Multiple sequence alignment - TraesCS7A01G328700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G328700 chr7A 100.000 2714 0 0 1 2714 478155115 478157828 0.000000e+00 5012
1 TraesCS7A01G328700 chr7D 96.057 1344 40 5 497 1827 416021370 416022713 0.000000e+00 2176
2 TraesCS7A01G328700 chr7D 85.691 622 47 9 1828 2428 416024687 416025287 3.840000e-173 617
3 TraesCS7A01G328700 chr7D 88.342 386 34 7 1 384 416005328 416005704 1.150000e-123 453
4 TraesCS7A01G328700 chr7D 92.531 241 18 0 2474 2714 416138948 416139188 2.000000e-91 346
5 TraesCS7A01G328700 chr7B 95.277 1355 41 6 562 1915 431399185 431400517 0.000000e+00 2126
6 TraesCS7A01G328700 chr7B 92.821 390 28 0 2325 2714 431400931 431401320 1.410000e-157 566
7 TraesCS7A01G328700 chr7B 88.352 352 36 3 1 349 431385363 431385712 4.180000e-113 418
8 TraesCS7A01G328700 chr7B 83.690 374 40 7 1917 2287 431400578 431400933 1.560000e-87 333
9 TraesCS7A01G328700 chr2B 80.805 646 107 11 1946 2578 643492066 643492707 8.730000e-135 490
10 TraesCS7A01G328700 chr2B 80.186 646 111 11 1946 2578 643444173 643444814 4.090000e-128 468
11 TraesCS7A01G328700 chr2B 80.062 647 112 11 1946 2578 643390419 643391062 5.290000e-127 464
12 TraesCS7A01G328700 chr1B 83.469 369 54 5 2121 2486 549733074 549733438 1.200000e-88 337
13 TraesCS7A01G328700 chr4D 81.877 309 56 0 2387 2695 434346511 434346819 7.450000e-66 261
14 TraesCS7A01G328700 chr2D 80.795 151 29 0 2427 2577 12397417 12397567 4.750000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G328700 chr7A 478155115 478157828 2713 False 5012.000000 5012 100.000 1 2714 1 chr7A.!!$F1 2713
1 TraesCS7A01G328700 chr7D 416021370 416025287 3917 False 1396.500000 2176 90.874 497 2428 2 chr7D.!!$F3 1931
2 TraesCS7A01G328700 chr7B 431399185 431401320 2135 False 1008.333333 2126 90.596 562 2714 3 chr7B.!!$F2 2152
3 TraesCS7A01G328700 chr2B 643492066 643492707 641 False 490.000000 490 80.805 1946 2578 1 chr2B.!!$F3 632
4 TraesCS7A01G328700 chr2B 643444173 643444814 641 False 468.000000 468 80.186 1946 2578 1 chr2B.!!$F2 632
5 TraesCS7A01G328700 chr2B 643390419 643391062 643 False 464.000000 464 80.062 1946 2578 1 chr2B.!!$F1 632

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
253 254 0.032912 TGGAGGTATACAGCCGTGGA 60.033 55.0 5.01 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1889 3876 0.831711 GGGGCTTGCTCCCTTTTTCA 60.832 55.0 0.0 0.0 45.8 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.671279 TCATGTAGGAATTATATAATGTGCCTG 57.329 33.333 22.67 13.60 0.00 4.85
37 38 9.453572 CATGTAGGAATTATATAATGTGCCTGT 57.546 33.333 22.67 12.85 0.00 4.00
52 53 8.846943 AATGTGCCTGTATATATTGATCGAAA 57.153 30.769 0.00 0.00 0.00 3.46
53 54 7.889589 TGTGCCTGTATATATTGATCGAAAG 57.110 36.000 0.00 0.00 0.00 2.62
54 55 6.368791 TGTGCCTGTATATATTGATCGAAAGC 59.631 38.462 0.00 0.00 0.00 3.51
55 56 5.874810 TGCCTGTATATATTGATCGAAAGCC 59.125 40.000 0.00 0.00 0.00 4.35
56 57 5.294552 GCCTGTATATATTGATCGAAAGCCC 59.705 44.000 0.00 0.00 0.00 5.19
57 58 6.406370 CCTGTATATATTGATCGAAAGCCCA 58.594 40.000 0.00 0.00 0.00 5.36
58 59 7.050377 CCTGTATATATTGATCGAAAGCCCAT 58.950 38.462 0.00 0.00 0.00 4.00
59 60 7.554118 CCTGTATATATTGATCGAAAGCCCATT 59.446 37.037 0.00 0.00 0.00 3.16
60 61 9.599866 CTGTATATATTGATCGAAAGCCCATTA 57.400 33.333 0.00 0.00 0.00 1.90
64 65 9.685276 ATATATTGATCGAAAGCCCATTATTGA 57.315 29.630 0.00 0.00 0.00 2.57
65 66 5.499139 TTGATCGAAAGCCCATTATTGAC 57.501 39.130 0.00 0.00 0.00 3.18
66 67 4.780815 TGATCGAAAGCCCATTATTGACT 58.219 39.130 0.00 0.00 0.00 3.41
67 68 5.924356 TGATCGAAAGCCCATTATTGACTA 58.076 37.500 0.00 0.00 0.00 2.59
68 69 5.991606 TGATCGAAAGCCCATTATTGACTAG 59.008 40.000 0.00 0.00 0.00 2.57
69 70 5.353394 TCGAAAGCCCATTATTGACTAGT 57.647 39.130 0.00 0.00 0.00 2.57
70 71 5.116180 TCGAAAGCCCATTATTGACTAGTG 58.884 41.667 0.00 0.00 0.00 2.74
71 72 4.273480 CGAAAGCCCATTATTGACTAGTGG 59.727 45.833 0.00 0.00 37.05 4.00
72 73 3.214696 AGCCCATTATTGACTAGTGGC 57.785 47.619 0.00 4.06 36.20 5.01
73 74 2.509548 AGCCCATTATTGACTAGTGGCA 59.490 45.455 16.32 0.19 36.20 4.92
74 75 3.053693 AGCCCATTATTGACTAGTGGCAA 60.054 43.478 16.32 8.96 36.20 4.52
75 76 3.699038 GCCCATTATTGACTAGTGGCAAA 59.301 43.478 0.00 0.00 36.20 3.68
76 77 4.159506 GCCCATTATTGACTAGTGGCAAAA 59.840 41.667 0.00 0.00 36.20 2.44
77 78 5.679638 GCCCATTATTGACTAGTGGCAAAAG 60.680 44.000 0.00 0.00 36.20 2.27
78 79 5.652014 CCCATTATTGACTAGTGGCAAAAGA 59.348 40.000 0.00 0.00 36.20 2.52
79 80 6.152661 CCCATTATTGACTAGTGGCAAAAGAA 59.847 38.462 0.00 0.00 36.20 2.52
80 81 7.253422 CCATTATTGACTAGTGGCAAAAGAAG 58.747 38.462 0.00 0.00 31.24 2.85
81 82 7.121168 CCATTATTGACTAGTGGCAAAAGAAGA 59.879 37.037 0.00 0.00 31.24 2.87
82 83 8.514594 CATTATTGACTAGTGGCAAAAGAAGAA 58.485 33.333 0.00 0.00 0.00 2.52
83 84 6.566197 ATTGACTAGTGGCAAAAGAAGAAG 57.434 37.500 0.00 0.00 0.00 2.85
84 85 5.290493 TGACTAGTGGCAAAAGAAGAAGA 57.710 39.130 0.00 0.00 0.00 2.87
85 86 5.680619 TGACTAGTGGCAAAAGAAGAAGAA 58.319 37.500 0.00 0.00 0.00 2.52
86 87 6.119536 TGACTAGTGGCAAAAGAAGAAGAAA 58.880 36.000 0.00 0.00 0.00 2.52
87 88 6.601613 TGACTAGTGGCAAAAGAAGAAGAAAA 59.398 34.615 0.00 0.00 0.00 2.29
88 89 7.285401 TGACTAGTGGCAAAAGAAGAAGAAAAT 59.715 33.333 0.00 0.00 0.00 1.82
89 90 7.652727 ACTAGTGGCAAAAGAAGAAGAAAATC 58.347 34.615 0.00 0.00 0.00 2.17
90 91 6.469782 AGTGGCAAAAGAAGAAGAAAATCA 57.530 33.333 0.00 0.00 0.00 2.57
91 92 6.877236 AGTGGCAAAAGAAGAAGAAAATCAA 58.123 32.000 0.00 0.00 0.00 2.57
92 93 6.758416 AGTGGCAAAAGAAGAAGAAAATCAAC 59.242 34.615 0.00 0.00 0.00 3.18
93 94 6.758416 GTGGCAAAAGAAGAAGAAAATCAACT 59.242 34.615 0.00 0.00 0.00 3.16
94 95 7.278646 GTGGCAAAAGAAGAAGAAAATCAACTT 59.721 33.333 0.00 0.00 0.00 2.66
95 96 7.278424 TGGCAAAAGAAGAAGAAAATCAACTTG 59.722 33.333 0.00 0.00 0.00 3.16
96 97 7.254556 GGCAAAAGAAGAAGAAAATCAACTTGG 60.255 37.037 0.00 0.00 0.00 3.61
97 98 7.624661 CAAAAGAAGAAGAAAATCAACTTGGC 58.375 34.615 0.00 0.00 0.00 4.52
98 99 5.113502 AGAAGAAGAAAATCAACTTGGCG 57.886 39.130 0.00 0.00 0.00 5.69
99 100 3.288809 AGAAGAAAATCAACTTGGCGC 57.711 42.857 0.00 0.00 0.00 6.53
100 101 2.622942 AGAAGAAAATCAACTTGGCGCA 59.377 40.909 10.83 0.00 0.00 6.09
101 102 3.256631 AGAAGAAAATCAACTTGGCGCAT 59.743 39.130 10.83 0.00 0.00 4.73
102 103 2.950433 AGAAAATCAACTTGGCGCATG 58.050 42.857 10.83 0.00 0.00 4.06
103 104 1.994779 GAAAATCAACTTGGCGCATGG 59.005 47.619 10.83 0.00 0.00 3.66
104 105 1.255882 AAATCAACTTGGCGCATGGA 58.744 45.000 10.83 0.00 0.00 3.41
105 106 0.527565 AATCAACTTGGCGCATGGAC 59.472 50.000 10.83 0.00 0.00 4.02
106 107 1.647545 ATCAACTTGGCGCATGGACG 61.648 55.000 10.83 0.00 0.00 4.79
107 108 2.031919 AACTTGGCGCATGGACGA 59.968 55.556 10.83 0.00 34.06 4.20
108 109 2.325082 AACTTGGCGCATGGACGAC 61.325 57.895 10.83 0.00 43.05 4.34
109 110 3.853330 CTTGGCGCATGGACGACG 61.853 66.667 10.83 0.00 46.80 5.12
110 111 4.673298 TTGGCGCATGGACGACGT 62.673 61.111 10.83 0.00 46.80 4.34
111 112 3.284133 TTGGCGCATGGACGACGTA 62.284 57.895 10.83 0.00 46.80 3.57
112 113 3.252484 GGCGCATGGACGACGTAC 61.252 66.667 10.83 2.34 34.06 3.67
113 114 2.505337 GCGCATGGACGACGTACA 60.505 61.111 16.66 16.66 34.06 2.90
114 115 2.089936 GCGCATGGACGACGTACAA 61.090 57.895 18.40 0.48 34.06 2.41
115 116 1.418342 GCGCATGGACGACGTACAAT 61.418 55.000 18.40 3.12 34.06 2.71
116 117 0.297525 CGCATGGACGACGTACAATG 59.702 55.000 18.40 15.99 34.06 2.82
117 118 0.650512 GCATGGACGACGTACAATGG 59.349 55.000 18.40 10.97 26.61 3.16
118 119 0.650512 CATGGACGACGTACAATGGC 59.349 55.000 18.40 0.00 26.61 4.40
119 120 0.461339 ATGGACGACGTACAATGGCC 60.461 55.000 18.40 4.76 26.61 5.36
120 121 1.079681 GGACGACGTACAATGGCCA 60.080 57.895 8.56 8.56 0.00 5.36
121 122 1.082117 GGACGACGTACAATGGCCAG 61.082 60.000 13.05 0.00 0.00 4.85
