Multiple sequence alignment - TraesCS7A01G323900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G323900 chr7A 100.000 2622 0 0 1 2622 471003919 471006540 0.000000e+00 4843
1 TraesCS7A01G323900 chr5D 91.090 954 76 5 644 1596 310023512 310022567 0.000000e+00 1282
2 TraesCS7A01G323900 chr5D 77.640 322 57 7 1290 1596 509143478 509143799 5.760000e-42 182
3 TraesCS7A01G323900 chr7D 93.926 675 32 6 1954 2622 18121516 18122187 0.000000e+00 1011
4 TraesCS7A01G323900 chr7D 93.778 675 29 8 1955 2622 186631928 186632596 0.000000e+00 1002
5 TraesCS7A01G323900 chr7D 84.960 379 29 13 4 359 411009342 411008969 2.480000e-95 359
6 TraesCS7A01G323900 chr7D 83.382 343 25 9 1601 1914 410979665 410979326 3.300000e-74 289
7 TraesCS7A01G323900 chr1D 93.796 677 27 13 1950 2622 58116627 58117292 0.000000e+00 1003
8 TraesCS7A01G323900 chr1D 94.251 661 27 7 1965 2622 46201367 46200715 0.000000e+00 1000
9 TraesCS7A01G323900 chr3A 94.242 660 31 3 1966 2622 468425948 468426603 0.000000e+00 1002
10 TraesCS7A01G323900 chr3D 93.778 675 26 9 1961 2622 607267872 607268543 0.000000e+00 1000
11 TraesCS7A01G323900 chr6D 93.572 669 30 5 1964 2622 143498753 143498088 0.000000e+00 985
12 TraesCS7A01G323900 chr6D 77.989 895 122 38 726 1596 456656897 456656054 2.340000e-135 492
13 TraesCS7A01G323900 chr4D 93.274 669 36 4 1957 2622 346122023 346121361 0.000000e+00 977
14 TraesCS7A01G323900 chr2A 93.016 673 37 6 1953 2622 158605502 158606167 0.000000e+00 974
15 TraesCS7A01G323900 chr2D 86.975 476 40 10 648 1106 460640540 460641010 1.390000e-142 516
16 TraesCS7A01G323900 chr2D 92.308 351 27 0 1049 1399 460641000 460641350 1.400000e-137 499
17 TraesCS7A01G323900 chr2D 89.931 288 28 1 1310 1596 460641351 460641638 1.150000e-98 370
18 TraesCS7A01G323900 chr2D 76.023 342 63 12 1267 1596 288224617 288224283 2.700000e-35 159
19 TraesCS7A01G323900 chr2D 80.978 184 28 5 1419 1596 649679681 649679499 3.520000e-29 139
20 TraesCS7A01G323900 chr7B 84.828 435 38 10 1 411 424569070 424569500 1.880000e-111 412
21 TraesCS7A01G323900 chr7B 78.979 333 61 9 1269 1596 100349782 100350110 4.390000e-53 219
22 TraesCS7A01G323900 chr7B 88.312 154 15 3 409 560 424570650 424570802 5.760000e-42 182
23 TraesCS7A01G323900 chr7B 76.126 222 49 3 1288 1506 274322422 274322642 2.130000e-21 113
24 TraesCS7A01G323900 chr5B 91.667 156 13 0 1441 1596 684898278 684898433 1.580000e-52 217
25 TraesCS7A01G323900 chr5B 76.324 321 62 10 1289 1596 208414289 208414608 2.700000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G323900 chr7A 471003919 471006540 2621 False 4843.000000 4843 100.000 1 2622 1 chr7A.!!$F1 2621
