.389 55.000 34.69 6.81 42.21 2.78
347 348 0.389166 CTCTTCCGCTCGAGCAGTTT 60.389 55.000 34.69 0.00 42.21 2.66
348 349 1.214062 CTCTTCCGCTCGAGCAGTT 59.786 57.895 34.69 0.00 42.21 3.16
349 350 2.705821 CCTCTTCCGCTCGAGCAGT 61.706 63.158 34.69 0.00 42.21 4.40
350 351 2.103934 CCTCTTCCGCTCGAGCAG 59.896 66.667 34.69 25.48 42.21 4.24
351 352 3.452786 CCCTCTTCCGCTCGAGCA 61.453 66.667 34.69 15.88 42.21 4.26
352 353 2.508586 AAACCCTCTTCCGCTCGAGC 62.509 60.000 27.64 27.64 37.78 5.03
353 354 0.737715 CAAACCCTCTTCCGCTCGAG 60.738 60.000 8.45 8.45 0.00 4.04
354 355 1.292223 CAAACCCTCTTCCGCTCGA 59.708 57.895 0.00 0.00 0.00 4.04
355 356 1.004918 ACAAACCCTCTTCCGCTCG 60.005 57.895 0.00 0.00 0.00 5.03
356 357 0.250338 ACACAAACCCTCTTCCGCTC 60.250 55.000 0.00 0.00 0.00 5.03
357 358 0.535102 CACACAAACCCTCTTCCGCT 60.535 55.000 0.00 0.00 0.00 5.52
358 359 1.515521 CCACACAAACCCTCTTCCGC 61.516 60.000 0.00 0.00 0.00 5.54
359 360 0.889186 CCCACACAAACCCTCTTCCG 60.889 60.000 0.00 0.00 0.00 4.30
360 361 1.179174 GCCCACACAAACCCTCTTCC 61.179 60.000 0.00 0.00 0.00 3.46
361 362 1.179174 GGCCCACACAAACCCTCTTC 61.179 60.000 0.00 0.00 0.00 2.87
362 363 1.152546 GGCCCACACAAACCCTCTT 60.153 57.895 0.00 0.00 0.00 2.85
363 364 2.357593 CTGGCCCACACAAACCCTCT 62.358 60.000 0.00 0.00 0.00 3.69
364 365 1.903404 CTGGCCCACACAAACCCTC 60.903 63.158 0.00 0.00 0.00 4.30
365 366 2.198426 CTGGCCCACACAAACCCT 59.802 61.111 0.00 0.00 0.00 4.34
366 367 2.917227 CCTGGCCCACACAAACCC 60.917 66.667 0.00 0.00 0.00 4.11
367 368 2.917227 CCCTGGCCCACACAAACC 60.917 66.667 0.00 0.00 0.00 3.27
368 369 2.197324 TCCCTGGCCCACACAAAC 59.803 61.111 0.00 0.00 0.00 2.93
369 370 2.017668 ATGTCCCTGGCCCACACAAA 62.018 55.000 0.00 0.00 0.00 2.83
370 371 2.017668 AATGTCCCTGGCCCACACAA 62.018 55.000 0.00 0.00 0.00 3.33
371 372 2.468868 AATGTCCCTGGCCCACACA 61.469 57.895 0.00 0.00 0.00 3.72
372 373 1.978617 CAATGTCCCTGGCCCACAC 60.979 63.158 0.00 0.00 0.00 3.82
373 374 2.440147 CAATGTCCCTGGCCCACA 59.560 61.111 0.00 0.00 0.00 4.17
374 375 2.228841 ATCCAATGTCCCTGGCCCAC 62.229 60.000 0.00 0.00 33.63 4.61
375 376 1.935400 ATCCAATGTCCCTGGCCCA 60.935 57.895 0.00 0.00 33.63 5.36
376 377 1.456331 CATCCAATGTCCCTGGCCC 60.456 63.158 0.00 0.00 33.63 5.80
377 378 0.324645 AACATCCAATGTCCCTGGCC 60.325 55.000 0.00 0.00 44.07 5.36
378 379 1.205417 CAAACATCCAATGTCCCTGGC 59.795 52.381 0.00 0.00 44.07 4.85
379 380 1.205417 GCAAACATCCAATGTCCCTGG 59.795 52.381 0.00 0.00 44.07 4.45
380 381 1.135315 CGCAAACATCCAATGTCCCTG 60.135 52.381 0.00 0.00 44.07 4.45
381 382 1.176527 CGCAAACATCCAATGTCCCT 58.823 50.000 0.00 0.00 44.07 4.20
