Multiple sequence alignment - TraesCS7A01G329200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G329200 chr7A 100.000 3174 0 0 1 3174 478584785 478587958 0.000000e+00 5862.0
1 TraesCS7A01G329200 chr7D 93.511 1649 65 23 551 2175 416273135 416274765 0.000000e+00 2414.0
2 TraesCS7A01G329200 chr7D 90.330 424 29 7 2683 3102 416275644 416276059 2.150000e-151 545.0
3 TraesCS7A01G329200 chr7D 89.231 390 33 3 1790 2178 416276306 416276687 2.210000e-131 479.0
4 TraesCS7A01G329200 chr7D 87.848 395 45 3 1785 2179 416333183 416333574 8.020000e-126 460.0
5 TraesCS7A01G329200 chr7D 84.189 487 46 15 2619 3100 416332472 416332932 8.080000e-121 444.0
6 TraesCS7A01G329200 chr7D 88.362 232 18 5 2389 2616 416276771 416276997 1.450000e-68 270.0
7 TraesCS7A01G329200 chr7D 87.391 230 24 5 2389 2616 416275141 416275367 3.140000e-65 259.0
8 TraesCS7A01G329200 chr7D 88.608 158 11 4 332 488 416272879 416273030 5.410000e-43 185.0
9 TraesCS7A01G329200 chr7D 89.552 134 14 0 2398 2531 416332194 416332327 1.510000e-38 171.0
10 TraesCS7A01G329200 chr7D 82.126 207 12 6 94 294 416272615 416272802 1.520000e-33 154.0
11 TraesCS7A01G329200 chr7D 88.571 105 10 2 2680 2783 416276776 416276879 3.320000e-25 126.0
12 TraesCS7A01G329200 chr7D 87.671 73 9 0 3102 3174 408122802 408122730 5.640000e-13 86.1
13 TraesCS7A01G329200 chr7B 93.002 1672 70 19 538 2183 431690216 431691866 0.000000e+00 2396.0
14 TraesCS7A01G329200 chr7B 85.676 747 58 16 2389 3102 431691938 431692668 0.000000e+00 741.0
15 TraesCS7A01G329200 chr7B 86.039 308 41 2 1785 2092 431838555 431838860 2.360000e-86 329.0
16 TraesCS7A01G329200 chr7B 91.667 144 7 3 339 481 431689988 431690127 8.980000e-46 195.0
17 TraesCS7A01G329200 chr7B 87.736 106 11 2 2680 2784 431691943 431692047 4.300000e-24 122.0
18 TraesCS7A01G329200 chr7B 92.500 80 4 2 1791 1869 431692916 431692994 2.590000e-21 113.0
19 TraesCS7A01G329200 chr3B 90.909 110 4 4 2226 2329 119291857 119291966 3.300000e-30 143.0
20 TraesCS7A01G329200 chr3B 90.000 110 5 4 2226 2329 119287283 119287392 1.540000e-28 137.0
21 TraesCS7A01G329200 chr3B 89.189 74 7 1 3102 3174 489286836 489286909 1.210000e-14 91.6
22 TraesCS7A01G329200 chr3B 87.838 74 8 1 3102 3174 250093906 250093979 5.640000e-13 86.1
23 TraesCS7A01G329200 chr6D 90.654 107 4 4 2229 2329 72144455 72144349 1.540000e-28 137.0
24 TraesCS7A01G329200 chr6D 90.654 107 4 4 2229 2329 72170595 72170489 1.540000e-28 137.0
25 TraesCS7A01G329200 chr6D 80.198 101 18 2 1719 1817 308330482 308330382 1.220000e-09 75.0
26 TraesCS7A01G329200 chr4A 89.815 108 5 4 2229 2330 626783217 626783110 1.990000e-27 134.0
27 TraesCS7A01G329200 chr4A 89.720 107 5 4 2229 2329 626841188 626841082 7.140000e-27 132.0
28 TraesCS7A01G329200 chr2A 88.679 106 7 3 2229 2329 757536719 757536614 1.200000e-24 124.0
29 TraesCS7A01G329200 chr2A 95.238 42 2 0 1765 1806 570608626 570608667 2.040000e-07 67.6
30 TraesCS7A01G329200 chr4B 90.278 72 6 1 3104 3174 135304013 135304084 3.370000e-15 93.5
31 TraesCS7A01G329200 chr1A 89.189 74 7 1 3102 3174 311892826 311892753 1.210000e-14 91.6
32 TraesCS7A01G329200 chr6B 88.158 76 6 3 3101 3174 153478859 153478785 1.570000e-13 87.9
33 TraesCS7A01G329200 chr4D 86.420 81 10 1 3095 3174 57886008 57886088 1.570000e-13 87.9
34 TraesCS7A01G329200 chr2D 87.838 74 8 1 3102 3174 540612743 540612816 5.640000e-13 86.1
35 TraesCS7A01G329200 chr2B 87.838 74 8 1 3102 3174 777741331 777741258 5.640000e-13 86.1
36 TraesCS7A01G329200 chr5D 76.398 161 24 11 1586 1739 9103286 9103439 1.220000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G329200 chr7A 478584785 478587958 3173 False 5862.000000 5862 100.000000 1 3174 1 chr7A.!!$F1 3173
1 TraesCS7A01G329200 chr7D 416272615 416276997 4382 False 554.000000 2414 88.516250 94 3102 8 chr7D.!!$F1 3008
2 TraesCS7A01G329200 chr7D 416332194 416333574 1380 False 358.333333 460 87.196333 1785 3100 3 chr7D.!!$F2 1315
3 TraesCS7A01G329200 chr7B 431689988 431692994 3006 False 713.400000 2396 90.116200 339 3102 5 chr7B.!!$F2 2763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 588 0.036577 GCGGATGATGGATGAGGGAG 60.037 60.0 0.0 0.0 0.0 4.30 F
771 880 0.165944 CAACGCCTCCTAAAAGCACG 59.834 55.0 0.0 0.0 0.0 5.34 F
938 1060 0.539051 CATCACCGGCTTCTTCTCCT 59.461 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1433 1572 0.261991 TTGGGGAGGAGCTCGTAGAT 59.738 55.0 9.29 0.0 33.89 1.98 R
1939 2078 0.464013 CAGCCTCCTCCTCATTGCAG 60.464 60.0 0.00 0.0 0.00 4.41 R
2287 2427 0.740149 TGATTTATGCGCAGGCCTTG 59.260 50.0 18.32 0.0 38.85 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.335316 AACTGCGTTGTTAGGTGGAA 57.665 45.000 0.00 0.00 0.00 3.53
21 22 2.561478 ACTGCGTTGTTAGGTGGAAT 57.439 45.000 0.00 0.00 0.00 3.01
22 23 2.151202 ACTGCGTTGTTAGGTGGAATG 58.849 47.619 0.00 0.00 0.00 2.67
23 24 2.224426 ACTGCGTTGTTAGGTGGAATGA 60.224 45.455 0.00 0.00 0.00 2.57
24 25 2.811431 CTGCGTTGTTAGGTGGAATGAA 59.189 45.455 0.00 0.00 0.00 2.57
25 26 2.811431 TGCGTTGTTAGGTGGAATGAAG 59.189 45.455 0.00 0.00 0.00 3.02
26 27 2.161609 GCGTTGTTAGGTGGAATGAAGG 59.838 50.000 0.00 0.00 0.00 3.46
27 28 2.161609 CGTTGTTAGGTGGAATGAAGGC 59.838 50.000 0.00 0.00 0.00 4.35
28 29 3.153919 GTTGTTAGGTGGAATGAAGGCA 58.846 45.455 0.00 0.00 0.00 4.75
29 30 3.737559 TGTTAGGTGGAATGAAGGCAT 57.262 42.857 0.00 0.00 35.92 4.40
30 31 3.355378 TGTTAGGTGGAATGAAGGCATG 58.645 45.455 0.00 0.00 34.26 4.06
31 32 2.057137 TAGGTGGAATGAAGGCATGC 57.943 50.000 9.90 9.90 34.26 4.06
35 36 2.121645 GGAATGAAGGCATGCCTGG 58.878 57.895 39.18 0.00 45.55 4.45
36 37 2.024590 GGAATGAAGGCATGCCTGGC 62.025 60.000 39.18 31.26 45.55 4.85
42 43 4.489771 GGCATGCCTGGCTACGGT 62.490 66.667 29.98 0.00 44.27 4.83
43 44 3.204827 GCATGCCTGGCTACGGTG 61.205 66.667 21.03 11.41 0.00 4.94
44 45 2.514592 CATGCCTGGCTACGGTGG 60.515 66.667 21.03 0.00 0.00 4.61
45 46 4.489771 ATGCCTGGCTACGGTGGC 62.490 66.667 21.03 8.09 45.10 5.01
47 48 4.715523 GCCTGGCTACGGTGGCAA 62.716 66.667 18.37 6.06 44.34 4.52
48 49 2.033448 CCTGGCTACGGTGGCAAA 59.967 61.111 18.37 4.98 41.92 3.68
49 50 2.040544 CCTGGCTACGGTGGCAAAG 61.041 63.158 18.37 13.81 41.92 2.77
50 51 1.003839 CTGGCTACGGTGGCAAAGA 60.004 57.895 18.37 0.00 41.92 2.52
51 52 1.298859 CTGGCTACGGTGGCAAAGAC 61.299 60.000 18.37 0.93 41.92 3.01
52 53 2.038837 GGCTACGGTGGCAAAGACC 61.039 63.158 18.37 0.00 0.00 3.85
53 54 1.003718 GCTACGGTGGCAAAGACCT 60.004 57.895 11.90 0.00 0.00 3.85
54 55 1.019805 GCTACGGTGGCAAAGACCTC 61.020 60.000 11.90 0.00 0.00 3.85
55 56 0.608640 CTACGGTGGCAAAGACCTCT 59.391 55.000 0.00 0.00 0.00 3.69
56 57 1.822990 CTACGGTGGCAAAGACCTCTA 59.177 52.381 0.00 0.00 0.00 2.43
57 58 0.320697 ACGGTGGCAAAGACCTCTAC 59.679 55.000 0.00 0.00 0.00 2.59
58 59 0.608640 CGGTGGCAAAGACCTCTACT 59.391 55.000 0.00 0.00 0.00 2.57
59 60 1.822990 CGGTGGCAAAGACCTCTACTA 59.177 52.381 0.00 0.00 0.00 1.82
60 61 2.416972 CGGTGGCAAAGACCTCTACTAC 60.417 54.545 0.00 0.00 0.00 2.73
61 62 2.832733 GGTGGCAAAGACCTCTACTACT 59.167 50.000 0.00 0.00 0.00 2.57
62 63 4.021916 GGTGGCAAAGACCTCTACTACTA 58.978 47.826 0.00 0.00 0.00 1.82
63 64 4.098196 GGTGGCAAAGACCTCTACTACTAG 59.902 50.000 0.00 0.00 0.00 2.57
64 65 4.705991 GTGGCAAAGACCTCTACTACTAGT 59.294 45.833 0.00 0.00 0.00 2.57
65 66 5.884792 GTGGCAAAGACCTCTACTACTAGTA 59.115 44.000 1.89 1.89 0.00 1.82
67 68 6.121590 GGCAAAGACCTCTACTACTAGTAGT 58.878 44.000 32.39 32.39 46.31 2.73