1 TraesCS7A01G323900 chr5D 310022567 310023512 945 True 1282.000000 1282 91.090 644 1596 1 chr5D.!!$R1 952
2 TraesCS7A01G323900 chr7D 18121516 18122187 671 False 1011.000000 1011 93.926 1954 2622 1 chr7D.!!$F1 668
3 TraesCS7A01G323900 chr7D 186631928 186632596 668 False 1002.000000 1002 93.778 1955 2622 1 chr7D.!!$F2 667
4 TraesCS7A01G323900 chr1D 58116627 58117292 665 False 1003.000000 1003 93.796 1950 2622 1 chr1D.!!$F1 672
5 TraesCS7A01G323900 chr1D 46200715 46201367 652 True 1000.000000 1000 94.251 1965 2622 1 chr1D.!!$R1 657
6 TraesCS7A01G323900 chr3A 468425948 468426603 655 False 1002.000000 1002 94.242 1966 2622 1 chr3A.!!$F1 656
7 TraesCS7A01G323900 chr3D 607267872 607268543 671 False 1000.000000 1000 93.778 1961 2622 1 chr3D.!!$F1 661
8 TraesCS7A01G323900 chr6D 143498088 143498753 665 True 985.000000 985 93.572 1964 2622 1 chr6D.!!$R1 658
9 TraesCS7A01G323900 chr6D 456656054 456656897 843 True 492.000000 492 77.989 726 1596 1 chr6D.!!$R2 870
10 TraesCS7A01G323900 chr4D 346121361 346122023 662 True 977.000000 977 93.274 1957 2622 1 chr4D.!!$R1 665
11 TraesCS7A01G323900 chr2A 158605502 158606167 665 False 974.000000 974 93.016 1953 2622 1 chr2A.!!$F1 669
12 TraesCS7A01G323900 chr2D 460640540 460641638 1098 False 461.666667 516 89.738 648 1596 3 chr2D.!!$F1 948
13 TraesCS7A01G323900 chr7B 424569070 424570802 1732 False 297.000000 412 86.570 1 560 2 chr7B.!!$F3 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
550 1728 0.248458 AACGTTTTGGCTGCTTGTCG 60.248 50.0 0.0 1.76 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1734 3086 0.031178 CAATGATTTGGCGGGCTAGC 59.969 55.0 6.04 6.04 0.0 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 28 1.476891 GGTTGCCACGTGATAGAGAGA 59.523 52.381 19.30 0.00 0.00 3.10
26 29 2.480416 GGTTGCCACGTGATAGAGAGAG 60.480 54.545 19.30 0.00 0.00 3.20
33 36 3.491639 CACGTGATAGAGAGAGTAGTCGG 59.508 52.174 10.90 0.00 0.00 4.79
49 52 1.941975 GTCGGGTTTCGGAAGTTTGAA 59.058 47.619 0.00 0.00 39.77 2.69
50 53 2.355444 GTCGGGTTTCGGAAGTTTGAAA 59.645 45.455 1.38 1.38 39.77 2.69
62 65 9.458374 TTCGGAAGTTTGAAATTCAAATAGTTC 57.542 29.630 21.97 21.24 46.55 3.01
85 88 7.789341 TCGGTTCAAATTTAAATCATGTTCG 57.211 32.000 0.10 9.38 0.00 3.95
113 131 7.336161 TCTTTTAGAACAAAAATCAACGGGA 57.664 32.000 0.00 0.00 0.00 5.14
125 143 3.380471 TCAACGGGATTGATGGGAATT 57.620 42.857 0.00 0.00 42.62 2.17
126 144 4.511786 TCAACGGGATTGATGGGAATTA 57.488 40.909 0.00 0.00 42.62 1.40
