Multiple sequence alignment - TraesCS7A01G328400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G328400 chr7A 100.000 4606 0 0 1 4606 477237762 477233157 0.000000e+00 8506.0
1 TraesCS7A01G328400 chr7A 90.775 271 14 5 300 559 736327485 736327755 7.330000e-93 351.0
2 TraesCS7A01G328400 chr7A 91.304 92 7 1 4400 4490 75596453 75596362 1.740000e-24 124.0
3 TraesCS7A01G328400 chr7A 88.889 99 9 2 4393 4490 43042404 43042501 2.250000e-23 121.0
4 TraesCS7A01G328400 chr7B 95.205 2002 64 9 839 2832 429195256 429193279 0.000000e+00 3136.0
5 TraesCS7A01G328400 chr7B 96.549 1130 34 5 2950 4078 429193263 429192138 0.000000e+00 1866.0
6 TraesCS7A01G328400 chr7B 84.156 871 121 13 1561 2420 153750645 153749781 0.000000e+00 828.0
7 TraesCS7A01G328400 chr7B 98.056 360 6 1 4074 4433 337933331 337933689 3.910000e-175 625.0
8 TraesCS7A01G328400 chr7B 83.848 421 48 11 2419 2830 153749678 153749269 2.600000e-102 383.0
9 TraesCS7A01G328400 chr7B 95.000 120 4 1 4489 4606 429192150 429192031 2.190000e-43 187.0
10 TraesCS7A01G328400 chr7B 80.870 230 27 13 1 217 429196104 429195879 1.030000e-36 165.0
11 TraesCS7A01G328400 chr7B 84.071 113 11 6 2 113 736089378 736089272 8.150000e-18 102.0
12 TraesCS7A01G328400 chr7B 97.500 40 1 0 4451 4490 337933690 337933729 8.270000e-08 69.4
13 TraesCS7A01G328400 chr7B 100.000 28 0 0 2914 2941 429193280 429193253 8.000000e-03 52.8
14 TraesCS7A01G328400 chr7D 96.738 1686 44 6 1009 2692 415438056 415436380 0.000000e+00 2798.0
15 TraesCS7A01G328400 chr7D 95.775 1065 36 2 3014 4078 415436368 415435313 0.000000e+00 1709.0
16 TraesCS7A01G328400 chr7D 96.657 359 5 2 4074 4432 299592432 299592783 1.430000e-164 590.0
17 TraesCS7A01G328400 chr7D 90.823 316 15 5 841 1154 415438315 415438012 1.190000e-110 411.0
18 TraesCS7A01G328400 chr7D 90.446 314 13 10 4 300 415438672 415438359 9.290000e-107 398.0
19 TraesCS7A01G328400 chr7D 95.763 118 5 0 4489 4606 415435325 415435208 1.690000e-44 191.0
20 TraesCS7A01G328400 chr7D 81.897 116 14 4 2 116 13698850 13698741 1.760000e-14 91.6
21 TraesCS7A01G328400 chr7D 98.039 51 1 0 4440 4490 299592774 299592824 6.350000e-14 89.8
22 TraesCS7A01G328400 chr6D 90.620 597 38 10 1748 2341 417647021 417646440 0.000000e+00 776.0
23 TraesCS7A01G328400 chr5B 85.432 556 62 10 300 841 474767851 474767301 1.120000e-155 560.0
24 TraesCS7A01G328400 chr5B 81.579 114 12 6 2 113 543929570 543929676 8.210000e-13 86.1
25 TraesCS7A01G328400 chr2B 81.622 555 67 13 300 841 608941205 608940673 1.180000e-115 427.0
26 TraesCS7A01G328400 chr2B 84.615 117 13 5 4491 4605 280486000 280485887 1.350000e-20 111.0
27 TraesCS7A01G328400 chr6B 88.663 344 24 4 1759 2101 626378298 626377969 5.550000e-109 405.0
28 TraesCS7A01G328400 chr6B 82.258 124 14 7 4 124 709260153 709260035 2.930000e-17 100.0
29 TraesCS7A01G328400 chr2D 91.873 283 21 1 559 839 36275145 36275427 1.200000e-105 394.0
30 TraesCS7A01G328400 chr2D 90.657 289 24 2 559 844 35028836 35029124 9.350000e-102 381.0
31 TraesCS7A01G328400 chr2D 90.559 286 24 2 559 841 131235472 131235757 4.350000e-100 375.0
32 TraesCS7A01G328400 chr2D 94.175 103 6 0 2816 2918 296173775 296173673 1.720000e-34 158.0
33 TraesCS7A01G328400 chr2D 95.050 101 1 3 2831 2930 15682984 15682887 6.170000e-34 156.0
34 TraesCS7A01G328400 chr6A 90.877 285 24 1 559 841 615672579 615672863 9.350000e-102 381.0
35 TraesCS7A01G328400 chr6A 90.559 286 24 2 559 841 466295013 466294728 4.350000e-100 375.0
36 TraesCS7A01G328400 chr6A 83.810 105 11 4 1 104 599757206 599757107 1.360000e-15 95.3
37 TraesCS7A01G328400 chr5D 91.367 278 22 1 559 834 104117793 104117516 3.360000e-101 379.0
38 TraesCS7A01G328400 chr5D 85.470 117 11 6 4491 4605 543504358 543504246 2.910000e-22 117.0
39 TraesCS7A01G328400 chr4D 90.877 285 23 2 559 841 74226221 74225938 3.360000e-101 379.0
40 TraesCS7A01G328400 chr4D 91.078 269 15 4 300 559 291747445 291747177 5.670000e-94 355.0
41 TraesCS7A01G328400 chr1A 90.877 285 23 2 559 841 121359852 121360135 3.360000e-101 379.0
42 TraesCS7A01G328400 chr1A 91.538 260 20 2 300 558 415755617 415755875 1.580000e-94 357.0
43 TraesCS7A01G328400 chr5A 89.456 294 29 2 559 850 228894985 228895278 2.020000e-98 370.0
44 TraesCS7A01G328400 chr5A 91.078 269 16 3 300 560 36162457 36162725 1.580000e-94 357.0
45 TraesCS7A01G328400 chr5A 90.741 270 16 4 300 560 36128838 36129107 7.330000e-93 351.0
46 TraesCS7A01G328400 chr5A 90.146 274 18 4 300 565 36045799 36046071 9.480000e-92 348.0
47 TraesCS7A01G328400 chr5A 87.285 291 25 7 300 581 567885506 567885219 5.750000e-84 322.0
48 TraesCS7A01G328400 chr5A 95.960 99 2 2 2821 2918 660790506 660790603 4.770000e-35 159.0
49 TraesCS7A01G328400 chr5A 92.857 70 5 0 4425 4494 554297853 554297784 8.150000e-18 102.0
50 TraesCS7A01G328400 chr4A 91.078 269 15 4 300 559 689623947 689623679 5.670000e-94 355.0
51 TraesCS7A01G328400 chr4A 91.045 268 15 4 300 558 613414481 613414214 2.040000e-93 353.0
52 TraesCS7A01G328400 chr4A 89.655 116 12 0 4489 4604 75927212 75927097 1.030000e-31 148.0
53 TraesCS7A01G328400 chr4A 92.857 42 2 1 2757 2797 681714855 681714814 4.980000e-05 60.2
54 TraesCS7A01G328400 chr3A 90.977 266 15 5 300 556 63188738 63189003 2.640000e-92 350.0
55 TraesCS7A01G328400 chr3A 92.661 109 7 1 2817 2924 170384510 170384402 6.170000e-34 156.0
56 TraesCS7A01G328400 chr3A 90.411 73 6 1 53 124 137573490 137573418 1.360000e-15 95.3
57 TraesCS7A01G328400 chr3B 86.458 288 27 7 281 558 471796778 471797063 5.790000e-79 305.0
58 TraesCS7A01G328400 chr3B 96.842 95 3 0 2824 2918 723452951 723452857 4.770000e-35 159.0
59 TraesCS7A01G328400 chr3B 85.217 115 11 6 4491 4603 578285358 578285468 3.770000e-21 113.0
60 TraesCS7A01G328400 chr3B 79.839 124 18 5 2 124 100975390 100975507 2.950000e-12 84.2
61 TraesCS7A01G328400 chr3B 82.524 103 10 5 2 103 156874316 156874221 2.950000e-12 84.2
62 TraesCS7A01G328400 chr2A 87.898 157 17 2 282 436 203362894 203362738 2.830000e-42 183.0
63 TraesCS7A01G328400 chr2A 92.373 118 9 0 4489 4606 640274366 640274249 7.930000e-38 169.0
64 TraesCS7A01G328400 chr2A 95.050 101 5 0 2828 2928 712971382 712971482 4.770000e-35 159.0
65 TraesCS7A01G328400 chr1B 94.340 106 1 4 2816 2919 436383763 436383661 1.720000e-34 158.0
66 TraesCS7A01G328400 chr1B 93.878 98 5 1 2829 2925 323632982 323632885 3.710000e-31 147.0
67 TraesCS7A01G328400 chr1B 83.898 118 14 4 4492 4605 632210622 632210506 1.750000e-19 108.0
68 TraesCS7A01G328400 chr1D 90.517 116 11 0 4489 4604 452644352 452644467 2.220000e-33 154.0
69 TraesCS7A01G328400 chrUn 91.743 109 8 1 2817 2924 397151957 397152065 2.870000e-32 150.0
70 TraesCS7A01G328400 chrUn 91.011 89 7 1 4400 4487 1186077 1186165 8.100000e-23 119.0
71 TraesCS7A01G328400 chr4B 92.857 42 2 1 2757 2797 597976300 597976341 4.980000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G328400 chr7A 477233157 477237762 4605 True 8506.00 8506 100.0000 1 4606 1 chr7A.!!$R2 4605
1 TraesCS7A01G328400 chr7B 429192031 429196104 4073 True 1081.36 3136 93.5248 1 4606 5 chr7B.!!$R3 4605
2 TraesCS7A01G328400 chr7B 153749269 153750645 1376 True 605.50 828 84.0020 1561 2830 2 chr7B.!!$R2 1269
3 TraesCS7A01G328400 chr7D 415435208 415438672 3464 True 1101.40 2798 93.9090 4 4606 5 chr7D.!!$R2 4602
4 TraesCS7A01G328400 chr6D 417646440 417647021 581 True 776.00 776 90.6200 1748 2341 1 chr6D.!!$R1 593
5 TraesCS7A01G328400 chr5B 474767301 474767851 550 True 560.00 560 85.4320 300 841 1 chr5B.!!$R1 541