68 69 6.038492 GGCAAAGACCTCTACTACTAGTAGTG 59.962 46.154 35.52 26.39 46.31 2.74
69 70 6.598850 GCAAAGACCTCTACTACTAGTAGTGT 59.401 42.308 35.52 26.95 46.31 3.55
70 71 7.201635 GCAAAGACCTCTACTACTAGTAGTGTC 60.202 44.444 35.52 31.21 46.31 3.67
71 72 6.147864 AGACCTCTACTACTAGTAGTGTCG 57.852 45.833 35.52 25.20 46.31 4.35
72 73 5.890985 AGACCTCTACTACTAGTAGTGTCGA 59.109 44.000 35.52 27.14 46.31 4.20
73 74 6.550854 AGACCTCTACTACTAGTAGTGTCGAT 59.449 42.308 35.52 22.13 46.31 3.59
74 75 6.514947 ACCTCTACTACTAGTAGTGTCGATG 58.485 44.000 35.52 26.32 46.31 3.84
75 76 6.323482 ACCTCTACTACTAGTAGTGTCGATGA 59.677 42.308 35.52 23.10 46.31 2.92
76 77 7.147759 ACCTCTACTACTAGTAGTGTCGATGAA 60.148 40.741 35.52 18.19 46.31 2.57
77 78 7.383029 CCTCTACTACTAGTAGTGTCGATGAAG 59.617 44.444 35.52 24.72 46.31 3.02
78 79 7.780064 TCTACTACTAGTAGTGTCGATGAAGT 58.220 38.462 35.52 16.33 46.31 3.01
79 80 8.256605 TCTACTACTAGTAGTGTCGATGAAGTT 58.743 37.037 35.52 13.90 46.31 2.66
80 81 7.306205 ACTACTAGTAGTGTCGATGAAGTTC 57.694 40.000 30.33 0.00 44.11 3.01
81 82 7.104939 ACTACTAGTAGTGTCGATGAAGTTCT 58.895 38.462 30.33 4.02 44.11 3.01
82 83 6.821031 ACTAGTAGTGTCGATGAAGTTCTT 57.179 37.500 0.85 0.00 0.00 2.52
83 84 7.216973 ACTAGTAGTGTCGATGAAGTTCTTT 57.783 36.000 0.85 0.00 0.00 2.52
84 85 7.085116 ACTAGTAGTGTCGATGAAGTTCTTTG 58.915 38.462 0.85 2.08 0.00 2.77
85 86 5.844004 AGTAGTGTCGATGAAGTTCTTTGT 58.156 37.500 4.17 0.00 0.00 2.83
86 87 5.692204 AGTAGTGTCGATGAAGTTCTTTGTG 59.308 40.000 4.17 0.00 0.00 3.33
87 88 4.693283 AGTGTCGATGAAGTTCTTTGTGA 58.307 39.130 4.17 0.00 0.00 3.58
88 89 5.300752 AGTGTCGATGAAGTTCTTTGTGAT 58.699 37.500 4.17 0.00 0.00 3.06
89 90 5.178252 AGTGTCGATGAAGTTCTTTGTGATG 59.822 40.000 4.17 0.00 0.00 3.07
90 91 4.452114 TGTCGATGAAGTTCTTTGTGATGG 59.548 41.667 4.17 0.00 0.00 3.51
91 92 4.002982 TCGATGAAGTTCTTTGTGATGGG 58.997 43.478 4.17 0.00 0.00 4.00
92 93 3.127548 CGATGAAGTTCTTTGTGATGGGG 59.872 47.826 4.17 0.00 0.00 4.96
107 108 1.236869 GGGGATGGGGATGGCAATT 59.763 57.895 0.00 0.00 0.00 2.32
110 111 0.105555 GGATGGGGATGGCAATTGGA 60.106 55.000 7.72 0.00 0.00 3.53
115 116 1.133199 GGGGATGGCAATTGGATACCA 60.133 52.381 7.72 6.28 36.43 3.25
119 120 3.508793 GGATGGCAATTGGATACCAGATG 59.491 47.826 7.72 0.00 35.20 2.90
141 142 0.697658 TGGTGGATGTTGCTCCATGA 59.302 50.000 0.00 0.00 46.67 3.07
142 143 1.098050 GGTGGATGTTGCTCCATGAC 58.902 55.000 0.00 0.00 46.67 3.06
143 144 1.340405 GGTGGATGTTGCTCCATGACT 60.340 52.381 0.00 0.00 46.67 3.41
144 145 1.741706 GTGGATGTTGCTCCATGACTG 59.258 52.381 0.00 0.00 46.67 3.51
145 146 1.629861 TGGATGTTGCTCCATGACTGA 59.370 47.619 0.00 0.00 40.43 3.41
146 147 2.012673 GGATGTTGCTCCATGACTGAC 58.987 52.381 0.00 0.00 35.24 3.51
147 148 1.662629 GATGTTGCTCCATGACTGACG 59.337 52.381 0.00 0.00 0.00 4.35
148 149 0.320683 TGTTGCTCCATGACTGACGG 60.321 55.000 0.00 0.00 0.00 4.79
149 150 0.320771 GTTGCTCCATGACTGACGGT 60.321 55.000 0.00 0.00 0.00 4.83
150 151 0.396435 TTGCTCCATGACTGACGGTT 59.604 50.000 0.00 0.00 0.00 4.44
151 152 0.037326 TGCTCCATGACTGACGGTTC 60.037 55.000 0.00 0.00 0.00 3.62
152 153 0.037326 GCTCCATGACTGACGGTTCA 60.037 55.000 0.00 0.00 0.00 3.18
153 154 1.608025 GCTCCATGACTGACGGTTCAA 60.608 52.381 0.00 0.00 0.00 2.69
154 155 2.069273 CTCCATGACTGACGGTTCAAC 58.931 52.381 0.00 0.00 0.00 3.18
215 216 7.819900 GGTTCAACCTATATCAATGCTAGGTAG 59.180 40.741 0.00 0.00 43.45 3.18
216 217 8.368668 GTTCAACCTATATCAATGCTAGGTAGT 58.631 37.037 8.65 0.00 43.45 2.73
217 218 9.596308 TTCAACCTATATCAATGCTAGGTAGTA 57.404 33.333 8.65 0.00 43.45 1.82
221 228 9.683870 ACCTATATCAATGCTAGGTAGTAGTAC 57.316 37.037 7.07 0.00 42.65 2.73
246 253 5.431765 ACGGAAGTCTAGCAATGATGAAAT 58.568 37.500 0.00 0.00 44.19 2.17
285 292 1.946768 TGAGCACTGGTGTAAAGCAAC 59.053 47.619 2.64 0.00 34.76 4.17
286 293 1.266989 GAGCACTGGTGTAAAGCAACC 59.733 52.381 2.64 0.00 32.70 3.77
295 327 1.202952 TGTAAAGCAACCGAATGGGGT 60.203 47.619 0.00 0.00 43.83 4.95
325 357 7.179076 ACCAAATACTAGGTGGTACAAGTAG 57.821 40.000 7.63 0.00 43.90 2.57
327 359 7.093596 ACCAAATACTAGGTGGTACAAGTAGTC 60.094 40.741 7.63 0.00 43.90 2.59
328 360 6.690194 AATACTAGGTGGTACAAGTAGTCG 57.310 41.667 0.00 0.00 44.16 4.18
329 361 4.026356 ACTAGGTGGTACAAGTAGTCGT 57.974 45.455 0.00 0.00 44.16 4.34
330 362 3.755378 ACTAGGTGGTACAAGTAGTCGTG 59.245 47.826 0.00 0.00 44.16 4.35
331 363 2.590821 AGGTGGTACAAGTAGTCGTGT 58.409 47.619 0.00 0.00 44.16 4.49
332 364 2.555757 AGGTGGTACAAGTAGTCGTGTC 59.444 50.000 0.00 0.00 44.16 3.67
333 365 2.578495 GTGGTACAAGTAGTCGTGTCG 58.422 52.381 0.00 0.00 44.16 4.35
334 366 2.031682 GTGGTACAAGTAGTCGTGTCGT 60.032 50.000 0.00 0.00 44.16 4.34
337 384 2.396160 ACAAGTAGTCGTGTCGTGTC 57.604 50.000 0.00 0.00 31.17 3.67
377 424 6.653320 TGTGAATAATCCTAAGAAAACGTGCT 59.347 34.615 0.00 0.00 0.00 4.40
397 444 3.238788 TGGTGGTCAACAGAGACTAGA 57.761 47.619 0.00 0.00 38.57 2.43
399 446 3.321111 TGGTGGTCAACAGAGACTAGAAC 59.679 47.826 0.00 0.00 38.57 3.01
400 447 3.321111 GGTGGTCAACAGAGACTAGAACA 59.679 47.826 0.00 0.00 38.57 3.18
404 451 6.483640 GTGGTCAACAGAGACTAGAACAAAAT 59.516 38.462 0.00 0.00 38.57 1.82
405 452 7.656137 GTGGTCAACAGAGACTAGAACAAAATA 59.344 37.037 0.00 0.00 38.57 1.40
406 453 8.375506 TGGTCAACAGAGACTAGAACAAAATAT 58.624 33.333 0.00 0.00 38.57 1.28
407 454 8.874816 GGTCAACAGAGACTAGAACAAAATATC 58.125 37.037 0.00 0.00 38.57 1.63
408 455 8.587950 GTCAACAGAGACTAGAACAAAATATCG 58.412 37.037 0.00 0.00 35.65 2.92
409 456 8.304596 TCAACAGAGACTAGAACAAAATATCGT 58.695 33.333 0.00 0.00 0.00 3.73
410 457 8.926710 CAACAGAGACTAGAACAAAATATCGTT 58.073 33.333 0.00 0.00 0.00 3.85
418 465 9.570488 ACTAGAACAAAATATCGTTAGTGAGAC 57.430 33.333 0.00 0.00 0.00 3.36
488 545 5.163045 GGGTTTAGATGGATGAGGGAGATTT 60.163 44.000 0.00 0.00 0.00 2.17
489 546 6.368805 GGTTTAGATGGATGAGGGAGATTTT 58.631 40.000 0.00 0.00 0.00 1.82
490 547 6.836007 GGTTTAGATGGATGAGGGAGATTTTT 59.164 38.462 0.00 0.00 0.00 1.94
524 581 4.533919 TTTGTTTTTGCGGATGATGGAT 57.466 36.364 0.00 0.00 0.00 3.41
525 582 3.507103 TGTTTTTGCGGATGATGGATG 57.493 42.857 0.00 0.00 0.00 3.51
527 584 3.129113 TGTTTTTGCGGATGATGGATGAG 59.871 43.478 0.00 0.00 0.00 2.90
528 585 1.971481 TTTGCGGATGATGGATGAGG 58.029 50.000 0.00 0.00 0.00 3.86
529 586 0.109153 TTGCGGATGATGGATGAGGG 59.891 55.000 0.00 0.00 0.00 4.30
530 587 0.763986 TGCGGATGATGGATGAGGGA 60.764 55.000 0.00 0.00 0.00 4.20
531 588 0.036577 GCGGATGATGGATGAGGGAG 60.037 60.000 0.00 0.00 0.00 4.30
533 590 2.186243 CGGATGATGGATGAGGGAGAT 58.814 52.381 0.00 0.00 0.00 2.75
534 591 2.570752 CGGATGATGGATGAGGGAGATT 59.429 50.000 0.00 0.00 0.00 2.40
535 592 3.619242 CGGATGATGGATGAGGGAGATTG 60.619 52.174 0.00 0.00 0.00 2.67
536 593 3.308259 GGATGATGGATGAGGGAGATTGG 60.308 52.174 0.00 0.00 0.00 3.16
537 594 3.064773 TGATGGATGAGGGAGATTGGA 57.935 47.619 0.00 0.00 0.00 3.53
538 595 2.977580 TGATGGATGAGGGAGATTGGAG 59.022 50.000 0.00 0.00 0.00 3.86
539 596 2.575921 TGGATGAGGGAGATTGGAGT 57.424 50.000 0.00 0.00 0.00 3.85
540 597 2.121948 TGGATGAGGGAGATTGGAGTG 58.878 52.381 0.00 0.00 0.00 3.51
541 598 1.419387 GGATGAGGGAGATTGGAGTGG 59.581 57.143 0.00 0.00 0.00 4.00
542 599 2.402564 GATGAGGGAGATTGGAGTGGA 58.597 52.381 0.00 0.00 0.00 4.02
543 600 1.573108 TGAGGGAGATTGGAGTGGAC 58.427 55.000 0.00 0.00 0.00 4.02
547 625 1.153349 GAGATTGGAGTGGACCGGC 60.153 63.158 0.00 0.00 0.00 6.13
645 750 4.338118 GTCGGCCATCTGAAATGGAAATTA 59.662 41.667 2.24 0.00 41.64 1.40