122 123 1.079405 ACGACGTACAATGGCCAGG 60.079 57.895 13.05 8.83 0.00 4.45
123 124 1.813753 CGACGTACAATGGCCAGGG 60.814 63.158 13.05 8.41 0.00 4.45
124 125 2.045340 ACGTACAATGGCCAGGGC 60.045 61.111 13.05 5.91 41.06 5.19
125 126 2.045438 CGTACAATGGCCAGGGCA 60.045 61.111 19.93 19.93 44.11 5.36
126 127 1.677300 CGTACAATGGCCAGGGCAA 60.677 57.895 21.65 4.69 42.43 4.52
127 128 1.247419 CGTACAATGGCCAGGGCAAA 61.247 55.000 21.65 3.67 42.43 3.68
128 129 0.246360 GTACAATGGCCAGGGCAAAC 59.754 55.000 21.65 12.07 42.43 2.93
129 130 0.178950 TACAATGGCCAGGGCAAACA 60.179 50.000 21.65 5.18 42.43 2.83
130 131 1.294138 CAATGGCCAGGGCAAACAG 59.706 57.895 21.65 6.38 42.43 3.16
131 132 2.586293 AATGGCCAGGGCAAACAGC 61.586 57.895 21.65 0.00 42.43 4.40
140 141 2.658268 GCAAACAGCCAACGCACC 60.658 61.111 0.00 0.00 37.52 5.01
141 142 2.027460 CAAACAGCCAACGCACCC 59.973 61.111 0.00 0.00 37.52 4.61
142 143 2.441164 AAACAGCCAACGCACCCA 60.441 55.556 0.00 0.00 37.52 4.51
143 144 1.832167 AAACAGCCAACGCACCCAT 60.832 52.632 0.00 0.00 37.52 4.00
144 145 2.086251 AAACAGCCAACGCACCCATG 62.086 55.000 0.00 0.00 37.52 3.66
145 146 3.751246 CAGCCAACGCACCCATGG 61.751 66.667 4.14 4.14 37.52 3.66
163 164 3.142838 CCGGCCTGCTTCCCATTG 61.143 66.667 0.00 0.00 0.00 2.82
164 165 3.830192 CGGCCTGCTTCCCATTGC 61.830 66.667 0.00 0.00 0.00 3.56
165 166 2.363406 GGCCTGCTTCCCATTGCT 60.363 61.111 0.00 0.00 0.00 3.91
166 167 1.076777 GGCCTGCTTCCCATTGCTA 60.077 57.895 0.00 0.00 0.00 3.49
167 168 0.468771 GGCCTGCTTCCCATTGCTAT 60.469 55.000 0.00 0.00 0.00 2.97
168 169 0.957362 GCCTGCTTCCCATTGCTATC 59.043 55.000 0.00 0.00 0.00 2.08
169 170 1.233019 CCTGCTTCCCATTGCTATCG 58.767 55.000 0.00 0.00 0.00 2.92
170 171 1.475751 CCTGCTTCCCATTGCTATCGT 60.476 52.381 0.00 0.00 0.00 3.73
171 172 1.600957 CTGCTTCCCATTGCTATCGTG 59.399 52.381 0.00 0.00 0.00 4.35
172 173 0.947244 GCTTCCCATTGCTATCGTGG 59.053 55.000 0.00 0.00 0.00 4.94
173 174 1.475034 GCTTCCCATTGCTATCGTGGA 60.475 52.381 0.00 0.00 34.94 4.02
174 175 2.811873 GCTTCCCATTGCTATCGTGGAT 60.812 50.000 0.00 0.00 34.94 3.41
175 176 3.480470 CTTCCCATTGCTATCGTGGATT 58.520 45.455 0.00 0.00 34.94 3.01
176 177 2.849942 TCCCATTGCTATCGTGGATTG 58.150 47.619 0.00 0.00 34.94 2.67
177 178 1.267806 CCCATTGCTATCGTGGATTGC 59.732 52.381 5.32 5.32 40.20 3.56
178 179 1.267806 CCATTGCTATCGTGGATTGCC 59.732 52.381 9.01 0.00 39.34 4.52
179 180 2.224606 CATTGCTATCGTGGATTGCCT 58.775 47.619 9.01 0.00 39.34 4.75
180 181 1.667236 TTGCTATCGTGGATTGCCTG 58.333 50.000 9.01 0.00 39.34 4.85
181 182 0.815213 TGCTATCGTGGATTGCCTGC 60.815 55.000 9.01 0.00 39.34 4.85
182 183 1.510480 GCTATCGTGGATTGCCTGCC 61.510 60.000 1.40 0.00 35.44 4.85
183 184 0.886490 CTATCGTGGATTGCCTGCCC 60.886 60.000 0.00 0.00 34.31 5.36
184 185 2.658679 TATCGTGGATTGCCTGCCCG 62.659 60.000 0.00 0.00 34.31 6.13
202 203 3.068691 CCAGGGCGAGTCGAGGAA 61.069 66.667 18.61 0.00 0.00 3.36
203 204 2.646175 CCAGGGCGAGTCGAGGAAA 61.646 63.158 18.61 0.00 0.00 3.13
204 205 1.517832 CAGGGCGAGTCGAGGAAAT 59.482 57.895 18.61 0.00 0.00 2.17
205 206 0.108138 CAGGGCGAGTCGAGGAAATT 60.108 55.000 18.61 0.00 0.00 1.82
206 207 0.175989 AGGGCGAGTCGAGGAAATTC 59.824 55.000 18.61 0.00 0.00 2.17
207 208 1.146358 GGGCGAGTCGAGGAAATTCG 61.146 60.000 18.61 0.00 41.79 3.34
208 209 1.146358 GGCGAGTCGAGGAAATTCGG 61.146 60.000 18.61 0.00 40.83 4.30
209 210 0.179145 GCGAGTCGAGGAAATTCGGA 60.179 55.000 18.61 0.00 40.83 4.55
210 211 1.734707 GCGAGTCGAGGAAATTCGGAA 60.735 52.381 18.61 0.00 40.83 4.30
211 212 2.602878 CGAGTCGAGGAAATTCGGAAA 58.397 47.619 6.73 0.00 40.83 3.13
212 213 3.187700 CGAGTCGAGGAAATTCGGAAAT 58.812 45.455 6.73 0.00 40.83 2.17
213 214 3.000322 CGAGTCGAGGAAATTCGGAAATG 60.000 47.826 6.73 0.00 40.83 2.32
214 215 3.270877 AGTCGAGGAAATTCGGAAATGG 58.729 45.455 0.00 0.00 40.83 3.16
215 216 3.007635 GTCGAGGAAATTCGGAAATGGT 58.992 45.455 0.00 0.00 40.83 3.55
216 217 3.063588 GTCGAGGAAATTCGGAAATGGTC 59.936 47.826 0.00 0.00 40.83 4.02
217 218 3.006940 CGAGGAAATTCGGAAATGGTCA 58.993 45.455 0.00 0.00 36.95 4.02
218 219 3.181510 CGAGGAAATTCGGAAATGGTCAC 60.182 47.826 0.00 0.00 36.95 3.67
219 220 2.747446 AGGAAATTCGGAAATGGTCACG 59.253 45.455 0.00 0.00 0.00 4.35
220 221 2.159435 GGAAATTCGGAAATGGTCACGG 60.159 50.000 0.00 0.00 0.00 4.94
221 222 2.194201 AATTCGGAAATGGTCACGGT 57.806 45.000 0.00 0.00 0.00 4.83
222 223 1.734163 ATTCGGAAATGGTCACGGTC 58.266 50.000 0.00 0.00 0.00 4.79
223 224 0.320946 TTCGGAAATGGTCACGGTCC 60.321 55.000 0.00 0.00 0.00 4.46
224 225 2.098233 CGGAAATGGTCACGGTCCG 61.098 63.158 10.48 10.48 44.60 4.79
225 226 2.396157 GGAAATGGTCACGGTCCGC 61.396 63.158 12.28 0.00 0.00 5.54
226 227 1.375523 GAAATGGTCACGGTCCGCT 60.376 57.895 12.28 0.00 0.00 5.52
227 228 1.359459 GAAATGGTCACGGTCCGCTC 61.359 60.000 12.28 1.60 0.00 5.03
228 229 3.642778 AATGGTCACGGTCCGCTCG 62.643 63.158 12.28 0.00 0.00 5.03
230 231 4.047059 GGTCACGGTCCGCTCGAA 62.047 66.667 12.28 0.00 0.00 3.71
231 232 2.504244 GTCACGGTCCGCTCGAAG 60.504 66.667 12.28 0.00 0.00 3.79
232 233 3.744719 TCACGGTCCGCTCGAAGG 61.745 66.667 12.28 0.40 0.00 3.46
233 234 3.744719 CACGGTCCGCTCGAAGGA 61.745 66.667 12.28 5.28 34.99 3.36
234 235 2.754658 ACGGTCCGCTCGAAGGAT 60.755 61.111 12.28 0.00 40.30 3.24
235 236 2.278857 CGGTCCGCTCGAAGGATG 60.279 66.667 11.82 5.33 40.30 3.51
236 237 2.107141 GGTCCGCTCGAAGGATGG 59.893 66.667 11.82 0.00 40.30 3.51
237 238 2.423898 GGTCCGCTCGAAGGATGGA 61.424 63.158 11.82 0.28 40.30 3.41
238 239 1.066587 GTCCGCTCGAAGGATGGAG 59.933 63.158 11.82 0.00 40.30 3.86
239 240 2.127869 TCCGCTCGAAGGATGGAGG 61.128 63.158 5.28 0.00 32.48 4.30
240 241 2.427245 CCGCTCGAAGGATGGAGGT 61.427 63.158 0.53 0.00 32.48 3.85
241 242 1.107538 CCGCTCGAAGGATGGAGGTA 61.108 60.000 0.53 0.00 32.48 3.08
242 243 0.962489 CGCTCGAAGGATGGAGGTAT 59.038 55.000 0.00 0.00 32.48 2.73
243 244 2.160205 CGCTCGAAGGATGGAGGTATA 58.840 52.381 0.00 0.00 32.48 1.47
244 245 2.095161 CGCTCGAAGGATGGAGGTATAC 60.095 54.545 0.00 0.00 32.48 1.47
245 246 2.891580 GCTCGAAGGATGGAGGTATACA 59.108 50.000 5.01 0.00 32.48 2.29
246 247 3.057174 GCTCGAAGGATGGAGGTATACAG 60.057 52.174 5.01 0.00 32.48 2.74
247 248 2.891580 TCGAAGGATGGAGGTATACAGC 59.108 50.000 5.01 0.00 0.00 4.40
250 251 1.339097 GGATGGAGGTATACAGCCGT 58.661 55.000 5.01 6.45 35.70 5.68
251 252 1.000955 GGATGGAGGTATACAGCCGTG 59.999 57.143 11.43 0.00 35.70 4.94
252 253 1.000955 GATGGAGGTATACAGCCGTGG 59.999 57.143 11.43 0.00 0.00 4.94
253 254 0.032912 TGGAGGTATACAGCCGTGGA 60.033 55.000 5.01 0.00 0.00 4.02
254 255 1.339097 GGAGGTATACAGCCGTGGAT 58.661 55.000 5.01 0.00 0.00 3.41
255 256 1.000955 GGAGGTATACAGCCGTGGATG 59.999 57.143 5.01 1.93 37.56 3.51
256 257 0.393077 AGGTATACAGCCGTGGATGC 59.607 55.000 3.64 0.00 34.49 3.91
257 258 0.105964 GGTATACAGCCGTGGATGCA 59.894 55.000 3.64 0.00 31.25 3.96
258 259 1.270839 GGTATACAGCCGTGGATGCAT 60.271 52.381 0.00 0.00 31.25 3.96
259 260 2.069273 GTATACAGCCGTGGATGCATC 58.931 52.381 18.81 18.81 34.49 3.91
260 261 0.761187 ATACAGCCGTGGATGCATCT 59.239 50.000 25.28 6.36 34.49 2.90
261 262 1.408969 TACAGCCGTGGATGCATCTA 58.591 50.000 25.28 17.90 34.49 1.98
262 263 0.105593 ACAGCCGTGGATGCATCTAG 59.894 55.000 25.28 16.03 34.49 2.43
263 264 1.070445 AGCCGTGGATGCATCTAGC 59.930 57.895 25.28 19.27 45.96 3.42
264 265 1.070445 GCCGTGGATGCATCTAGCT 59.930 57.895 25.28 0.00 45.94 3.32
265 266 0.533755 GCCGTGGATGCATCTAGCTT 60.534 55.000 25.28 0.00 45.94 3.74
266 267 1.506493 CCGTGGATGCATCTAGCTTC 58.494 55.000 25.28 8.88 45.94 3.86
273 274 2.229675 TGCATCTAGCTTCCACATCG 57.770 50.000 0.00 0.00 45.94 3.84
274 275 1.756538 TGCATCTAGCTTCCACATCGA 59.243 47.619 0.00 0.00 45.94 3.59
275 276 2.366590 TGCATCTAGCTTCCACATCGAT 59.633 45.455 0.00 0.00 45.94 3.59