6 TraesCS7A01G328400 chr2B 608940673 608941205 532 True 427.00 427 81.6220 300 841 1 chr2B.!!$R2 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 829 0.178975 ATGGAACCCACGCAAAAGGA 60.179 50.0 0.00 0.00 35.80 3.36 F
1446 1897 0.322975 TTGCTCTCCTCAGCTTCCAC 59.677 55.0 0.00 0.00 40.39 4.02 F
2190 2653 0.883814 CTCATCAGATTCCGGCTGCC 60.884 60.0 9.11 9.11 33.45 4.85 F
2845 3427 1.200519 CAATTACTCCCTCCGTCCCA 58.799 55.0 0.00 0.00 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 2230 0.244721 GATCAACAAAGCCCAGCACC 59.755 55.0 0.0 0.00 0.00 5.01 R
2898 3480 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.0 0.0 0.00 0.00 4.00 R
3073 3655 0.478072 ATGAACCACAACTCAGGGCA 59.522 50.0 0.0 0.00 0.00 5.36 R
4490 5073 0.317020 GTGCGAAAACCTGACAGCAC 60.317 55.0 0.0 2.63 46.03 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.701539 TCACAAAAATCATAGTACAAGCCAT 57.298 32.000 0.00 0.00 0.00 4.40
114 117 6.806249 TGCACAAAGAAACACAACTAAGAAAG 59.194 34.615 0.00 0.00 0.00 2.62
168 183 3.591527 AGTGATATCTCCAACCCACCAAA 59.408 43.478 3.98 0.00 0.00 3.28
187 202 2.957402 AGTTCAAATCAGGGTGCTCA 57.043 45.000 0.00 0.00 0.00 4.26
277 403 1.604604 CCTTCACATCAACACCCGTT 58.395 50.000 0.00 0.00 35.01 4.44
304 430 1.067142 AGTGACATACAACGCGGTGAT 60.067 47.619 34.07 17.04 0.00 3.06
310 436 4.714851 ACATACAACGCGGTGATTTAAAC 58.285 39.130 34.07 0.00 0.00 2.01
376 502 1.213296 AGTCACCTGACCACACCTTT 58.787 50.000 1.66 0.00 45.85 3.11
381 507 0.474184 CCTGACCACACCTTTCCACT 59.526 55.000 0.00 0.00 0.00 4.00
382 508 1.133792 CCTGACCACACCTTTCCACTT 60.134 52.381 0.00 0.00 0.00 3.16
383 509 2.654863 CTGACCACACCTTTCCACTTT 58.345 47.619 0.00 0.00 0.00 2.66
384 510 2.358898 CTGACCACACCTTTCCACTTTG 59.641 50.000 0.00 0.00 0.00 2.77
388 514 3.580895 ACCACACCTTTCCACTTTGTTTT 59.419 39.130 0.00 0.00 0.00 2.43
389 515 4.041075 ACCACACCTTTCCACTTTGTTTTT 59.959 37.500 0.00 0.00 0.00 1.94
445 573 9.457436 GGGATGACTTATAAGTTTTAAGTTGGA 57.543 33.333 18.96 7.63 39.40 3.53
501 629 5.948842 ACTTATAAGTTGGGTCTGTTTGGT 58.051 37.500 12.50 0.00 35.21 3.67
643 780 6.605471 ACTTATAAGTCACCTGATCACACA 57.395 37.500 12.50 0.00 32.86 3.72
651 788 4.516698 GTCACCTGATCACACATTTTCACT 59.483 41.667 0.00 0.00 0.00 3.41
652 789 5.009010 GTCACCTGATCACACATTTTCACTT 59.991 40.000 0.00 0.00 0.00 3.16
653 790 5.593909 TCACCTGATCACACATTTTCACTTT 59.406 36.000 0.00 0.00 0.00 2.66
654 791 5.688621 CACCTGATCACACATTTTCACTTTG 59.311 40.000 0.00 0.00 0.00 2.77
655 792 5.360714 ACCTGATCACACATTTTCACTTTGT 59.639 36.000 0.00 0.00 0.00 2.83
657 794 6.757947 CCTGATCACACATTTTCACTTTGTTT 59.242 34.615 0.00 0.00 0.00 2.83
658 795 7.278424 CCTGATCACACATTTTCACTTTGTTTT 59.722 33.333 0.00 0.00 0.00 2.43
659 796 8.545229 TGATCACACATTTTCACTTTGTTTTT 57.455 26.923 0.00 0.00 0.00 1.94
692 829 0.178975 ATGGAACCCACGCAAAAGGA 60.179 50.000 0.00 0.00 35.80 3.36
716 853 9.498176 GGAGGTGACTTATAAGTTTTAAGTTGA 57.502 33.333 18.96 7.23 44.43 3.18
752 889 4.901197 TGACTTATAAGTTGGGCTGACA 57.099 40.909 18.96 7.33 39.88 3.58
756 893 8.257602 TGACTTATAAGTTGGGCTGACATATA 57.742 34.615 18.96 0.00 39.88 0.86
760 897 9.561069 CTTATAAGTTGGGCTGACATATAAGTT 57.439 33.333 17.56 0.00 36.96 2.66
780 917 4.592778 AGTTGGGTCTGTTTGGCAAAATAT 59.407 37.500 15.29 0.00 0.00 1.28
845 1207 8.801882 TTGAAACCAAATAGACCCTTATACTG 57.198 34.615 0.00 0.00 0.00 2.74
849 1211 7.983166 ACCAAATAGACCCTTATACTGTACA 57.017 36.000 0.00 0.00 0.00 2.90
867 1229 7.159372 ACTGTACAAACTCGAAATTATGAGGT 58.841 34.615 10.58 2.38 36.53 3.85
1395 1846 1.903877 CGACCAGCCCCTTCATCACT 61.904 60.000 0.00 0.00 0.00 3.41
1428 1879 2.391724 TTTGCTCGGCGGAGAACCTT 62.392 55.000 24.11 0.00 43.27 3.50
1446 1897 0.322975 TTGCTCTCCTCAGCTTCCAC 59.677 55.000 0.00 0.00 40.39 4.02
1743 2200 1.704641 AGAAAGGGGCAACAGTTTCC 58.295 50.000 0.00 0.00 39.45 3.13
1773 2230 1.135402 GTGATTGCTTTACAAGGCGGG 60.135 52.381 0.00 0.00 42.87 6.13
1788 2245 2.524148 GGGGTGCTGGGCTTTGTT 60.524 61.111 0.00 0.00 0.00 2.83
1995 2453 2.760092 TGCTATCAAAACCAGCATTCCC 59.240 45.455 0.00 0.00 40.26 3.97
2064 2523 4.322349 CCAACTGAGGAGAAGGAAGTACAG 60.322 50.000 0.00 0.00 0.00 2.74
2190 2653 0.883814 CTCATCAGATTCCGGCTGCC 60.884 60.000 9.11 9.11 33.45 4.85
2676 3258 9.754382 CCGACAGTAATACTTAAGGCTTAAATA 57.246 33.333 19.46 14.91 0.00 1.40
2838 3420 8.910351 AAGTATTTGCTATCAATTACTCCCTC 57.090 34.615 12.02 0.00 43.22 4.30
2839 3421 7.454225 AGTATTTGCTATCAATTACTCCCTCC 58.546 38.462 7.66 0.00 41.67 4.30
2840 3422 4.336889 TTGCTATCAATTACTCCCTCCG 57.663 45.455 0.00 0.00 0.00 4.63
2841 3423 3.305720 TGCTATCAATTACTCCCTCCGT 58.694 45.455 0.00 0.00 0.00 4.69
2842 3424 3.321111 TGCTATCAATTACTCCCTCCGTC 59.679 47.826 0.00 0.00 0.00 4.79
2843 3425 3.306156 GCTATCAATTACTCCCTCCGTCC 60.306 52.174 0.00 0.00 0.00 4.79
2844 3426 1.492764 TCAATTACTCCCTCCGTCCC 58.507 55.000 0.00 0.00 0.00 4.46
2845 3427 1.200519 CAATTACTCCCTCCGTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
2846 3428 1.768870 CAATTACTCCCTCCGTCCCAT 59.231 52.381 0.00 0.00 0.00 4.00
2847 3429 2.969950 CAATTACTCCCTCCGTCCCATA 59.030 50.000 0.00 0.00 0.00 2.74
2848 3430 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2849 3431 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
2850 3432 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
2851 3433 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2852 3434 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2853 3435 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2854 3436 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2855 3437 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2856 3438 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
2857 3439 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
2858 3440 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
2859 3441 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
2860 3442 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
2861 3443 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
2862 3444 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
2863 3445 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
2864 3446 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
2865 3447 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
2866 3448 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
2867 3449 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
2868 3450 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
2869 3451 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
2872 3454 8.773404 AATATAAGAGCGTTTTTGACACTAGT 57.227 30.769 0.00 0.00 0.00 2.57
2873 3455 4.795970 AAGAGCGTTTTTGACACTAGTG 57.204 40.909 21.44 21.44 0.00 2.74
2875 3457 4.940463 AGAGCGTTTTTGACACTAGTGTA 58.060 39.130 27.98 11.50 45.05 2.90
2876 3458 4.982916 AGAGCGTTTTTGACACTAGTGTAG 59.017 41.667 27.98 13.76 45.05 2.74
2877 3459 4.690122 AGCGTTTTTGACACTAGTGTAGT 58.310 39.130 27.98 6.32 45.05 2.73
2890 3472 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
2891 3473 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
2892 3474 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
2893 3475 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
2894 3476 7.781548 AGTGTAGTGTCAAAAACGTTCTTAT 57.218 32.000 0.00 0.00 0.00 1.73
2895 3477 8.876275 AGTGTAGTGTCAAAAACGTTCTTATA 57.124 30.769 0.00 0.00 0.00 0.98
2896 3478 9.485206 AGTGTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 0.00 0.00 0.00 0.86
2902 3484 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
2903 3485 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
2904 3486 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
2905 3487 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