651 756 4.963276 TCTGAAATGGAAATTACCTGCG 57.037 40.909 0.00 0.00 0.00 5.18
687 792 3.565482 CGCCACCATTTAATCTAGTGCAT 59.435 43.478 0.00 0.00 0.00 3.96
688 793 4.754618 CGCCACCATTTAATCTAGTGCATA 59.245 41.667 0.00 0.00 0.00 3.14
689 794 5.412594 CGCCACCATTTAATCTAGTGCATAT 59.587 40.000 0.00 0.00 0.00 1.78
690 795 6.593770 CGCCACCATTTAATCTAGTGCATATA 59.406 38.462 0.00 0.00 0.00 0.86
768 877 1.235724 ACACAACGCCTCCTAAAAGC 58.764 50.000 0.00 0.00 0.00 3.51
769 878 1.234821 CACAACGCCTCCTAAAAGCA 58.765 50.000 0.00 0.00 0.00 3.91
771 880 0.165944 CAACGCCTCCTAAAAGCACG 59.834 55.000 0.00 0.00 0.00 5.34
774 883 1.377333 GCCTCCTAAAAGCACGCCT 60.377 57.895 0.00 0.00 0.00 5.52
796 905 2.766828 AGTCCTAGCTAGGCGTCATTTT 59.233 45.455 31.76 9.89 43.31 1.82
813 922 3.644884 TTTTCTGTCACTCTCCGTCTC 57.355 47.619 0.00 0.00 0.00 3.36
814 923 1.157585 TTCTGTCACTCTCCGTCTCG 58.842 55.000 0.00 0.00 0.00 4.04
898 1017 5.697826 CAATTCAACCAGCTTCTTCTTCTC 58.302 41.667 0.00 0.00 0.00 2.87
903 1022 1.134848 CCAGCTTCTTCTTCTCCTCCG 60.135 57.143 0.00 0.00 0.00 4.63
918 1037 0.805614 CTCCGTGTCTGATCACTCGT 59.194 55.000 0.00 0.00 36.33 4.18
938 1060 0.539051 CATCACCGGCTTCTTCTCCT 59.461 55.000 0.00 0.00 0.00 3.69
939 1061 0.827368 ATCACCGGCTTCTTCTCCTC 59.173 55.000 0.00 0.00 0.00 3.71
940 1062 1.219393 CACCGGCTTCTTCTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
941 1063 1.229209 ACCGGCTTCTTCTCCTCCA 60.229 57.895 0.00 0.00 0.00 3.86
942 1064 0.618968 ACCGGCTTCTTCTCCTCCAT 60.619 55.000 0.00 0.00 0.00 3.41
943 1065 1.343075 ACCGGCTTCTTCTCCTCCATA 60.343 52.381 0.00 0.00 0.00 2.74
944 1066 1.069358 CCGGCTTCTTCTCCTCCATAC 59.931 57.143 0.00 0.00 0.00 2.39
947 1069 2.103941 GGCTTCTTCTCCTCCATACAGG 59.896 54.545 0.00 0.00 39.47 4.00
948 1070 3.034635 GCTTCTTCTCCTCCATACAGGA 58.965 50.000 0.00 0.00 46.75 3.86
979 1118 0.678395 ACTCTCTCTGGTGCTGTGTG 59.322 55.000 0.00 0.00 0.00 3.82
981 1120 1.889170 CTCTCTCTGGTGCTGTGTGTA 59.111 52.381 0.00 0.00 0.00 2.90
982 1121 2.495270 CTCTCTCTGGTGCTGTGTGTAT 59.505 50.000 0.00 0.00 0.00 2.29
989 1128 6.323739 TCTCTGGTGCTGTGTGTATTATATGA 59.676 38.462 0.00 0.00 0.00 2.15
1039 1178 1.291877 CTTCCGCGTCTCCAACAAGG 61.292 60.000 4.92 0.00 39.47 3.61
1078 1217 1.776662 TCTCTACTCCCGTTCCATGG 58.223 55.000 4.97 4.97 0.00 3.66
1108 1247 3.221771 CAACAGTTTCCCATTCCTCACA 58.778 45.455 0.00 0.00 0.00 3.58
1124 1263 4.641541 TCCTCACATTACTTGCCATTCATG 59.358 41.667 0.00 0.00 0.00 3.07
1383 1522 2.669569 CAACGTGGAGCACCCCAG 60.670 66.667 0.00 0.00 36.78 4.45
1449 1588 1.243902 CTCATCTACGAGCTCCTCCC 58.756 60.000 8.47 0.00 0.00 4.30
1507 1646 2.284995 GACCCCTCCAGGCTCACT 60.285 66.667 0.00 0.00 0.00 3.41
1576 1715 2.580815 CTGCACGAGGAGATGGCA 59.419 61.111 0.00 0.00 34.74 4.92
1897 2036 2.829003 TGGGAGCTCTACGAGGCG 60.829 66.667 14.64 0.00 0.00 5.52
2115 2254 0.324943 CTCCGGGACAACAAGGACAT 59.675 55.000 0.00 0.00 0.00 3.06
2125 2264 0.321671 ACAAGGACATCCACTCCACG 59.678 55.000 0.00 0.00 38.89 4.94
2150 2289 3.334751 TCGTTGCTTCGCACACCG 61.335 61.111 0.00 0.00 38.71 4.94
2175 2315 1.653151 GAGGTAGCGCCAAGGTAAAG 58.347 55.000 2.29 0.00 40.61 1.85
2176 2316 1.206371 GAGGTAGCGCCAAGGTAAAGA 59.794 52.381 2.29 0.00 40.61 2.52
2177 2317 1.626825 AGGTAGCGCCAAGGTAAAGAA 59.373 47.619 2.29 0.00 40.61 2.52
2178 2318 2.007608 GGTAGCGCCAAGGTAAAGAAG 58.992 52.381 2.29 0.00 37.17 2.85
2179 2319 2.614734 GGTAGCGCCAAGGTAAAGAAGT 60.615 50.000 2.29 0.00 37.17 3.01
2180 2320 1.523758 AGCGCCAAGGTAAAGAAGTG 58.476 50.000 2.29 0.00 0.00 3.16
2181 2321 1.202770 AGCGCCAAGGTAAAGAAGTGT 60.203 47.619 2.29 0.00 0.00 3.55
2182 2322 1.607148 GCGCCAAGGTAAAGAAGTGTT 59.393 47.619 0.00 0.00 0.00 3.32
2183 2323 2.809696 GCGCCAAGGTAAAGAAGTGTTA 59.190 45.455 0.00 0.00 0.00 2.41
2184 2324 3.251487 GCGCCAAGGTAAAGAAGTGTTAA 59.749 43.478 0.00 0.00 0.00 2.01
2185 2325 4.261280 GCGCCAAGGTAAAGAAGTGTTAAA 60.261 41.667 0.00 0.00 0.00 1.52
2186 2326 5.209977 CGCCAAGGTAAAGAAGTGTTAAAC 58.790 41.667 0.00 0.00 0.00 2.01
2187 2327 5.209977 GCCAAGGTAAAGAAGTGTTAAACG 58.790 41.667 0.00 0.00 0.00 3.60
2188 2328 5.007921 GCCAAGGTAAAGAAGTGTTAAACGA 59.992 40.000 0.00 0.00 0.00 3.85
2189 2329 6.656003 CCAAGGTAAAGAAGTGTTAAACGAG 58.344 40.000 0.00 0.00 0.00 4.18
2190 2330 6.259387 CCAAGGTAAAGAAGTGTTAAACGAGT 59.741 38.462 0.00 0.00 0.00 4.18
2191 2331 7.342942 CAAGGTAAAGAAGTGTTAAACGAGTC 58.657 38.462 0.00 0.00 0.00 3.36
2192 2332 6.814043 AGGTAAAGAAGTGTTAAACGAGTCT 58.186 36.000 0.00 0.00 0.00 3.24
2193 2333 7.945134 AGGTAAAGAAGTGTTAAACGAGTCTA 58.055 34.615 0.00 0.00 0.00 2.59
2194 2334 8.583296 AGGTAAAGAAGTGTTAAACGAGTCTAT 58.417 33.333 0.00 0.00 0.00 1.98
2195 2335 9.846248 GGTAAAGAAGTGTTAAACGAGTCTATA 57.154 33.333 0.00 0.00 0.00 1.31
2197 2337 8.463456 AAAGAAGTGTTAAACGAGTCTATAGC 57.537 34.615 0.00 0.00 0.00 2.97
2198 2338 6.562518 AGAAGTGTTAAACGAGTCTATAGCC 58.437 40.000 0.00 0.00 0.00 3.93
2199 2339 6.377712 AGAAGTGTTAAACGAGTCTATAGCCT 59.622 38.462 0.00 0.00 0.00 4.58
2200 2340 7.555554 AGAAGTGTTAAACGAGTCTATAGCCTA 59.444 37.037 0.00 0.00 0.00 3.93
2201 2341 7.261829 AGTGTTAAACGAGTCTATAGCCTAG 57.738 40.000 0.00 0.00 0.00 3.02
2202 2342 5.914074 GTGTTAAACGAGTCTATAGCCTAGC 59.086 44.000 0.00 0.00 0.00 3.42
2203 2343 5.009410 TGTTAAACGAGTCTATAGCCTAGCC 59.991 44.000 0.00 0.00 0.00 3.93
2204 2344 2.203470 ACGAGTCTATAGCCTAGCCC 57.797 55.000 0.00 0.00 0.00 5.19
2205 2345 1.706305 ACGAGTCTATAGCCTAGCCCT 59.294 52.381 0.00 0.00 0.00 5.19
2206 2346 2.911636 ACGAGTCTATAGCCTAGCCCTA 59.088 50.000 0.00 0.00 0.00 3.53
2207 2347 3.054948 ACGAGTCTATAGCCTAGCCCTAG 60.055 52.174 0.00 0.00 0.00 3.02
2208 2348 3.198200 CGAGTCTATAGCCTAGCCCTAGA 59.802 52.174 3.93 0.00 35.21 2.43
2209 2349 4.141574 CGAGTCTATAGCCTAGCCCTAGAT 60.142 50.000 3.93 0.00 35.21 1.98
2210 2350 5.630539 CGAGTCTATAGCCTAGCCCTAGATT 60.631 48.000 3.93 0.00 35.21 2.40
2211 2351 5.515106 AGTCTATAGCCTAGCCCTAGATTG 58.485 45.833 3.93 0.00 35.21 2.67
2212 2352 5.015817 AGTCTATAGCCTAGCCCTAGATTGT 59.984 44.000 3.93 0.00 35.21 2.71
2213 2353 5.717654 GTCTATAGCCTAGCCCTAGATTGTT 59.282 44.000 3.93 0.00 35.21 2.83
2214 2354 6.890814 GTCTATAGCCTAGCCCTAGATTGTTA 59.109 42.308 3.93 0.00 35.21 2.41
2215 2355 7.067737 GTCTATAGCCTAGCCCTAGATTGTTAG 59.932 44.444 3.93 0.00 35.21 2.34
2216 2356 3.243724 AGCCTAGCCCTAGATTGTTAGG 58.756 50.000 3.93 10.43 39.99 2.69
2217 2357 3.116707 AGCCTAGCCCTAGATTGTTAGGA 60.117 47.826 15.84 0.00 42.39 2.94
2218 2358 3.841255 GCCTAGCCCTAGATTGTTAGGAT 59.159 47.826 15.84 0.00 42.39 3.24
2219 2359 4.081365 GCCTAGCCCTAGATTGTTAGGATC 60.081 50.000 15.84 0.00 42.39 3.36
2220 2360 5.087323 CCTAGCCCTAGATTGTTAGGATCA 58.913 45.833 3.93 0.00 42.39 2.92
2221 2361 5.186797 CCTAGCCCTAGATTGTTAGGATCAG 59.813 48.000 3.93 0.00 42.39 2.90
2222 2362 3.326297 AGCCCTAGATTGTTAGGATCAGC 59.674 47.826 0.00 0.00 42.39 4.26
2223 2363 3.326297 GCCCTAGATTGTTAGGATCAGCT 59.674 47.826 0.00 0.00 42.39 4.24
2224 2364 4.562552 GCCCTAGATTGTTAGGATCAGCTC 60.563 50.000 0.00 0.00 42.39 4.09
2225 2365 4.321601 CCCTAGATTGTTAGGATCAGCTCG 60.322 50.000 0.00 0.00 42.39 5.03
2226 2366 4.279671 CCTAGATTGTTAGGATCAGCTCGT 59.720 45.833 0.00 0.00 42.39 4.18
2227 2367 4.052159 AGATTGTTAGGATCAGCTCGTG 57.948 45.455 0.00 0.00 0.00 4.35
2228 2368 2.672961 TTGTTAGGATCAGCTCGTGG 57.327 50.000 0.00 0.00 0.00 4.94
2229 2369 1.557099 TGTTAGGATCAGCTCGTGGT 58.443 50.000 0.00 0.00 0.00 4.16