276 277 2.992543 GCATCTAGCTTCCACATCGATC 59.007 50.000 0.00 0.00 41.15 3.69
277 278 3.305950 GCATCTAGCTTCCACATCGATCT 60.306 47.826 0.00 0.00 41.15 2.75
278 279 4.798924 GCATCTAGCTTCCACATCGATCTT 60.799 45.833 0.00 0.00 41.15 2.40
279 280 4.313277 TCTAGCTTCCACATCGATCTTG 57.687 45.455 0.00 0.00 0.00 3.02
280 281 3.954258 TCTAGCTTCCACATCGATCTTGA 59.046 43.478 0.00 0.00 0.00 3.02
281 282 3.834489 AGCTTCCACATCGATCTTGAT 57.166 42.857 0.00 0.00 0.00 2.57
282 283 3.726607 AGCTTCCACATCGATCTTGATC 58.273 45.455 0.00 0.78 0.00 2.92
283 284 3.133542 AGCTTCCACATCGATCTTGATCA 59.866 43.478 10.69 0.00 0.00 2.92
284 285 3.873361 GCTTCCACATCGATCTTGATCAA 59.127 43.478 8.12 8.12 0.00 2.57
285 286 4.025061 GCTTCCACATCGATCTTGATCAAG 60.025 45.833 26.56 26.56 39.71 3.02
286 287 4.743057 TCCACATCGATCTTGATCAAGT 57.257 40.909 29.80 19.39 39.38 3.16
287 288 4.436332 TCCACATCGATCTTGATCAAGTG 58.564 43.478 29.80 23.03 39.38 3.16
288 289 3.002042 CCACATCGATCTTGATCAAGTGC 59.998 47.826 29.80 22.00 39.38 4.40
289 290 3.619929 CACATCGATCTTGATCAAGTGCA 59.380 43.478 29.80 15.22 39.38 4.57
290 291 4.093850 CACATCGATCTTGATCAAGTGCAA 59.906 41.667 29.80 14.89 39.38 4.08
291 292 4.880120 ACATCGATCTTGATCAAGTGCAAT 59.120 37.500 29.80 18.57 39.38 3.56
292 293 5.007430 ACATCGATCTTGATCAAGTGCAATC 59.993 40.000 29.80 23.48 39.38 2.67
293 294 3.553105 TCGATCTTGATCAAGTGCAATCG 59.447 43.478 31.64 31.64 40.10 3.34
294 295 3.308053 CGATCTTGATCAAGTGCAATCGT 59.692 43.478 30.35 14.32 37.01 3.73
295 296 4.549680 CGATCTTGATCAAGTGCAATCGTC 60.550 45.833 30.35 18.54 37.01 4.20
296 297 3.930336 TCTTGATCAAGTGCAATCGTCT 58.070 40.909 29.80 0.00 39.38 4.18
297 298 3.681417 TCTTGATCAAGTGCAATCGTCTG 59.319 43.478 29.80 5.85 39.38 3.51
298 299 2.349590 TGATCAAGTGCAATCGTCTGG 58.650 47.619 0.00 0.00 0.00 3.86
299 300 2.028203 TGATCAAGTGCAATCGTCTGGA 60.028 45.455 0.00 0.00 0.00 3.86
300 301 2.084610 TCAAGTGCAATCGTCTGGAG 57.915 50.000 0.00 0.00 0.00 3.86
301 302 1.618343 TCAAGTGCAATCGTCTGGAGA 59.382 47.619 0.00 0.00 0.00 3.71
302 303 2.234661 TCAAGTGCAATCGTCTGGAGAT 59.765 45.455 0.00 0.00 0.00 2.75
303 304 2.306341 AGTGCAATCGTCTGGAGATG 57.694 50.000 0.00 0.00 0.00 2.90
304 305 1.134580 AGTGCAATCGTCTGGAGATGG 60.135 52.381 0.00 0.00 0.00 3.51
305 306 1.134699 GTGCAATCGTCTGGAGATGGA 60.135 52.381 0.00 0.00 0.00 3.41
306 307 1.137675 TGCAATCGTCTGGAGATGGAG 59.862 52.381 0.00 0.00 0.00 3.86
307 308 1.410517 GCAATCGTCTGGAGATGGAGA 59.589 52.381 0.00 0.00 0.00 3.71
308 309 2.036992 GCAATCGTCTGGAGATGGAGAT 59.963 50.000 0.00 0.00 0.00 2.75
309 310 3.256879 GCAATCGTCTGGAGATGGAGATA 59.743 47.826 0.00 0.00 0.00 1.98
310 311 4.081752 GCAATCGTCTGGAGATGGAGATAT 60.082 45.833 0.00 0.00 0.00 1.63
311 312 5.649557 CAATCGTCTGGAGATGGAGATATC 58.350 45.833 0.00 0.00 0.00 1.63
312 313 4.649267 TCGTCTGGAGATGGAGATATCT 57.351 45.455 4.47 4.47 40.02 1.98
320 321 5.801350 GAGATGGAGATATCTCTGACTCG 57.199 47.826 27.65 0.00 46.12 4.18
321 322 5.487433 GAGATGGAGATATCTCTGACTCGA 58.513 45.833 27.65 3.93 46.12 4.04
322 323 6.065976 AGATGGAGATATCTCTGACTCGAT 57.934 41.667 27.65 8.34 42.48 3.59
323 324 6.115446 AGATGGAGATATCTCTGACTCGATC 58.885 44.000 27.65 15.47 41.44 3.69
324 325 4.249661 TGGAGATATCTCTGACTCGATCG 58.750 47.826 27.65 9.36 42.48 3.69
325 326 4.021016 TGGAGATATCTCTGACTCGATCGA 60.021 45.833 27.65 18.32 42.48 3.59
326 327 5.116180 GGAGATATCTCTGACTCGATCGAT 58.884 45.833 27.65 8.99 42.48 3.59
327 328 5.006649 GGAGATATCTCTGACTCGATCGATG 59.993 48.000 27.65 14.78 42.48 3.84
328 329 5.729510 AGATATCTCTGACTCGATCGATGA 58.270 41.667 19.78 13.03 0.00 2.92
329 330 6.169800 AGATATCTCTGACTCGATCGATGAA 58.830 40.000 19.78 5.95 0.00 2.57
330 331 6.823182 AGATATCTCTGACTCGATCGATGAAT 59.177 38.462 19.78 4.60 0.00 2.57
331 332 4.740741 TCTCTGACTCGATCGATGAATC 57.259 45.455 19.78 13.93 0.00 2.52
332 333 4.130118 TCTCTGACTCGATCGATGAATCA 58.870 43.478 19.78 17.41 0.00 2.57
333 334 4.576463 TCTCTGACTCGATCGATGAATCAA 59.424 41.667 19.78 9.73 0.00 2.57
334 335 5.066505 TCTCTGACTCGATCGATGAATCAAA 59.933 40.000 19.78 6.48 0.00 2.69
335 336 5.037385 TCTGACTCGATCGATGAATCAAAC 58.963 41.667 19.78 3.48 0.00 2.93
336 337 4.998788 TGACTCGATCGATGAATCAAACT 58.001 39.130 19.78 0.00 0.00 2.66
337 338 4.800471 TGACTCGATCGATGAATCAAACTG 59.200 41.667 19.78 4.64 0.00 3.16
338 339 3.553511 ACTCGATCGATGAATCAAACTGC 59.446 43.478 19.78 0.00 0.00 4.40
339 340 2.866156 TCGATCGATGAATCAAACTGCC 59.134 45.455 15.15 0.00 0.00 4.85
340 341 2.347939 CGATCGATGAATCAAACTGCCG 60.348 50.000 10.26 0.00 0.00 5.69
341 342 1.368641 TCGATGAATCAAACTGCCGG 58.631 50.000 0.00 0.00 0.00 6.13
342 343 1.086696 CGATGAATCAAACTGCCGGT 58.913 50.000 1.90 0.00 0.00 5.28
343 344 1.062587 CGATGAATCAAACTGCCGGTC 59.937 52.381 1.90 0.00 0.00 4.79
344 345 2.083774 GATGAATCAAACTGCCGGTCA 58.916 47.619 1.90 0.00 0.00 4.02
345 346 1.234821 TGAATCAAACTGCCGGTCAC 58.765 50.000 1.90 0.00 0.00 3.67
346 347 1.234821 GAATCAAACTGCCGGTCACA 58.765 50.000 1.90 0.00 0.00 3.58
347 348 1.812571 GAATCAAACTGCCGGTCACAT 59.187 47.619 1.90 0.00 0.00 3.21
348 349 2.779755 ATCAAACTGCCGGTCACATA 57.220 45.000 1.90 0.00 0.00 2.29
349 350 1.803334 TCAAACTGCCGGTCACATAC 58.197 50.000 1.90 0.00 0.00 2.39
350 351 1.070914 TCAAACTGCCGGTCACATACA 59.929 47.619 1.90 0.00 0.00 2.29
351 352 1.464608 CAAACTGCCGGTCACATACAG 59.535 52.381 1.90 1.92 0.00 2.74
352 353 0.973632 AACTGCCGGTCACATACAGA 59.026 50.000 1.90 0.00 32.67 3.41
353 354 0.246635 ACTGCCGGTCACATACAGAC 59.753 55.000 1.90 0.00 35.29 3.51
354 355 0.246360 CTGCCGGTCACATACAGACA 59.754 55.000 1.90 0.00 37.74 3.41
355 356 0.682292 TGCCGGTCACATACAGACAA 59.318 50.000 1.90 0.00 37.74 3.18
356 357 1.076332 GCCGGTCACATACAGACAAC 58.924 55.000 1.90 0.00 37.74 3.32
357 358 1.337823 GCCGGTCACATACAGACAACT 60.338 52.381 1.90 0.00 37.74 3.16
370 371 1.337821 GACAACTGTCTACTTCGCCG 58.662 55.000 2.51 0.00 41.65 6.46
371 372 0.038526 ACAACTGTCTACTTCGCCGG 60.039 55.000 0.00 0.00 0.00 6.13
372 373 0.242825 CAACTGTCTACTTCGCCGGA 59.757 55.000 5.05 0.00 0.00 5.14
373 374 1.135083 CAACTGTCTACTTCGCCGGAT 60.135 52.381 5.05 0.00 0.00 4.18
374 375 0.739561 ACTGTCTACTTCGCCGGATC 59.260 55.000 5.05 0.00 0.00 3.36
375 376 0.738975 CTGTCTACTTCGCCGGATCA 59.261 55.000 5.05 0.00 0.00 2.92
376 377 1.134367 CTGTCTACTTCGCCGGATCAA 59.866 52.381 5.05 0.00 0.00 2.57
377 378 1.135199 TGTCTACTTCGCCGGATCAAC 60.135 52.381 5.05 0.00 0.00 3.18
378 379 0.458669 TCTACTTCGCCGGATCAACC 59.541 55.000 5.05 0.00 0.00 3.77
379 380 0.460311 CTACTTCGCCGGATCAACCT 59.540 55.000 5.05 0.00 36.31 3.50
380 381 1.679680 CTACTTCGCCGGATCAACCTA 59.320 52.381 5.05 0.00 36.31 3.08
381 382 0.175073 ACTTCGCCGGATCAACCTAC 59.825 55.000 5.05 0.00 36.31 3.18
382 383 0.870307 CTTCGCCGGATCAACCTACG 60.870 60.000 5.05 0.00 36.45 3.51
387 388 3.357504 CGGATCAACCTACGGAACC 57.642 57.895 0.00 0.00 36.31 3.62
388 389 0.822164 CGGATCAACCTACGGAACCT 59.178 55.000 0.00 0.00 36.31 3.50
389 390 1.206371 CGGATCAACCTACGGAACCTT 59.794 52.381 0.00 0.00 36.31 3.50
390 391 2.737679 CGGATCAACCTACGGAACCTTC 60.738 54.545 0.00 0.00 36.31 3.46
391 392 2.500504 GGATCAACCTACGGAACCTTCT 59.499 50.000 0.00 0.00 35.41 2.85
392 393 3.703052 GGATCAACCTACGGAACCTTCTA 59.297 47.826 0.00 0.00 35.41 2.10
393 394 4.344390 GGATCAACCTACGGAACCTTCTAT 59.656 45.833 0.00 0.00 35.41 1.98
394 395 4.996788 TCAACCTACGGAACCTTCTATC 57.003 45.455 0.00 0.00 0.00 2.08
395 396 4.607239 TCAACCTACGGAACCTTCTATCT 58.393 43.478 0.00 0.00 0.00 1.98
396 397 5.759059 TCAACCTACGGAACCTTCTATCTA 58.241 41.667 0.00 0.00 0.00 1.98
397 398 5.826737 TCAACCTACGGAACCTTCTATCTAG 59.173 44.000 0.00 0.00 0.00 2.43
398 399 4.143543 ACCTACGGAACCTTCTATCTAGC 58.856 47.826 0.00 0.00 0.00 3.42
399 400 4.141205 ACCTACGGAACCTTCTATCTAGCT 60.141 45.833 0.00 0.00 0.00 3.32