382 383 0.887933 ACGCAAACATCCAATGTCCC 59.112 50.000 0.00 0.00 44.07 4.46
383 384 1.402720 CCACGCAAACATCCAATGTCC 60.403 52.381 0.00 0.00 44.07 4.02
384 385 1.981254 CCACGCAAACATCCAATGTC 58.019 50.000 0.00 0.00 44.07 3.06
385 386 2.698987 TGCCACGCAAACATCCAATGT 61.699 47.619 0.00 0.00 38.36 2.71
386 387 0.038435 TGCCACGCAAACATCCAATG 60.038 50.000 0.00 0.00 34.76 2.82
387 388 0.244450 CTGCCACGCAAACATCCAAT 59.756 50.000 0.00 0.00 38.41 3.16
388 389 1.659233 CTGCCACGCAAACATCCAA 59.341 52.632 0.00 0.00 38.41 3.53
389 390 2.918345 GCTGCCACGCAAACATCCA 61.918 57.895 0.00 0.00 38.41 3.41
390 391 2.126346 GCTGCCACGCAAACATCC 60.126 61.111 0.00 0.00 38.41 3.51
391 392 1.007502 TTGCTGCCACGCAAACATC 60.008 52.632 0.00 0.00 46.00 3.06
392 393 3.127451 TTGCTGCCACGCAAACAT 58.873 50.000 0.00 0.00 46.00 2.71
397 398 2.198969 TTTGGATTGCTGCCACGCA 61.199 52.632 0.00 0.00 38.31 5.24
398 399 1.734117 GTTTGGATTGCTGCCACGC 60.734 57.895 0.00 0.00 34.56 5.34
399 400 0.109597 GAGTTTGGATTGCTGCCACG 60.110 55.000 0.00 0.00 34.56 4.94
400 401 0.244721 GGAGTTTGGATTGCTGCCAC 59.755 55.000 0.00 0.00 34.56 5.01
401 402 0.899717 GGGAGTTTGGATTGCTGCCA 60.900 55.000 0.00 0.00 39.97 4.92
402 403 1.893062 GGGAGTTTGGATTGCTGCC 59.107 57.895 0.00 0.00 33.80 4.85
403 404 1.508088 CGGGAGTTTGGATTGCTGC 59.492 57.895 0.00 0.00 0.00 5.25
404 405 1.508088 GCGGGAGTTTGGATTGCTG 59.492 57.895 0.00 0.00 0.00 4.41
405 406 2.040544 CGCGGGAGTTTGGATTGCT 61.041 57.895 0.00 0.00 0.00 3.91
406 407 1.582610 TTCGCGGGAGTTTGGATTGC 61.583 55.000 6.13 0.00 0.00 3.56
407 408 0.447801 CTTCGCGGGAGTTTGGATTG 59.552 55.000 6.13 0.00 0.00 2.67
408 409 1.305930 GCTTCGCGGGAGTTTGGATT 61.306 55.000 6.13 0.00 0.00 3.01
409 410 1.745489 GCTTCGCGGGAGTTTGGAT 60.745 57.895 6.13 0.00 0.00 3.41
410 411 2.358247 GCTTCGCGGGAGTTTGGA 60.358 61.111 6.13 0.00 0.00 3.53
411 412 3.431725 GGCTTCGCGGGAGTTTGG 61.432 66.667 6.13 0.00 0.00 3.28
412 413 3.431725 GGGCTTCGCGGGAGTTTG 61.432 66.667 6.13 0.00 0.00 2.93
413 414 4.717313 GGGGCTTCGCGGGAGTTT 62.717 66.667 6.13 0.00 0.00 2.66
419 420 2.515996 TAAACTGAGGGGCTTCGCGG 62.516 60.000 6.13 0.00 0.00 6.46
420 421 1.079405 TAAACTGAGGGGCTTCGCG 60.079 57.895 0.00 0.00 0.00 5.87
421 422 0.036294 AGTAAACTGAGGGGCTTCGC 60.036 55.000 0.00 0.00 0.00 4.70
422 423 2.347731 GAAGTAAACTGAGGGGCTTCG 58.652 52.381 0.00 0.00 0.00 3.79
423 424 2.712709 GGAAGTAAACTGAGGGGCTTC 58.287 52.381 0.00 0.00 33.63 3.86
424 425 1.003233 CGGAAGTAAACTGAGGGGCTT 59.997 52.381 0.00 0.00 0.00 4.35
425 426 0.613777 CGGAAGTAAACTGAGGGGCT 59.386 55.000 0.00 0.00 0.00 5.19
426 427 0.392595 CCGGAAGTAAACTGAGGGGC 60.393 60.000 0.00 0.00 0.00 5.80