2230 2370 1.899814 TGTTAGGATCAGCTCGTGGTT 59.100 47.619 0.00 0.00 0.00 3.67
2231 2371 2.271800 GTTAGGATCAGCTCGTGGTTG 58.728 52.381 0.00 0.00 0.00 3.77
2232 2372 1.557099 TAGGATCAGCTCGTGGTTGT 58.443 50.000 0.00 0.00 0.00 3.32
2233 2373 1.557099 AGGATCAGCTCGTGGTTGTA 58.443 50.000 0.00 0.00 0.00 2.41
2234 2374 1.478510 AGGATCAGCTCGTGGTTGTAG 59.521 52.381 0.00 0.00 0.00 2.74
2235 2375 1.476891 GGATCAGCTCGTGGTTGTAGA 59.523 52.381 0.00 0.00 0.00 2.59
2236 2376 2.101582 GGATCAGCTCGTGGTTGTAGAT 59.898 50.000 0.00 0.00 0.00 1.98
2237 2377 3.318275 GGATCAGCTCGTGGTTGTAGATA 59.682 47.826 0.00 0.00 0.00 1.98
2238 2378 4.202121 GGATCAGCTCGTGGTTGTAGATAA 60.202 45.833 0.00 0.00 0.00 1.75
2239 2379 4.794278 TCAGCTCGTGGTTGTAGATAAA 57.206 40.909 0.00 0.00 0.00 1.40
2240 2380 5.339008 TCAGCTCGTGGTTGTAGATAAAT 57.661 39.130 0.00 0.00 0.00 1.40
2241 2381 5.348986 TCAGCTCGTGGTTGTAGATAAATC 58.651 41.667 0.00 0.00 0.00 2.17
2242 2382 4.508124 CAGCTCGTGGTTGTAGATAAATCC 59.492 45.833 0.00 0.00 0.00 3.01
2243 2383 4.406003 AGCTCGTGGTTGTAGATAAATCCT 59.594 41.667 0.00 0.00 0.00 3.24
2244 2384 5.597182 AGCTCGTGGTTGTAGATAAATCCTA 59.403 40.000 0.00 0.00 0.00 2.94
2245 2385 6.097839 AGCTCGTGGTTGTAGATAAATCCTAA 59.902 38.462 0.00 0.00 0.00 2.69
2246 2386 6.200475 GCTCGTGGTTGTAGATAAATCCTAAC 59.800 42.308 0.00 0.00 0.00 2.34
2247 2387 7.414222 TCGTGGTTGTAGATAAATCCTAACT 57.586 36.000 0.00 0.00 0.00 2.24
2248 2388 7.262772 TCGTGGTTGTAGATAAATCCTAACTG 58.737 38.462 0.00 0.00 0.00 3.16
2249 2389 6.479001 CGTGGTTGTAGATAAATCCTAACTGG 59.521 42.308 0.00 0.00 37.10 4.00
2265 2405 7.114095 TCCTAACTGGATTGTATTTTGTACCC 58.886 38.462 0.00 0.00 40.56 3.69
2266 2406 7.037153 TCCTAACTGGATTGTATTTTGTACCCT 60.037 37.037 0.00 0.00 40.56 4.34
2267 2407 6.834168 AACTGGATTGTATTTTGTACCCTG 57.166 37.500 0.00 0.00 0.00 4.45
2268 2408 4.705023 ACTGGATTGTATTTTGTACCCTGC 59.295 41.667 0.00 0.00 0.00 4.85
2269 2409 4.020543 TGGATTGTATTTTGTACCCTGCC 58.979 43.478 0.00 0.00 0.00 4.85
2270 2410 4.264172 TGGATTGTATTTTGTACCCTGCCT 60.264 41.667 0.00 0.00 0.00 4.75
2271 2411 4.097892 GGATTGTATTTTGTACCCTGCCTG 59.902 45.833 0.00 0.00 0.00 4.85
2272 2412 4.374689 TTGTATTTTGTACCCTGCCTGA 57.625 40.909 0.00 0.00 0.00 3.86
2273 2413 3.950397 TGTATTTTGTACCCTGCCTGAG 58.050 45.455 0.00 0.00 0.00 3.35
2274 2414 3.329520 TGTATTTTGTACCCTGCCTGAGT 59.670 43.478 0.00 0.00 0.00 3.41
2275 2415 4.532916 TGTATTTTGTACCCTGCCTGAGTA 59.467 41.667 0.00 0.00 0.00 2.59
2276 2416 4.862641 ATTTTGTACCCTGCCTGAGTAT 57.137 40.909 0.00 0.00 0.00 2.12
2277 2417 5.968676 ATTTTGTACCCTGCCTGAGTATA 57.031 39.130 0.00 0.00 0.00 1.47
2278 2418 5.765576 TTTTGTACCCTGCCTGAGTATAA 57.234 39.130 0.00 0.00 0.00 0.98
2279 2419 5.765576 TTTGTACCCTGCCTGAGTATAAA 57.234 39.130 0.00 0.00 0.00 1.40
2280 2420 5.968676 TTGTACCCTGCCTGAGTATAAAT 57.031 39.130 0.00 0.00 0.00 1.40
2281 2421 5.290493 TGTACCCTGCCTGAGTATAAATG 57.710 43.478 0.00 0.00 0.00 2.32
2282 2422 3.864789 ACCCTGCCTGAGTATAAATGG 57.135 47.619 0.00 0.00 0.00 3.16
2283 2423 3.393687 ACCCTGCCTGAGTATAAATGGA 58.606 45.455 0.00 0.00 0.00 3.41
2284 2424 3.785887 ACCCTGCCTGAGTATAAATGGAA 59.214 43.478 0.00 0.00 0.00 3.53
2285 2425 4.141390 ACCCTGCCTGAGTATAAATGGAAG 60.141 45.833 0.00 0.00 0.00 3.46
2286 2426 4.392940 CCTGCCTGAGTATAAATGGAAGG 58.607 47.826 0.00 0.00 37.28 3.46
2288 2428 3.820557 GCCTGAGTATAAATGGAAGGCA 58.179 45.455 5.93 0.00 46.37 4.75
2289 2429 4.207165 GCCTGAGTATAAATGGAAGGCAA 58.793 43.478 5.93 0.00 46.37 4.52
2290 2430 4.276926 GCCTGAGTATAAATGGAAGGCAAG 59.723 45.833 5.93 0.00 46.37 4.01
2291 2431 4.823989 CCTGAGTATAAATGGAAGGCAAGG 59.176 45.833 0.00 0.00 0.00 3.61
2292 2432 4.207165 TGAGTATAAATGGAAGGCAAGGC 58.793 43.478 0.00 0.00 0.00 4.35
2303 2443 2.884367 GCAAGGCCTGCGCATAAA 59.116 55.556 19.96 0.00 42.37 1.40
2304 2444 1.438814 GCAAGGCCTGCGCATAAAT 59.561 52.632 19.96 0.00 42.37 1.40
2305 2445 0.595825 GCAAGGCCTGCGCATAAATC 60.596 55.000 19.96 0.00 42.37 2.17
2306 2446 0.740149 CAAGGCCTGCGCATAAATCA 59.260 50.000 12.24 0.00 36.38 2.57
2307 2447 1.027357 AAGGCCTGCGCATAAATCAG 58.973 50.000 12.24 0.00 36.38 2.90
2309 2449 1.656441 GCCTGCGCATAAATCAGGG 59.344 57.895 12.24 7.19 45.63 4.45
2310 2450 1.656441 CCTGCGCATAAATCAGGGC 59.344 57.895 12.24 0.00 42.70 5.19
2314 2454 2.514205 GCGCATAAATCAGGGCAATT 57.486 45.000 0.30 0.00 42.51 2.32
2315 2455 2.397549 GCGCATAAATCAGGGCAATTC 58.602 47.619 0.30 0.00 42.51 2.17
2316 2456 2.223782 GCGCATAAATCAGGGCAATTCA 60.224 45.455 0.30 0.00 42.51 2.57
2317 2457 3.553508 GCGCATAAATCAGGGCAATTCAT 60.554 43.478 0.30 0.00 42.51 2.57
2318 2458 4.624015 CGCATAAATCAGGGCAATTCATT 58.376 39.130 0.00 0.00 0.00 2.57
2319 2459 4.682860 CGCATAAATCAGGGCAATTCATTC 59.317 41.667 0.00 0.00 0.00 2.67
2320 2460 4.992951 GCATAAATCAGGGCAATTCATTCC 59.007 41.667 0.00 0.00 0.00 3.01
2321 2461 5.221581 GCATAAATCAGGGCAATTCATTCCT 60.222 40.000 0.00 0.00 0.00 3.36
2322 2462 6.687139 GCATAAATCAGGGCAATTCATTCCTT 60.687 38.462 0.00 0.00 0.00 3.36
2323 2463 5.349061 AAATCAGGGCAATTCATTCCTTC 57.651 39.130 0.00 0.00 0.00 3.46
2324 2464 3.744940 TCAGGGCAATTCATTCCTTCT 57.255 42.857 0.00 0.00 0.00 2.85
2325 2465 3.359033 TCAGGGCAATTCATTCCTTCTG 58.641 45.455 0.00 0.00 0.00 3.02
2326 2466 3.010472 TCAGGGCAATTCATTCCTTCTGA 59.990 43.478 0.00 0.00 0.00 3.27
2327 2467 3.129988 CAGGGCAATTCATTCCTTCTGAC 59.870 47.826 0.00 0.00 0.00 3.51
2328 2468 3.011032 AGGGCAATTCATTCCTTCTGACT 59.989 43.478 0.00 0.00 0.00 3.41
2329 2469 4.228210 AGGGCAATTCATTCCTTCTGACTA 59.772 41.667 0.00 0.00 0.00 2.59
2330 2470 4.578105 GGGCAATTCATTCCTTCTGACTAG 59.422 45.833 0.00 0.00 0.00 2.57
2422 2878 3.710326 CAGTCCTTGCCATGAATGATG 57.290 47.619 0.00 0.00 0.00 3.07
2423 2879 3.021695 CAGTCCTTGCCATGAATGATGT 58.978 45.455 0.00 0.00 0.00 3.06
2511 2967 5.402270 GCAATCATGTTTAGTGTTGTTCCAC 59.598 40.000 0.00 0.00 35.53 4.02
2533 2989 5.009010 CACAACTTTGTAAGGCAGATTGTCT 59.991 40.000 0.00 0.00 39.91 3.41
2537 2993 7.817418 ACTTTGTAAGGCAGATTGTCTTTTA 57.183 32.000 0.86 0.00 39.66 1.52
2575 3064 1.893808 CAACCTGCAGGAGCGTTGT 60.894 57.895 39.19 12.29 46.23 3.32
2642 3157 1.395608 GCGAAAAATGAACGATCCCGA 59.604 47.619 0.00 0.00 39.50 5.14
2664 3179 0.906775 AAAGTAATTCTCCGCGGGGA 59.093 50.000 27.50 27.50 41.08 4.81
2665 3180 0.906775 AAGTAATTCTCCGCGGGGAA 59.093 50.000 40.46 40.46 43.27 3.97
2712 3412 4.141088 AGTCCTTGCCATGAATGATACCAT 60.141 41.667 0.00 0.00 33.66 3.55
2715 3415 4.022589 CCTTGCCATGAATGATACCATCAC 60.023 45.833 0.00 0.00 43.01 3.06
2787 3487 5.816258 TGTATGGCATGCAACCATTTTAATG 59.184 36.000 24.80 1.32 45.86 1.90
2868 3568 1.535462 CAACCCATTCTGTCCGTGAAC 59.465 52.381 0.00 0.00 0.00 3.18
2869 3569 0.320421 ACCCATTCTGTCCGTGAACG 60.320 55.000 0.00 0.00 39.44 3.95
2870 3570 0.320421 CCCATTCTGTCCGTGAACGT 60.320 55.000 1.75 0.00 37.74 3.99
2871 3571 0.790207 CCATTCTGTCCGTGAACGTG 59.210 55.000 1.75 0.00 37.74 4.49
2873 3573 2.131972 CATTCTGTCCGTGAACGTGAA 58.868 47.619 1.75 2.06 37.74 3.18
2874 3574 1.847818 TTCTGTCCGTGAACGTGAAG 58.152 50.000 1.75 0.00 37.74 3.02
2875 3575 0.742505 TCTGTCCGTGAACGTGAAGT 59.257 50.000 1.75 0.00 37.74 3.01
2876 3576 1.948834 TCTGTCCGTGAACGTGAAGTA 59.051 47.619 1.75 0.00 37.74 2.24
2877 3577 2.358582 TCTGTCCGTGAACGTGAAGTAA 59.641 45.455 1.75 0.00 37.74 2.24
2878 3578 3.005050 TCTGTCCGTGAACGTGAAGTAAT 59.995 43.478 1.75 0.00 37.74 1.89