400 401 4.828387 CCTACGGAACCTTCTATCTAGCTT 59.172 45.833 0.00 0.00 0.00 3.74
401 402 4.657436 ACGGAACCTTCTATCTAGCTTG 57.343 45.455 0.00 0.00 0.00 4.01
402 403 4.279145 ACGGAACCTTCTATCTAGCTTGA 58.721 43.478 0.00 0.00 0.00 3.02
403 404 4.098196 ACGGAACCTTCTATCTAGCTTGAC 59.902 45.833 0.00 0.00 0.00 3.18
404 405 4.339814 CGGAACCTTCTATCTAGCTTGACT 59.660 45.833 0.00 0.00 0.00 3.41
405 406 5.596845 GGAACCTTCTATCTAGCTTGACTG 58.403 45.833 0.00 0.00 0.00 3.51
406 407 5.361285 GGAACCTTCTATCTAGCTTGACTGA 59.639 44.000 0.00 0.00 0.00 3.41
407 408 6.460953 GGAACCTTCTATCTAGCTTGACTGAG 60.461 46.154 0.00 0.00 0.00 3.35
408 409 4.340950 ACCTTCTATCTAGCTTGACTGAGC 59.659 45.833 0.00 0.00 43.02 4.26
431 432 1.981256 TTTGTCCTGAGGAAACAGCC 58.019 50.000 0.96 0.00 36.67 4.85
432 433 0.250295 TTGTCCTGAGGAAACAGCCG 60.250 55.000 0.96 0.00 36.67 5.52
433 434 1.118965 TGTCCTGAGGAAACAGCCGA 61.119 55.000 0.96 0.00 36.67 5.54
434 435 0.250513 GTCCTGAGGAAACAGCCGAT 59.749 55.000 0.96 0.00 36.67 4.18
435 436 0.537188 TCCTGAGGAAACAGCCGATC 59.463 55.000 0.00 0.00 36.67 3.69
436 437 0.539051 CCTGAGGAAACAGCCGATCT 59.461 55.000 0.00 0.00 36.67 2.75
437 438 1.757118 CCTGAGGAAACAGCCGATCTA 59.243 52.381 0.00 0.00 36.67 1.98
438 439 2.223923 CCTGAGGAAACAGCCGATCTAG 60.224 54.545 0.00 0.00 36.67 2.43
439 440 2.428890 CTGAGGAAACAGCCGATCTAGT 59.571 50.000 0.00 0.00 0.00 2.57
440 441 3.628008 TGAGGAAACAGCCGATCTAGTA 58.372 45.455 0.00 0.00 0.00 1.82
441 442 4.215908 TGAGGAAACAGCCGATCTAGTAT 58.784 43.478 0.00 0.00 0.00 2.12
442 443 4.649674 TGAGGAAACAGCCGATCTAGTATT 59.350 41.667 0.00 0.00 0.00 1.89
443 444 5.203060 AGGAAACAGCCGATCTAGTATTC 57.797 43.478 0.00 0.00 0.00 1.75
444 445 4.649674 AGGAAACAGCCGATCTAGTATTCA 59.350 41.667 0.00 0.00 0.00 2.57
445 446 5.305644 AGGAAACAGCCGATCTAGTATTCAT 59.694 40.000 0.00 0.00 0.00 2.57
446 447 5.635700 GGAAACAGCCGATCTAGTATTCATC 59.364 44.000 0.00 0.00 0.00 2.92
447 448 5.791336 AACAGCCGATCTAGTATTCATCA 57.209 39.130 0.00 0.00 0.00 3.07
448 449 5.991933 ACAGCCGATCTAGTATTCATCAT 57.008 39.130 0.00 0.00 0.00 2.45
449 450 5.718146 ACAGCCGATCTAGTATTCATCATG 58.282 41.667 0.00 0.00 0.00 3.07
450 451 5.107824 CAGCCGATCTAGTATTCATCATGG 58.892 45.833 0.00 0.00 0.00 3.66
451 452 3.868077 GCCGATCTAGTATTCATCATGGC 59.132 47.826 0.00 0.00 0.00 4.40
452 453 4.621510 GCCGATCTAGTATTCATCATGGCA 60.622 45.833 0.00 0.00 37.54 4.92
453 454 5.668471 CCGATCTAGTATTCATCATGGCAT 58.332 41.667 0.00 0.00 0.00 4.40
454 455 5.522824 CCGATCTAGTATTCATCATGGCATG 59.477 44.000 21.42 21.42 0.00 4.06
455 456 5.522824 CGATCTAGTATTCATCATGGCATGG 59.477 44.000 26.15 12.13 0.00 3.66
456 457 4.582869 TCTAGTATTCATCATGGCATGGC 58.417 43.478 26.15 13.29 0.00 4.40
457 458 3.520691 AGTATTCATCATGGCATGGCT 57.479 42.857 26.15 12.11 0.00 4.75
458 459 3.154710 AGTATTCATCATGGCATGGCTG 58.845 45.455 26.15 21.96 0.00 4.85
459 460 2.082140 ATTCATCATGGCATGGCTGT 57.918 45.000 26.15 6.37 0.00 4.40
460 461 2.732844 TTCATCATGGCATGGCTGTA 57.267 45.000 26.15 14.91 0.00 2.74
461 462 1.971481 TCATCATGGCATGGCTGTAC 58.029 50.000 26.15 0.00 0.00 2.90
462 463 1.212441 TCATCATGGCATGGCTGTACA 59.788 47.619 26.15 6.44 0.00 2.90
463 464 2.025898 CATCATGGCATGGCTGTACAA 58.974 47.619 26.15 5.68 0.00 2.41
464 465 2.212812 TCATGGCATGGCTGTACAAA 57.787 45.000 26.15 1.54 0.00 2.83
465 466 2.523245 TCATGGCATGGCTGTACAAAA 58.477 42.857 26.15 0.77 0.00 2.44
466 467 2.896044 TCATGGCATGGCTGTACAAAAA 59.104 40.909 26.15 0.23 0.00 1.94
467 468 2.810439 TGGCATGGCTGTACAAAAAC 57.190 45.000 21.08 0.00 0.00 2.43
468 469 2.034878 TGGCATGGCTGTACAAAAACA 58.965 42.857 21.08 0.00 0.00 2.83
469 470 2.223923 TGGCATGGCTGTACAAAAACAC 60.224 45.455 21.08 0.00 0.00 3.32
470 471 2.223923 GGCATGGCTGTACAAAAACACA 60.224 45.455 12.86 0.00 0.00 3.72
471 472 3.452474 GCATGGCTGTACAAAAACACAA 58.548 40.909 0.00 0.00 0.00 3.33
472 473 3.868077 GCATGGCTGTACAAAAACACAAA 59.132 39.130 0.00 0.00 0.00 2.83
473 474 4.331168 GCATGGCTGTACAAAAACACAAAA 59.669 37.500 0.00 0.00 0.00 2.44
474 475 5.163814 GCATGGCTGTACAAAAACACAAAAA 60.164 36.000 0.00 0.00 0.00 1.94
475 476 6.458070 GCATGGCTGTACAAAAACACAAAAAT 60.458 34.615 0.00 0.00 0.00 1.82
476 477 7.254590 GCATGGCTGTACAAAAACACAAAAATA 60.255 33.333 0.00 0.00 0.00 1.40
477 478 8.607459 CATGGCTGTACAAAAACACAAAAATAA 58.393 29.630 0.00 0.00 0.00 1.40
478 479 7.965045 TGGCTGTACAAAAACACAAAAATAAC 58.035 30.769 0.00 0.00 0.00 1.89
479 480 7.602644 TGGCTGTACAAAAACACAAAAATAACA 59.397 29.630 0.00 0.00 0.00 2.41
480 481 8.443937 GGCTGTACAAAAACACAAAAATAACAA 58.556 29.630 0.00 0.00 0.00 2.83
481 482 9.813080 GCTGTACAAAAACACAAAAATAACAAA 57.187 25.926 0.00 0.00 0.00 2.83
556 557 3.817084 CAGTGTACCATGCAGGAATATGG 59.183 47.826 0.00 0.00 41.22 2.74
559 560 2.369983 ACCATGCAGGAATATGGTGG 57.630 50.000 6.61 1.14 44.89 4.61
560 561 1.570501 ACCATGCAGGAATATGGTGGT 59.429 47.619 6.61 1.81 44.89 4.16
639 640 5.592054 TCTCTCGAACACCATCAATATGAC 58.408 41.667 0.00 0.00 34.84 3.06
703 704 2.354821 GTCGTTCCATCAGTAATTGCCC 59.645 50.000 0.00 0.00 0.00 5.36
880 881 0.886490 CGCTAGTTGGCCATGGATCC 60.886 60.000 18.40 8.91 0.00 3.36
881 882 0.183492 GCTAGTTGGCCATGGATCCA 59.817 55.000 18.88 18.88 0.00 3.41
885 886 2.095270 TTGGCCATGGATCCAACCT 58.905 52.632 20.67 0.00 37.43 3.50
928 941 3.726517 CTGCCCGCCGTTTCAGTG 61.727 66.667 0.00 0.00 0.00 3.66
982 995 1.416813 CCGAGCAACGAGATCAGCAC 61.417 60.000 4.96 0.00 45.77 4.40
1015 1028 2.075355 AACCATGAAGGCGGGGACAA 62.075 55.000 0.00 0.00 43.14 3.18
1110 1123 1.375908 GCTGTTCTGGTGCATCGGA 60.376 57.895 3.76 3.76 0.00 4.55
1638 1651 2.654912 CGTCAACTTCACCGCCGTC 61.655 63.158 0.00 0.00 0.00 4.79
1719 1733 0.464373 ACACCGCCATGTGATCATCC 60.464 55.000 0.00 0.00 39.57 3.51
1821 1835 6.999272 TGGTGCTCCTGTACAAACTTTAAATA 59.001 34.615 6.34 0.00 34.23 1.40
1880 3867 6.964807 TGCATATTTGGAGCATACAGATTT 57.035 33.333 0.00 0.00 32.55 2.17
1881 3868 7.350744 TGCATATTTGGAGCATACAGATTTT 57.649 32.000 0.00 0.00 32.55 1.82
1882 3869 7.784037 TGCATATTTGGAGCATACAGATTTTT 58.216 30.769 0.00 0.00 32.55 1.94
1935 3981 1.134491 GTGCCCTTACGCCTCACTATT 60.134 52.381 0.00 0.00 0.00 1.73
1981 4029 0.108804 CCGCACGGTGTATCAAGAGT 60.109 55.000 10.24 0.00 0.00 3.24
2043 4105 0.467290 ACGCTTCCAACACCACCATT 60.467 50.000 0.00 0.00 0.00 3.16
2085 4148 3.737850 AGAAAAGATCCGCATCATCCTC 58.262 45.455 0.00 0.00 0.00 3.71
2181 4246 2.990479 GCCCCGAGACTCCATTGT 59.010 61.111 0.00 0.00 0.00 2.71
2189 4254 3.133003 CCGAGACTCCATTGTACCATTCT 59.867 47.826 0.00 0.00 0.00 2.40
2191 4256 4.142160 CGAGACTCCATTGTACCATTCTGA 60.142 45.833 0.00 0.00 0.00 3.27
2319 4386 0.669077 AGACGCTACCATCATCCGAC 59.331 55.000 0.00 0.00 0.00 4.79
2338 4406 1.131638 CCCGGGAGAATCAGATCCAA 58.868 55.000 18.48 0.00 37.33 3.53
2346 4414 4.080072 GGAGAATCAGATCCAAGTTTCCCT 60.080 45.833 0.00 0.00 36.25 4.20
2399 4467 0.392461 GGTGATCCAAAGCCGCTACA 60.392 55.000 0.00 0.00 0.00 2.74
2441 4509 5.762218 GCAGATATGAGCTCCAAAATAGTGT 59.238 40.000 12.15 0.00 0.00 3.55
2528 4596 1.000359 TCAGAGCTCGATGGGACCA 60.000 57.895 8.37 0.00 0.00 4.02
2529 4597 0.397675 TCAGAGCTCGATGGGACCAT 60.398 55.000 8.37 2.93 39.69 3.55
2547 4615 1.070601 CATCACCATGACGATGCCCTA 59.929 52.381 10.26 0.00 33.19 3.53
2561 4629 0.179081 GCCCTACAAGGAGGTTAGCG 60.179 60.000 0.00 0.00 37.67 4.26
2621 4689 3.551846 TCCGGGCAAATAATTTCTCCTC 58.448 45.455 0.00 0.00 0.00 3.71
2622 4690 2.623416 CCGGGCAAATAATTTCTCCTCC 59.377 50.000 0.00 0.00 0.00 4.30
2623 4691 2.290641 CGGGCAAATAATTTCTCCTCCG 59.709 50.000 0.00 0.00 0.00 4.63
2631 4699 7.012421 GCAAATAATTTCTCCTCCGTGATAGTT 59.988 37.037 0.00 0.00 0.00 2.24
2665 4733 2.511145 CAGGAGGCAGAAGCGCTC 60.511 66.667 12.06 4.30 43.41 5.03
2674 4742 1.538634 GCAGAAGCGCTCATCAGAGAT 60.539 52.381 12.06 0.00 44.98 2.75