2906 3488 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
2907 3489 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
2908 3490 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
2909 3491 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
2910 3492 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
2911 3493 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
2912 3494 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2941 3523 3.751175 TCTACCTTGTTTTGCCAATCTCG 59.249 43.478 0.00 0.00 0.00 4.04
2942 3524 2.582052 ACCTTGTTTTGCCAATCTCGA 58.418 42.857 0.00 0.00 0.00 4.04
2943 3525 3.157087 ACCTTGTTTTGCCAATCTCGAT 58.843 40.909 0.00 0.00 0.00 3.59
2946 3528 4.142315 CCTTGTTTTGCCAATCTCGATGAT 60.142 41.667 0.00 0.00 36.89 2.45
2947 3529 5.066375 CCTTGTTTTGCCAATCTCGATGATA 59.934 40.000 0.00 0.00 34.45 2.15
2948 3530 5.739752 TGTTTTGCCAATCTCGATGATAG 57.260 39.130 0.00 0.00 34.45 2.08
2950 3532 5.647658 TGTTTTGCCAATCTCGATGATAGTT 59.352 36.000 0.00 0.00 34.45 2.24
2952 3534 3.133691 TGCCAATCTCGATGATAGTTGC 58.866 45.455 0.00 0.00 34.45 4.17
2953 3535 2.481952 GCCAATCTCGATGATAGTTGCC 59.518 50.000 0.00 0.00 34.45 4.52
2955 3537 4.129380 CCAATCTCGATGATAGTTGCCAA 58.871 43.478 0.00 0.00 34.45 4.52
2959 3541 4.876125 TCTCGATGATAGTTGCCAATCTC 58.124 43.478 0.00 0.00 0.00 2.75
2960 3542 4.586421 TCTCGATGATAGTTGCCAATCTCT 59.414 41.667 0.00 0.00 0.00 3.10
2961 3543 4.625028 TCGATGATAGTTGCCAATCTCTG 58.375 43.478 0.00 0.00 0.00 3.35
2962 3544 4.100035 TCGATGATAGTTGCCAATCTCTGT 59.900 41.667 0.00 0.00 0.00 3.41
2963 3545 4.210746 CGATGATAGTTGCCAATCTCTGTG 59.789 45.833 0.00 0.00 0.00 3.66
2964 3546 4.824479 TGATAGTTGCCAATCTCTGTGA 57.176 40.909 0.00 0.00 0.00 3.58
2965 3547 5.164620 TGATAGTTGCCAATCTCTGTGAA 57.835 39.130 0.00 0.00 0.00 3.18
2966 3548 5.181009 TGATAGTTGCCAATCTCTGTGAAG 58.819 41.667 0.00 0.00 0.00 3.02
2967 3549 3.498774 AGTTGCCAATCTCTGTGAAGT 57.501 42.857 0.00 0.00 0.00 3.01
2968 3550 3.825328 AGTTGCCAATCTCTGTGAAGTT 58.175 40.909 0.00 0.00 0.00 2.66
2969 3551 4.210331 AGTTGCCAATCTCTGTGAAGTTT 58.790 39.130 0.00 0.00 0.00 2.66
2970 3552 4.037208 AGTTGCCAATCTCTGTGAAGTTTG 59.963 41.667 0.00 0.00 0.00 2.93
2971 3553 2.886523 TGCCAATCTCTGTGAAGTTTGG 59.113 45.455 8.66 8.66 44.05 3.28
2972 3554 3.149196 GCCAATCTCTGTGAAGTTTGGA 58.851 45.455 14.81 0.00 43.99 3.53
2973 3555 3.057946 GCCAATCTCTGTGAAGTTTGGAC 60.058 47.826 14.81 5.62 43.99 4.02
2974 3556 4.136796 CCAATCTCTGTGAAGTTTGGACA 58.863 43.478 7.63 0.00 43.99 4.02
2975 3557 4.763793 CCAATCTCTGTGAAGTTTGGACAT 59.236 41.667 7.63 0.00 43.99 3.06
2976 3558 5.242393 CCAATCTCTGTGAAGTTTGGACATT 59.758 40.000 7.63 0.00 43.99 2.71
2977 3559 6.376978 CAATCTCTGTGAAGTTTGGACATTC 58.623 40.000 0.00 0.00 0.00 2.67
2978 3560 4.389374 TCTCTGTGAAGTTTGGACATTCC 58.611 43.478 0.00 0.00 36.96 3.01
3060 3642 4.514441 CCTATGATCAATCTGTTGTCAGCC 59.486 45.833 0.00 0.00 41.10 4.85
3061 3643 3.421919 TGATCAATCTGTTGTCAGCCA 57.578 42.857 0.00 0.00 41.10 4.75
3073 3655 7.168219 TCTGTTGTCAGCCATCTACTAATTTT 58.832 34.615 0.00 0.00 41.10 1.82
3113 3695 5.356751 TCATACTTTGGTTATGACACCATGC 59.643 40.000 0.00 0.00 46.60 4.06
3174 3756 5.488341 TCTAATGGTTTTCACCTCTACTGC 58.512 41.667 0.00 0.00 44.61 4.40
3218 3800 2.208431 CTTGCAAAATGCCCGTTTTCA 58.792 42.857 0.00 0.00 44.23 2.69
3249 3831 3.097877 TCGCTTCAGGTATATGCTGTG 57.902 47.619 0.00 0.00 0.00 3.66
3296 3878 1.740025 CCATTTTTCCCTCTCTCGCAC 59.260 52.381 0.00 0.00 0.00 5.34
3434 4017 6.372981 CATTTTGCCCTCTTTTTGCATAAAC 58.627 36.000 0.00 0.00 34.51 2.01
3476 4059 2.032528 CAGCTGTCCCCGCAGAAA 59.967 61.111 5.25 0.00 38.70 2.52
3570 4153 7.603180 TGCACTTCTCATCAGGTAATAGTAT 57.397 36.000 0.00 0.00 0.00 2.12
3874 4457 2.636830 GACATGTGCATAGAGGTGCTT 58.363 47.619 1.15 0.00 45.27 3.91
3898 4481 3.201290 CTCAACACACCTCCATAGCATC 58.799 50.000 0.00 0.00 0.00 3.91
3910 4493 1.686587 CATAGCATCGGGACACCACTA 59.313 52.381 0.00 0.00 36.13 2.74
4046 4629 0.248743 CGCTATTTGCTGGGCATGTG 60.249 55.000 0.00 0.00 38.76 3.21
4071 4654 2.945668 GGGCTAGATACTTTTGGTGCTG 59.054 50.000 0.00 0.00 0.00 4.41
4072 4655 3.610911 GGCTAGATACTTTTGGTGCTGT 58.389 45.455 0.00 0.00 0.00 4.40
4073 4656 3.623510 GGCTAGATACTTTTGGTGCTGTC 59.376 47.826 0.00 0.00 0.00 3.51
4074 4657 3.623510 GCTAGATACTTTTGGTGCTGTCC 59.376 47.826 0.00 0.00 0.00 4.02
4075 4658 3.788227 AGATACTTTTGGTGCTGTCCA 57.212 42.857 0.00 0.00 35.49 4.02
4076 4659 3.679389 AGATACTTTTGGTGCTGTCCAG 58.321 45.455 0.00 0.00 38.80 3.86
4077 4660 2.270352 TACTTTTGGTGCTGTCCAGG 57.730 50.000 0.00 0.00 38.80 4.45
4078 4661 0.468029 ACTTTTGGTGCTGTCCAGGG 60.468 55.000 0.00 0.00 38.80 4.45
4079 4662 1.809567 CTTTTGGTGCTGTCCAGGGC 61.810 60.000 0.00 0.00 38.80 5.19
4080 4663 3.808218 TTTGGTGCTGTCCAGGGCC 62.808 63.158 0.00 0.00 38.80 5.80
4083 4666 3.702048 GTGCTGTCCAGGGCCGTA 61.702 66.667 0.00 0.00 0.00 4.02
4084 4667 3.702048 TGCTGTCCAGGGCCGTAC 61.702 66.667 0.00 0.00 0.00 3.67
4085 4668 4.468689 GCTGTCCAGGGCCGTACC 62.469 72.222 0.00 0.00 37.93 3.34
4094 4677 2.044352 GGCCGTACCCCAGCAATT 60.044 61.111 0.00 0.00 0.00 2.32
4095 4678 2.119029 GGCCGTACCCCAGCAATTC 61.119 63.158 0.00 0.00 0.00 2.17
4096 4679 2.469516 GCCGTACCCCAGCAATTCG 61.470 63.158 0.00 0.00 0.00 3.34
4097 4680 1.817941 CCGTACCCCAGCAATTCGG 60.818 63.158 0.00 0.00 0.00 4.30
4098 4681 1.817941 CGTACCCCAGCAATTCGGG 60.818 63.158 0.00 0.00 43.05 5.14
4103 4686 4.757355 CCAGCAATTCGGGGCCCA 62.757 66.667 26.86 2.47 0.00 5.36
4104 4687 3.142838 CAGCAATTCGGGGCCCAG 61.143 66.667 26.86 21.96 0.00 4.45
4105 4688 3.338250 AGCAATTCGGGGCCCAGA 61.338 61.111 26.86 24.38 0.00 3.86
4106 4689 2.830370 GCAATTCGGGGCCCAGAG 60.830 66.667 26.86 14.80 0.00 3.35
4107 4690 2.830370 CAATTCGGGGCCCAGAGC 60.830 66.667 26.86 4.59 42.60 4.09
4108 4691 4.489771 AATTCGGGGCCCAGAGCG 62.490 66.667 26.86 18.46 45.17 5.03
4113 4696 4.475135 GGGGCCCAGAGCGAAGTC 62.475 72.222 26.86 0.00 45.17 3.01
4114 4697 3.706373 GGGCCCAGAGCGAAGTCA 61.706 66.667 19.95 0.00 45.17 3.41
4115 4698 2.435059 GGCCCAGAGCGAAGTCAC 60.435 66.667 0.00 0.00 45.17 3.67
4116 4699 2.343758 GCCCAGAGCGAAGTCACA 59.656 61.111 0.00 0.00 0.00 3.58
4117 4700 1.301716 GCCCAGAGCGAAGTCACAA 60.302 57.895 0.00 0.00 0.00 3.33
4118 4701 0.674895 GCCCAGAGCGAAGTCACAAT 60.675 55.000 0.00 0.00 0.00 2.71
4119 4702 1.813513 CCCAGAGCGAAGTCACAATT 58.186 50.000 0.00 0.00 0.00 2.32
4120 4703 2.154462 CCCAGAGCGAAGTCACAATTT 58.846 47.619 0.00 0.00 0.00 1.82
4121 4704 3.334691 CCCAGAGCGAAGTCACAATTTA 58.665 45.455 0.00 0.00 0.00 1.40
4122 4705 3.372206 CCCAGAGCGAAGTCACAATTTAG 59.628 47.826 0.00 0.00 0.00 1.85
4123 4706 3.372206 CCAGAGCGAAGTCACAATTTAGG 59.628 47.826 0.00 0.00 0.00 2.69
4124 4707 4.245660 CAGAGCGAAGTCACAATTTAGGA 58.754 43.478 0.00 0.00 0.00 2.94
4125 4708 4.092091 CAGAGCGAAGTCACAATTTAGGAC 59.908 45.833 0.00 0.00 0.00 3.85
4126 4709 3.335579 AGCGAAGTCACAATTTAGGACC 58.664 45.455 0.00 0.00 31.99 4.46
4127 4710 2.418976 GCGAAGTCACAATTTAGGACCC 59.581 50.000 0.00 0.00 31.99 4.46
4128 4711 3.670625 CGAAGTCACAATTTAGGACCCA 58.329 45.455 0.00 0.00 31.99 4.51
4129 4712 4.261801 CGAAGTCACAATTTAGGACCCAT 58.738 43.478 0.00 0.00 31.99 4.00
4130 4713 4.094887 CGAAGTCACAATTTAGGACCCATG 59.905 45.833 0.00 0.00 31.99 3.66
4131 4714 4.657814 AGTCACAATTTAGGACCCATGT 57.342 40.909 0.00 0.00 31.99 3.21
4132 4715 5.772393 AGTCACAATTTAGGACCCATGTA 57.228 39.130 0.00 0.00 31.99 2.29
4133 4716 6.327386 AGTCACAATTTAGGACCCATGTAT 57.673 37.500 0.00 0.00 31.99 2.29
4134 4717 7.446106 AGTCACAATTTAGGACCCATGTATA 57.554 36.000 0.00 0.00 31.99 1.47