427 428 0.981943 ACCGGAAGTAAACTGAGGGG 59.018 55.000 9.46 0.00 0.00 4.79
428 429 2.853235 AACCGGAAGTAAACTGAGGG 57.147 50.000 9.46 0.00 0.00 4.30
429 430 5.731591 AGATTAACCGGAAGTAAACTGAGG 58.268 41.667 9.46 0.00 0.00 3.86
430 431 6.531948 CAGAGATTAACCGGAAGTAAACTGAG 59.468 42.308 9.46 0.00 0.00 3.35
431 432 6.014840 ACAGAGATTAACCGGAAGTAAACTGA 60.015 38.462 9.46 0.00 0.00 3.41
432 433 6.164176 ACAGAGATTAACCGGAAGTAAACTG 58.836 40.000 9.46 12.38 0.00 3.16
433 434 6.210984 AGACAGAGATTAACCGGAAGTAAACT 59.789 38.462 9.46 7.60 0.00 2.66
434 435 6.396450 AGACAGAGATTAACCGGAAGTAAAC 58.604 40.000 9.46 2.47 0.00 2.01
435 436 6.436532 AGAGACAGAGATTAACCGGAAGTAAA 59.563 38.462 9.46 0.00 0.00 2.01
436 437 5.950549 AGAGACAGAGATTAACCGGAAGTAA 59.049 40.000 9.46 3.75 0.00 2.24
437 438 5.507637 AGAGACAGAGATTAACCGGAAGTA 58.492 41.667 9.46 0.00 0.00 2.24
438 439 4.345854 AGAGACAGAGATTAACCGGAAGT 58.654 43.478 9.46 0.00 0.00 3.01
439 440 4.993029 AGAGACAGAGATTAACCGGAAG 57.007 45.455 9.46 0.00 0.00 3.46
440 441 5.357314 CAGTAGAGACAGAGATTAACCGGAA 59.643 44.000 9.46 0.00 0.00 4.30
441 442 4.882427 CAGTAGAGACAGAGATTAACCGGA 59.118 45.833 9.46 0.00 0.00 5.14
442 443 4.498345 GCAGTAGAGACAGAGATTAACCGG 60.498 50.000 0.00 0.00 0.00 5.28
443 444 4.336993 AGCAGTAGAGACAGAGATTAACCG 59.663 45.833 0.00 0.00 0.00 4.44
444 445 5.845391 AGCAGTAGAGACAGAGATTAACC 57.155 43.478 0.00 0.00 0.00 2.85
449 450 9.360901 TGATTATTAAGCAGTAGAGACAGAGAT 57.639 33.333 0.00 0.00 0.00 2.75
450 451 8.753497 TGATTATTAAGCAGTAGAGACAGAGA 57.247 34.615 0.00 0.00 0.00 3.10
451 452 9.979578 ATTGATTATTAAGCAGTAGAGACAGAG 57.020 33.333 0.00 0.00 0.00 3.35
452 453 9.973450 GATTGATTATTAAGCAGTAGAGACAGA 57.027 33.333 0.00 0.00 0.00 3.41
453 454 9.755804 TGATTGATTATTAAGCAGTAGAGACAG 57.244 33.333 0.00 0.00 0.00 3.51
454 455 9.534565 GTGATTGATTATTAAGCAGTAGAGACA 57.465 33.333 0.00 0.00 0.00 3.41
455 456 8.983724 GGTGATTGATTATTAAGCAGTAGAGAC 58.016 37.037 0.00 0.00 0.00 3.36
456 457 8.928448 AGGTGATTGATTATTAAGCAGTAGAGA 58.072 33.333 0.00 0.00 0.00 3.10
457 458 9.553064 AAGGTGATTGATTATTAAGCAGTAGAG 57.447 33.333 0.00 0.00 0.00 2.43
487 488 9.297037 AGTGCAATTGTTTTAGAAGGTAAGTAT 57.703 29.630 7.40 0.00 0.00 2.12
488 489 8.685838 AGTGCAATTGTTTTAGAAGGTAAGTA 57.314 30.769 7.40 0.00 0.00 2.24
489 490 7.582667 AGTGCAATTGTTTTAGAAGGTAAGT 57.417 32.000 7.40 0.00 0.00 2.24
490 491 8.871686 AAAGTGCAATTGTTTTAGAAGGTAAG 57.128 30.769 7.40 0.00 0.00 2.34
493 494 9.830975 AATTAAAGTGCAATTGTTTTAGAAGGT 57.169 25.926 7.40 0.00 0.00 3.50
631 632 8.575589 TGCATCGCAACAGGATATAAATATTTT 58.424 29.630 5.91 0.00 34.76 1.82