2686 4754 3.055602 TCATCAGAGATGTCCACCAACAG 60.056 47.826 6.86 0.00 31.50 3.16
2688 4756 2.972021 TCAGAGATGTCCACCAACAGAA 59.028 45.455 0.00 0.00 31.50 3.02
2689 4757 3.390967 TCAGAGATGTCCACCAACAGAAA 59.609 43.478 0.00 0.00 31.50 2.52
2692 4760 3.490348 AGATGTCCACCAACAGAAAAGG 58.510 45.455 0.00 0.00 31.50 3.11
2697 4765 3.066760 GTCCACCAACAGAAAAGGAACAG 59.933 47.826 0.00 0.00 0.00 3.16
2701 4769 2.943033 CCAACAGAAAAGGAACAGACGT 59.057 45.455 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.671279 CAGGCACATTATATAATTCCTACATGA 57.329 33.333 15.20 0.00 0.00 3.07
11 12 9.453572 ACAGGCACATTATATAATTCCTACATG 57.546 33.333 15.20 10.02 0.00 3.21
26 27 9.936759 TTTCGATCAATATATACAGGCACATTA 57.063 29.630 0.00 0.00 0.00 1.90
27 28 8.846943 TTTCGATCAATATATACAGGCACATT 57.153 30.769 0.00 0.00 0.00 2.71
28 29 7.065085 GCTTTCGATCAATATATACAGGCACAT 59.935 37.037 0.00 0.00 0.00 3.21
29 30 6.368791 GCTTTCGATCAATATATACAGGCACA 59.631 38.462 0.00 0.00 0.00 4.57
30 31 6.183360 GGCTTTCGATCAATATATACAGGCAC 60.183 42.308 0.00 0.00 0.00 5.01
31 32 5.874810 GGCTTTCGATCAATATATACAGGCA 59.125 40.000 0.00 0.00 0.00 4.75
32 33 5.294552 GGGCTTTCGATCAATATATACAGGC 59.705 44.000 0.00 0.00 0.00 4.85
33 34 6.406370 TGGGCTTTCGATCAATATATACAGG 58.594 40.000 0.00 0.00 0.00 4.00
34 35 8.498054 AATGGGCTTTCGATCAATATATACAG 57.502 34.615 0.00 0.00 0.00 2.74
38 39 9.685276 TCAATAATGGGCTTTCGATCAATATAT 57.315 29.630 0.00 0.00 0.00 0.86
39 40 8.946085 GTCAATAATGGGCTTTCGATCAATATA 58.054 33.333 0.00 0.00 0.00 0.86
40 41 7.667219 AGTCAATAATGGGCTTTCGATCAATAT 59.333 33.333 0.00 0.00 0.00 1.28
41 42 6.998074 AGTCAATAATGGGCTTTCGATCAATA 59.002 34.615 0.00 0.00 0.00 1.90
42 43 5.829924 AGTCAATAATGGGCTTTCGATCAAT 59.170 36.000 0.00 0.00 0.00 2.57
43 44 5.192927 AGTCAATAATGGGCTTTCGATCAA 58.807 37.500 0.00 0.00 0.00 2.57
44 45 4.780815 AGTCAATAATGGGCTTTCGATCA 58.219 39.130 0.00 0.00 0.00 2.92
45 46 5.992217 ACTAGTCAATAATGGGCTTTCGATC 59.008 40.000 0.00 0.00 0.00 3.69
46 47 5.760253 CACTAGTCAATAATGGGCTTTCGAT 59.240 40.000 0.00 0.00 0.00 3.59
47 48 5.116180 CACTAGTCAATAATGGGCTTTCGA 58.884 41.667 0.00 0.00 0.00 3.71
48 49 4.273480 CCACTAGTCAATAATGGGCTTTCG 59.727 45.833 0.00 0.00 0.00 3.46
49 50 4.036852 GCCACTAGTCAATAATGGGCTTTC 59.963 45.833 8.86 0.00 37.22 2.62
50 51 3.954258 GCCACTAGTCAATAATGGGCTTT 59.046 43.478 8.86 0.00 37.22 3.51
51 52 3.053693 TGCCACTAGTCAATAATGGGCTT 60.054 43.478 15.26 0.00 40.72 4.35
52 53 2.509548 TGCCACTAGTCAATAATGGGCT 59.490 45.455 15.26 0.00 40.72 5.19
53 54 2.930950 TGCCACTAGTCAATAATGGGC 58.069 47.619 9.13 9.13 40.51 5.36
54 55 5.652014 TCTTTTGCCACTAGTCAATAATGGG 59.348 40.000 0.00 0.00 0.00 4.00
55 56 6.757897 TCTTTTGCCACTAGTCAATAATGG 57.242 37.500 0.00 0.00 0.00 3.16
56 57 8.044060 TCTTCTTTTGCCACTAGTCAATAATG 57.956 34.615 0.00 0.00 0.00 1.90
57 58 8.635765 TTCTTCTTTTGCCACTAGTCAATAAT 57.364 30.769 0.00 0.00 0.00 1.28
58 59 7.936847 TCTTCTTCTTTTGCCACTAGTCAATAA 59.063 33.333 0.00 0.00 0.00 1.40
59 60 7.450074 TCTTCTTCTTTTGCCACTAGTCAATA 58.550 34.615 0.00 0.00 0.00 1.90
60 61 6.299141 TCTTCTTCTTTTGCCACTAGTCAAT 58.701 36.000 0.00 0.00 0.00 2.57
61 62 5.680619 TCTTCTTCTTTTGCCACTAGTCAA 58.319 37.500 0.00 0.00 0.00 3.18
62 63 5.290493 TCTTCTTCTTTTGCCACTAGTCA 57.710 39.130 0.00 0.00 0.00 3.41
63 64 6.619801 TTTCTTCTTCTTTTGCCACTAGTC 57.380 37.500 0.00 0.00 0.00 2.59
64 65 7.285401 TGATTTTCTTCTTCTTTTGCCACTAGT 59.715 33.333 0.00 0.00 0.00 2.57
65 66 7.651808 TGATTTTCTTCTTCTTTTGCCACTAG 58.348 34.615 0.00 0.00 0.00 2.57
66 67 7.581213 TGATTTTCTTCTTCTTTTGCCACTA 57.419 32.000 0.00 0.00 0.00 2.74
67 68 6.469782 TGATTTTCTTCTTCTTTTGCCACT 57.530 33.333 0.00 0.00 0.00 4.00
68 69 6.758416 AGTTGATTTTCTTCTTCTTTTGCCAC 59.242 34.615 0.00 0.00 0.00 5.01
69 70 6.877236 AGTTGATTTTCTTCTTCTTTTGCCA 58.123 32.000 0.00 0.00 0.00 4.92
70 71 7.254556 CCAAGTTGATTTTCTTCTTCTTTTGCC 60.255 37.037 3.87 0.00 0.00 4.52
71 72 7.624661 CCAAGTTGATTTTCTTCTTCTTTTGC 58.375 34.615 3.87 0.00 0.00 3.68
72 73 7.515684 CGCCAAGTTGATTTTCTTCTTCTTTTG 60.516 37.037 3.87 0.00 0.00 2.44
73 74 6.476706 CGCCAAGTTGATTTTCTTCTTCTTTT 59.523 34.615 3.87 0.00 0.00 2.27
74 75 5.979517 CGCCAAGTTGATTTTCTTCTTCTTT 59.020 36.000 3.87 0.00 0.00 2.52
75 76 5.523369 CGCCAAGTTGATTTTCTTCTTCTT 58.477 37.500 3.87 0.00 0.00 2.52
76 77 4.557496 GCGCCAAGTTGATTTTCTTCTTCT 60.557 41.667 3.87 0.00 0.00 2.85
77 78 3.670523 GCGCCAAGTTGATTTTCTTCTTC 59.329 43.478 3.87 0.00 0.00 2.87
78 79 3.068024 TGCGCCAAGTTGATTTTCTTCTT 59.932 39.130 4.18 0.00 0.00 2.52
79 80 2.622942 TGCGCCAAGTTGATTTTCTTCT 59.377 40.909 4.18 0.00 0.00 2.85
80 81 3.011949 TGCGCCAAGTTGATTTTCTTC 57.988 42.857 4.18 0.00 0.00 2.87
81 82 3.319755 CATGCGCCAAGTTGATTTTCTT 58.680 40.909 4.18 0.00 0.00 2.52
82 83 2.353011 CCATGCGCCAAGTTGATTTTCT 60.353 45.455 4.18 0.00 0.00 2.52
83 84 1.994779 CCATGCGCCAAGTTGATTTTC 59.005 47.619 4.18 0.00 0.00 2.29
84 85 1.617850 TCCATGCGCCAAGTTGATTTT 59.382 42.857 4.18 0.00 0.00 1.82
85 86 1.067635 GTCCATGCGCCAAGTTGATTT 60.068 47.619 4.18 0.00 0.00 2.17
86 87 0.527565 GTCCATGCGCCAAGTTGATT 59.472 50.000 4.18 0.00 0.00 2.57
87 88 1.647545 CGTCCATGCGCCAAGTTGAT 61.648 55.000 4.18 0.00 0.00 2.57
88 89 2.324330 CGTCCATGCGCCAAGTTGA 61.324 57.895 4.18 0.00 0.00 3.18
89 90 2.176546 CGTCCATGCGCCAAGTTG 59.823 61.111 4.18 0.00 0.00 3.16
90 91 2.031919 TCGTCCATGCGCCAAGTT 59.968 55.556 4.18 0.00 0.00 2.66
91 92 2.742372 GTCGTCCATGCGCCAAGT 60.742 61.111 4.18 0.00 0.00 3.16
92 93 3.853330 CGTCGTCCATGCGCCAAG 61.853 66.667 4.18 0.00 0.00 3.61
93 94 3.284133 TACGTCGTCCATGCGCCAA 62.284 57.895 4.18 0.00 0.00 4.52
94 95 3.750155 TACGTCGTCCATGCGCCA 61.750 61.111 4.18 0.00 0.00 5.69
95 96 3.252484 GTACGTCGTCCATGCGCC 61.252 66.667 4.18 0.00 0.00 6.53
96 97 1.418342 ATTGTACGTCGTCCATGCGC 61.418 55.000 0.00 0.00 0.00 6.09
97 98 0.297525 CATTGTACGTCGTCCATGCG 59.702 55.000 0.00 0.00 0.00 4.73
98 99 0.650512 CCATTGTACGTCGTCCATGC 59.349 55.000 0.00 0.00 0.00 4.06
99 100 0.650512 GCCATTGTACGTCGTCCATG 59.349 55.000 0.00 2.80 0.00 3.66
100 101 0.461339 GGCCATTGTACGTCGTCCAT 60.461 55.000 0.00 0.00 0.00 3.41
101 102 1.079681 GGCCATTGTACGTCGTCCA 60.080 57.895 0.00 0.00 0.00 4.02
102 103 1.079681 TGGCCATTGTACGTCGTCC 60.080 57.895 0.00 0.00 0.00 4.79
103 104 1.082117 CCTGGCCATTGTACGTCGTC 61.082 60.000 5.51 0.00 0.00 4.20
104 105 1.079405 CCTGGCCATTGTACGTCGT 60.079 57.895 5.51 2.21 0.00 4.34
105 106 1.813753 CCCTGGCCATTGTACGTCG 60.814 63.158 5.51 0.00 0.00 5.12
106 107 2.112815 GCCCTGGCCATTGTACGTC 61.113 63.158 5.51 0.00 34.56 4.34
107 108 2.045340 GCCCTGGCCATTGTACGT 60.045 61.111 5.51 0.00 34.56 3.57
108 109 1.247419 TTTGCCCTGGCCATTGTACG 61.247 55.000 5.51 0.00 41.09 3.67
109 110 0.246360 GTTTGCCCTGGCCATTGTAC 59.754 55.000 5.51 0.00 41.09 2.90
110 111 0.178950 TGTTTGCCCTGGCCATTGTA 60.179 50.000 5.51 0.00 41.09 2.41
111 112 1.459158 TGTTTGCCCTGGCCATTGT 60.459 52.632 5.51 0.00 41.09 2.71
112 113 1.294138 CTGTTTGCCCTGGCCATTG 59.706 57.895 5.51 0.53 41.09 2.82
113 114 2.586293 GCTGTTTGCCCTGGCCATT 61.586 57.895 5.51 0.00 41.09 3.16
114 115 2.999063 GCTGTTTGCCCTGGCCAT 60.999 61.111 5.51 0.00 41.09 4.40
123 124 2.658268 GGTGCGTTGGCTGTTTGC 60.658 61.111 0.00 0.00 40.82 3.68
124 125 2.027460 GGGTGCGTTGGCTGTTTG 59.973 61.111 0.00 0.00 40.82 2.93
125 126 1.832167 ATGGGTGCGTTGGCTGTTT 60.832 52.632 0.00 0.00 40.82 2.83
126 127 2.203480 ATGGGTGCGTTGGCTGTT 60.203 55.556 0.00 0.00 40.82 3.16
127 128 2.985282 CATGGGTGCGTTGGCTGT 60.985 61.111 0.00 0.00 40.82 4.40
128 129 3.751246 CCATGGGTGCGTTGGCTG 61.751 66.667 2.85 0.00 40.82 4.85
146 147 3.142838 CAATGGGAAGCAGGCCGG 61.143 66.667 0.00 0.00 0.00 6.13
147 148 2.891941 TAGCAATGGGAAGCAGGCCG 62.892 60.000 0.00 0.00 0.00 6.13
148 149 0.468771 ATAGCAATGGGAAGCAGGCC 60.469 55.000 0.00 0.00 0.00 5.19