4135 4718 7.867921 AGTCACAATTTAGGACCCATGTATAA 58.132 34.615 0.00 0.00 31.99 0.98
4136 4719 7.993183 AGTCACAATTTAGGACCCATGTATAAG 59.007 37.037 0.00 0.00 31.99 1.73
4137 4720 7.990886 GTCACAATTTAGGACCCATGTATAAGA 59.009 37.037 0.00 0.00 0.00 2.10
4138 4721 8.553153 TCACAATTTAGGACCCATGTATAAGAA 58.447 33.333 0.00 0.00 0.00 2.52
4139 4722 9.354673 CACAATTTAGGACCCATGTATAAGAAT 57.645 33.333 0.00 0.00 0.00 2.40
4150 4733 9.686683 ACCCATGTATAAGAATATCAATTAGGC 57.313 33.333 0.00 0.00 0.00 3.93
4151 4734 9.125026 CCCATGTATAAGAATATCAATTAGGCC 57.875 37.037 0.00 0.00 0.00 5.19
4152 4735 9.685276 CCATGTATAAGAATATCAATTAGGCCA 57.315 33.333 5.01 0.00 0.00 5.36
4225 4808 9.130661 TCATACCAAAAGAAAATTCTCAGAACA 57.869 29.630 0.00 0.00 36.28 3.18
4226 4809 9.918630 CATACCAAAAGAAAATTCTCAGAACAT 57.081 29.630 0.00 0.00 36.28 2.71
4228 4811 8.652810 ACCAAAAGAAAATTCTCAGAACATTG 57.347 30.769 0.00 0.00 36.28 2.82
4229 4812 8.477256 ACCAAAAGAAAATTCTCAGAACATTGA 58.523 29.630 0.00 0.00 36.28 2.57
4230 4813 8.975439 CCAAAAGAAAATTCTCAGAACATTGAG 58.025 33.333 0.00 0.00 44.74 3.02
4231 4814 8.485591 CAAAAGAAAATTCTCAGAACATTGAGC 58.514 33.333 0.00 0.00 43.39 4.26
4232 4815 7.521871 AAGAAAATTCTCAGAACATTGAGCT 57.478 32.000 0.00 0.00 43.39 4.09
4233 4816 8.627208 AAGAAAATTCTCAGAACATTGAGCTA 57.373 30.769 0.00 0.00 43.39 3.32
4234 4817 8.038492 AGAAAATTCTCAGAACATTGAGCTAC 57.962 34.615 0.00 0.00 43.39 3.58
4235 4818 7.663081 AGAAAATTCTCAGAACATTGAGCTACA 59.337 33.333 0.00 0.00 43.39 2.74
4236 4819 7.750229 AAATTCTCAGAACATTGAGCTACAA 57.250 32.000 0.00 0.00 43.39 2.41
4237 4820 6.981762 ATTCTCAGAACATTGAGCTACAAG 57.018 37.500 0.00 0.00 43.39 3.16
4238 4821 5.474578 TCTCAGAACATTGAGCTACAAGT 57.525 39.130 0.00 0.00 43.39 3.16
4239 4822 5.473931 TCTCAGAACATTGAGCTACAAGTC 58.526 41.667 0.00 0.00 43.39 3.01
4240 4823 5.244851 TCTCAGAACATTGAGCTACAAGTCT 59.755 40.000 0.00 0.00 43.39 3.24
4241 4824 6.434340 TCTCAGAACATTGAGCTACAAGTCTA 59.566 38.462 0.00 0.00 43.39 2.59
4242 4825 7.123397 TCTCAGAACATTGAGCTACAAGTCTAT 59.877 37.037 0.00 0.00 43.39 1.98
4243 4826 7.261325 TCAGAACATTGAGCTACAAGTCTATC 58.739 38.462 0.00 0.00 42.02 2.08
4244 4827 6.198029 CAGAACATTGAGCTACAAGTCTATCG 59.802 42.308 0.00 0.00 42.02 2.92
4245 4828 4.363999 ACATTGAGCTACAAGTCTATCGC 58.636 43.478 0.00 0.00 42.02 4.58
4246 4829 4.142160 ACATTGAGCTACAAGTCTATCGCA 60.142 41.667 0.00 0.00 42.02 5.10
4247 4830 4.655762 TTGAGCTACAAGTCTATCGCAT 57.344 40.909 0.00 0.00 34.20 4.73
4248 4831 4.655762 TGAGCTACAAGTCTATCGCATT 57.344 40.909 0.00 0.00 0.00 3.56
4249 4832 5.011090 TGAGCTACAAGTCTATCGCATTT 57.989 39.130 0.00 0.00 0.00 2.32
4250 4833 6.144078 TGAGCTACAAGTCTATCGCATTTA 57.856 37.500 0.00 0.00 0.00 1.40
4251 4834 6.749139 TGAGCTACAAGTCTATCGCATTTAT 58.251 36.000 0.00 0.00 0.00 1.40
4252 4835 7.210174 TGAGCTACAAGTCTATCGCATTTATT 58.790 34.615 0.00 0.00 0.00 1.40
4253 4836 7.382488 TGAGCTACAAGTCTATCGCATTTATTC 59.618 37.037 0.00 0.00 0.00 1.75
4254 4837 7.437748 AGCTACAAGTCTATCGCATTTATTCT 58.562 34.615 0.00 0.00 0.00 2.40
4255 4838 7.596995 AGCTACAAGTCTATCGCATTTATTCTC 59.403 37.037 0.00 0.00 0.00 2.87
4256 4839 7.382488 GCTACAAGTCTATCGCATTTATTCTCA 59.618 37.037 0.00 0.00 0.00 3.27
4257 4840 9.249457 CTACAAGTCTATCGCATTTATTCTCAA 57.751 33.333 0.00 0.00 0.00 3.02
4258 4841 7.910304 ACAAGTCTATCGCATTTATTCTCAAC 58.090 34.615 0.00 0.00 0.00 3.18
4259 4842 7.549134 ACAAGTCTATCGCATTTATTCTCAACA 59.451 33.333 0.00 0.00 0.00 3.33
4260 4843 8.554528 CAAGTCTATCGCATTTATTCTCAACAT 58.445 33.333 0.00 0.00 0.00 2.71
4261 4844 9.764363 AAGTCTATCGCATTTATTCTCAACATA 57.236 29.630 0.00 0.00 0.00 2.29
4262 4845 9.764363 AGTCTATCGCATTTATTCTCAACATAA 57.236 29.630 0.00 0.00 0.00 1.90
4287 4870 6.647334 TGTTGTCAACATTACCATCAACAT 57.353 33.333 14.48 0.00 38.69 2.71
4288 4871 7.048629 TGTTGTCAACATTACCATCAACATT 57.951 32.000 14.48 0.00 38.69 2.71
4289 4872 8.171164 TGTTGTCAACATTACCATCAACATTA 57.829 30.769 14.48 0.00 38.69 1.90
4290 4873 8.296000 TGTTGTCAACATTACCATCAACATTAG 58.704 33.333 14.48 0.00 38.69 1.73
4291 4874 6.851609 TGTCAACATTACCATCAACATTAGC 58.148 36.000 0.00 0.00 0.00 3.09
4292 4875 6.432472 TGTCAACATTACCATCAACATTAGCA 59.568 34.615 0.00 0.00 0.00 3.49
4293 4876 7.122501 TGTCAACATTACCATCAACATTAGCAT 59.877 33.333 0.00 0.00 0.00 3.79
4294 4877 7.645340 GTCAACATTACCATCAACATTAGCATC 59.355 37.037 0.00 0.00 0.00 3.91
4295 4878 7.557358 TCAACATTACCATCAACATTAGCATCT 59.443 33.333 0.00 0.00 0.00 2.90
4296 4879 8.839343 CAACATTACCATCAACATTAGCATCTA 58.161 33.333 0.00 0.00 0.00 1.98
4297 4880 8.383318 ACATTACCATCAACATTAGCATCTAC 57.617 34.615 0.00 0.00 0.00 2.59
4298 4881 8.213679 ACATTACCATCAACATTAGCATCTACT 58.786 33.333 0.00 0.00 0.00 2.57
4299 4882 9.710900 CATTACCATCAACATTAGCATCTACTA 57.289 33.333 0.00 0.00 0.00 1.82
4303 4886 9.881649 ACCATCAACATTAGCATCTACTATATG 57.118 33.333 0.00 0.00 0.00 1.78
4316 4899 6.030548 TCTACTATATGAGATGTTGGCAGC 57.969 41.667 0.00 0.00 0.00 5.25
4317 4900 4.013267 ACTATATGAGATGTTGGCAGCC 57.987 45.455 3.66 3.66 0.00 4.85
4318 4901 3.649981 ACTATATGAGATGTTGGCAGCCT 59.350 43.478 14.15 0.00 0.00 4.58
4319 4902 3.589951 ATATGAGATGTTGGCAGCCTT 57.410 42.857 14.15 0.00 0.00 4.35
4320 4903 2.226962 ATGAGATGTTGGCAGCCTTT 57.773 45.000 14.15 0.00 0.00 3.11
4321 4904 1.999648 TGAGATGTTGGCAGCCTTTT 58.000 45.000 14.15 0.00 0.00 2.27
4322 4905 2.318908 TGAGATGTTGGCAGCCTTTTT 58.681 42.857 14.15 0.00 0.00 1.94
4347 4930 8.785329 TTTTTCCTCTTTGCAGTTTAATGTTT 57.215 26.923 0.00 0.00 0.00 2.83
4348 4931 8.419076 TTTTCCTCTTTGCAGTTTAATGTTTC 57.581 30.769 0.00 0.00 0.00 2.78
4349 4932 6.707440 TCCTCTTTGCAGTTTAATGTTTCA 57.293 33.333 0.00 0.00 0.00 2.69
4350 4933 6.738114 TCCTCTTTGCAGTTTAATGTTTCAG 58.262 36.000 0.00 0.00 0.00 3.02
4351 4934 6.321181 TCCTCTTTGCAGTTTAATGTTTCAGT 59.679 34.615 0.00 0.00 0.00 3.41
4352 4935 6.638468 CCTCTTTGCAGTTTAATGTTTCAGTC 59.362 38.462 0.00 0.00 0.00 3.51
4353 4936 7.333528 TCTTTGCAGTTTAATGTTTCAGTCT 57.666 32.000 0.00 0.00 0.00 3.24
4354 4937 7.771183 TCTTTGCAGTTTAATGTTTCAGTCTT 58.229 30.769 0.00 0.00 0.00 3.01
4355 4938 8.250332 TCTTTGCAGTTTAATGTTTCAGTCTTT 58.750 29.630 0.00 0.00 0.00 2.52
4356 4939 9.515020 CTTTGCAGTTTAATGTTTCAGTCTTTA 57.485 29.630 0.00 0.00 0.00 1.85
4357 4940 9.862371 TTTGCAGTTTAATGTTTCAGTCTTTAA 57.138 25.926 0.00 0.00 0.00 1.52
4359 4942 9.677567 TGCAGTTTAATGTTTCAGTCTTTAATC 57.322 29.630 0.00 0.00 0.00 1.75
4360 4943 9.129209 GCAGTTTAATGTTTCAGTCTTTAATCC 57.871 33.333 0.00 0.00 0.00 3.01
4361 4944 9.626045 CAGTTTAATGTTTCAGTCTTTAATCCC 57.374 33.333 0.00 0.00 0.00 3.85
4362 4945 8.803235 AGTTTAATGTTTCAGTCTTTAATCCCC 58.197 33.333 0.00 0.00 0.00 4.81
4363 4946 8.803235 GTTTAATGTTTCAGTCTTTAATCCCCT 58.197 33.333 0.00 0.00 0.00 4.79
4364 4947 6.840780 AATGTTTCAGTCTTTAATCCCCTG 57.159 37.500 0.00 0.00 0.00 4.45
4365 4948 5.576563 TGTTTCAGTCTTTAATCCCCTGA 57.423 39.130 0.00 0.00 0.00 3.86
4366 4949 6.139679 TGTTTCAGTCTTTAATCCCCTGAT 57.860 37.500 0.00 0.00 32.63 2.90
4367 4950 6.552008 TGTTTCAGTCTTTAATCCCCTGATT 58.448 36.000 0.00 0.00 43.56 2.57
4368 4951 7.010160 TGTTTCAGTCTTTAATCCCCTGATTT 58.990 34.615 0.00 0.00 41.44 2.17
4369 4952 7.176690 TGTTTCAGTCTTTAATCCCCTGATTTC 59.823 37.037 0.00 0.00 41.44 2.17
4370 4953 5.755849 TCAGTCTTTAATCCCCTGATTTCC 58.244 41.667 0.00 0.00 41.44 3.13
4371 4954 5.492524 TCAGTCTTTAATCCCCTGATTTCCT 59.507 40.000 0.00 0.00 41.44 3.36
4372 4955 6.011628 TCAGTCTTTAATCCCCTGATTTCCTT 60.012 38.462 0.00 0.00 41.44 3.36
4373 4956 7.183839 TCAGTCTTTAATCCCCTGATTTCCTTA 59.816 37.037 0.00 0.00 41.44 2.69