632 633 8.023128 GTGCATCGCAACAGGATATAAATATTT 58.977 33.333 5.89 5.89 41.47 1.40
633 634 7.530010 GTGCATCGCAACAGGATATAAATATT 58.470 34.615 0.00 0.00 41.47 1.28
634 635 6.183360 CGTGCATCGCAACAGGATATAAATAT 60.183 38.462 0.00 0.00 41.47 1.28
635 636 5.120053 CGTGCATCGCAACAGGATATAAATA 59.880 40.000 0.00 0.00 41.47 1.40
636 637 4.083855 CGTGCATCGCAACAGGATATAAAT 60.084 41.667 0.00 0.00 41.47 1.40
637 638 3.247411 CGTGCATCGCAACAGGATATAAA 59.753 43.478 0.00 0.00 41.47 1.40
638 639 2.799978 CGTGCATCGCAACAGGATATAA 59.200 45.455 0.00 0.00 41.47 0.98
639 640 2.403259 CGTGCATCGCAACAGGATATA 58.597 47.619 0.00 0.00 41.47 0.86
640 641 1.220529 CGTGCATCGCAACAGGATAT 58.779 50.000 0.00 0.00 41.47 1.63
641 642 0.809636 CCGTGCATCGCAACAGGATA 60.810 55.000 0.00 0.00 41.47 2.59
642 643 2.108514 CCGTGCATCGCAACAGGAT 61.109 57.895 0.00 0.00 41.47 3.24
643 644 2.741985 CCGTGCATCGCAACAGGA 60.742 61.111 0.00 0.00 41.47 3.86
644 645 2.741985 TCCGTGCATCGCAACAGG 60.742 61.111 0.00 0.00 41.47 4.00
645 646 1.638388 ATGTCCGTGCATCGCAACAG 61.638 55.000 14.84 0.00 41.47 3.16
646 647 1.233950 AATGTCCGTGCATCGCAACA 61.234 50.000 13.18 13.18 41.47 3.33
647 648 0.724549 TAATGTCCGTGCATCGCAAC 59.275 50.000 0.00 0.00 41.47 4.17
648 649 1.662517 ATAATGTCCGTGCATCGCAA 58.337 45.000 0.00 0.00 41.47 4.85
649 650 1.662517 AATAATGTCCGTGCATCGCA 58.337 45.000 0.00 0.00 38.35 5.10
650 651 2.755836 AAATAATGTCCGTGCATCGC 57.244 45.000 0.00 0.00 38.35 4.58
651 652 5.403897 ACTAAAATAATGTCCGTGCATCG 57.596 39.130 0.00 0.00 39.52 3.84
652 653 6.199531 TCGTACTAAAATAATGTCCGTGCATC 59.800 38.462 0.00 0.00 0.00 3.91
653 654 6.044046 TCGTACTAAAATAATGTCCGTGCAT 58.956 36.000 0.00 0.00 0.00 3.96
654 655 5.409211 TCGTACTAAAATAATGTCCGTGCA 58.591 37.500 0.00 0.00 0.00 4.57
655 656 5.745294 TCTCGTACTAAAATAATGTCCGTGC 59.255 40.000 0.00 0.00 0.00 5.34
656 657 7.745022 TTCTCGTACTAAAATAATGTCCGTG 57.255 36.000 0.00 0.00 0.00 4.94
657 658 8.761575 TTTTCTCGTACTAAAATAATGTCCGT 57.238 30.769 0.00 0.00 0.00 4.69
666 667 9.755064 CGAATGTCATTTTTCTCGTACTAAAAT 57.245 29.630 0.00 0.00 33.12 1.82
667 668 8.980610 TCGAATGTCATTTTTCTCGTACTAAAA 58.019 29.630 0.00 0.00 0.00 1.52
668 669 8.523523 TCGAATGTCATTTTTCTCGTACTAAA 57.476 30.769 0.00 0.00 0.00 1.85
669 670 8.430063 GTTCGAATGTCATTTTTCTCGTACTAA 58.570 33.333 0.00 0.00 0.00 2.24
670 671 7.062605 GGTTCGAATGTCATTTTTCTCGTACTA 59.937 37.037 0.00 0.00 30.46 1.82
671 672 6.128634 GGTTCGAATGTCATTTTTCTCGTACT 60.129 38.462 0.00 0.00 30.46 2.73
672 673 6.013689 GGTTCGAATGTCATTTTTCTCGTAC 58.986 40.000 0.00 2.79 0.00 3.67
673 674 5.697178 TGGTTCGAATGTCATTTTTCTCGTA 59.303 36.000 0.00 0.00 0.00 3.43