2916 3616 5.762825 AGTGCGTACCGATAAGAAATCTA 57.237 39.130 0.00 0.00 0.00 1.98
2919 3619 6.016527 AGTGCGTACCGATAAGAAATCTATCA 60.017 38.462 0.00 0.00 0.00 2.15
3061 3761 3.619483 GCACGCATGTAGTAATGTACCAA 59.381 43.478 0.00 0.00 0.00 3.67
3062 3762 4.493545 GCACGCATGTAGTAATGTACCAAC 60.494 45.833 0.00 0.00 0.00 3.77
3065 3765 4.519213 GCATGTAGTAATGTACCAACCCA 58.481 43.478 0.00 0.00 0.00 4.51
3090 3793 9.820725 CAATCTCTCTTTTCTCATACAAGATCT 57.179 33.333 0.00 0.00 0.00 2.75
3093 3796 9.253832 TCTCTCTTTTCTCATACAAGATCTCTT 57.746 33.333 0.00 0.00 36.45 2.85
3098 3801 8.609617 TTTTCTCATACAAGATCTCTTAGGGA 57.390 34.615 0.00 0.00 34.28 4.20
3102 3805 7.841729 TCTCATACAAGATCTCTTAGGGAAACT 59.158 37.037 0.00 0.00 34.28 2.66
3104 3807 4.837972 ACAAGATCTCTTAGGGAAACTGC 58.162 43.478 0.00 0.00 34.28 4.40
3108 3811 7.092668 ACAAGATCTCTTAGGGAAACTGCTATT 60.093 37.037 0.00 0.00 34.28 1.73
3109 3812 7.444703 AGATCTCTTAGGGAAACTGCTATTT 57.555 36.000 0.00 0.00 0.00 1.40
3110 3813 7.505258 AGATCTCTTAGGGAAACTGCTATTTC 58.495 38.462 0.00 5.07 37.78 2.17
3111 3814 6.875972 TCTCTTAGGGAAACTGCTATTTCT 57.124 37.500 11.45 0.00 38.43 2.52
3114 3817 7.016153 TCTTAGGGAAACTGCTATTTCTTGA 57.984 36.000 11.45 3.42 38.43 3.02
3116 3819 4.013050 AGGGAAACTGCTATTTCTTGAGC 58.987 43.478 11.45 0.00 38.43 4.26
3119 3822 5.397326 GGAAACTGCTATTTCTTGAGCTTG 58.603 41.667 11.45 0.00 39.54 4.01
3120 3823 4.431661 AACTGCTATTTCTTGAGCTTGC 57.568 40.909 0.00 0.00 39.54 4.01
3121 3824 2.417933 ACTGCTATTTCTTGAGCTTGCG 59.582 45.455 0.00 0.00 39.54 4.85
3122 3825 2.417933 CTGCTATTTCTTGAGCTTGCGT 59.582 45.455 0.00 0.00 39.54 5.24
3123 3826 2.813754 TGCTATTTCTTGAGCTTGCGTT 59.186 40.909 0.00 0.00 39.54 4.84
3124 3827 3.166657 GCTATTTCTTGAGCTTGCGTTG 58.833 45.455 0.00 0.00 35.73 4.10
3155 4606 7.137490 TCTTAAAGAGAAACATGTGATGCAG 57.863 36.000 0.00 0.00 0.00 4.41
3156 4607 3.844577 AAGAGAAACATGTGATGCAGC 57.155 42.857 0.00 0.00 0.00 5.25
3157 4608 2.786777 AGAGAAACATGTGATGCAGCA 58.213 42.857 0.00 0.00 0.00 4.41
3158 4609 3.151554 AGAGAAACATGTGATGCAGCAA 58.848 40.909 6.05 0.00 0.00 3.91
3159 4610 3.570975 AGAGAAACATGTGATGCAGCAAA 59.429 39.130 6.05 0.00 0.00 3.68
3160 4611 3.909430 AGAAACATGTGATGCAGCAAAG 58.091 40.909 6.05 1.62 0.00 2.77
3161 4612 3.319972 AGAAACATGTGATGCAGCAAAGT 59.680 39.130 6.05 2.36 0.00 2.66
3162 4613 4.520111 AGAAACATGTGATGCAGCAAAGTA 59.480 37.500 6.05 0.00 0.00 2.24
3163 4614 4.852134 AACATGTGATGCAGCAAAGTAA 57.148 36.364 6.05 0.00 0.00 2.24
3164 4615 4.852134 ACATGTGATGCAGCAAAGTAAA 57.148 36.364 6.05 0.00 0.00 2.01
3165 4616 5.199024 ACATGTGATGCAGCAAAGTAAAA 57.801 34.783 6.05 0.00 0.00 1.52
3166 4617 5.599732 ACATGTGATGCAGCAAAGTAAAAA 58.400 33.333 6.05 0.00 0.00 1.94
3167 4618 6.225318 ACATGTGATGCAGCAAAGTAAAAAT 58.775 32.000 6.05 0.00 0.00 1.82
3168 4619 7.377398 ACATGTGATGCAGCAAAGTAAAAATA 58.623 30.769 6.05 0.00 0.00 1.40
3169 4620 7.871973 ACATGTGATGCAGCAAAGTAAAAATAA 59.128 29.630 6.05 0.00 0.00 1.40
3171 4622 7.432869 TGTGATGCAGCAAAGTAAAAATAAGT 58.567 30.769 6.05 0.00 0.00 2.24
3172 4623 8.572185 TGTGATGCAGCAAAGTAAAAATAAGTA 58.428 29.630 6.05 0.00 0.00 2.24
3173 4624 9.573133 GTGATGCAGCAAAGTAAAAATAAGTAT 57.427 29.630 6.05 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.422597 TCATTCCACCTAACAACGCAG 58.577 47.619 0.00 0.00 0.00 5.18
4 5 2.552599 TCATTCCACCTAACAACGCA 57.447 45.000 0.00 0.00 0.00 5.24
5 6 2.161609 CCTTCATTCCACCTAACAACGC 59.838 50.000 0.00 0.00 0.00 4.84
6 7 2.161609 GCCTTCATTCCACCTAACAACG 59.838 50.000 0.00 0.00 0.00 4.10
7 8 3.153919 TGCCTTCATTCCACCTAACAAC 58.846 45.455 0.00 0.00 0.00 3.32
8 9 3.517296 TGCCTTCATTCCACCTAACAA 57.483 42.857 0.00 0.00 0.00 2.83
9 10 3.355378 CATGCCTTCATTCCACCTAACA 58.645 45.455 0.00 0.00 0.00 2.41
10 11 2.099756 GCATGCCTTCATTCCACCTAAC 59.900 50.000 6.36 0.00 0.00 2.34
11 12 2.378038 GCATGCCTTCATTCCACCTAA 58.622 47.619 6.36 0.00 0.00 2.69
12 13 1.410083 GGCATGCCTTCATTCCACCTA 60.410 52.381 29.98 0.00 36.24 3.08
13 14 0.685458 GGCATGCCTTCATTCCACCT 60.685 55.000 29.98 0.00 36.24 4.00
14 15 0.685458 AGGCATGCCTTCATTCCACC 60.685 55.000 34.07 3.53 45.70 4.61
15 16 0.458669 CAGGCATGCCTTCATTCCAC 59.541 55.000 36.92 5.78 45.70 4.02
16 17 0.685131 CCAGGCATGCCTTCATTCCA 60.685 55.000 36.92 0.00 45.70 3.53
17 18 2.024590 GCCAGGCATGCCTTCATTCC 62.025 60.000 36.92 16.47 45.70 3.01
18 19 1.041447 AGCCAGGCATGCCTTCATTC 61.041 55.000 36.92 21.54 45.70 2.67
19 20 0.259647 TAGCCAGGCATGCCTTCATT 59.740 50.000 36.92 22.88 45.70 2.57
20 21 0.466922 GTAGCCAGGCATGCCTTCAT 60.467 55.000 36.92 25.10 45.70 2.57
21 22 1.077501 GTAGCCAGGCATGCCTTCA 60.078 57.895 36.92 18.40 45.70 3.02
22 23 2.182842 CGTAGCCAGGCATGCCTTC 61.183 63.158 36.92 28.45 45.70 3.46
23 24 2.124570 CGTAGCCAGGCATGCCTT 60.125 61.111 36.92 24.63 45.70 4.35
25 26 4.489771 ACCGTAGCCAGGCATGCC 62.490 66.667 30.12 30.12 0.00 4.40
26 27 3.204827 CACCGTAGCCAGGCATGC 61.205 66.667 15.80 9.90 0.00 4.06
27 28 2.514592 CCACCGTAGCCAGGCATG 60.515 66.667 15.80 5.17 0.00 4.06
28 29 4.489771 GCCACCGTAGCCAGGCAT 62.490 66.667 15.80 0.95 46.26 4.40
31 32 2.033448 TTTGCCACCGTAGCCAGG 59.967 61.111 0.00 0.00 0.00 4.45
32 33 1.003839 TCTTTGCCACCGTAGCCAG 60.004 57.895 0.00 0.00 0.00 4.85
33 34 1.302192 GTCTTTGCCACCGTAGCCA 60.302 57.895 0.00 0.00 0.00 4.75
34 35 2.038837 GGTCTTTGCCACCGTAGCC 61.039 63.158 0.00 0.00 0.00 3.93
35 36 1.003718 AGGTCTTTGCCACCGTAGC 60.004 57.895 0.00 0.00 39.13 3.58
36 37 0.608640 AGAGGTCTTTGCCACCGTAG 59.391 55.000 0.00 0.00 39.13 3.51
37 38 1.547372 GTAGAGGTCTTTGCCACCGTA 59.453 52.381 0.00 0.00 39.13 4.02
38 39 0.320697 GTAGAGGTCTTTGCCACCGT 59.679 55.000 0.00 0.00 39.13 4.83
39 40 0.608640 AGTAGAGGTCTTTGCCACCG 59.391 55.000 0.00 0.00 39.13 4.94
40 41 2.832733 AGTAGTAGAGGTCTTTGCCACC 59.167 50.000 0.00 0.00 0.00 4.61
41 42 4.705991 ACTAGTAGTAGAGGTCTTTGCCAC 59.294 45.833 11.68 0.00 0.00 5.01
42 43 4.931914 ACTAGTAGTAGAGGTCTTTGCCA 58.068 43.478 11.68 0.00 0.00 4.92
55 56 8.256605 AGAACTTCATCGACACTACTAGTAGTA 58.743 37.037 30.34 18.15 43.98 1.82
56 57 7.104939 AGAACTTCATCGACACTACTAGTAGT 58.895 38.462 26.61 26.61 46.52 2.73
57 58 7.542534 AGAACTTCATCGACACTACTAGTAG 57.457 40.000 25.30 25.30 39.04 2.57
58 59 7.918536 AAGAACTTCATCGACACTACTAGTA 57.081 36.000 1.89 1.89 0.00 1.82
59 60 6.821031 AAGAACTTCATCGACACTACTAGT 57.179 37.500 0.00 0.00 0.00 2.57
60 61 7.061210 CACAAAGAACTTCATCGACACTACTAG 59.939 40.741 0.00 0.00 0.00 2.57
61 62 6.861572 CACAAAGAACTTCATCGACACTACTA 59.138 38.462 0.00 0.00 0.00 1.82
62 63 5.692204 CACAAAGAACTTCATCGACACTACT 59.308 40.000 0.00 0.00 0.00 2.57
63 64 5.690409 TCACAAAGAACTTCATCGACACTAC 59.310 40.000 0.00 0.00 0.00 2.73
64 65 5.838529 TCACAAAGAACTTCATCGACACTA 58.161 37.500 0.00 0.00 0.00 2.74
65 66 4.693283 TCACAAAGAACTTCATCGACACT 58.307 39.130 0.00 0.00 0.00 3.55
66 67 5.377358 CATCACAAAGAACTTCATCGACAC 58.623 41.667 0.00 0.00 0.00 3.67
67 68 4.452114 CCATCACAAAGAACTTCATCGACA 59.548 41.667 0.00 0.00 0.00 4.35
68 69 4.142816 CCCATCACAAAGAACTTCATCGAC 60.143 45.833 0.00 0.00 0.00 4.20
69 70 4.002982 CCCATCACAAAGAACTTCATCGA 58.997 43.478 0.00 0.00 0.00 3.59
70 71 3.127548 CCCCATCACAAAGAACTTCATCG 59.872 47.826 0.00 0.00 0.00 3.84
71 72 4.335416 TCCCCATCACAAAGAACTTCATC 58.665 43.478 0.00 0.00 0.00 2.92
72 73 4.387026 TCCCCATCACAAAGAACTTCAT 57.613 40.909 0.00 0.00 0.00 2.57
73 74 3.874383 TCCCCATCACAAAGAACTTCA 57.126 42.857 0.00 0.00 0.00 3.02