149 150 0.957362 GATAGCAATGGGAAGCAGGC 59.043 55.000 0.00 0.00 0.00 4.85
150 151 1.233019 CGATAGCAATGGGAAGCAGG 58.767 55.000 0.00 0.00 0.00 4.85
151 152 1.600957 CACGATAGCAATGGGAAGCAG 59.399 52.381 0.00 0.00 42.67 4.24
152 153 1.667236 CACGATAGCAATGGGAAGCA 58.333 50.000 0.00 0.00 42.67 3.91
153 154 0.947244 CCACGATAGCAATGGGAAGC 59.053 55.000 0.00 0.00 42.67 3.86
154 155 2.620251 TCCACGATAGCAATGGGAAG 57.380 50.000 0.00 0.00 42.67 3.46
155 156 3.213506 CAATCCACGATAGCAATGGGAA 58.786 45.455 0.00 0.00 42.67 3.97
156 157 2.849942 CAATCCACGATAGCAATGGGA 58.150 47.619 0.00 0.00 42.67 4.37
157 158 1.267806 GCAATCCACGATAGCAATGGG 59.732 52.381 0.00 0.00 42.67 4.00
158 159 1.267806 GGCAATCCACGATAGCAATGG 59.732 52.381 0.00 0.00 42.67 3.16
159 160 2.031420 CAGGCAATCCACGATAGCAATG 60.031 50.000 0.00 0.00 42.67 2.82
160 161 2.224606 CAGGCAATCCACGATAGCAAT 58.775 47.619 0.00 0.00 42.67 3.56
161 162 1.667236 CAGGCAATCCACGATAGCAA 58.333 50.000 0.00 0.00 42.67 3.91
162 163 0.815213 GCAGGCAATCCACGATAGCA 60.815 55.000 0.00 0.00 42.67 3.49
163 164 1.510480 GGCAGGCAATCCACGATAGC 61.510 60.000 0.00 0.00 42.67 2.97
164 165 0.886490 GGGCAGGCAATCCACGATAG 60.886 60.000 0.00 0.00 46.19 2.08
165 166 1.148273 GGGCAGGCAATCCACGATA 59.852 57.895 0.00 0.00 33.74 2.92
166 167 2.124151 GGGCAGGCAATCCACGAT 60.124 61.111 0.00 0.00 33.74 3.73
167 168 4.776322 CGGGCAGGCAATCCACGA 62.776 66.667 0.00 0.00 33.74 4.35
185 186 1.961180 ATTTCCTCGACTCGCCCTGG 61.961 60.000 0.00 0.00 0.00 4.45
186 187 0.108138 AATTTCCTCGACTCGCCCTG 60.108 55.000 0.00 0.00 0.00 4.45
187 188 0.175989 GAATTTCCTCGACTCGCCCT 59.824 55.000 0.00 0.00 0.00 5.19
188 189 1.146358 CGAATTTCCTCGACTCGCCC 61.146 60.000 0.00 0.00 41.44 6.13
189 190 1.146358 CCGAATTTCCTCGACTCGCC 61.146 60.000 0.00 0.00 41.44 5.54
190 191 0.179145 TCCGAATTTCCTCGACTCGC 60.179 55.000 0.00 0.00 41.44 5.03
191 192 2.273370 TTCCGAATTTCCTCGACTCG 57.727 50.000 0.00 0.00 41.44 4.18
192 193 3.309954 CCATTTCCGAATTTCCTCGACTC 59.690 47.826 0.00 0.00 41.44 3.36
193 194 3.270877 CCATTTCCGAATTTCCTCGACT 58.729 45.455 0.00 0.00 41.44 4.18
194 195 3.007635 ACCATTTCCGAATTTCCTCGAC 58.992 45.455 0.00 0.00 41.44 4.20
195 196 3.267483 GACCATTTCCGAATTTCCTCGA 58.733 45.455 0.00 0.00 41.44 4.04
196 197 3.006940 TGACCATTTCCGAATTTCCTCG 58.993 45.455 0.00 0.00 38.58 4.63
197 198 3.181510 CGTGACCATTTCCGAATTTCCTC 60.182 47.826 0.00 0.00 0.00 3.71
198 199 2.747446 CGTGACCATTTCCGAATTTCCT 59.253 45.455 0.00 0.00 0.00 3.36
199 200 2.159435 CCGTGACCATTTCCGAATTTCC 60.159 50.000 0.00 0.00 0.00 3.13
200 201 2.486592 ACCGTGACCATTTCCGAATTTC 59.513 45.455 0.00 0.00 0.00 2.17
201 202 2.486592 GACCGTGACCATTTCCGAATTT 59.513 45.455 0.00 0.00 0.00 1.82
202 203 2.081462 GACCGTGACCATTTCCGAATT 58.919 47.619 0.00 0.00 0.00 2.17
203 204 1.677820 GGACCGTGACCATTTCCGAAT 60.678 52.381 0.00 0.00 0.00 3.34
204 205 0.320946 GGACCGTGACCATTTCCGAA 60.321 55.000 0.00 0.00 0.00 4.30
205 206 1.294138 GGACCGTGACCATTTCCGA 59.706 57.895 0.00 0.00 0.00 4.55
206 207 2.098233 CGGACCGTGACCATTTCCG 61.098 63.158 5.48 0.00 42.98 4.30
207 208 2.396157 GCGGACCGTGACCATTTCC 61.396 63.158 16.73 0.00 0.00 3.13
208 209 1.359459 GAGCGGACCGTGACCATTTC 61.359 60.000 16.73 0.00 0.00 2.17
209 210 1.375523 GAGCGGACCGTGACCATTT 60.376 57.895 16.73 0.00 0.00 2.32
210 211 2.264794 GAGCGGACCGTGACCATT 59.735 61.111 16.73 0.00 0.00 3.16
211 212 4.129737 CGAGCGGACCGTGACCAT 62.130 66.667 16.73 0.00 0.00 3.55
213 214 3.966026 CTTCGAGCGGACCGTGACC 62.966 68.421 16.73 0.00 0.00 4.02
214 215 2.504244 CTTCGAGCGGACCGTGAC 60.504 66.667 16.73 6.41 0.00 3.67
215 216 3.744719 CCTTCGAGCGGACCGTGA 61.745 66.667 16.73 8.59 0.00 4.35
216 217 3.064987 ATCCTTCGAGCGGACCGTG 62.065 63.158 16.73 6.17 32.41 4.94
217 218 2.754658 ATCCTTCGAGCGGACCGT 60.755 61.111 16.73 1.83 32.41 4.83
218 219 2.278857 CATCCTTCGAGCGGACCG 60.279 66.667 10.29 10.29 32.41 4.79
219 220 2.107141 CCATCCTTCGAGCGGACC 59.893 66.667 7.58 0.00 32.41 4.46
220 221 1.066587 CTCCATCCTTCGAGCGGAC 59.933 63.158 7.58 0.00 32.41 4.79
221 222 2.127869 CCTCCATCCTTCGAGCGGA 61.128 63.158 7.83 7.83 34.52 5.54
222 223 1.107538 TACCTCCATCCTTCGAGCGG 61.108 60.000 0.00 0.00 0.00 5.52
223 224 0.962489 ATACCTCCATCCTTCGAGCG 59.038 55.000 0.00 0.00 0.00 5.03
224 225 2.891580 TGTATACCTCCATCCTTCGAGC 59.108 50.000 0.00 0.00 0.00 5.03
225 226 3.057174 GCTGTATACCTCCATCCTTCGAG 60.057 52.174 0.00 0.00 0.00 4.04
226 227 2.891580 GCTGTATACCTCCATCCTTCGA 59.108 50.000 0.00 0.00 0.00 3.71
227 228 2.028930 GGCTGTATACCTCCATCCTTCG 60.029 54.545 0.00 0.00 0.00 3.79
228 229 2.028930 CGGCTGTATACCTCCATCCTTC 60.029 54.545 0.00 0.00 0.00 3.46
229 230 1.971357 CGGCTGTATACCTCCATCCTT 59.029 52.381 0.00 0.00 0.00 3.36
230 231 1.133136 ACGGCTGTATACCTCCATCCT 60.133 52.381 0.00 0.00 0.00 3.24
231 232 1.000955 CACGGCTGTATACCTCCATCC 59.999 57.143 0.00 0.00 0.00 3.51
232 233 1.000955 CCACGGCTGTATACCTCCATC 59.999 57.143 0.00 0.00 0.00 3.51
233 234 1.048601 CCACGGCTGTATACCTCCAT 58.951 55.000 0.00 0.00 0.00 3.41
234 235 0.032912 TCCACGGCTGTATACCTCCA 60.033 55.000 0.00 0.00 0.00 3.86
235 236 1.000955 CATCCACGGCTGTATACCTCC 59.999 57.143 0.00 0.54 0.00 4.30
236 237 1.605712 GCATCCACGGCTGTATACCTC 60.606 57.143 0.00 0.00 0.00 3.85
237 238 0.393077 GCATCCACGGCTGTATACCT 59.607 55.000 0.00 0.00 0.00 3.08
238 239 0.105964 TGCATCCACGGCTGTATACC 59.894 55.000 0.00 0.00 0.00 2.73
239 240 2.069273 GATGCATCCACGGCTGTATAC 58.931 52.381 16.23 0.00 0.00 1.47
240 241 1.970640 AGATGCATCCACGGCTGTATA 59.029 47.619 23.06 0.00 0.00 1.47
241 242 0.761187 AGATGCATCCACGGCTGTAT 59.239 50.000 23.06 0.00 0.00 2.29
242 243 1.341209 CTAGATGCATCCACGGCTGTA 59.659 52.381 23.06 5.55 0.00 2.74
243 244 0.105593 CTAGATGCATCCACGGCTGT 59.894 55.000 23.06 4.58 0.00 4.40
244 245 1.226686 GCTAGATGCATCCACGGCTG 61.227 60.000 23.06 6.88 42.31 4.85
245 246 1.070445 GCTAGATGCATCCACGGCT 59.930 57.895 23.06 6.10 42.31 5.52
246 247 0.533755 AAGCTAGATGCATCCACGGC 60.534 55.000 23.06 19.61 45.94 5.68
247 248 1.506493 GAAGCTAGATGCATCCACGG 58.494 55.000 23.06 11.47 45.94 4.94
252 253 2.735663 CGATGTGGAAGCTAGATGCATC 59.264 50.000 19.37 19.37 45.94 3.91
253 254 2.366590 TCGATGTGGAAGCTAGATGCAT 59.633 45.455 0.00 0.00 45.94 3.96
254 255 1.756538 TCGATGTGGAAGCTAGATGCA 59.243 47.619 0.00 0.00 45.94 3.96
255 256 2.515926 TCGATGTGGAAGCTAGATGC 57.484 50.000 0.00 0.00 43.29 3.91
256 257 4.517952 AGATCGATGTGGAAGCTAGATG 57.482 45.455 0.54 0.00 0.00 2.90
257 258 4.586421 TCAAGATCGATGTGGAAGCTAGAT 59.414 41.667 0.54 0.00 0.00 1.98
258 259 3.954258 TCAAGATCGATGTGGAAGCTAGA 59.046 43.478 0.54 0.00 0.00 2.43
259 260 4.313277 TCAAGATCGATGTGGAAGCTAG 57.687 45.455 0.54 0.00 0.00 3.42
260 261 4.342092 TGATCAAGATCGATGTGGAAGCTA 59.658 41.667 0.54 0.00 40.63 3.32
261 262 3.133542 TGATCAAGATCGATGTGGAAGCT 59.866 43.478 0.54 0.00 40.63 3.74
262 263 3.461061 TGATCAAGATCGATGTGGAAGC 58.539 45.455 0.54 0.00 40.63 3.86
263 264 5.006455 CACTTGATCAAGATCGATGTGGAAG 59.994 44.000 36.15 10.66 40.79 3.46
264 265 4.872124 CACTTGATCAAGATCGATGTGGAA 59.128 41.667 36.15 0.00 40.79 3.53
265 266 4.436332 CACTTGATCAAGATCGATGTGGA 58.564 43.478 36.15 1.10 40.79 4.02
266 267 3.002042 GCACTTGATCAAGATCGATGTGG 59.998 47.826 36.15 16.35 40.79 4.17
267 268 3.619929 TGCACTTGATCAAGATCGATGTG 59.380 43.478 36.15 24.36 40.79 3.21
268 269 3.865446 TGCACTTGATCAAGATCGATGT 58.135 40.909 36.15 14.46 40.79 3.06
269 270 4.870221 TTGCACTTGATCAAGATCGATG 57.130 40.909 36.15 25.00 40.79 3.84
270 271 4.210746 CGATTGCACTTGATCAAGATCGAT 59.789 41.667 32.79 27.65 40.66 3.59
271 272 3.553105 CGATTGCACTTGATCAAGATCGA 59.447 43.478 32.79 25.42 40.66 3.59
272 273 3.308053 ACGATTGCACTTGATCAAGATCG 59.692 43.478 33.54 33.54 42.28 3.69