674 675 4.513692 TGGTTCGAATGTCATTTTTCTCGT 59.486 37.500 0.00 0.00 0.00 4.18
675 676 5.029650 TGGTTCGAATGTCATTTTTCTCG 57.970 39.130 0.00 0.00 0.00 4.04
691 692 6.073058 ACAATATGGATTCATTCGATGGTTCG 60.073 38.462 0.00 0.00 39.42 3.95
692 693 7.080099 CACAATATGGATTCATTCGATGGTTC 58.920 38.462 0.00 0.00 34.96 3.62
693 694 6.973843 CACAATATGGATTCATTCGATGGTT 58.026 36.000 0.00 0.00 34.96 3.67
694 695 6.564709 CACAATATGGATTCATTCGATGGT 57.435 37.500 0.00 0.00 34.96 3.55
709 710 2.569059 CCTCAGACTGCCCACAATATG 58.431 52.381 0.00 0.00 0.00 1.78
710 711 1.492176 CCCTCAGACTGCCCACAATAT 59.508 52.381 0.00 0.00 0.00 1.28
711 712 0.911769 CCCTCAGACTGCCCACAATA 59.088 55.000 0.00 0.00 0.00 1.90
712 713 1.136329 ACCCTCAGACTGCCCACAAT 61.136 55.000 0.00 0.00 0.00 2.71
713 714 1.768684 GACCCTCAGACTGCCCACAA 61.769 60.000 0.00 0.00 0.00 3.33
714 715 2.122413 ACCCTCAGACTGCCCACA 60.122 61.111 0.00 0.00 0.00 4.17
715 716 2.665603 GACCCTCAGACTGCCCAC 59.334 66.667 0.00 0.00 0.00 4.61
716 717 2.607750 GGACCCTCAGACTGCCCA 60.608 66.667 0.00 0.00 0.00 5.36
717 718 2.224159 TTGGACCCTCAGACTGCCC 61.224 63.158 0.00 0.00 0.00 5.36
718 719 1.003233 GTTGGACCCTCAGACTGCC 60.003 63.158 0.00 0.00 0.00 4.85
719 720 1.374758 CGTTGGACCCTCAGACTGC 60.375 63.158 0.00 0.00 0.00 4.40
720 721 1.185618 TCCGTTGGACCCTCAGACTG 61.186 60.000 0.00 0.00 0.00 3.51
721 722 0.900647 CTCCGTTGGACCCTCAGACT 60.901 60.000 0.00 0.00 0.00 3.24
722 723 0.898789 TCTCCGTTGGACCCTCAGAC 60.899 60.000 0.00 0.00 0.00 3.51
723 724 0.041238 ATCTCCGTTGGACCCTCAGA 59.959 55.000 0.00 0.00 0.00 3.27
724 725 0.176680 CATCTCCGTTGGACCCTCAG 59.823 60.000 0.00 0.00 0.00 3.35
725 726 1.899437 GCATCTCCGTTGGACCCTCA 61.899 60.000 0.00 0.00 0.00 3.86
726 727 1.153349 GCATCTCCGTTGGACCCTC 60.153 63.158 0.00 0.00 0.00 4.30
727 728 2.670148 GGCATCTCCGTTGGACCCT 61.670 63.158 0.00 0.00 0.00 4.34
728 729 2.124695 GGCATCTCCGTTGGACCC 60.125 66.667 0.00 0.00 0.00 4.46
729 730 0.608035 TTTGGCATCTCCGTTGGACC 60.608 55.000 0.00 0.00 37.80 4.46
730 731 0.521735 GTTTGGCATCTCCGTTGGAC 59.478 55.000 0.00 0.00 37.80 4.02
731 732 0.109532 TGTTTGGCATCTCCGTTGGA 59.890 50.000 0.00 0.00 37.80 3.53
732 733 0.958091 TTGTTTGGCATCTCCGTTGG 59.042 50.000 0.00 0.00 37.80 3.77
733 734 1.335872 GGTTGTTTGGCATCTCCGTTG 60.336 52.381 0.00 0.00 37.80 4.10
734 735 0.958822 GGTTGTTTGGCATCTCCGTT 59.041 50.000 0.00 0.00 37.80 4.44
735 736 0.893727 GGGTTGTTTGGCATCTCCGT 60.894 55.000 0.00 0.00 37.80 4.69
736 737 0.893270 TGGGTTGTTTGGCATCTCCG 60.893 55.000 0.00 0.00 37.80 4.63
737 738 1.337118 TTGGGTTGTTTGGCATCTCC 58.663 50.000 0.00 0.00 0.00 3.71