4374 4957 7.500559 CAGTCTTTAATCCCCTGATTTCCTTAG 59.499 40.741 0.00 0.00 41.44 2.18
4375 4958 6.773200 GTCTTTAATCCCCTGATTTCCTTAGG 59.227 42.308 0.00 0.00 41.44 2.69
4376 4959 3.602205 AATCCCCTGATTTCCTTAGGC 57.398 47.619 0.00 0.00 38.00 3.93
4377 4960 2.286935 TCCCCTGATTTCCTTAGGCT 57.713 50.000 0.00 0.00 0.00 4.58
4378 4961 3.431411 TCCCCTGATTTCCTTAGGCTA 57.569 47.619 0.00 0.00 0.00 3.93
4379 4962 3.954662 TCCCCTGATTTCCTTAGGCTAT 58.045 45.455 0.00 0.00 0.00 2.97
4380 4963 5.101254 TCCCCTGATTTCCTTAGGCTATA 57.899 43.478 0.00 0.00 0.00 1.31
4381 4964 5.482580 TCCCCTGATTTCCTTAGGCTATAA 58.517 41.667 0.00 0.00 0.00 0.98
4382 4965 6.098446 TCCCCTGATTTCCTTAGGCTATAAT 58.902 40.000 0.00 0.00 0.00 1.28
4383 4966 6.215636 TCCCCTGATTTCCTTAGGCTATAATC 59.784 42.308 0.00 4.05 0.00 1.75
4384 4967 6.109359 CCCTGATTTCCTTAGGCTATAATCG 58.891 44.000 0.00 1.29 0.00 3.34
4385 4968 5.582665 CCTGATTTCCTTAGGCTATAATCGC 59.417 44.000 0.00 0.00 0.00 4.58
4394 4977 3.601443 GGCTATAATCGCCTGATGAGT 57.399 47.619 0.00 0.00 44.17 3.41
4395 4978 4.720649 GGCTATAATCGCCTGATGAGTA 57.279 45.455 0.00 0.00 44.17 2.59
4396 4979 4.425520 GGCTATAATCGCCTGATGAGTAC 58.574 47.826 0.00 0.00 44.17 2.73
4397 4980 4.158764 GGCTATAATCGCCTGATGAGTACT 59.841 45.833 0.00 0.00 44.17 2.73
4398 4981 5.098893 GCTATAATCGCCTGATGAGTACTG 58.901 45.833 0.00 0.00 34.24 2.74
4399 4982 5.106118 GCTATAATCGCCTGATGAGTACTGA 60.106 44.000 0.00 0.00 34.24 3.41
4400 4983 5.991933 ATAATCGCCTGATGAGTACTGAT 57.008 39.130 0.00 0.00 34.24 2.90
4401 4984 7.201741 GCTATAATCGCCTGATGAGTACTGATA 60.202 40.741 0.00 0.00 34.24 2.15
4402 4985 5.991933 AATCGCCTGATGAGTACTGATAT 57.008 39.130 0.00 0.00 34.24 1.63
4403 4986 8.753497 ATAATCGCCTGATGAGTACTGATATA 57.247 34.615 0.00 0.00 34.24 0.86
4404 4987 7.652524 AATCGCCTGATGAGTACTGATATAT 57.347 36.000 0.00 0.00 34.24 0.86
4405 4988 6.442513 TCGCCTGATGAGTACTGATATATG 57.557 41.667 0.00 0.00 0.00 1.78
4406 4989 5.039984 CGCCTGATGAGTACTGATATATGC 58.960 45.833 0.00 0.00 0.00 3.14
4407 4990 5.393461 CGCCTGATGAGTACTGATATATGCA 60.393 44.000 0.00 0.00 0.00 3.96
4408 4991 6.041511 GCCTGATGAGTACTGATATATGCAG 58.958 44.000 0.00 0.34 39.26 4.41
4410 4993 7.148000 GCCTGATGAGTACTGATATATGCAGTA 60.148 40.741 0.00 15.35 44.27 2.74
4427 5010 6.767524 TGCAGTACTTATACAAAATTGGGG 57.232 37.500 0.00 0.00 33.30 4.96
4428 5011 5.654650 TGCAGTACTTATACAAAATTGGGGG 59.345 40.000 0.00 0.00 33.30 5.40
4429 5012 5.451381 GCAGTACTTATACAAAATTGGGGGC 60.451 44.000 0.00 0.00 33.30 5.80
4430 5013 5.068591 CAGTACTTATACAAAATTGGGGGCC 59.931 44.000 0.00 0.00 33.30 5.80
4431 5014 3.380393 ACTTATACAAAATTGGGGGCCC 58.620 45.455 15.76 15.76 0.00 5.80
4432 5015 2.480642 TATACAAAATTGGGGGCCCC 57.519 50.000 36.02 36.02 45.71 5.80
4441 5024 3.726004 GGGGGCCCCAGATTTTTG 58.274 61.111 41.80 0.00 44.65 2.44
4442 5025 1.995066 GGGGGCCCCAGATTTTTGG 60.995 63.158 41.80 0.00 44.65 3.28
4448 5031 3.726004 CCAGATTTTTGGGGGCCC 58.274 61.111 15.76 15.76 34.46 5.80
4449 5032 1.080907 CCAGATTTTTGGGGGCCCT 59.919 57.895 24.38 0.00 36.94 5.19
4450 5033 1.266867 CCAGATTTTTGGGGGCCCTG 61.267 60.000 24.38 10.03 36.94 4.45
4451 5034 0.545071 CAGATTTTTGGGGGCCCTGT 60.545 55.000 24.38 0.00 36.94 4.00
4452 5035 0.545071 AGATTTTTGGGGGCCCTGTG 60.545 55.000 24.38 0.00 36.94 3.66
4453 5036 2.184020 GATTTTTGGGGGCCCTGTGC 62.184 60.000 24.38 5.99 40.16 4.57
4454 5037 2.979990 ATTTTTGGGGGCCCTGTGCA 62.980 55.000 24.38 9.12 43.89 4.57
4455 5038 4.619320 TTTGGGGGCCCTGTGCAG 62.619 66.667 24.38 0.00 43.89 4.41
4473 5056 4.170062 CGGCTCCGCTTGCACATG 62.170 66.667 0.00 0.00 0.00 3.21
4474 5057 3.058160 GGCTCCGCTTGCACATGT 61.058 61.111 0.00 0.00 0.00 3.21
4475 5058 2.177531 GCTCCGCTTGCACATGTG 59.822 61.111 21.83 21.83 0.00 3.21
4487 5070 3.110139 CATGTGCATGTACGGGCC 58.890 61.111 9.48 0.00 34.23 5.80
4488 5071 1.451927 CATGTGCATGTACGGGCCT 60.452 57.895 9.48 0.00 34.23 5.19
4489 5072 1.451927 ATGTGCATGTACGGGCCTG 60.452 57.895 11.02 11.02 0.00 4.85
4490 5073 2.824041 GTGCATGTACGGGCCTGG 60.824 66.667 18.00 4.46 0.00 4.45
4491 5074 3.326578 TGCATGTACGGGCCTGGT 61.327 61.111 18.00 10.93 0.00 4.00
4492 5075 2.824041 GCATGTACGGGCCTGGTG 60.824 66.667 18.00 10.11 0.00 4.17
4493 5076 2.824041 CATGTACGGGCCTGGTGC 60.824 66.667 18.00 12.28 40.16 5.01
4494 5077 3.009115 ATGTACGGGCCTGGTGCT 61.009 61.111 18.00 0.00 40.92 4.40
4540 5125 3.440415 TCGATGGCGAGCGAGTGT 61.440 61.111 4.55 0.00 42.51 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 7.124573 TGTCTACATGGCTTGTACTATGATT 57.875 36.000 8.98 0.00 39.87 2.57
36 37 9.424319 GTTTTGTCAGAGAATAAGATGTCTACA 57.576 33.333 0.00 0.00 0.00 2.74
114 117 7.312899 CCACAGGTTGGTTTTATGTATTTCTC 58.687 38.462 0.00 0.00 41.10 2.87
143 146 3.054361 GGTGGGTTGGAGATATCACTGTT 60.054 47.826 5.32 0.00 0.00 3.16
168 183 2.957402 TGAGCACCCTGATTTGAACT 57.043 45.000 0.00 0.00 0.00 3.01
277 403 4.092237 CCGCGTTGTATGTCACTTGATAAA 59.908 41.667 4.92 0.00 0.00 1.40
388 514 3.245336 GGGTCCCACCACCTTTACATAAA 60.245 47.826 1.78 0.00 41.02 1.40
389 515 2.309458 GGGTCCCACCACCTTTACATAA 59.691 50.000 1.78 0.00 41.02 1.90
390 516 1.917568 GGGTCCCACCACCTTTACATA 59.082 52.381 1.78 0.00 41.02 2.29
393 519 2.156920 TGGGTCCCACCACCTTTAC 58.843 57.895 6.47 0.00 41.02 2.01
475 603 6.659242 CCAAACAGACCCAACTTATAAGTCAT 59.341 38.462 18.28 1.19 38.57 3.06
488 616 6.263617 GTGACTTATTTTACCAAACAGACCCA 59.736 38.462 0.00 0.00 0.00 4.51
519 647 8.539674 CAAATAAGTCACCAACTTTAAAAGTGC 58.460 33.333 0.00 0.00 46.26 4.40
527 655 7.176589 TGGTTTCAAATAAGTCACCAACTTT 57.823 32.000 0.00 0.00 46.26 2.66
657 794 6.782988 TGGGTTCCATCACCTTTACATAAAAA 59.217 34.615 0.00 0.00 36.97 1.94
658 795 6.209788 GTGGGTTCCATCACCTTTACATAAAA 59.790 38.462 0.00 0.00 35.28 1.52
659 796 5.712917 GTGGGTTCCATCACCTTTACATAAA 59.287 40.000 0.00 0.00 35.28 1.40
660 797 5.258051 GTGGGTTCCATCACCTTTACATAA 58.742 41.667 0.00 0.00 35.28 1.90
661 798 4.624364 CGTGGGTTCCATCACCTTTACATA 60.624 45.833 0.00 0.00 35.28 2.29
662 799 3.697166 GTGGGTTCCATCACCTTTACAT 58.303 45.455 0.00 0.00 35.28 2.29
663 800 2.551287 CGTGGGTTCCATCACCTTTACA 60.551 50.000 0.00 0.00 35.28 2.41
664 801 2.081462 CGTGGGTTCCATCACCTTTAC 58.919 52.381 0.00 0.00 35.28 2.01
666 803 0.893727 GCGTGGGTTCCATCACCTTT 60.894 55.000 0.00 0.00 35.28 3.11
667 804 1.303317 GCGTGGGTTCCATCACCTT 60.303 57.895 0.00 0.00 35.28 3.50
673 810 0.178975 TCCTTTTGCGTGGGTTCCAT 60.179 50.000 0.00 0.00 35.28 3.41
677 814 1.106944 CACCTCCTTTTGCGTGGGTT 61.107 55.000 0.00 0.00 0.00 4.11
692 829 9.503399 CCTCAACTTAAAACTTATAAGTCACCT 57.497 33.333 18.28 0.05 41.49 4.00
716 853 5.700402 ATAAGTCATAAGTTGCCTCACCT 57.300 39.130 0.00 0.00 0.00 4.00
747 884 6.094048 CCAAACAGACCCAACTTATATGTCAG 59.906 42.308 0.00 0.00 0.00 3.51
752 889 4.929479 TGCCAAACAGACCCAACTTATAT 58.071 39.130 0.00 0.00 0.00 0.86
756 893 1.859302 TTGCCAAACAGACCCAACTT 58.141 45.000 0.00 0.00 0.00 2.66
760 897 5.559148 AAATATTTTGCCAAACAGACCCA 57.441 34.783 0.00 0.00 0.00 4.51
845 1207 6.248631 GCACCTCATAATTTCGAGTTTGTAC 58.751 40.000 3.85 0.00 0.00 2.90
849 1211 4.250464 TCGCACCTCATAATTTCGAGTTT 58.750 39.130 3.85 0.00 0.00 2.66
865 1227 0.657368 CGTCAAACTTGCTTCGCACC 60.657 55.000 0.00 0.00 38.71 5.01
867 1229 1.092921 ACCGTCAAACTTGCTTCGCA 61.093 50.000 0.00 0.00 36.47 5.10
1055 1506 3.203487 GTGGGACTTGGGGATTATGGTTA 59.797 47.826 0.00 0.00 0.00 2.85
1177 1628 3.003763 GGAGAGGGCCGGTGAACT 61.004 66.667 1.90 0.00 0.00 3.01
1180 1631 4.779733 GGAGGAGAGGGCCGGTGA 62.780 72.222 1.90 0.00 0.00 4.02
1311 1762 3.692576 ATCGGAGATAACGAAAGTCACG 58.307 45.455 0.00 0.00 44.53 4.35
1377 1828 0.393537 CAGTGATGAAGGGGCTGGTC 60.394 60.000 0.00 0.00 0.00 4.02