127 145 4.460263 TCAACGGGATTGATGGGAATTAG 58.540 43.478 0.00 0.00 42.62 1.73
129 147 4.788925 ACGGGATTGATGGGAATTAGAA 57.211 40.909 0.00 0.00 0.00 2.10
130 148 4.461198 ACGGGATTGATGGGAATTAGAAC 58.539 43.478 0.00 0.00 0.00 3.01
131 149 4.080015 ACGGGATTGATGGGAATTAGAACA 60.080 41.667 0.00 0.00 0.00 3.18
132 150 4.516698 CGGGATTGATGGGAATTAGAACAG 59.483 45.833 0.00 0.00 0.00 3.16
133 151 4.279420 GGGATTGATGGGAATTAGAACAGC 59.721 45.833 0.00 0.00 0.00 4.40
166 184 1.200020 GGATTTGAGGCGGTTCACAAG 59.800 52.381 0.00 0.00 0.00 3.16
181 199 2.102420 TCACAAGTCACGAGTCAATGGT 59.898 45.455 0.00 0.00 0.00 3.55
190 208 0.908198 GAGTCAATGGTGGAGAGGCT 59.092 55.000 0.00 0.00 0.00 4.58
192 210 1.028868 GTCAATGGTGGAGAGGCTGC 61.029 60.000 0.00 0.00 0.00 5.25
213 231 0.984230 AGTGATGATTGGGACGTGGT 59.016 50.000 0.00 0.00 0.00 4.16
227 251 1.153329 GTGGTTGTGTCCGTGTCCA 60.153 57.895 0.00 0.00 0.00 4.02
231 255 1.305201 GTTGTGTCCGTGTCCATGTT 58.695 50.000 0.00 0.00 0.00 2.71
252 276 1.745087 CGTTTATGTGCCCATCAAGCT 59.255 47.619 0.00 0.00 32.29 3.74
256 280 0.901114 ATGTGCCCATCAAGCTTGCA 60.901 50.000 21.99 12.87 0.00 4.08
338 363 6.048732 GACAAAATGTCATGGGGGTTATTT 57.951 37.500 5.65 0.00 46.22 1.40
343 368 4.133526 TGTCATGGGGGTTATTTCCAAA 57.866 40.909 0.00 0.00 33.90 3.28
397 422 9.724839 TTAGAAAATTAACAAAGAGTTTCGTGG 57.275 29.630 0.00 0.00 41.64 4.94
398 423 7.200455 AGAAAATTAACAAAGAGTTTCGTGGG 58.800 34.615 0.00 0.00 41.64 4.61
400 425 2.721425 AACAAAGAGTTTCGTGGGGA 57.279 45.000 0.00 0.00 37.03 4.81
401 426 1.963172 ACAAAGAGTTTCGTGGGGAC 58.037 50.000 0.00 0.00 0.00 4.46
415 1592 3.682155 CGTGGGGACGATGGGTAAATTTA 60.682 47.826 0.00 0.00 34.64 1.40
427 1604 5.511363 TGGGTAAATTTAACCACGGATCAT 58.489 37.500 27.68 0.00 45.25 2.45
432 1609 7.486870 GGTAAATTTAACCACGGATCATTTGTC 59.513 37.037 1.48 0.00 36.96 3.18
435 1612 3.417069 AACCACGGATCATTTGTCTGA 57.583 42.857 0.00 0.00 0.00 3.27
436 1613 3.417069 ACCACGGATCATTTGTCTGAA 57.583 42.857 0.00 0.00 0.00 3.02
437 1614 3.338249 ACCACGGATCATTTGTCTGAAG 58.662 45.455 0.00 0.00 0.00 3.02
438 1615 2.679837 CCACGGATCATTTGTCTGAAGG 59.320 50.000 0.00 0.00 0.00 3.46
439 1616 3.599343 CACGGATCATTTGTCTGAAGGA 58.401 45.455 0.00 0.00 0.00 3.36
441 1618 4.637534 CACGGATCATTTGTCTGAAGGAAT 59.362 41.667 0.00 0.00 0.00 3.01
442 1619 4.878397 ACGGATCATTTGTCTGAAGGAATC 59.122 41.667 0.00 0.00 0.00 2.52
443 1620 4.025396 CGGATCATTTGTCTGAAGGAATCG 60.025 45.833 0.00 0.00 0.00 3.34
444 1621 5.118990 GGATCATTTGTCTGAAGGAATCGA 58.881 41.667 0.00 0.00 0.00 3.59
451 1629 1.890489 TCTGAAGGAATCGACAACGGA 59.110 47.619 0.00 0.00 40.21 4.69