273 274 4.569966 AGACGATTGCACTTGATCAAGATC 59.430 41.667 36.15 26.21 40.79 2.75
274 275 4.331992 CAGACGATTGCACTTGATCAAGAT 59.668 41.667 36.15 21.63 40.79 2.40
275 276 3.681417 CAGACGATTGCACTTGATCAAGA 59.319 43.478 36.15 18.08 40.79 3.02
276 277 3.181513 CCAGACGATTGCACTTGATCAAG 60.182 47.826 29.74 29.74 43.79 3.02
277 278 2.743664 CCAGACGATTGCACTTGATCAA 59.256 45.455 8.12 8.12 0.00 2.57
278 279 2.028203 TCCAGACGATTGCACTTGATCA 60.028 45.455 0.00 0.00 0.00 2.92
279 280 2.606725 CTCCAGACGATTGCACTTGATC 59.393 50.000 0.00 0.00 0.00 2.92
280 281 2.234661 TCTCCAGACGATTGCACTTGAT 59.765 45.455 0.00 0.00 0.00 2.57
281 282 1.618343 TCTCCAGACGATTGCACTTGA 59.382 47.619 0.00 0.00 0.00 3.02
282 283 2.084610 TCTCCAGACGATTGCACTTG 57.915 50.000 0.00 0.00 0.00 3.16
283 284 2.625737 CATCTCCAGACGATTGCACTT 58.374 47.619 0.00 0.00 0.00 3.16
284 285 1.134580 CCATCTCCAGACGATTGCACT 60.135 52.381 0.00 0.00 0.00 4.40
285 286 1.134699 TCCATCTCCAGACGATTGCAC 60.135 52.381 0.00 0.00 0.00 4.57
286 287 1.137675 CTCCATCTCCAGACGATTGCA 59.862 52.381 0.00 0.00 0.00 4.08
287 288 1.410517 TCTCCATCTCCAGACGATTGC 59.589 52.381 0.00 0.00 0.00 3.56
288 289 5.418524 AGATATCTCCATCTCCAGACGATTG 59.581 44.000 0.00 0.00 28.83 2.67
289 290 5.579047 AGATATCTCCATCTCCAGACGATT 58.421 41.667 0.00 0.00 28.83 3.34
290 291 5.191727 AGATATCTCCATCTCCAGACGAT 57.808 43.478 0.00 0.00 28.83 3.73
291 292 4.584874 GAGATATCTCCATCTCCAGACGA 58.415 47.826 20.33 0.00 43.46 4.20
292 293 4.963276 GAGATATCTCCATCTCCAGACG 57.037 50.000 20.33 0.00 43.46 4.18
299 300 5.497464 TCGAGTCAGAGATATCTCCATCT 57.503 43.478 25.88 20.31 43.88 2.90
300 301 5.006649 CGATCGAGTCAGAGATATCTCCATC 59.993 48.000 25.88 17.58 43.88 3.51
301 302 4.875536 CGATCGAGTCAGAGATATCTCCAT 59.124 45.833 25.88 11.72 43.88 3.41
302 303 4.021016 TCGATCGAGTCAGAGATATCTCCA 60.021 45.833 25.88 12.62 43.88 3.86
303 304 4.500127 TCGATCGAGTCAGAGATATCTCC 58.500 47.826 25.88 13.07 43.88 3.71
304 305 5.810074 TCATCGATCGAGTCAGAGATATCTC 59.190 44.000 23.84 22.92 43.17 2.75
305 306 5.729510 TCATCGATCGAGTCAGAGATATCT 58.270 41.667 23.84 4.47 0.00 1.98
306 307 6.415798 TTCATCGATCGAGTCAGAGATATC 57.584 41.667 23.84 0.00 0.00 1.63
307 308 6.597280 TGATTCATCGATCGAGTCAGAGATAT 59.403 38.462 23.84 8.93 0.00 1.63
308 309 5.934625 TGATTCATCGATCGAGTCAGAGATA 59.065 40.000 23.84 4.79 0.00 1.98
309 310 4.759183 TGATTCATCGATCGAGTCAGAGAT 59.241 41.667 23.84 9.75 0.00 2.75
310 311 4.130118 TGATTCATCGATCGAGTCAGAGA 58.870 43.478 23.84 10.79 0.00 3.10
311 312 4.480386 TGATTCATCGATCGAGTCAGAG 57.520 45.455 23.84 8.72 0.00 3.35
312 313 4.900635 TTGATTCATCGATCGAGTCAGA 57.099 40.909 23.84 14.82 0.00 3.27
313 314 5.039984 AGTTTGATTCATCGATCGAGTCAG 58.960 41.667 23.84 12.80 0.00 3.51
314 315 4.800471 CAGTTTGATTCATCGATCGAGTCA 59.200 41.667 23.84 19.38 0.00 3.41
315 316 4.317698 GCAGTTTGATTCATCGATCGAGTC 60.318 45.833 23.84 17.26 0.00 3.36
316 317 3.553511 GCAGTTTGATTCATCGATCGAGT 59.446 43.478 23.84 9.22 0.00 4.18
317 318 3.060003 GGCAGTTTGATTCATCGATCGAG 60.060 47.826 23.84 14.92 0.00 4.04
318 319 2.866156 GGCAGTTTGATTCATCGATCGA 59.134 45.455 21.86 21.86 0.00 3.59
319 320 2.347939 CGGCAGTTTGATTCATCGATCG 60.348 50.000 9.36 9.36 0.00 3.69
320 321 2.032549 CCGGCAGTTTGATTCATCGATC 60.033 50.000 0.00 0.00 0.00 3.69
321 322 1.942657 CCGGCAGTTTGATTCATCGAT 59.057 47.619 0.00 0.00 0.00 3.59
322 323 1.338674 ACCGGCAGTTTGATTCATCGA 60.339 47.619 0.00 0.00 0.00 3.59
323 324 1.062587 GACCGGCAGTTTGATTCATCG 59.937 52.381 0.00 0.00 0.00 3.84
324 325 2.083774 TGACCGGCAGTTTGATTCATC 58.916 47.619 0.00 0.00 0.00 2.92
325 326 1.812571 GTGACCGGCAGTTTGATTCAT 59.187 47.619 0.00 0.00 0.00 2.57
326 327 1.234821 GTGACCGGCAGTTTGATTCA 58.765 50.000 0.00 0.00 0.00 2.57
327 328 1.234821 TGTGACCGGCAGTTTGATTC 58.765 50.000 0.00 0.00 0.00 2.52
328 329 1.909700 ATGTGACCGGCAGTTTGATT 58.090 45.000 0.00 0.00 0.00 2.57
329 330 2.290008 TGTATGTGACCGGCAGTTTGAT 60.290 45.455 0.00 0.00 0.00 2.57
330 331 1.070914 TGTATGTGACCGGCAGTTTGA 59.929 47.619 0.00 0.00 0.00 2.69
331 332 1.464608 CTGTATGTGACCGGCAGTTTG 59.535 52.381 0.00 0.00 0.00 2.93
332 333 1.346395 TCTGTATGTGACCGGCAGTTT 59.654 47.619 0.00 0.00 0.00 2.66
333 334 0.973632 TCTGTATGTGACCGGCAGTT 59.026 50.000 0.00 0.00 0.00 3.16
334 335 0.246635 GTCTGTATGTGACCGGCAGT 59.753 55.000 0.00 0.00 0.00 4.40
335 336 0.246360 TGTCTGTATGTGACCGGCAG 59.754 55.000 0.00 0.00 33.83 4.85
336 337 0.682292 TTGTCTGTATGTGACCGGCA 59.318 50.000 0.00 0.00 33.83 5.69
337 338 1.076332 GTTGTCTGTATGTGACCGGC 58.924 55.000 0.00 0.00 33.83 6.13
338 339 2.337583 CAGTTGTCTGTATGTGACCGG 58.662 52.381 0.00 0.00 36.97 5.28
351 352 1.337821 CGGCGAAGTAGACAGTTGTC 58.662 55.000 0.00 4.09 45.08 3.18
352 353 0.038526 CCGGCGAAGTAGACAGTTGT 60.039 55.000 9.30 0.00 0.00 3.32
353 354 0.242825 TCCGGCGAAGTAGACAGTTG 59.757 55.000 9.30 0.00 0.00 3.16
354 355 1.134560 GATCCGGCGAAGTAGACAGTT 59.865 52.381 9.30 0.00 0.00 3.16
355 356 0.739561 GATCCGGCGAAGTAGACAGT 59.260 55.000 9.30 0.00 0.00 3.55
356 357 0.738975 TGATCCGGCGAAGTAGACAG 59.261 55.000 9.30 0.00 0.00 3.51
357 358 1.135199 GTTGATCCGGCGAAGTAGACA 60.135 52.381 9.30 0.00 0.00 3.41
358 359 1.557651 GTTGATCCGGCGAAGTAGAC 58.442 55.000 9.30 0.00 0.00 2.59
359 360 0.458669 GGTTGATCCGGCGAAGTAGA 59.541 55.000 9.30 0.00 0.00 2.59
360 361 0.460311 AGGTTGATCCGGCGAAGTAG 59.540 55.000 9.30 0.00 41.99 2.57
361 362 1.406539 GTAGGTTGATCCGGCGAAGTA 59.593 52.381 9.30 0.00 41.99 2.24
362 363 0.175073 GTAGGTTGATCCGGCGAAGT 59.825 55.000 9.30 0.00 41.99 3.01
363 364 0.870307 CGTAGGTTGATCCGGCGAAG 60.870 60.000 9.30 0.00 41.99 3.79
364 365 1.140161 CGTAGGTTGATCCGGCGAA 59.860 57.895 9.30 0.00 41.99 4.70
365 366 2.802792 CGTAGGTTGATCCGGCGA 59.197 61.111 9.30 0.00 41.99 5.54
378 379 5.531659 TCAAGCTAGATAGAAGGTTCCGTAG 59.468 44.000 0.00 0.00 32.58 3.51
379 380 5.298777 GTCAAGCTAGATAGAAGGTTCCGTA 59.701 44.000 0.00 0.00 32.58 4.02
380 381 4.098196 GTCAAGCTAGATAGAAGGTTCCGT 59.902 45.833 0.00 0.00 32.58 4.69
381 382 4.339814 AGTCAAGCTAGATAGAAGGTTCCG 59.660 45.833 0.00 0.00 32.58 4.30
382 383 5.361285 TCAGTCAAGCTAGATAGAAGGTTCC 59.639 44.000 0.00 0.00 32.58 3.62
383 384 6.458232 TCAGTCAAGCTAGATAGAAGGTTC 57.542 41.667 0.00 0.00 32.58 3.62
384 385 5.163457 GCTCAGTCAAGCTAGATAGAAGGTT 60.163 44.000 0.00 0.00 39.27 3.50
385 386 4.340950 GCTCAGTCAAGCTAGATAGAAGGT 59.659 45.833 0.00 0.00 39.27 3.50
386 387 4.870363 GCTCAGTCAAGCTAGATAGAAGG 58.130 47.826 0.00 0.00 39.27 3.46
410 411 2.693074 GGCTGTTTCCTCAGGACAAAAA 59.307 45.455 0.00 0.00 36.12 1.94
411 412 2.306847 GGCTGTTTCCTCAGGACAAAA 58.693 47.619 0.00 0.00 36.12 2.44
412 413 1.813862 CGGCTGTTTCCTCAGGACAAA 60.814 52.381 0.00 0.00 36.12 2.83
413 414 0.250295 CGGCTGTTTCCTCAGGACAA 60.250 55.000 0.00 0.00 36.12 3.18
414 415 1.118965 TCGGCTGTTTCCTCAGGACA 61.119 55.000 0.00 0.00 36.12 4.02
415 416 0.250513 ATCGGCTGTTTCCTCAGGAC 59.749 55.000 0.00 0.00 36.12 3.85
416 417 0.537188 GATCGGCTGTTTCCTCAGGA 59.463 55.000 0.00 0.00 36.12 3.86
417 418 0.539051 AGATCGGCTGTTTCCTCAGG 59.461 55.000 0.00 0.00 36.12 3.86
418 419 2.428890 ACTAGATCGGCTGTTTCCTCAG 59.571 50.000 0.00 0.00 38.35 3.35
419 420 2.457598 ACTAGATCGGCTGTTTCCTCA 58.542 47.619 0.00 0.00 0.00 3.86
420 421 4.857509 ATACTAGATCGGCTGTTTCCTC 57.142 45.455 0.00 0.00 0.00 3.71
421 422 4.649674 TGAATACTAGATCGGCTGTTTCCT 59.350 41.667 0.00 0.00 0.00 3.36
422 423 4.945246 TGAATACTAGATCGGCTGTTTCC 58.055 43.478 0.00 0.00 0.00 3.13
423 424 6.216569 TGATGAATACTAGATCGGCTGTTTC 58.783 40.000 0.00 0.00 0.00 2.78
424 425 6.161855 TGATGAATACTAGATCGGCTGTTT 57.838 37.500 0.00 0.00 0.00 2.83
425 426 5.791336 TGATGAATACTAGATCGGCTGTT 57.209 39.130 0.00 0.00 0.00 3.16
426 427 5.337089 CCATGATGAATACTAGATCGGCTGT 60.337 44.000 0.00 0.00 0.00 4.40