1395 1846 0.036732 AGCAAACGATCTTGGGCTCA 59.963 50.000 0.00 0.00 0.00 4.26
1428 1879 1.548357 GGTGGAAGCTGAGGAGAGCA 61.548 60.000 0.00 0.00 41.83 4.26
1773 2230 0.244721 GATCAACAAAGCCCAGCACC 59.755 55.000 0.00 0.00 0.00 5.01
1788 2245 5.779241 ACAAAATACCCTTCCAGAGATCA 57.221 39.130 0.00 0.00 0.00 2.92
1995 2453 1.134280 AGATCCTTGGTTGAGGCATCG 60.134 52.381 0.00 0.00 36.71 3.84
2064 2523 0.673985 GCCTCCAACCAACAAACTCC 59.326 55.000 0.00 0.00 0.00 3.85
2377 2841 5.930569 GGAATGTAGGTGGGATTACGATTAC 59.069 44.000 0.00 0.00 0.00 1.89
2378 2842 5.842328 AGGAATGTAGGTGGGATTACGATTA 59.158 40.000 0.00 0.00 0.00 1.75
2379 2843 4.658901 AGGAATGTAGGTGGGATTACGATT 59.341 41.667 0.00 0.00 0.00 3.34
2380 2844 4.232091 AGGAATGTAGGTGGGATTACGAT 58.768 43.478 0.00 0.00 0.00 3.73
2381 2845 3.649843 AGGAATGTAGGTGGGATTACGA 58.350 45.455 0.00 0.00 0.00 3.43
2382 2846 4.127171 CAAGGAATGTAGGTGGGATTACG 58.873 47.826 0.00 0.00 0.00 3.18
2492 3067 8.349983 ACACACAAATAGTCCTAAAAATGACAC 58.650 33.333 0.00 0.00 33.89 3.67
2676 3258 9.950496 ATGTCAGTACAAAGAAAGTCTATCATT 57.050 29.630 0.00 0.00 39.58 2.57
2771 3353 4.455190 GGCAAGCTAAATTTTGGCATCAAA 59.545 37.500 18.13 0.00 45.84 2.69
2810 3392 8.903820 GGGAGTAATTGATAGCAAATACTTTGT 58.096 33.333 19.52 1.32 45.85 2.83
2830 3412 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
2831 3413 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
2832 3414 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
2833 3415 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
2834 3416 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
2835 3417 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
2836 3418 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
2837 3419 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
2838 3420 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
2839 3421 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
2840 3422 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
2841 3423 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
2842 3424 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
2843 3425 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
2846 3428 9.865321 ACTAGTGTCAAAAACGCTCTTATATTA 57.135 29.630 0.00 0.00 45.69 0.98
2847 3429 8.656849 CACTAGTGTCAAAAACGCTCTTATATT 58.343 33.333 15.06 0.00 45.69 1.28
2848 3430 7.817962 ACACTAGTGTCAAAAACGCTCTTATAT 59.182 33.333 22.95 0.00 45.69 0.86
2849 3431 7.149973 ACACTAGTGTCAAAAACGCTCTTATA 58.850 34.615 22.95 0.00 45.69 0.98
2850 3432 5.989777 ACACTAGTGTCAAAAACGCTCTTAT 59.010 36.000 22.95 0.00 45.69 1.73
2851 3433 5.353938 ACACTAGTGTCAAAAACGCTCTTA 58.646 37.500 22.95 0.00 45.69 2.10
2852 3434 4.189231 ACACTAGTGTCAAAAACGCTCTT 58.811 39.130 22.95 0.00 45.69 2.85
2853 3435 3.793559 ACACTAGTGTCAAAAACGCTCT 58.206 40.909 22.95 0.00 45.69 4.09
2854 3436 4.743644 ACTACACTAGTGTCAAAAACGCTC 59.256 41.667 31.11 0.00 45.69 5.03
2867 3449 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
2868 3450 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
2869 3451 8.876275 ATAAGAACGTTTTTGACACTACACTA 57.124 30.769 13.87 0.00 0.00 2.74
2870 3452 7.781548 ATAAGAACGTTTTTGACACTACACT 57.218 32.000 13.87 0.00 0.00 3.55
2876 3458 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
2877 3459 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
2878 3460 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
2879 3461 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
2880 3462 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
2881 3463 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
2882 3464 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
2883 3465 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
2884 3466 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
2885 3467 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
2886 3468 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
2887 3469 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
2888 3470 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
2889 3471 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2890 3472 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2891 3473 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2892 3474 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2893 3475 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2894 3476 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
2895 3477 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
2896 3478 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2897 3479 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2898 3480 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
2899 3481 0.613853 CAACTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
2900 3482 0.614134 ACAACTACTCCCTCCGTCCC 60.614 60.000 0.00 0.00 0.00 4.46
2901 3483 0.816373 GACAACTACTCCCTCCGTCC 59.184 60.000 0.00 0.00 0.00 4.79
2902 3484 1.836802 AGACAACTACTCCCTCCGTC 58.163 55.000 0.00 0.00 0.00 4.79
2903 3485 2.620108 GGTAGACAACTACTCCCTCCGT 60.620 54.545 0.00 0.00 45.70 4.69
2904 3486 2.022934 GGTAGACAACTACTCCCTCCG 58.977 57.143 0.00 0.00 45.70 4.63
2905 3487 3.385314 AGGTAGACAACTACTCCCTCC 57.615 52.381 0.00 0.00 45.70 4.30
2906 3488 4.087907 ACAAGGTAGACAACTACTCCCTC 58.912 47.826 0.00 0.00 45.70 4.30
2907 3489 4.129317 ACAAGGTAGACAACTACTCCCT 57.871 45.455 0.00 0.00 45.70 4.20
2908 3490 4.886496 AACAAGGTAGACAACTACTCCC 57.114 45.455 0.00 0.00 45.70 4.30
2909 3491 5.049612 GCAAAACAAGGTAGACAACTACTCC 60.050 44.000 0.00 0.00 45.70 3.85
2910 3492 5.049612 GGCAAAACAAGGTAGACAACTACTC 60.050 44.000 0.00 0.00 45.70 2.59
2911 3493 4.820173 GGCAAAACAAGGTAGACAACTACT 59.180 41.667 0.00 0.00 45.70 2.57
2912 3494 4.577283 TGGCAAAACAAGGTAGACAACTAC 59.423 41.667 0.00 0.00 45.70 2.73
2946 3528 4.623932 ACTTCACAGAGATTGGCAACTA 57.376 40.909 0.00 0.00 37.61 2.24
2947 3529 3.498774 ACTTCACAGAGATTGGCAACT 57.501 42.857 0.00 1.63 37.61 3.16
2948 3530 4.293415 CAAACTTCACAGAGATTGGCAAC 58.707 43.478 0.00 0.00 0.00 4.17
2950 3532 2.886523 CCAAACTTCACAGAGATTGGCA 59.113 45.455 1.76 0.00 31.86 4.92
2952 3534 4.136796 TGTCCAAACTTCACAGAGATTGG 58.863 43.478 7.39 7.39 38.88 3.16
2953 3535 5.954296 ATGTCCAAACTTCACAGAGATTG 57.046 39.130 0.00 0.00 0.00 2.67
2955 3537 5.006386 GGAATGTCCAAACTTCACAGAGAT 58.994 41.667 0.00 0.00 36.28 2.75
2959 3541 3.221771 TGGGAATGTCCAAACTTCACAG 58.778 45.455 0.00 0.00 38.64 3.66
2960 3542 3.304911 TGGGAATGTCCAAACTTCACA 57.695 42.857 0.00 0.00 38.64 3.58
3060 3642 6.375455 ACAACTCAGGGCAAAATTAGTAGATG 59.625 38.462 0.00 0.00 0.00 2.90
3061 3643 6.375455 CACAACTCAGGGCAAAATTAGTAGAT 59.625 38.462 0.00 0.00 0.00 1.98
3073 3655 0.478072 ATGAACCACAACTCAGGGCA 59.522 50.000 0.00 0.00 0.00 5.36
3174 3756 3.932545 ACCTGAGCTAGATCTAATGCG 57.067 47.619 9.79 0.00 0.00 4.73
3218 3800 3.157087 ACCTGAAGCGAAAAATGTCCAT 58.843 40.909 0.00 0.00 0.00 3.41
3283 3865 2.666317 TCATATTGTGCGAGAGAGGGA 58.334 47.619 0.00 0.00 0.00 4.20
3448 4031 2.353704 GGGGACAGCTGCAAAATAAACC 60.354 50.000 15.27 2.82 0.00 3.27
3484 4067 5.611374 TCTGTTGGTAAGCATTAGGATAGC 58.389 41.667 0.00 0.00 0.00 2.97
3486 4069 6.055588 GCTTCTGTTGGTAAGCATTAGGATA 58.944 40.000 0.00 0.00 45.89 2.59
3570 4153 2.905415 ATCCCCAGCTTGACAAATGA 57.095 45.000 2.38 0.00 0.00 2.57
3705 4288 3.452755 TTCAGTGAGGTGTGTAGTGTG 57.547 47.619 0.00 0.00 0.00 3.82
3736 4319 2.233271 CCTACCGATAGCCCTTAACGA 58.767 52.381 0.00 0.00 29.89 3.85
3874 4457 2.028112 GCTATGGAGGTGTGTTGAGTGA 60.028 50.000 0.00 0.00 0.00 3.41