463 1641 1.274167 GACAACGGATGACTGTGGGTA 59.726 52.381 0.00 0.00 35.61 3.69
469 1647 3.069586 ACGGATGACTGTGGGTATGTATG 59.930 47.826 0.00 0.00 33.97 2.39
475 1653 3.895656 GACTGTGGGTATGTATGGAGCTA 59.104 47.826 0.00 0.00 0.00 3.32
479 1657 6.557253 ACTGTGGGTATGTATGGAGCTATTTA 59.443 38.462 0.00 0.00 0.00 1.40
485 1663 7.707035 GGGTATGTATGGAGCTATTTAGATTCG 59.293 40.741 0.00 0.00 0.00 3.34
495 1673 1.502690 TTTAGATTCGGCCCCTGCTA 58.497 50.000 0.00 0.00 37.74 3.49
550 1728 0.248458 AACGTTTTGGCTGCTTGTCG 60.248 50.000 0.00 1.76 0.00 4.35
574 1752 5.933790 CCAAATTGGCATGAAAGTGAATTG 58.066 37.500 0.00 0.00 0.00 2.32
575 1753 5.387279 CAAATTGGCATGAAAGTGAATTGC 58.613 37.500 0.00 0.00 0.00 3.56
576 1754 3.747854 TTGGCATGAAAGTGAATTGCA 57.252 38.095 0.00 0.00 35.04 4.08
577 1755 3.747854 TGGCATGAAAGTGAATTGCAA 57.252 38.095 0.00 0.00 35.04 4.08
578 1756 3.391965 TGGCATGAAAGTGAATTGCAAC 58.608 40.909 0.00 0.00 35.04 4.17
579 1757 2.738314 GGCATGAAAGTGAATTGCAACC 59.262 45.455 0.00 0.00 35.04 3.77
580 1758 3.391965 GCATGAAAGTGAATTGCAACCA 58.608 40.909 0.00 0.00 33.58 3.67
581 1759 3.184986 GCATGAAAGTGAATTGCAACCAC 59.815 43.478 20.21 20.21 33.58 4.16
582 1760 3.451141 TGAAAGTGAATTGCAACCACC 57.549 42.857 22.68 12.81 0.00 4.61
583 1761 2.762887 TGAAAGTGAATTGCAACCACCA 59.237 40.909 22.68 14.60 0.00 4.17
584 1762 3.196469 TGAAAGTGAATTGCAACCACCAA 59.804 39.130 22.68 9.37 0.00 3.67
585 1763 3.902881 AAGTGAATTGCAACCACCAAA 57.097 38.095 22.68 0.00 0.00 3.28
586 1764 3.902881 AGTGAATTGCAACCACCAAAA 57.097 38.095 22.68 0.00 0.00 2.44
587 1765 3.530535 AGTGAATTGCAACCACCAAAAC 58.469 40.909 22.68 6.49 0.00 2.43
588 1766 3.055530 AGTGAATTGCAACCACCAAAACA 60.056 39.130 22.68 4.08 0.00 2.83
589 1767 3.686726 GTGAATTGCAACCACCAAAACAA 59.313 39.130 18.14 0.00 0.00 2.83
590 1768 4.154918 GTGAATTGCAACCACCAAAACAAA 59.845 37.500 18.14 0.00 0.00 2.83
591 1769 4.946157 TGAATTGCAACCACCAAAACAAAT 59.054 33.333 0.00 0.00 0.00 2.32
592 1770 4.897025 ATTGCAACCACCAAAACAAATG 57.103 36.364 0.00 0.00 0.00 2.32
593 1771 2.012673 TGCAACCACCAAAACAAATGC 58.987 42.857 0.00 0.00 0.00 3.56
594 1772 2.012673 GCAACCACCAAAACAAATGCA 58.987 42.857 0.00 0.00 33.00 3.96
595 1773 2.223226 GCAACCACCAAAACAAATGCAC 60.223 45.455 0.00 0.00 33.00 4.57
596 1774 3.005554 CAACCACCAAAACAAATGCACA 58.994 40.909 0.00 0.00 0.00 4.57
597 1775 3.340814 ACCACCAAAACAAATGCACAA 57.659 38.095 0.00 0.00 0.00 3.33
598 1776 3.883669 ACCACCAAAACAAATGCACAAT 58.116 36.364 0.00 0.00 0.00 2.71