738 739 3.467374 TTTTGGGTTGTTTGGCATCTC 57.533 42.857 0.00 0.00 0.00 2.75
739 740 3.922171 TTTTTGGGTTGTTTGGCATCT 57.078 38.095 0.00 0.00 0.00 2.90
762 763 7.123397 ACTCTTCTCTGCCTTTTTCTTCTTTTT 59.877 33.333 0.00 0.00 0.00 1.94
763 764 6.605194 ACTCTTCTCTGCCTTTTTCTTCTTTT 59.395 34.615 0.00 0.00 0.00 2.27
764 765 6.039159 CACTCTTCTCTGCCTTTTTCTTCTTT 59.961 38.462 0.00 0.00 0.00 2.52
765 766 5.530543 CACTCTTCTCTGCCTTTTTCTTCTT 59.469 40.000 0.00 0.00 0.00 2.52
766 767 5.062528 CACTCTTCTCTGCCTTTTTCTTCT 58.937 41.667 0.00 0.00 0.00 2.85
767 768 4.819088 ACACTCTTCTCTGCCTTTTTCTTC 59.181 41.667 0.00 0.00 0.00 2.87
768 769 4.786425 ACACTCTTCTCTGCCTTTTTCTT 58.214 39.130 0.00 0.00 0.00 2.52
769 770 4.429854 ACACTCTTCTCTGCCTTTTTCT 57.570 40.909 0.00 0.00 0.00 2.52
770 771 6.619801 TTTACACTCTTCTCTGCCTTTTTC 57.380 37.500 0.00 0.00 0.00 2.29
873 877 6.982724 CAGATGGGCTAAAATCTTTTCAATCC 59.017 38.462 0.00 0.00 30.62 3.01
949 955 2.204705 AGGGGGAGGAGGAGGAGT 60.205 66.667 0.00 0.00 0.00 3.85
963 969 2.319410 CTAGGGGAGGAGTGGGAGGG 62.319 70.000 0.00 0.00 0.00 4.30
964 970 1.234529 CTAGGGGAGGAGTGGGAGG 59.765 68.421 0.00 0.00 0.00 4.30
965 971 1.458588 GCTAGGGGAGGAGTGGGAG 60.459 68.421 0.00 0.00 0.00 4.30
966 972 2.696893 GCTAGGGGAGGAGTGGGA 59.303 66.667 0.00 0.00 0.00 4.37
967 973 2.446802 GGCTAGGGGAGGAGTGGG 60.447 72.222 0.00 0.00 0.00 4.61
968 974 1.458588 GAGGCTAGGGGAGGAGTGG 60.459 68.421 0.00 0.00 0.00 4.00
969 975 1.830408 CGAGGCTAGGGGAGGAGTG 60.830 68.421 0.00 0.00 0.00 3.51
970 976 2.604152 CGAGGCTAGGGGAGGAGT 59.396 66.667 0.00 0.00 0.00 3.85
971 977 2.915137 GCGAGGCTAGGGGAGGAG 60.915 72.222 0.00 0.00 0.00 3.69
972 978 4.896829 CGCGAGGCTAGGGGAGGA 62.897 72.222 0.00 0.00 0.00 3.71
974 980 3.597728 GACGCGAGGCTAGGGGAG 61.598 72.222 15.93 0.00 34.96 4.30
1247 1289 2.743928 GGTCCTTGTCCAGCTGCG 60.744 66.667 8.66 1.56 0.00 5.18
1248 1290 2.743928 CGGTCCTTGTCCAGCTGC 60.744 66.667 8.66 0.00 0.00 5.25
1283 1325 1.272490 CAGACTGCGGTTCTCCAGTAA 59.728 52.381 0.00 0.00 42.01 2.24
1403 1445 1.999634 ATCCTTCGGGCCATCCAAGG 62.000 60.000 4.39 9.95 41.29 3.61
1413 1455 1.064017 TCCCAATCCAAATCCTTCGGG 60.064 52.381 0.00 0.00 0.00 5.14
1415 1457 2.035066 GCATCCCAATCCAAATCCTTCG 59.965 50.000 0.00 0.00 0.00 3.79
1515 1557 4.639078 TTCATCCTCATTCACCTCAACA 57.361 40.909 0.00 0.00 0.00 3.33
1650 1692 3.817647 ACTGAACCAATGAGCTGTTCTTC 59.182 43.478 13.23 3.29 39.24 2.87
1656 1698 2.146342 ACGAACTGAACCAATGAGCTG 58.854 47.619 0.00 0.00 0.00 4.24
1670 1712 0.526662 CTTCTCGGTGGCTACGAACT 59.473 55.000 5.69 0.00 40.16 3.01
1763 1805 1.130777 AAATGCTGCAAAACCACCCT 58.869 45.000 6.36 0.00 0.00 4.34