427 428 5.107824 CCATGATGAATACTAGATCGGCTG 58.892 45.833 0.00 0.00 0.00 4.85
428 429 4.382470 GCCATGATGAATACTAGATCGGCT 60.382 45.833 0.00 0.00 0.00 5.52
429 430 3.868077 GCCATGATGAATACTAGATCGGC 59.132 47.826 0.00 0.00 0.00 5.54
430 431 5.077134 TGCCATGATGAATACTAGATCGG 57.923 43.478 0.00 0.00 0.00 4.18
431 432 5.522824 CCATGCCATGATGAATACTAGATCG 59.477 44.000 6.18 0.00 0.00 3.69
432 433 5.296283 GCCATGCCATGATGAATACTAGATC 59.704 44.000 6.18 0.00 0.00 2.75
433 434 5.045066 AGCCATGCCATGATGAATACTAGAT 60.045 40.000 6.18 0.00 0.00 1.98
434 435 4.287845 AGCCATGCCATGATGAATACTAGA 59.712 41.667 6.18 0.00 0.00 2.43
435 436 4.395231 CAGCCATGCCATGATGAATACTAG 59.605 45.833 6.18 0.00 0.00 2.57
436 437 4.202493 ACAGCCATGCCATGATGAATACTA 60.202 41.667 6.18 0.00 0.00 1.82
437 438 3.154710 CAGCCATGCCATGATGAATACT 58.845 45.455 6.18 0.00 0.00 2.12
438 439 2.889045 ACAGCCATGCCATGATGAATAC 59.111 45.455 6.18 0.00 0.00 1.89
439 440 3.232720 ACAGCCATGCCATGATGAATA 57.767 42.857 6.18 0.00 0.00 1.75
440 441 2.082140 ACAGCCATGCCATGATGAAT 57.918 45.000 6.18 0.00 0.00 2.57
441 442 2.300433 GTACAGCCATGCCATGATGAA 58.700 47.619 6.18 0.00 0.00 2.57
442 443 1.212441 TGTACAGCCATGCCATGATGA 59.788 47.619 6.18 0.00 0.00 2.92
443 444 1.682740 TGTACAGCCATGCCATGATG 58.317 50.000 6.18 7.25 0.00 3.07
444 445 2.440517 TTGTACAGCCATGCCATGAT 57.559 45.000 6.18 0.00 0.00 2.45
445 446 2.212812 TTTGTACAGCCATGCCATGA 57.787 45.000 6.18 0.00 0.00 3.07
446 447 2.995258 GTTTTTGTACAGCCATGCCATG 59.005 45.455 0.00 0.00 0.00 3.66
447 448 2.632028 TGTTTTTGTACAGCCATGCCAT 59.368 40.909 0.00 0.00 0.00 4.40
448 449 2.034878 TGTTTTTGTACAGCCATGCCA 58.965 42.857 0.00 0.00 0.00 4.92
449 450 2.223923 TGTGTTTTTGTACAGCCATGCC 60.224 45.455 0.00 0.00 0.00 4.40
450 451 3.090952 TGTGTTTTTGTACAGCCATGC 57.909 42.857 0.00 0.00 0.00 4.06
451 452 6.414408 TTTTTGTGTTTTTGTACAGCCATG 57.586 33.333 0.00 0.00 0.00 3.66
452 453 8.608317 GTTATTTTTGTGTTTTTGTACAGCCAT 58.392 29.630 0.00 0.00 0.00 4.40
453 454 7.602644 TGTTATTTTTGTGTTTTTGTACAGCCA 59.397 29.630 0.00 0.00 0.00 4.75
454 455 7.965045 TGTTATTTTTGTGTTTTTGTACAGCC 58.035 30.769 0.00 0.00 0.00 4.85
455 456 9.813080 TTTGTTATTTTTGTGTTTTTGTACAGC 57.187 25.926 0.00 0.00 0.00 4.40
473 474 9.382275 GGGCATGAATGTATTCTTTTTGTTATT 57.618 29.630 0.00 0.00 37.67 1.40
474 475 7.706179 CGGGCATGAATGTATTCTTTTTGTTAT 59.294 33.333 0.00 0.00 37.67 1.89
475 476 7.032580 CGGGCATGAATGTATTCTTTTTGTTA 58.967 34.615 0.00 0.00 37.67 2.41
476 477 5.868801 CGGGCATGAATGTATTCTTTTTGTT 59.131 36.000 0.00 0.00 37.67 2.83
477 478 5.184864 TCGGGCATGAATGTATTCTTTTTGT 59.815 36.000 0.00 0.00 37.67 2.83
478 479 5.649557 TCGGGCATGAATGTATTCTTTTTG 58.350 37.500 0.00 1.36 37.67 2.44
479 480 5.679638 GCTCGGGCATGAATGTATTCTTTTT 60.680 40.000 0.00 0.00 36.76 1.94
480 481 4.202050 GCTCGGGCATGAATGTATTCTTTT 60.202 41.667 0.00 0.00 36.76 2.27
481 482 3.316308 GCTCGGGCATGAATGTATTCTTT 59.684 43.478 0.00 0.00 36.76 2.52
482 483 2.880890 GCTCGGGCATGAATGTATTCTT 59.119 45.455 0.00 0.00 36.76 2.52
483 484 2.105477 AGCTCGGGCATGAATGTATTCT 59.895 45.455 11.40 0.00 41.70 2.40
484 485 2.498167 AGCTCGGGCATGAATGTATTC 58.502 47.619 11.40 0.00 41.70 1.75
485 486 2.645838 AGCTCGGGCATGAATGTATT 57.354 45.000 11.40 0.00 41.70 1.89
486 487 2.645838 AAGCTCGGGCATGAATGTAT 57.354 45.000 11.40 0.00 41.70 2.29
487 488 3.552132 TTAAGCTCGGGCATGAATGTA 57.448 42.857 11.40 0.00 41.70 2.29
488 489 2.418368 TTAAGCTCGGGCATGAATGT 57.582 45.000 11.40 0.00 41.70 2.71
489 490 3.996150 AATTAAGCTCGGGCATGAATG 57.004 42.857 11.40 0.00 41.70 2.67
490 491 4.973168 TCTAATTAAGCTCGGGCATGAAT 58.027 39.130 11.40 2.29 41.70 2.57
491 492 4.380531 CTCTAATTAAGCTCGGGCATGAA 58.619 43.478 11.40 0.00 41.70 2.57
492 493 3.803715 GCTCTAATTAAGCTCGGGCATGA 60.804 47.826 11.40 0.00 41.70 3.07
493 494 2.481952 GCTCTAATTAAGCTCGGGCATG 59.518 50.000 11.40 0.00 41.70 4.06
494 495 2.772287 GCTCTAATTAAGCTCGGGCAT 58.228 47.619 11.40 0.00 41.70 4.40
495 496 1.538204 CGCTCTAATTAAGCTCGGGCA 60.538 52.381 11.40 0.00 41.70 5.36
548 549 2.902705 TACGCTCACCACCATATTCC 57.097 50.000 0.00 0.00 0.00 3.01
556 557 3.733236 TGTGCTATACGCTCACCAC 57.267 52.632 0.00 0.00 37.22 4.16
723 724 1.741401 CGGCATGTGTCACGGTCAT 60.741 57.895 0.00 0.00 0.00 3.06
729 730 3.281341 TGATTTTTCGGCATGTGTCAC 57.719 42.857 0.00 0.00 0.00 3.67
880 881 6.208988 TGTAGATGTAGTAGAGCAAGGTTG 57.791 41.667 0.00 0.00 0.00 3.77
881 882 6.684111 GCATGTAGATGTAGTAGAGCAAGGTT 60.684 42.308 1.37 0.00 31.50 3.50
883 884 5.221322 TGCATGTAGATGTAGTAGAGCAAGG 60.221 44.000 1.37 0.00 31.50 3.61
885 886 5.451937 GGTGCATGTAGATGTAGTAGAGCAA 60.452 44.000 1.37 0.00 31.50 3.91
928 941 1.130561 GTTGCTCCGTAACAGAATGGC 59.869 52.381 0.00 0.00 43.62 4.40
982 995 2.435805 TCATGGTTCTTGCCTAGCTAGG 59.564 50.000 32.12 32.12 46.42 3.02
988 1001 1.678728 CGCCTTCATGGTTCTTGCCTA 60.679 52.381 0.00 0.00 38.35 3.93
991 1004 1.508088 CCGCCTTCATGGTTCTTGC 59.492 57.895 0.00 0.00 38.35 4.01
1638 1651 2.415010 CCGAGGAGGAGCACGATG 59.585 66.667 0.00 0.00 45.00 3.84
1719 1733 5.835911 ATCACAAATAAGCTCGATCGATG 57.164 39.130 19.78 14.26 0.00 3.84
1797 1811 5.761165 TTTAAAGTTTGTACAGGAGCACC 57.239 39.130 0.00 0.00 0.00 5.01
1852 3839 5.872963 TGTATGCTCCAAATATGCATCTCT 58.127 37.500 0.19 0.00 44.91 3.10
1855 3842 6.754702 ATCTGTATGCTCCAAATATGCATC 57.245 37.500 0.19 0.00 44.91 3.91
1889 3876 0.831711 GGGGCTTGCTCCCTTTTTCA 60.832 55.000 0.00 0.00 45.80 2.69
1923 3969 2.892784 GGCTCTAAATAGTGAGGCGT 57.107 50.000 0.00 0.00 43.89 5.68
1981 4029 1.599518 CTGCTGCACCGGGTGTTTA 60.600 57.895 26.86 13.56 35.75 2.01
2043 4105 0.981183 AAAGATGGGTCAGCGGTACA 59.019 50.000 0.00 0.00 0.00 2.90
2162 4226 2.363795 AATGGAGTCTCGGGGCGA 60.364 61.111 0.00 0.00 0.00 5.54
2181 4246 1.822990 GTGGGTCTCGTCAGAATGGTA 59.177 52.381 0.00 0.00 36.16 3.25
2205 4270 0.941936 TCGTACGTACCGTGTCGACA 60.942 55.000 15.76 15.76 41.39 4.35
2219 4284 2.126189 GGTGGAGTGGCGTCGTAC 60.126 66.667 0.00 0.00 0.00 3.67
2282 4349 4.083862 GGCGTCACACCCCCTCTC 62.084 72.222 0.00 0.00 0.00 3.20
2319 4386 1.071385 CTTGGATCTGATTCTCCCGGG 59.929 57.143 16.85 16.85 0.00 5.73
2338 4406 2.893489 GTCATTTGCTCCAAGGGAAACT 59.107 45.455 0.00 0.00 30.00 2.66
2346 4414 2.795329 GAGAAGGGTCATTTGCTCCAA 58.205 47.619 0.00 0.00 0.00 3.53
2399 4467 2.482333 CCGGAGAGATCGCGAAGGT 61.482 63.158 15.24 0.00 0.00 3.50
2441 4509 2.492484 GCTTCGTCTACCTCTTTGGAGA 59.508 50.000 0.00 0.00 41.86 3.71
2472 4540 0.888619 CTTGCCGGACTAGACAGTGA 59.111 55.000 5.05 0.00 34.21 3.41
2512 4580 2.435418 GATGGTCCCATCGAGCTCT 58.565 57.895 12.85 0.00 42.55 4.09
2528 4596 1.070758 GTAGGGCATCGTCATGGTGAT 59.929 52.381 0.00 0.00 0.00 3.06
2529 4597 0.464036 GTAGGGCATCGTCATGGTGA 59.536 55.000 0.00 0.00 0.00 4.02
2547 4615 0.320697 GACACCGCTAACCTCCTTGT 59.679 55.000 0.00 0.00 0.00 3.16
2561 4629 1.133458 GACGACGTCTACGGACACC 59.867 63.158 20.52 0.00 44.95 4.16
2610 4678 5.897824 AGGAACTATCACGGAGGAGAAATTA 59.102 40.000 0.00 0.00 36.02 1.40
2621 4689 3.262420 CTGGTTCAAGGAACTATCACGG 58.738 50.000 8.79 0.00 41.70 4.94
2622 4690 3.056107 TCCTGGTTCAAGGAACTATCACG 60.056 47.826 8.79 0.00 43.57 4.35
2623 4691 4.223032 TCTCCTGGTTCAAGGAACTATCAC 59.777 45.833 8.79 0.00 45.81 3.06
2631 4699 0.979665 CTGCTCTCCTGGTTCAAGGA 59.020 55.000 0.00 0.00 44.35 3.36
2665 4733 3.055602 TCTGTTGGTGGACATCTCTGATG 60.056 47.826 6.06 6.06 0.00 3.07
2674 4742 3.020984 GTTCCTTTTCTGTTGGTGGACA 58.979 45.455 0.00 0.00 0.00 4.02
2686 4754 2.544267 CCTGACACGTCTGTTCCTTTTC 59.456 50.000 0.00 0.00 0.00 2.29
2688 4756 1.485066 ACCTGACACGTCTGTTCCTTT 59.515 47.619 0.00 0.00 0.00 3.11
2689 4757 1.120530 ACCTGACACGTCTGTTCCTT 58.879 50.000 0.00 0.00 0.00 3.36
2692 4760 2.218953 TTCACCTGACACGTCTGTTC 57.781 50.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.