74 75 3.445096 CCATCCCCATCACAAAGAACTTC 59.555 47.826 0.00 0.00 0.00 3.01
75 76 3.434309 CCATCCCCATCACAAAGAACTT 58.566 45.455 0.00 0.00 0.00 2.66
76 77 2.291800 CCCATCCCCATCACAAAGAACT 60.292 50.000 0.00 0.00 0.00 3.01
77 78 2.102578 CCCATCCCCATCACAAAGAAC 58.897 52.381 0.00 0.00 0.00 3.01
78 79 1.006998 CCCCATCCCCATCACAAAGAA 59.993 52.381 0.00 0.00 0.00 2.52
79 80 0.630673 CCCCATCCCCATCACAAAGA 59.369 55.000 0.00 0.00 0.00 2.52
80 81 0.630673 TCCCCATCCCCATCACAAAG 59.369 55.000 0.00 0.00 0.00 2.77
81 82 1.063038 CATCCCCATCCCCATCACAAA 60.063 52.381 0.00 0.00 0.00 2.83
82 83 0.557238 CATCCCCATCCCCATCACAA 59.443 55.000 0.00 0.00 0.00 3.33
83 84 1.362744 CCATCCCCATCCCCATCACA 61.363 60.000 0.00 0.00 0.00 3.58
84 85 1.462035 CCATCCCCATCCCCATCAC 59.538 63.158 0.00 0.00 0.00 3.06
85 86 2.472463 GCCATCCCCATCCCCATCA 61.472 63.158 0.00 0.00 0.00 3.07
86 87 2.022538 TTGCCATCCCCATCCCCATC 62.023 60.000 0.00 0.00 0.00 3.51
87 88 1.381900 ATTGCCATCCCCATCCCCAT 61.382 55.000 0.00 0.00 0.00 4.00
88 89 1.601718 AATTGCCATCCCCATCCCCA 61.602 55.000 0.00 0.00 0.00 4.96
89 90 1.123246 CAATTGCCATCCCCATCCCC 61.123 60.000 0.00 0.00 0.00 4.81
90 91 1.123246 CCAATTGCCATCCCCATCCC 61.123 60.000 0.00 0.00 0.00 3.85
91 92 0.105555 TCCAATTGCCATCCCCATCC 60.106 55.000 0.00 0.00 0.00 3.51
92 93 2.019807 ATCCAATTGCCATCCCCATC 57.980 50.000 0.00 0.00 0.00 3.51
115 116 1.567649 AGCAACATCCACCATCCATCT 59.432 47.619 0.00 0.00 0.00 2.90
119 120 0.034186 TGGAGCAACATCCACCATCC 60.034 55.000 0.00 0.00 44.56 3.51
141 142 3.387050 GGGATATAGGTTGAACCGTCAGT 59.613 47.826 8.98 0.00 44.90 3.41
142 143 3.552273 CGGGATATAGGTTGAACCGTCAG 60.552 52.174 8.98 1.69 44.90 3.51
143 144 2.363038 CGGGATATAGGTTGAACCGTCA 59.637 50.000 8.98 0.00 44.90 4.35
144 145 2.865276 GCGGGATATAGGTTGAACCGTC 60.865 54.545 8.98 6.18 44.90 4.79
145 146 1.069668 GCGGGATATAGGTTGAACCGT 59.930 52.381 8.98 4.65 44.90 4.83
146 147 1.069513 TGCGGGATATAGGTTGAACCG 59.930 52.381 8.98 0.00 44.90 4.44
147 148 2.922740 TGCGGGATATAGGTTGAACC 57.077 50.000 6.16 6.16 38.99 3.62
148 149 5.570234 TTTTTGCGGGATATAGGTTGAAC 57.430 39.130 0.00 0.00 0.00 3.18
174 175 5.417894 AGGTTGAACCGTTCTCTTTTTCTTT 59.582 36.000 8.98 0.00 44.90 2.52
176 177 4.524053 AGGTTGAACCGTTCTCTTTTTCT 58.476 39.130 8.98 0.00 44.90 2.52
178 179 7.881232 TGATATAGGTTGAACCGTTCTCTTTTT 59.119 33.333 8.98 0.00 44.90 1.94
179 180 7.391620 TGATATAGGTTGAACCGTTCTCTTTT 58.608 34.615 8.98 0.00 44.90 2.27
180 181 6.942976 TGATATAGGTTGAACCGTTCTCTTT 58.057 36.000 8.98 5.73 44.90 2.52
181 182 6.540438 TGATATAGGTTGAACCGTTCTCTT 57.460 37.500 8.98 5.20 44.90 2.85
182 183 6.540438 TTGATATAGGTTGAACCGTTCTCT 57.460 37.500 8.98 9.39 44.90 3.10
183 184 6.292919 GCATTGATATAGGTTGAACCGTTCTC 60.293 42.308 8.98 5.97 44.90 2.87
184 185 5.527582 GCATTGATATAGGTTGAACCGTTCT 59.472 40.000 8.98 0.00 44.90 3.01
215 216 4.691860 TGCTAGACTTCCGTTGTACTAC 57.308 45.455 0.00 0.00 0.00 2.73
216 217 5.416639 TCATTGCTAGACTTCCGTTGTACTA 59.583 40.000 0.00 0.00 0.00 1.82
217 218 4.219944 TCATTGCTAGACTTCCGTTGTACT 59.780 41.667 0.00 0.00 0.00 2.73
221 228 4.183865 TCATCATTGCTAGACTTCCGTTG 58.816 43.478 0.00 0.00 0.00 4.10
224 231 5.745514 CATTTCATCATTGCTAGACTTCCG 58.254 41.667 0.00 0.00 0.00 4.30
259 266 2.749280 TACACCAGTGCTCACATCAG 57.251 50.000 2.63 0.00 0.00 2.90
285 292 2.272923 GGTTTCCAACCCCATTCGG 58.727 57.895 0.00 0.00 46.12 4.30
295 327 5.327737 ACCACCTAGTATTTGGTTTCCAA 57.672 39.130 0.00 0.00 40.98 3.53
307 339 4.937620 CACGACTACTTGTACCACCTAGTA 59.062 45.833 0.00 0.00 0.00 1.82
308 340 3.755378 CACGACTACTTGTACCACCTAGT 59.245 47.826 0.00 0.00 0.00 2.57
309 341 3.755378 ACACGACTACTTGTACCACCTAG 59.245 47.826 0.00 0.00 0.00 3.02
325 357 1.010350 ACACGAGACACGACACGAC 60.010 57.895 0.00 0.00 45.77 4.34
327 359 2.009226 CCACACGAGACACGACACG 61.009 63.158 0.00 0.00 45.77 4.49
328 360 2.300787 GCCACACGAGACACGACAC 61.301 63.158 0.00 0.00 45.77 3.67
329 361 2.027024 GCCACACGAGACACGACA 59.973 61.111 0.00 0.00 45.77 4.35
330 362 2.016704 CAGCCACACGAGACACGAC 61.017 63.158 0.00 0.00 45.77 4.34
331 363 2.335011 CAGCCACACGAGACACGA 59.665 61.111 0.00 0.00 45.77 4.35
333 365 0.108615 ATAGCAGCCACACGAGACAC 60.109 55.000 0.00 0.00 0.00 3.67
334 366 0.108662 CATAGCAGCCACACGAGACA 60.109 55.000 0.00 0.00 0.00 3.41
337 384 0.108662 TCACATAGCAGCCACACGAG 60.109 55.000 0.00 0.00 0.00 4.18
377 424 3.238788 TCTAGTCTCTGTTGACCACCA 57.761 47.619 0.00 0.00 37.66 4.17
395 442 9.570488 GTAGTCTCACTAACGATATTTTGTTCT 57.430 33.333 0.00 0.00 31.62 3.01
397 444 7.763071 GGGTAGTCTCACTAACGATATTTTGTT 59.237 37.037 0.00 0.00 39.26 2.83
399 446 6.417044 CGGGTAGTCTCACTAACGATATTTTG 59.583 42.308 0.00 0.00 39.26 2.44
400 447 6.319658 TCGGGTAGTCTCACTAACGATATTTT 59.680 38.462 0.00 0.00 39.26 1.82
404 451 4.406648 TCGGGTAGTCTCACTAACGATA 57.593 45.455 0.00 0.00 39.26 2.92
405 452 3.272574 TCGGGTAGTCTCACTAACGAT 57.727 47.619 0.00 0.00 39.26 3.73
406 453 2.768253 TCGGGTAGTCTCACTAACGA 57.232 50.000 0.00 7.33 39.26 3.85
407 454 2.746362 ACTTCGGGTAGTCTCACTAACG 59.254 50.000 3.78 3.78 39.26 3.18
408 455 5.886960 TTACTTCGGGTAGTCTCACTAAC 57.113 43.478 0.00 0.00 37.67 2.34
409 456 8.757982 ATTATTACTTCGGGTAGTCTCACTAA 57.242 34.615 0.00 0.00 31.62 2.24
410 457 8.757982 AATTATTACTTCGGGTAGTCTCACTA 57.242 34.615 0.00 0.00 0.00 2.74
411 458 7.657023 AATTATTACTTCGGGTAGTCTCACT 57.343 36.000 0.00 0.00 0.00 3.41
501 558 4.697514 TCCATCATCCGCAAAAACAAAAA 58.302 34.783 0.00 0.00 0.00 1.94
502 559 4.327982 TCCATCATCCGCAAAAACAAAA 57.672 36.364 0.00 0.00 0.00 2.44
503 560 4.021632 TCATCCATCATCCGCAAAAACAAA 60.022 37.500 0.00 0.00 0.00 2.83
505 562 3.087781 TCATCCATCATCCGCAAAAACA 58.912 40.909 0.00 0.00 0.00 2.83
506 563 3.489738 CCTCATCCATCATCCGCAAAAAC 60.490 47.826 0.00 0.00 0.00 2.43
507 564 2.689471 CCTCATCCATCATCCGCAAAAA 59.311 45.455 0.00 0.00 0.00 1.94
508 565 2.300433 CCTCATCCATCATCCGCAAAA 58.700 47.619 0.00 0.00 0.00 2.44
509 566 1.477377 CCCTCATCCATCATCCGCAAA 60.477 52.381 0.00 0.00 0.00 3.68
511 568 0.763986 TCCCTCATCCATCATCCGCA 60.764 55.000 0.00 0.00 0.00 5.69
512 569 0.036577 CTCCCTCATCCATCATCCGC 60.037 60.000 0.00 0.00 0.00 5.54
513 570 1.637338 TCTCCCTCATCCATCATCCG 58.363 55.000 0.00 0.00 0.00 4.18
514 571 3.308259 CCAATCTCCCTCATCCATCATCC 60.308 52.174 0.00 0.00 0.00 3.51
515 572 3.586174 TCCAATCTCCCTCATCCATCATC 59.414 47.826 0.00 0.00 0.00 2.92
516 573 3.587951 CTCCAATCTCCCTCATCCATCAT 59.412 47.826 0.00 0.00 0.00 2.45
517 574 2.977580 CTCCAATCTCCCTCATCCATCA 59.022 50.000 0.00 0.00 0.00 3.07
518 575 2.978278 ACTCCAATCTCCCTCATCCATC 59.022 50.000 0.00 0.00 0.00 3.51
520 577 2.121948 CACTCCAATCTCCCTCATCCA 58.878 52.381 0.00 0.00 0.00 3.41
521 578 1.419387 CCACTCCAATCTCCCTCATCC 59.581 57.143 0.00 0.00 0.00 3.51
522 579 2.103941 GTCCACTCCAATCTCCCTCATC 59.896 54.545 0.00 0.00 0.00 2.92
524 581 1.573108 GTCCACTCCAATCTCCCTCA 58.427 55.000 0.00 0.00 0.00 3.86
525 582 0.833949 GGTCCACTCCAATCTCCCTC 59.166 60.000 0.00 0.00 0.00 4.30
527 584 1.522569 CGGTCCACTCCAATCTCCC 59.477 63.158 0.00 0.00 0.00 4.30
528 585 1.522569 CCGGTCCACTCCAATCTCC 59.477 63.158 0.00 0.00 0.00 3.71
529 586 1.153349 GCCGGTCCACTCCAATCTC 60.153 63.158 1.90 0.00 0.00 2.75
530 587 2.670148 GGCCGGTCCACTCCAATCT 61.670 63.158 1.90 0.00 34.01 2.40
531 588 2.124695 GGCCGGTCCACTCCAATC 60.125 66.667 1.90 0.00 34.01 2.67
541 598 1.202486 TGAATCATTAGACGGCCGGTC 60.202 52.381 31.76 23.12 46.45 4.79