1865 1907 2.158445 GCTCTCATCCCTGGTCTAGGTA 60.158 54.545 1.02 0.00 45.80 3.08
1976 2018 6.477053 TTTTGAGGTTGTTCATCAATTCCA 57.523 33.333 0.00 0.00 44.42 3.53
2297 2345 1.949525 GCTGCTTGACACTTTCCTCAA 59.050 47.619 0.00 0.00 0.00 3.02
2347 2395 7.891183 ACTGATCTTTTACACATGTGTCTAC 57.109 36.000 33.72 18.35 43.74 2.59
2441 2489 3.437741 TGCTGCATGTATGACAGAAGTTG 59.562 43.478 15.56 0.00 35.44 3.16
2649 2697 5.829391 TGGGACAACATTATTGATGATCTGG 59.171 40.000 2.34 0.00 39.15 3.86
2736 2784 0.976641 TATTGGCTAGGGATGCTCCG 59.023 55.000 0.00 0.00 37.43 4.63
2850 2898 7.709269 TGCTTCTTTACCTATTATGCTTACG 57.291 36.000 0.00 0.00 0.00 3.18
2942 2990 6.901265 TGCATGTTATATGTCATCAAATCCG 58.099 36.000 0.00 0.00 0.00 4.18
2969 3017 0.961019 TGGTTCTGGTTCTTGCATGC 59.039 50.000 11.82 11.82 0.00 4.06
3010 3058 6.529829 TGGTTCTTCGCATTTGCATAAATTAC 59.470 34.615 3.13 0.00 42.21 1.89
3547 3596 5.512942 TCATCAGGTAAACTTTCCATGGA 57.487 39.130 11.44 11.44 0.00 3.41
3554 3603 4.406456 TGGTGCATCATCAGGTAAACTTT 58.594 39.130 0.00 0.00 0.00 2.66
3667 3716 4.508662 AGTAACAGCTCTGCAAAGGATAC 58.491 43.478 0.00 0.00 0.00 2.24
3942 4142 3.423645 GCATTTCGTGAGAGTTACTGCAC 60.424 47.826 0.00 0.00 43.69 4.57
3954 4154 0.250684 TTCCCTGCAGCATTTCGTGA 60.251 50.000 8.66 0.00 0.00 4.35
3958 4158 1.615392 ACTTGTTCCCTGCAGCATTTC 59.385 47.619 8.66 0.00 0.00 2.17
4029 4229 3.054728 TCCGATCCAAAATAGGCTGTTCA 60.055 43.478 0.00 0.00 0.00 3.18
4035 4235 2.919228 ACAGTCCGATCCAAAATAGGC 58.081 47.619 0.00 0.00 0.00 3.93
4138 4339 2.628178 TGACTGAGTTGAAGGACGATGT 59.372 45.455 0.00 0.00 0.00 3.06
4553 4804 7.151976 AGTTGTGCATATTGGTTTTAGTTTCC 58.848 34.615 0.00 0.00 0.00 3.13
4683 4934 9.573166 TGATCTTTGACTCAATAAAAAGGAGAA 57.427 29.630 0.00 0.00 31.87 2.87
4697 4948 7.877097 ACAGCCATTCTATATGATCTTTGACTC 59.123 37.037 0.00 0.00 0.00 3.36
4719 4970 4.000325 TGTGTACATACCAATCACACAGC 59.000 43.478 0.00 0.00 43.22 4.40
4765 5016 8.137437 ACAATGATTTTCTGTAAAGGAAGTGTG 58.863 33.333 0.00 0.00 0.00 3.82
4766 5017 8.237811 ACAATGATTTTCTGTAAAGGAAGTGT 57.762 30.769 0.00 0.00 0.00 3.55
4815 5066 5.641209 CCTCTGAGTCTTTATTTGACACTGG 59.359 44.000 3.66 0.00 36.94 4.00
4936 5197 7.095144 CCAAGAAATTTGCTGCACATTAATTGA 60.095 33.333 24.92 1.71 0.00 2.57
5043 5310 0.329261 TCAACCCCCTTCATCAGCAG 59.671 55.000 0.00 0.00 0.00 4.24
5109 5377 4.227300 TGTAAAATACTGGAGCACCATCCT 59.773 41.667 2.38 0.00 45.87 3.24
5218 5487 6.811253 TGGACAACATGGTTCAAAGTATAC 57.189 37.500 0.00 0.00 0.00 1.47
5438 5710 9.132521 CAGATAAAAAGAGCAAGGTTGTAATTG 57.867 33.333 0.00 0.00 0.00 2.32
5513 5785 7.092710 CAAGGATTGTACAAAAATGTTCACG 57.907 36.000 13.23 0.00 42.34 4.35