3898 4481 1.330655 ATCTGGCTAGTGGTGTCCCG 61.331 60.000 0.00 0.00 0.00 5.14
4046 4629 4.998033 GCACCAAAAGTATCTAGCCCTATC 59.002 45.833 0.00 0.00 0.00 2.08
4079 4662 1.817941 CCGAATTGCTGGGGTACGG 60.818 63.158 0.00 0.00 0.00 4.02
4080 4663 1.817941 CCCGAATTGCTGGGGTACG 60.818 63.158 0.00 0.00 42.05 3.67
4081 4664 4.235731 CCCGAATTGCTGGGGTAC 57.764 61.111 0.00 0.00 42.05 3.34
4086 4669 4.757355 TGGGCCCCGAATTGCTGG 62.757 66.667 22.27 0.00 0.00 4.85
4087 4670 3.142838 CTGGGCCCCGAATTGCTG 61.143 66.667 22.27 0.00 0.00 4.41
4088 4671 3.338250 TCTGGGCCCCGAATTGCT 61.338 61.111 22.27 0.00 0.00 3.91
4089 4672 2.830370 CTCTGGGCCCCGAATTGC 60.830 66.667 22.27 0.00 0.00 3.56
4090 4673 2.830370 GCTCTGGGCCCCGAATTG 60.830 66.667 22.27 8.03 34.27 2.32
4091 4674 4.489771 CGCTCTGGGCCCCGAATT 62.490 66.667 22.27 0.00 37.74 2.17
4096 4679 4.475135 GACTTCGCTCTGGGCCCC 62.475 72.222 22.27 1.60 37.74 5.80
4097 4680 3.706373 TGACTTCGCTCTGGGCCC 61.706 66.667 17.59 17.59 37.74 5.80
4098 4681 2.435059 GTGACTTCGCTCTGGGCC 60.435 66.667 0.00 0.00 37.74 5.80
4099 4682 0.674895 ATTGTGACTTCGCTCTGGGC 60.675 55.000 0.00 0.00 37.64 5.36
4100 4683 1.813513 AATTGTGACTTCGCTCTGGG 58.186 50.000 0.00 0.00 0.00 4.45
4101 4684 3.372206 CCTAAATTGTGACTTCGCTCTGG 59.628 47.826 0.00 0.00 0.00 3.86
4102 4685 4.092091 GTCCTAAATTGTGACTTCGCTCTG 59.908 45.833 0.00 0.00 0.00 3.35
4103 4686 4.246458 GTCCTAAATTGTGACTTCGCTCT 58.754 43.478 0.00 0.00 0.00 4.09
4104 4687 3.371285 GGTCCTAAATTGTGACTTCGCTC 59.629 47.826 0.00 0.00 0.00 5.03
4105 4688 3.335579 GGTCCTAAATTGTGACTTCGCT 58.664 45.455 0.00 0.00 0.00 4.93
4106 4689 2.418976 GGGTCCTAAATTGTGACTTCGC 59.581 50.000 0.00 0.00 0.00 4.70
4107 4690 3.670625 TGGGTCCTAAATTGTGACTTCG 58.329 45.455 0.00 0.00 0.00 3.79
4108 4691 5.010282 ACATGGGTCCTAAATTGTGACTTC 58.990 41.667 0.00 0.00 0.00 3.01
4109 4692 4.998051 ACATGGGTCCTAAATTGTGACTT 58.002 39.130 0.00 0.00 0.00 3.01
4110 4693 4.657814 ACATGGGTCCTAAATTGTGACT 57.342 40.909 0.00 0.00 0.00 3.41
4111 4694 7.990886 TCTTATACATGGGTCCTAAATTGTGAC 59.009 37.037 0.00 0.00 0.00 3.67
4112 4695 8.096621 TCTTATACATGGGTCCTAAATTGTGA 57.903 34.615 0.00 0.00 0.00 3.58
4113 4696 8.746052 TTCTTATACATGGGTCCTAAATTGTG 57.254 34.615 0.00 0.00 0.00 3.33
4124 4707 9.686683 GCCTAATTGATATTCTTATACATGGGT 57.313 33.333 0.00 0.00 0.00 4.51
4125 4708 9.125026 GGCCTAATTGATATTCTTATACATGGG 57.875 37.037 0.00 0.00 0.00 4.00
4126 4709 9.685276 TGGCCTAATTGATATTCTTATACATGG 57.315 33.333 3.32 0.00 0.00 3.66
4199 4782 9.130661 TGTTCTGAGAATTTTCTTTTGGTATGA 57.869 29.630 0.00 0.00 37.73 2.15
4200 4783 9.918630 ATGTTCTGAGAATTTTCTTTTGGTATG 57.081 29.630 0.00 0.00 37.73 2.39
4202 4785 9.748708 CAATGTTCTGAGAATTTTCTTTTGGTA 57.251 29.630 0.00 0.00 37.73 3.25
4203 4786 8.477256 TCAATGTTCTGAGAATTTTCTTTTGGT 58.523 29.630 0.00 0.00 37.73 3.67
4204 4787 8.876275 TCAATGTTCTGAGAATTTTCTTTTGG 57.124 30.769 0.00 0.00 37.73 3.28
4205 4788 8.485591 GCTCAATGTTCTGAGAATTTTCTTTTG 58.514 33.333 0.00 0.00 44.82 2.44
4206 4789 8.419442 AGCTCAATGTTCTGAGAATTTTCTTTT 58.581 29.630 0.00 0.00 44.82 2.27
4207 4790 7.949434 AGCTCAATGTTCTGAGAATTTTCTTT 58.051 30.769 0.00 0.00 44.82 2.52
4208 4791 7.521871 AGCTCAATGTTCTGAGAATTTTCTT 57.478 32.000 0.00 0.00 44.82 2.52
4209 4792 7.663081 TGTAGCTCAATGTTCTGAGAATTTTCT 59.337 33.333 0.00 0.00 44.82 2.52
4210 4793 7.810658 TGTAGCTCAATGTTCTGAGAATTTTC 58.189 34.615 0.00 0.00 44.82 2.29
4211 4794 7.750229 TGTAGCTCAATGTTCTGAGAATTTT 57.250 32.000 0.00 0.00 44.82 1.82
4212 4795 7.446625 ACTTGTAGCTCAATGTTCTGAGAATTT 59.553 33.333 0.00 0.00 44.82 1.82
4213 4796 6.939163 ACTTGTAGCTCAATGTTCTGAGAATT 59.061 34.615 0.00 0.00 44.82 2.17
4214 4797 6.471146 ACTTGTAGCTCAATGTTCTGAGAAT 58.529 36.000 0.00 0.00 44.82 2.40
4215 4798 5.858381 ACTTGTAGCTCAATGTTCTGAGAA 58.142 37.500 4.81 0.00 44.82 2.87
4216 4799 5.244851 AGACTTGTAGCTCAATGTTCTGAGA 59.755 40.000 4.81 0.00 44.82 3.27
4217 4800 5.477510 AGACTTGTAGCTCAATGTTCTGAG 58.522 41.667 0.00 0.00 44.82 3.35
4218 4801 5.474578 AGACTTGTAGCTCAATGTTCTGA 57.525 39.130 0.00 0.00 35.35 3.27
4219 4802 6.198029 CGATAGACTTGTAGCTCAATGTTCTG 59.802 42.308 0.00 0.00 34.71 3.02
4220 4803 6.269315 CGATAGACTTGTAGCTCAATGTTCT 58.731 40.000 0.00 0.64 34.71 3.01
4221 4804 5.051374 GCGATAGACTTGTAGCTCAATGTTC 60.051 44.000 0.00 0.00 34.71 3.18
4222 4805 4.806247 GCGATAGACTTGTAGCTCAATGTT 59.194 41.667 0.00 0.00 34.71 2.71
4223 4806 4.142160 TGCGATAGACTTGTAGCTCAATGT 60.142 41.667 0.00 0.00 34.71 2.71
4224 4807 4.363138 TGCGATAGACTTGTAGCTCAATG 58.637 43.478 0.00 0.00 34.71 2.82
4225 4808 4.655762 TGCGATAGACTTGTAGCTCAAT 57.344 40.909 0.00 0.00 34.71 2.57
4226 4809 4.655762 ATGCGATAGACTTGTAGCTCAA 57.344 40.909 0.00 0.00 39.76 3.02
4227 4810 4.655762 AATGCGATAGACTTGTAGCTCA 57.344 40.909 0.00 0.00 39.76 4.26
4228 4811 7.596995 AGAATAAATGCGATAGACTTGTAGCTC 59.403 37.037 0.00 0.00 39.76 4.09
4229 4812 7.437748 AGAATAAATGCGATAGACTTGTAGCT 58.562 34.615 0.00 0.00 39.76 3.32
4230 4813 7.382488 TGAGAATAAATGCGATAGACTTGTAGC 59.618 37.037 0.00 0.00 39.76 3.58
4231 4814 8.803201 TGAGAATAAATGCGATAGACTTGTAG 57.197 34.615 0.00 0.00 39.76 2.74
4232 4815 9.031360 GTTGAGAATAAATGCGATAGACTTGTA 57.969 33.333 0.00 0.00 39.76 2.41
4233 4816 7.549134 TGTTGAGAATAAATGCGATAGACTTGT 59.451 33.333 0.00 0.00 39.76 3.16
4234 4817 7.909267 TGTTGAGAATAAATGCGATAGACTTG 58.091 34.615 0.00 0.00 39.76 3.16
4235 4818 8.668510 ATGTTGAGAATAAATGCGATAGACTT 57.331 30.769 0.00 0.00 39.76 3.01
4236 4819 9.764363 TTATGTTGAGAATAAATGCGATAGACT 57.236 29.630 0.00 0.00 39.76 3.24
4264 4847 6.647334 ATGTTGATGGTAATGTTGACAACA 57.353 33.333 22.61 22.61 45.76 3.33
4265 4848 7.273381 GCTAATGTTGATGGTAATGTTGACAAC 59.727 37.037 11.54 11.54 37.31 3.32
4266 4849 7.040132 TGCTAATGTTGATGGTAATGTTGACAA 60.040 33.333 0.00 0.00 0.00 3.18
4267 4850 6.432472 TGCTAATGTTGATGGTAATGTTGACA 59.568 34.615 0.00 0.00 0.00 3.58
4268 4851 6.851609 TGCTAATGTTGATGGTAATGTTGAC 58.148 36.000 0.00 0.00 0.00 3.18
4269 4852 7.557358 AGATGCTAATGTTGATGGTAATGTTGA 59.443 33.333 0.00 0.00 0.00 3.18
4270 4853 7.709947 AGATGCTAATGTTGATGGTAATGTTG 58.290 34.615 0.00 0.00 0.00 3.33
4271 4854 7.886629 AGATGCTAATGTTGATGGTAATGTT 57.113 32.000 0.00 0.00 0.00 2.71
4272 4855 8.213679 AGTAGATGCTAATGTTGATGGTAATGT 58.786 33.333 0.00 0.00 0.00 2.71
4273 4856 8.613060 AGTAGATGCTAATGTTGATGGTAATG 57.387 34.615 0.00 0.00 0.00 1.90
4277 4860 9.881649 CATATAGTAGATGCTAATGTTGATGGT 57.118 33.333 0.00 0.00 0.00 3.55
4292 4875 6.351711 GGCTGCCAACATCTCATATAGTAGAT 60.352 42.308 15.17 0.00 32.63 1.98
4293 4876 5.047021 GGCTGCCAACATCTCATATAGTAGA 60.047 44.000 15.17 0.00 0.00 2.59
4294 4877 5.046735 AGGCTGCCAACATCTCATATAGTAG 60.047 44.000 22.65 0.00 0.00 2.57
4295 4878 4.840680 AGGCTGCCAACATCTCATATAGTA 59.159 41.667 22.65 0.00 0.00 1.82
4296 4879 3.649981 AGGCTGCCAACATCTCATATAGT 59.350 43.478 22.65 0.00 0.00 2.12
4297 4880 4.283363 AGGCTGCCAACATCTCATATAG 57.717 45.455 22.65 0.00 0.00 1.31
4298 4881 4.712051 AAGGCTGCCAACATCTCATATA 57.288 40.909 22.65 0.00 0.00 0.86
4299 4882 3.589951 AAGGCTGCCAACATCTCATAT 57.410 42.857 22.65 0.00 0.00 1.78
4300 4883 3.370840 AAAGGCTGCCAACATCTCATA 57.629 42.857 22.65 0.00 0.00 2.15
4301 4884 2.226962 AAAGGCTGCCAACATCTCAT 57.773 45.000 22.65 0.00 0.00 2.90
4302 4885 1.999648 AAAAGGCTGCCAACATCTCA 58.000 45.000 22.65 0.00 0.00 3.27
4322 4905 8.785329 AAACATTAAACTGCAAAGAGGAAAAA 57.215 26.923 0.00 0.00 0.00 1.94
4323 4906 8.037758 TGAAACATTAAACTGCAAAGAGGAAAA 58.962 29.630 0.00 0.00 0.00 2.29
4324 4907 7.551585 TGAAACATTAAACTGCAAAGAGGAAA 58.448 30.769 0.00 0.00 0.00 3.13