542 599 0.828022 TGAATCATTAGACGGCCGGT 59.172 50.000 31.76 19.09 0.00 5.28
543 600 2.069273 GATGAATCATTAGACGGCCGG 58.931 52.381 31.76 10.66 0.00 6.13
547 625 7.959689 AGATTTCAGATGAATCATTAGACGG 57.040 36.000 0.00 0.00 33.54 4.79
616 721 4.633126 CCATTTCAGATGGCCGACATATAG 59.367 45.833 0.00 0.00 40.72 1.31
740 849 0.672401 AGGCGTTGTGTATGAACGGG 60.672 55.000 0.00 0.00 45.01 5.28
774 883 2.953284 ATGACGCCTAGCTAGGACTA 57.047 50.000 38.74 22.47 46.63 2.59
789 898 3.654414 ACGGAGAGTGACAGAAAATGAC 58.346 45.455 0.00 0.00 0.00 3.06
796 905 2.842320 CGAGACGGAGAGTGACAGA 58.158 57.895 0.00 0.00 0.00 3.41
825 934 8.994429 ATAATAATATGAAGCTCTCTTCCACG 57.006 34.615 0.00 0.00 46.28 4.94
856 969 1.982073 GCCGCATCAGGAAAAGTCGG 61.982 60.000 0.00 0.00 38.51 4.79
898 1017 0.099613 CGAGTGATCAGACACGGAGG 59.900 60.000 0.00 0.00 44.35 4.30
903 1022 3.175152 GTGATGACGAGTGATCAGACAC 58.825 50.000 5.65 0.00 34.02 3.67
918 1037 0.537188 GGAGAAGAAGCCGGTGATGA 59.463 55.000 1.90 0.00 0.00 2.92
938 1060 2.518407 TCCTTCCTAGCTCCTGTATGGA 59.482 50.000 0.00 0.00 43.86 3.41
939 1061 2.964209 TCCTTCCTAGCTCCTGTATGG 58.036 52.381 0.00 0.00 37.10 2.74
940 1062 3.964031 AGTTCCTTCCTAGCTCCTGTATG 59.036 47.826 0.00 0.00 0.00 2.39
941 1063 4.078863 AGAGTTCCTTCCTAGCTCCTGTAT 60.079 45.833 0.00 0.00 0.00 2.29
942 1064 3.269906 AGAGTTCCTTCCTAGCTCCTGTA 59.730 47.826 0.00 0.00 0.00 2.74
943 1065 2.043801 AGAGTTCCTTCCTAGCTCCTGT 59.956 50.000 0.00 0.00 0.00 4.00
944 1066 2.693074 GAGAGTTCCTTCCTAGCTCCTG 59.307 54.545 0.00 0.00 0.00 3.86
947 1069 3.632145 CAGAGAGAGTTCCTTCCTAGCTC 59.368 52.174 0.00 0.00 0.00 4.09
948 1070 3.627237 CCAGAGAGAGTTCCTTCCTAGCT 60.627 52.174 0.00 0.00 0.00 3.32
949 1071 2.693074 CCAGAGAGAGTTCCTTCCTAGC 59.307 54.545 0.00 0.00 0.00 3.42
950 1072 3.699038 CACCAGAGAGAGTTCCTTCCTAG 59.301 52.174 0.00 0.00 0.00 3.02
979 1118 5.174035 GCATGGCGACTCGATCATATAATAC 59.826 44.000 1.63 0.00 0.00 1.89
981 1120 4.115516 GCATGGCGACTCGATCATATAAT 58.884 43.478 1.63 0.00 0.00 1.28
982 1121 3.511699 GCATGGCGACTCGATCATATAA 58.488 45.455 1.63 0.00 0.00 0.98
989 1128 1.522355 CAAGGCATGGCGACTCGAT 60.522 57.895 14.30 0.00 0.00 3.59
1039 1178 0.038526 TCGGAGGCGTGTTTCTCTTC 60.039 55.000 0.00 0.00 0.00 2.87
1078 1217 1.269723 GGGAAACTGTTGCTTACTGCC 59.730 52.381 0.00 0.00 42.00 4.85
1096 1235 2.689983 GGCAAGTAATGTGAGGAATGGG 59.310 50.000 0.00 0.00 0.00 4.00
1124 1263 4.522789 TGAAGCCAAAGGTTAGTCAATTCC 59.477 41.667 0.00 0.00 32.71 3.01
1383 1522 4.729918 CCAGCAGGGACACCAGGC 62.730 72.222 0.00 0.00 40.01 4.85
1433 1572 0.261991 TTGGGGAGGAGCTCGTAGAT 59.738 55.000 9.29 0.00 33.89 1.98
1543 1682 4.733725 AGGAACGCCAGGCCCCTA 62.734 66.667 5.63 0.00 36.29 3.53
1835 1974 1.414919 CCCCTCGTCGGATAAATGGAA 59.585 52.381 0.00 0.00 33.16 3.53
1897 2036 1.379044 CATGTCCCTGAGGTTGGCC 60.379 63.158 0.00 0.00 0.00 5.36
1939 2078 0.464013 CAGCCTCCTCCTCATTGCAG 60.464 60.000 0.00 0.00 0.00 4.41
2115 2254 1.535444 ACCATGGACGTGGAGTGGA 60.535 57.895 21.47 0.00 42.02 4.02
2125 2264 1.787847 CGAAGCAACGACCATGGAC 59.212 57.895 21.47 12.21 35.09 4.02
2150 2289 3.291101 TTGGCGCTACCTCCGTCAC 62.291 63.158 7.64 0.00 40.31 3.67
2159 2298 2.415512 CACTTCTTTACCTTGGCGCTAC 59.584 50.000 7.64 0.00 0.00 3.58
2175 2315 6.562518 AGGCTATAGACTCGTTTAACACTTC 58.437 40.000 0.83 0.00 0.00 3.01
2176 2316 6.527057 AGGCTATAGACTCGTTTAACACTT 57.473 37.500 0.83 0.00 0.00 3.16
2177 2317 6.238703 GCTAGGCTATAGACTCGTTTAACACT 60.239 42.308 12.64 0.00 33.72 3.55
2178 2318 5.914074 GCTAGGCTATAGACTCGTTTAACAC 59.086 44.000 12.64 0.00 33.72 3.32
2179 2319 5.009410 GGCTAGGCTATAGACTCGTTTAACA 59.991 44.000 12.64 0.00 33.72 2.41
2180 2320 5.459768 GGCTAGGCTATAGACTCGTTTAAC 58.540 45.833 12.64 0.00 33.72 2.01
2181 2321 4.522022 GGGCTAGGCTATAGACTCGTTTAA 59.478 45.833 12.64 0.00 33.72 1.52
2182 2322 4.077822 GGGCTAGGCTATAGACTCGTTTA 58.922 47.826 12.64 0.00 33.72 2.01
2183 2323 2.892215 GGGCTAGGCTATAGACTCGTTT 59.108 50.000 12.64 0.00 33.72 3.60
2184 2324 2.108601 AGGGCTAGGCTATAGACTCGTT 59.891 50.000 12.64 0.00 33.72 3.85
2185 2325 1.706305 AGGGCTAGGCTATAGACTCGT 59.294 52.381 12.64 0.00 33.72 4.18
2186 2326 2.500392 AGGGCTAGGCTATAGACTCG 57.500 55.000 12.64 7.13 33.72 4.18
2187 2327 4.847990 TCTAGGGCTAGGCTATAGACTC 57.152 50.000 12.64 0.00 33.72 3.36
2188 2328 5.015817 ACAATCTAGGGCTAGGCTATAGACT 59.984 44.000 23.97 13.94 37.13 3.24
2189 2329 5.265989 ACAATCTAGGGCTAGGCTATAGAC 58.734 45.833 23.97 0.00 32.10 2.59
2190 2330 5.538082 ACAATCTAGGGCTAGGCTATAGA 57.462 43.478 23.81 23.81 33.13 1.98
2191 2331 6.322712 CCTAACAATCTAGGGCTAGGCTATAG 59.677 46.154 16.80 17.15 35.67 1.31
2192 2332 6.011007 TCCTAACAATCTAGGGCTAGGCTATA 60.011 42.308 16.80 8.70 39.26 1.31
2193 2333 5.026790 CCTAACAATCTAGGGCTAGGCTAT 58.973 45.833 16.80 7.96 35.67 2.97
2194 2334 4.107473 TCCTAACAATCTAGGGCTAGGCTA 59.893 45.833 16.80 5.85 39.26 3.93
2195 2335 3.116707 TCCTAACAATCTAGGGCTAGGCT 60.117 47.826 16.80 4.94 39.26 4.58
2196 2336 3.240302 TCCTAACAATCTAGGGCTAGGC 58.760 50.000 8.00 8.00 39.26 3.93
2197 2337 5.087323 TGATCCTAACAATCTAGGGCTAGG 58.913 45.833 0.00 0.00 39.26 3.02
2198 2338 5.337169 GCTGATCCTAACAATCTAGGGCTAG 60.337 48.000 0.00 0.00 39.26 3.42
2199 2339 4.528596 GCTGATCCTAACAATCTAGGGCTA 59.471 45.833 0.00 0.00 39.26 3.93
2200 2340 3.326297 GCTGATCCTAACAATCTAGGGCT 59.674 47.826 0.00 0.00 39.26 5.19
2201 2341 3.326297 AGCTGATCCTAACAATCTAGGGC 59.674 47.826 0.00 0.00 39.26 5.19
2202 2342 4.321601 CGAGCTGATCCTAACAATCTAGGG 60.322 50.000 0.00 0.00 39.26 3.53
2203 2343 4.279671 ACGAGCTGATCCTAACAATCTAGG 59.720 45.833 0.00 0.00 40.03 3.02
2204 2344 5.218885 CACGAGCTGATCCTAACAATCTAG 58.781 45.833 0.00 0.00 0.00 2.43
2205 2345 4.038042 CCACGAGCTGATCCTAACAATCTA 59.962 45.833 0.00 0.00 0.00 1.98
2206 2346 3.181471 CCACGAGCTGATCCTAACAATCT 60.181 47.826 0.00 0.00 0.00 2.40
2207 2347 3.126831 CCACGAGCTGATCCTAACAATC 58.873 50.000 0.00 0.00 0.00 2.67
2208 2348 2.501723 ACCACGAGCTGATCCTAACAAT 59.498 45.455 0.00 0.00 0.00 2.71
2209 2349 1.899814 ACCACGAGCTGATCCTAACAA 59.100 47.619 0.00 0.00 0.00 2.83
2210 2350 1.557099 ACCACGAGCTGATCCTAACA 58.443 50.000 0.00 0.00 0.00 2.41
2211 2351 2.271800 CAACCACGAGCTGATCCTAAC 58.728 52.381 0.00 0.00 0.00 2.34
2212 2352 1.899814 ACAACCACGAGCTGATCCTAA 59.100 47.619 0.00 0.00 0.00 2.69
2213 2353 1.557099 ACAACCACGAGCTGATCCTA 58.443 50.000 0.00 0.00 0.00 2.94
2214 2354 1.478510 CTACAACCACGAGCTGATCCT 59.521 52.381 0.00 0.00 0.00 3.24
2215 2355 1.476891 TCTACAACCACGAGCTGATCC 59.523 52.381 0.00 0.00 0.00 3.36
2216 2356 2.941453 TCTACAACCACGAGCTGATC 57.059 50.000 0.00 0.00 0.00 2.92
2217 2357 5.339008 TTTATCTACAACCACGAGCTGAT 57.661 39.130 0.00 0.00 0.00 2.90
2218 2358 4.794278 TTTATCTACAACCACGAGCTGA 57.206 40.909 0.00 0.00 0.00 4.26
2219 2359 4.508124 GGATTTATCTACAACCACGAGCTG 59.492 45.833 0.00 0.00 0.00 4.24
2220 2360 4.406003 AGGATTTATCTACAACCACGAGCT 59.594 41.667 0.00 0.00 0.00 4.09
2221 2361 4.694339 AGGATTTATCTACAACCACGAGC 58.306 43.478 0.00 0.00 0.00 5.03
2222 2362 7.435488 CAGTTAGGATTTATCTACAACCACGAG 59.565 40.741 0.00 0.00 0.00 4.18
2223 2363 7.262772 CAGTTAGGATTTATCTACAACCACGA 58.737 38.462 0.00 0.00 0.00 4.35
2224 2364 6.479001 CCAGTTAGGATTTATCTACAACCACG 59.521 42.308 0.00 0.00 41.22 4.94
2225 2365 7.562135 TCCAGTTAGGATTTATCTACAACCAC 58.438 38.462 0.00 0.00 43.07 4.16