5535 5807 3.671008 ACAGTATCTGTAACCGCACAA 57.329 42.857 0.27 0.00 43.46 3.33
5536 5808 3.671008 AACAGTATCTGTAACCGCACA 57.329 42.857 2.80 0.00 44.62 4.57
5537 5809 4.925054 TGTTAACAGTATCTGTAACCGCAC 59.075 41.667 3.59 0.00 44.62 5.34
5538 5810 4.925054 GTGTTAACAGTATCTGTAACCGCA 59.075 41.667 8.98 0.00 44.62 5.69
5539 5811 4.925054 TGTGTTAACAGTATCTGTAACCGC 59.075 41.667 8.98 0.00 44.62 5.68
5540 5812 6.809689 TGATGTGTTAACAGTATCTGTAACCG 59.190 38.462 23.09 0.00 44.62 4.44
5541 5813 7.201530 GCTGATGTGTTAACAGTATCTGTAACC 60.202 40.741 24.60 13.97 44.62 2.85
5542 5814 7.462856 CGCTGATGTGTTAACAGTATCTGTAAC 60.463 40.741 24.60 15.46 44.62 2.50
5543 5815 6.530181 CGCTGATGTGTTAACAGTATCTGTAA 59.470 38.462 24.60 12.00 44.62 2.41
5544 5816 6.033966 CGCTGATGTGTTAACAGTATCTGTA 58.966 40.000 24.60 12.22 44.62 2.74
5545 5817 5.566826 ACGCTGATGTGTTAACAGTATCTGT 60.567 40.000 24.60 19.16 38.99 3.41
5546 5818 4.864806 ACGCTGATGTGTTAACAGTATCTG 59.135 41.667 23.09 22.67 40.39 2.90
5547 5819 5.073311 ACGCTGATGTGTTAACAGTATCT 57.927 39.130 23.09 9.05 40.39 1.98
5548 5820 7.337718 CAATACGCTGATGTGTTAACAGTATC 58.662 38.462 18.97 18.97 40.39 2.24
5549 5821 6.238103 GCAATACGCTGATGTGTTAACAGTAT 60.238 38.462 8.98 8.37 37.41 2.12
5550 5822 5.062934 GCAATACGCTGATGTGTTAACAGTA 59.937 40.000 8.98 6.32 37.41 2.74
5551 5823 4.142902 GCAATACGCTGATGTGTTAACAGT 60.143 41.667 8.98 4.13 37.41 3.55
5552 5824 4.334443 GCAATACGCTGATGTGTTAACAG 58.666 43.478 8.98 0.00 37.41 3.16
5553 5825 3.126171 GGCAATACGCTGATGTGTTAACA 59.874 43.478 3.59 3.59 41.91 2.41
5554 5826 3.126171 TGGCAATACGCTGATGTGTTAAC 59.874 43.478 0.00 0.00 41.91 2.01
5555 5827 3.339141 TGGCAATACGCTGATGTGTTAA 58.661 40.909 0.00 0.00 41.91 2.01
5556 5828 2.979240 TGGCAATACGCTGATGTGTTA 58.021 42.857 0.00 0.00 41.91 2.41
5557 5829 1.819928 TGGCAATACGCTGATGTGTT 58.180 45.000 0.00 0.00 41.91 3.32
5558 5830 2.042686 ATGGCAATACGCTGATGTGT 57.957 45.000 0.00 0.00 41.91 3.72
5559 5831 4.282068 GTTTATGGCAATACGCTGATGTG 58.718 43.478 0.00 0.00 41.91 3.21
5560 5832 3.315191 GGTTTATGGCAATACGCTGATGT 59.685 43.478 0.00 0.00 41.91 3.06
5561 5833 3.314913 TGGTTTATGGCAATACGCTGATG 59.685 43.478 0.00 0.00 41.91 3.07
5617 5889 7.609056 TGATCCACTAACAGGACTAAGTTTAC 58.391 38.462 0.00 0.00 38.13 2.01
5638 6052 4.209452 TGTCAAGTTTGCGAGTTTGATC 57.791 40.909 5.74 0.00 32.76 2.92
5643 6057 1.378531 TGCTGTCAAGTTTGCGAGTT 58.621 45.000 0.00 0.00 0.00 3.01
5647 6061 6.257423 TGAAATATATGCTGTCAAGTTTGCG 58.743 36.000 0.00 0.00 0.00 4.85
5795 6211 0.095935 CACTGTAATGCGCTGACTGC 59.904 55.000 9.73 0.00 38.57 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.