4325 4908 7.106439 TGAAACATTAAACTGCAAAGAGGAA 57.894 32.000 0.00 0.00 0.00 3.36
4326 4909 6.321181 ACTGAAACATTAAACTGCAAAGAGGA 59.679 34.615 0.00 0.00 0.00 3.71
4327 4910 6.507023 ACTGAAACATTAAACTGCAAAGAGG 58.493 36.000 0.00 0.00 0.00 3.69
4328 4911 7.420800 AGACTGAAACATTAAACTGCAAAGAG 58.579 34.615 0.00 0.00 0.00 2.85
4329 4912 7.333528 AGACTGAAACATTAAACTGCAAAGA 57.666 32.000 0.00 0.00 0.00 2.52
4330 4913 7.992180 AAGACTGAAACATTAAACTGCAAAG 57.008 32.000 0.00 0.00 0.00 2.77
4331 4914 9.862371 TTAAAGACTGAAACATTAAACTGCAAA 57.138 25.926 0.00 0.00 0.00 3.68
4333 4916 9.677567 GATTAAAGACTGAAACATTAAACTGCA 57.322 29.630 0.00 0.00 0.00 4.41
4334 4917 9.129209 GGATTAAAGACTGAAACATTAAACTGC 57.871 33.333 0.00 0.00 0.00 4.40
4335 4918 9.626045 GGGATTAAAGACTGAAACATTAAACTG 57.374 33.333 0.00 0.00 0.00 3.16
4336 4919 8.803235 GGGGATTAAAGACTGAAACATTAAACT 58.197 33.333 0.00 0.00 0.00 2.66
4337 4920 8.803235 AGGGGATTAAAGACTGAAACATTAAAC 58.197 33.333 0.00 0.00 0.00 2.01
4338 4921 8.802267 CAGGGGATTAAAGACTGAAACATTAAA 58.198 33.333 0.00 0.00 0.00 1.52
4339 4922 8.167392 TCAGGGGATTAAAGACTGAAACATTAA 58.833 33.333 0.00 0.00 35.45 1.40
4340 4923 7.695055 TCAGGGGATTAAAGACTGAAACATTA 58.305 34.615 0.00 0.00 35.45 1.90
4341 4924 6.552008 TCAGGGGATTAAAGACTGAAACATT 58.448 36.000 0.00 0.00 35.45 2.71
4342 4925 6.139679 TCAGGGGATTAAAGACTGAAACAT 57.860 37.500 0.00 0.00 35.45 2.71
4343 4926 5.576563 TCAGGGGATTAAAGACTGAAACA 57.423 39.130 0.00 0.00 35.45 2.83
4344 4927 7.363007 GGAAATCAGGGGATTAAAGACTGAAAC 60.363 40.741 0.00 0.00 42.87 2.78
4345 4928 6.663523 GGAAATCAGGGGATTAAAGACTGAAA 59.336 38.462 0.00 0.00 42.87 2.69
4346 4929 6.011628 AGGAAATCAGGGGATTAAAGACTGAA 60.012 38.462 0.00 0.00 42.87 3.02
4347 4930 5.492524 AGGAAATCAGGGGATTAAAGACTGA 59.507 40.000 0.00 0.00 42.87 3.41
4348 4931 5.760131 AGGAAATCAGGGGATTAAAGACTG 58.240 41.667 0.00 0.00 42.87 3.51
4349 4932 6.408770 AAGGAAATCAGGGGATTAAAGACT 57.591 37.500 0.00 0.00 42.87 3.24
4350 4933 6.773200 CCTAAGGAAATCAGGGGATTAAAGAC 59.227 42.308 0.00 0.00 42.87 3.01
4351 4934 6.637261 GCCTAAGGAAATCAGGGGATTAAAGA 60.637 42.308 0.00 0.00 42.87 2.52
4352 4935 5.536538 GCCTAAGGAAATCAGGGGATTAAAG 59.463 44.000 0.00 0.00 42.87 1.85
4353 4936 5.195756 AGCCTAAGGAAATCAGGGGATTAAA 59.804 40.000 0.00 0.00 42.87 1.52
4354 4937 4.731929 AGCCTAAGGAAATCAGGGGATTAA 59.268 41.667 0.00 0.00 42.87 1.40
4355 4938 4.315993 AGCCTAAGGAAATCAGGGGATTA 58.684 43.478 0.00 0.00 42.87 1.75
4356 4939 3.134471 AGCCTAAGGAAATCAGGGGATT 58.866 45.455 0.00 0.00 45.57 3.01
4357 4940 2.794286 AGCCTAAGGAAATCAGGGGAT 58.206 47.619 0.00 0.00 34.43 3.85
4358 4941 2.286935 AGCCTAAGGAAATCAGGGGA 57.713 50.000 0.00 0.00 0.00 4.81
4359 4942 5.843019 TTATAGCCTAAGGAAATCAGGGG 57.157 43.478 0.00 0.00 0.00 4.79
4360 4943 6.109359 CGATTATAGCCTAAGGAAATCAGGG 58.891 44.000 0.00 0.00 0.00 4.45
4361 4944 5.582665 GCGATTATAGCCTAAGGAAATCAGG 59.417 44.000 0.00 0.00 0.00 3.86
4362 4945 6.654793 GCGATTATAGCCTAAGGAAATCAG 57.345 41.667 0.00 0.00 0.00 2.90
4375 4958 5.098893 CAGTACTCATCAGGCGATTATAGC 58.901 45.833 0.00 0.00 0.00 2.97
4376 4959 6.502136 TCAGTACTCATCAGGCGATTATAG 57.498 41.667 0.00 0.00 0.00 1.31
4377 4960 8.753497 ATATCAGTACTCATCAGGCGATTATA 57.247 34.615 0.00 0.00 0.00 0.98
4378 4961 5.991933 ATCAGTACTCATCAGGCGATTAT 57.008 39.130 0.00 0.00 0.00 1.28
4379 4962 8.624776 CATATATCAGTACTCATCAGGCGATTA 58.375 37.037 0.00 0.00 0.00 1.75
4380 4963 5.991933 ATATCAGTACTCATCAGGCGATT 57.008 39.130 0.00 0.00 0.00 3.34
4381 4964 6.460814 GCATATATCAGTACTCATCAGGCGAT 60.461 42.308 0.00 0.00 0.00 4.58
4382 4965 5.163612 GCATATATCAGTACTCATCAGGCGA 60.164 44.000 0.00 0.00 0.00 5.54
4383 4966 5.039984 GCATATATCAGTACTCATCAGGCG 58.960 45.833 0.00 0.00 0.00 5.52
4384 4967 5.970592 TGCATATATCAGTACTCATCAGGC 58.029 41.667 0.00 0.00 0.00 4.85
4385 4968 7.167924 ACTGCATATATCAGTACTCATCAGG 57.832 40.000 13.07 0.00 42.45 3.86
4401 4984 9.077885 CCCCAATTTTGTATAAGTACTGCATAT 57.922 33.333 0.00 0.00 0.00 1.78
4402 4985 7.504238 CCCCCAATTTTGTATAAGTACTGCATA 59.496 37.037 0.00 0.00 0.00 3.14
4403 4986 6.323739 CCCCCAATTTTGTATAAGTACTGCAT 59.676 38.462 0.00 0.00 0.00 3.96
4404 4987 5.654650 CCCCCAATTTTGTATAAGTACTGCA 59.345 40.000 0.00 0.00 0.00 4.41
4405 4988 5.451381 GCCCCCAATTTTGTATAAGTACTGC 60.451 44.000 0.00 0.00 0.00 4.40
4406 4989 5.068591 GGCCCCCAATTTTGTATAAGTACTG 59.931 44.000 0.00 0.00 0.00 2.74
4407 4990 5.205821 GGCCCCCAATTTTGTATAAGTACT 58.794 41.667 0.00 0.00 0.00 2.73
4408 4991 4.342951 GGGCCCCCAATTTTGTATAAGTAC 59.657 45.833 12.23 0.00 35.81 2.73
4409 4992 4.548669 GGGCCCCCAATTTTGTATAAGTA 58.451 43.478 12.23 0.00 35.81 2.24
4410 4993 3.380393 GGGCCCCCAATTTTGTATAAGT 58.620 45.455 12.23 0.00 35.81 2.24
4411 4994 2.703536 GGGGCCCCCAATTTTGTATAAG 59.296 50.000 33.01 0.00 44.65 1.73
4412 4995 2.765502 GGGGCCCCCAATTTTGTATAA 58.234 47.619 33.01 0.00 44.65 0.98
4413 4996 2.480642 GGGGCCCCCAATTTTGTATA 57.519 50.000 33.01 0.00 44.65 1.47
4414 4997 3.333009 GGGGCCCCCAATTTTGTAT 57.667 52.632 33.01 0.00 44.65 2.29
4415 4998 4.899243 GGGGCCCCCAATTTTGTA 57.101 55.556 33.01 0.00 44.65 2.41
4424 5007 1.995066 CCAAAAATCTGGGGCCCCC 60.995 63.158 38.81 20.71 45.71 5.40
4425 5008 3.726004 CCAAAAATCTGGGGCCCC 58.274 61.111 36.14 36.14 32.32 5.80
4431 5014 1.080907 AGGGCCCCCAAAAATCTGG 59.919 57.895 21.43 0.00 38.92 3.86
4432 5015 0.545071 ACAGGGCCCCCAAAAATCTG 60.545 55.000 21.43 9.52 38.92 2.90
4433 5016 0.545071 CACAGGGCCCCCAAAAATCT 60.545 55.000 21.43 0.00 38.92 2.40
4434 5017 1.982430 CACAGGGCCCCCAAAAATC 59.018 57.895 21.43 0.00 38.92 2.17
4435 5018 2.223443 GCACAGGGCCCCCAAAAAT 61.223 57.895 21.43 0.00 38.92 1.82
4436 5019 2.846754 GCACAGGGCCCCCAAAAA 60.847 61.111 21.43 0.00 38.92 1.94
4437 5020 4.163463 TGCACAGGGCCCCCAAAA 62.163 61.111 21.43 0.00 43.89 2.44
4438 5021 4.619320 CTGCACAGGGCCCCCAAA 62.619 66.667 21.43 0.00 43.89 3.28
4470 5053 1.451927 AGGCCCGTACATGCACATG 60.452 57.895 9.06 9.06 44.15 3.21
4471 5054 1.451927 CAGGCCCGTACATGCACAT 60.452 57.895 0.00 0.00 0.00 3.21
4472 5055 2.046411 CAGGCCCGTACATGCACA 60.046 61.111 0.00 0.00 0.00 4.57
4473 5056 2.824041 CCAGGCCCGTACATGCAC 60.824 66.667 0.00 0.00 0.00 4.57
4474 5057 3.326578 ACCAGGCCCGTACATGCA 61.327 61.111 0.00 0.00 0.00 3.96
4475 5058 2.824041 CACCAGGCCCGTACATGC 60.824 66.667 0.00 0.00 0.00 4.06
4476 5059 2.824041 GCACCAGGCCCGTACATG 60.824 66.667 0.00 0.00 36.11 3.21
4477 5060 3.009115 AGCACCAGGCCCGTACAT 61.009 61.111 0.00 0.00 46.50 2.29
4478 5061 4.015406 CAGCACCAGGCCCGTACA 62.015 66.667 0.00 0.00 46.50 2.90
4479 5062 3.952628 GACAGCACCAGGCCCGTAC 62.953 68.421 0.00 0.00 46.50 3.67
4480 5063 3.702048 GACAGCACCAGGCCCGTA 61.702 66.667 0.00 0.00 46.50 4.02
4483 5066 4.729918 CCTGACAGCACCAGGCCC 62.730 72.222 0.00 0.00 43.93 5.80
4487 5070 0.588252 CGAAAACCTGACAGCACCAG 59.412 55.000 0.00 0.00 0.00 4.00
4488 5071 1.444119 GCGAAAACCTGACAGCACCA 61.444 55.000 0.00 0.00 0.00 4.17
4489 5072 1.282875 GCGAAAACCTGACAGCACC 59.717 57.895 0.00 0.00 0.00 5.01
4490 5073 0.317020 GTGCGAAAACCTGACAGCAC 60.317 55.000 0.00 2.63 46.03 4.40
4491 5074 1.444119 GGTGCGAAAACCTGACAGCA 61.444 55.000 0.00 0.00 37.24 4.41
4492 5075 1.282875 GGTGCGAAAACCTGACAGC 59.717 57.895 0.00 0.00 37.24 4.40
4493 5076 1.238439 ATGGTGCGAAAACCTGACAG 58.762 50.000 0.00 0.00 41.16 3.51
4494 5077 2.224426 ACTATGGTGCGAAAACCTGACA 60.224 45.455 4.32 0.00 41.16 3.58
4540 5125 2.391130 ACTGCCAGGAAACCCACCA 61.391 57.895 0.00 0.00 0.00 4.17
4575 5160 3.835478 TCAGGAGGAGAGGAAAGAGAA 57.165 47.619 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.