2226 2366 7.743116 TCCAGTTAGGATTTATCTACAACCA 57.257 36.000 0.00 0.00 43.07 3.67
2241 2381 7.067008 CAGGGTACAAAATACAATCCAGTTAGG 59.933 40.741 0.00 0.00 39.47 2.69
2242 2382 7.415206 GCAGGGTACAAAATACAATCCAGTTAG 60.415 40.741 0.00 0.00 0.00 2.34
2243 2383 6.376018 GCAGGGTACAAAATACAATCCAGTTA 59.624 38.462 0.00 0.00 0.00 2.24
2244 2384 5.185056 GCAGGGTACAAAATACAATCCAGTT 59.815 40.000 0.00 0.00 0.00 3.16
2245 2385 4.705023 GCAGGGTACAAAATACAATCCAGT 59.295 41.667 0.00 0.00 0.00 4.00
2246 2386 4.097892 GGCAGGGTACAAAATACAATCCAG 59.902 45.833 0.00 0.00 0.00 3.86
2247 2387 4.020543 GGCAGGGTACAAAATACAATCCA 58.979 43.478 0.00 0.00 0.00 3.41
2248 2388 4.097892 CAGGCAGGGTACAAAATACAATCC 59.902 45.833 0.00 0.00 0.00 3.01
2249 2389 4.947388 TCAGGCAGGGTACAAAATACAATC 59.053 41.667 0.00 0.00 0.00 2.67
2250 2390 4.929479 TCAGGCAGGGTACAAAATACAAT 58.071 39.130 0.00 0.00 0.00 2.71
2251 2391 4.202524 ACTCAGGCAGGGTACAAAATACAA 60.203 41.667 0.00 0.00 0.00 2.41
2252 2392 3.329520 ACTCAGGCAGGGTACAAAATACA 59.670 43.478 0.00 0.00 0.00 2.29
2253 2393 3.951663 ACTCAGGCAGGGTACAAAATAC 58.048 45.455 0.00 0.00 0.00 1.89
2254 2394 5.968676 ATACTCAGGCAGGGTACAAAATA 57.031 39.130 0.00 0.00 0.00 1.40
2255 2395 4.862641 ATACTCAGGCAGGGTACAAAAT 57.137 40.909 0.00 0.00 0.00 1.82
2256 2396 5.765576 TTATACTCAGGCAGGGTACAAAA 57.234 39.130 0.00 0.00 0.00 2.44
2257 2397 5.765576 TTTATACTCAGGCAGGGTACAAA 57.234 39.130 0.00 0.00 0.00 2.83
2258 2398 5.397447 CCATTTATACTCAGGCAGGGTACAA 60.397 44.000 0.00 0.00 0.00 2.41
2259 2399 4.102524 CCATTTATACTCAGGCAGGGTACA 59.897 45.833 0.00 0.00 0.00 2.90
2260 2400 4.347000 TCCATTTATACTCAGGCAGGGTAC 59.653 45.833 0.00 0.00 0.00 3.34
2261 2401 4.562767 TCCATTTATACTCAGGCAGGGTA 58.437 43.478 0.00 0.00 0.00 3.69
2262 2402 3.393687 TCCATTTATACTCAGGCAGGGT 58.606 45.455 0.00 0.00 0.00 4.34
2263 2403 4.392940 CTTCCATTTATACTCAGGCAGGG 58.607 47.826 0.00 0.00 0.00 4.45
2264 2404 4.392940 CCTTCCATTTATACTCAGGCAGG 58.607 47.826 0.00 0.00 0.00 4.85
2265 2405 3.817647 GCCTTCCATTTATACTCAGGCAG 59.182 47.826 2.36 0.00 44.10 4.85
2266 2406 3.820557 GCCTTCCATTTATACTCAGGCA 58.179 45.455 2.36 0.00 44.10 4.75
2267 2407 3.820557 TGCCTTCCATTTATACTCAGGC 58.179 45.455 0.00 0.00 44.79 4.85
2268 2408 4.823989 CCTTGCCTTCCATTTATACTCAGG 59.176 45.833 0.00 0.00 0.00 3.86
2269 2409 4.276926 GCCTTGCCTTCCATTTATACTCAG 59.723 45.833 0.00 0.00 0.00 3.35
2270 2410 4.207165 GCCTTGCCTTCCATTTATACTCA 58.793 43.478 0.00 0.00 0.00 3.41
2271 2411 3.570125 GGCCTTGCCTTCCATTTATACTC 59.430 47.826 0.00 0.00 46.69 2.59
2272 2412 3.566351 GGCCTTGCCTTCCATTTATACT 58.434 45.455 0.00 0.00 46.69 2.12
2287 2427 0.740149 TGATTTATGCGCAGGCCTTG 59.260 50.000 18.32 0.00 38.85 3.61
2288 2428 1.027357 CTGATTTATGCGCAGGCCTT 58.973 50.000 18.32 0.00 38.85 4.35
2289 2429 0.820891 CCTGATTTATGCGCAGGCCT 60.821 55.000 18.32 0.00 42.30 5.19
2290 2430 1.656441 CCTGATTTATGCGCAGGCC 59.344 57.895 18.32 0.00 42.30 5.19
2291 2431 1.656441 CCCTGATTTATGCGCAGGC 59.344 57.895 18.32 3.43 46.11 4.85
2292 2432 1.102809 TGCCCTGATTTATGCGCAGG 61.103 55.000 18.32 10.19 46.83 4.85
2293 2433 0.740149 TTGCCCTGATTTATGCGCAG 59.260 50.000 18.32 0.00 0.00 5.18
2294 2434 1.401761 ATTGCCCTGATTTATGCGCA 58.598 45.000 14.96 14.96 0.00 6.09
2295 2435 2.223782 TGAATTGCCCTGATTTATGCGC 60.224 45.455 0.00 0.00 0.00 6.09
2296 2436 3.713858 TGAATTGCCCTGATTTATGCG 57.286 42.857 0.00 0.00 0.00 4.73
2297 2437 4.992951 GGAATGAATTGCCCTGATTTATGC 59.007 41.667 0.00 0.00 0.00 3.14
2298 2438 6.415206 AGGAATGAATTGCCCTGATTTATG 57.585 37.500 0.00 0.00 0.00 1.90
2299 2439 6.842807 AGAAGGAATGAATTGCCCTGATTTAT 59.157 34.615 0.00 0.00 0.00 1.40
2300 2440 6.097270 CAGAAGGAATGAATTGCCCTGATTTA 59.903 38.462 8.06 0.00 34.03 1.40
2301 2441 5.028131 AGAAGGAATGAATTGCCCTGATTT 58.972 37.500 0.00 0.00 0.00 2.17
2302 2442 4.404715 CAGAAGGAATGAATTGCCCTGATT 59.595 41.667 8.06 0.00 34.03 2.57
2303 2443 3.958798 CAGAAGGAATGAATTGCCCTGAT 59.041 43.478 8.06 0.00 34.03 2.90
2304 2444 3.010472 TCAGAAGGAATGAATTGCCCTGA 59.990 43.478 10.84 10.84 36.64 3.86
2305 2445 3.129988 GTCAGAAGGAATGAATTGCCCTG 59.870 47.826 7.67 7.67 33.72 4.45
2306 2446 3.011032 AGTCAGAAGGAATGAATTGCCCT 59.989 43.478 0.00 0.00 0.00 5.19
2307 2447 3.359950 AGTCAGAAGGAATGAATTGCCC 58.640 45.455 0.00 0.00 0.00 5.36
2308 2448 5.431765 TCTAGTCAGAAGGAATGAATTGCC 58.568 41.667 0.00 0.00 0.00 4.52
2309 2449 6.992063 TTCTAGTCAGAAGGAATGAATTGC 57.008 37.500 0.00 0.00 35.82 3.56
2321 2461 2.486982 CGGTCGAACCTTCTAGTCAGAA 59.513 50.000 0.00 0.00 39.03 3.02
2322 2462 2.082231 CGGTCGAACCTTCTAGTCAGA 58.918 52.381 0.00 0.00 35.66 3.27
2323 2463 1.811359 ACGGTCGAACCTTCTAGTCAG 59.189 52.381 0.00 0.00 35.66 3.51
2324 2464 1.901591 ACGGTCGAACCTTCTAGTCA 58.098 50.000 0.00 0.00 35.66 3.41
2325 2465 2.861286 GAACGGTCGAACCTTCTAGTC 58.139 52.381 5.10 0.00 35.66 2.59
2369 2510 5.928839 TCTCAGCTTGTCAGTTCAATTCTAC 59.071 40.000 0.00 0.00 0.00 2.59
2373 2514 4.070716 CCTCTCAGCTTGTCAGTTCAATT 58.929 43.478 0.00 0.00 0.00 2.32
2511 2967 5.695851 AGACAATCTGCCTTACAAAGTTG 57.304 39.130 0.00 0.00 0.00 3.16
2595 3084 8.730680 CCGCAGCATCCTTTATATAAGTAATTT 58.269 33.333 0.00 0.00 0.00 1.82
2604 3093 1.826385 GCCCGCAGCATCCTTTATAT 58.174 50.000 0.00 0.00 42.97 0.86
2642 3157 3.135167 TCCCCGCGGAGAATTACTTTTAT 59.865 43.478 30.73 0.00 32.86 1.40
2727 3427 2.573340 GCATTTGTGGCCCTTCGG 59.427 61.111 0.00 0.00 0.00 4.30
2749 3449 2.224606 CCATACATCGATGCAAAGGCT 58.775 47.619 25.11 6.49 41.91 4.58
2868 3568 8.779603 TTTTTACCGGTAAAAATTACTTCACG 57.220 30.769 41.40 1.50 44.98 4.35
2916 3616 6.263344 CGATCTTCAAGCATTCAACAATGAT 58.737 36.000 0.00 0.00 41.97 2.45
2919 3619 4.676196 GCCGATCTTCAAGCATTCAACAAT 60.676 41.667 0.00 0.00 0.00 2.71
3048 3748 6.901300 AGAGAGATTGGGTTGGTACATTACTA 59.099 38.462 0.00 0.00 39.30 1.82
3061 3761 6.627087 TGTATGAGAAAAGAGAGATTGGGT 57.373 37.500 0.00 0.00 0.00 4.51
3062 3762 7.334090 TCTTGTATGAGAAAAGAGAGATTGGG 58.666 38.462 0.00 0.00 0.00 4.12
3090 3793 7.016153 TCAAGAAATAGCAGTTTCCCTAAGA 57.984 36.000 9.41 1.07 38.55 2.10
3093 3796 5.045578 AGCTCAAGAAATAGCAGTTTCCCTA 60.046 40.000 9.41 0.00 41.32 3.53
3098 3801 4.614535 CGCAAGCTCAAGAAATAGCAGTTT 60.615 41.667 0.00 0.00 41.32 2.66
3102 3805 2.426522 ACGCAAGCTCAAGAAATAGCA 58.573 42.857 0.00 0.00 41.32 3.49
3104 3807 3.189287 ACCAACGCAAGCTCAAGAAATAG 59.811 43.478 0.00 0.00 45.62 1.73
3108 3811 1.388547 AACCAACGCAAGCTCAAGAA 58.611 45.000 0.00 0.00 45.62 2.52
3109 3812 1.388547 AAACCAACGCAAGCTCAAGA 58.611 45.000 0.00 0.00 45.62 3.02
3110 3813 2.208326 AAAACCAACGCAAGCTCAAG 57.792 45.000 0.00 0.00 45.62 3.02
3111 3814 2.663826 AAAAACCAACGCAAGCTCAA 57.336 40.000 0.00 0.00 45.62 3.02
3135 4586 3.570975 TGCTGCATCACATGTTTCTCTTT 59.429 39.130 0.00 0.00 0.00 2.52
3136 4587 3.151554 TGCTGCATCACATGTTTCTCTT 58.848 40.909 0.00 0.00 0.00 2.85
3138 4589 3.564235 TTGCTGCATCACATGTTTCTC 57.436 42.857 1.84 0.00 0.00 2.87
3140 4591 3.645884 ACTTTGCTGCATCACATGTTTC 58.354 40.909 1.84 0.00 0.00 2.78
3141 4592 3.738830 ACTTTGCTGCATCACATGTTT 57.261 38.095 1.84 0.00 0.00 2.83
3143 4594 4.852134 TTTACTTTGCTGCATCACATGT 57.148 36.364 1.84 0.00 0.00 3.21
3145 4596 8.090214 ACTTATTTTTACTTTGCTGCATCACAT 58.910 29.630 1.84 0.00 0.00 3.21
3146 4597 7.432869 ACTTATTTTTACTTTGCTGCATCACA 58.567 30.769 1.84 0.00 0.00 3.58
3147 4598 7.873739 ACTTATTTTTACTTTGCTGCATCAC 57.126 32.000 1.84 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.