599 1777 5.028549 ACCACCAAAACAAATGCACAATA 57.971 34.783 0.00 0.00 0.00 1.90
600 1778 5.055812 ACCACCAAAACAAATGCACAATAG 58.944 37.500 0.00 0.00 0.00 1.73
601 1779 5.055812 CCACCAAAACAAATGCACAATAGT 58.944 37.500 0.00 0.00 0.00 2.12
602 1780 5.177327 CCACCAAAACAAATGCACAATAGTC 59.823 40.000 0.00 0.00 0.00 2.59
603 1781 5.752472 CACCAAAACAAATGCACAATAGTCA 59.248 36.000 0.00 0.00 0.00 3.41
604 1782 6.257411 CACCAAAACAAATGCACAATAGTCAA 59.743 34.615 0.00 0.00 0.00 3.18
605 1783 6.257630 ACCAAAACAAATGCACAATAGTCAAC 59.742 34.615 0.00 0.00 0.00 3.18
606 1784 6.257411 CCAAAACAAATGCACAATAGTCAACA 59.743 34.615 0.00 0.00 0.00 3.33
607 1785 7.041916 CCAAAACAAATGCACAATAGTCAACAT 60.042 33.333 0.00 0.00 0.00 2.71
608 1786 8.336806 CAAAACAAATGCACAATAGTCAACATT 58.663 29.630 0.00 0.00 0.00 2.71
609 1787 8.436046 AAACAAATGCACAATAGTCAACATTT 57.564 26.923 0.00 0.00 35.13 2.32
610 1788 7.642071 ACAAATGCACAATAGTCAACATTTC 57.358 32.000 0.00 0.00 33.74 2.17
611 1789 7.436118 ACAAATGCACAATAGTCAACATTTCT 58.564 30.769 0.00 0.00 33.74 2.52
612 1790 7.927629 ACAAATGCACAATAGTCAACATTTCTT 59.072 29.630 0.00 0.00 33.74 2.52
613 1791 9.409312 CAAATGCACAATAGTCAACATTTCTTA 57.591 29.630 0.00 0.00 33.74 2.10
624 1802 8.862325 AGTCAACATTTCTTATTACATCCACA 57.138 30.769 0.00 0.00 0.00 4.17
625 1803 9.466497 AGTCAACATTTCTTATTACATCCACAT 57.534 29.630 0.00 0.00 0.00 3.21
634 1812 8.760980 TCTTATTACATCCACATTAAAAGGGG 57.239 34.615 0.00 0.00 0.00 4.79
635 1813 8.561769 TCTTATTACATCCACATTAAAAGGGGA 58.438 33.333 4.89 4.89 0.00 4.81
636 1814 8.528044 TTATTACATCCACATTAAAAGGGGAC 57.472 34.615 4.54 0.00 0.00 4.46
637 1815 4.396357 ACATCCACATTAAAAGGGGACA 57.604 40.909 4.54 0.00 0.00 4.02
638 1816 4.746466 ACATCCACATTAAAAGGGGACAA 58.254 39.130 4.54 0.00 0.00 3.18
639 1817 4.526650 ACATCCACATTAAAAGGGGACAAC 59.473 41.667 4.54 0.00 0.00 3.32
640 1818 4.186077 TCCACATTAAAAGGGGACAACA 57.814 40.909 0.00 0.00 0.00 3.33
641 1819 4.746466 TCCACATTAAAAGGGGACAACAT 58.254 39.130 0.00 0.00 0.00 2.71
642 1820 4.526262 TCCACATTAAAAGGGGACAACATG 59.474 41.667 0.00 0.00 0.00 3.21
643 1821 4.244862 CACATTAAAAGGGGACAACATGC 58.755 43.478 0.00 0.00 0.00 4.06
644 1822 3.056891 ACATTAAAAGGGGACAACATGCG 60.057 43.478 0.00 0.00 0.00 4.73
645 1823 2.279935 TAAAAGGGGACAACATGCGT 57.720 45.000 0.00 0.00 0.00 5.24
646 1824 1.408969 AAAAGGGGACAACATGCGTT 58.591 45.000 0.00 0.00 35.01 4.84
685 1863 2.046604 GGAAAACCCTAGCCGCGT 60.047 61.111 4.92 0.00 0.00 6.01
699 1877 4.125695 GCGTCGCCGGGACTACTT 62.126 66.667 17.48 0.00 43.79 2.24
716 1894 4.779733 TCCACCTCCTCCCTCGCC 62.780 72.222 0.00 0.00 0.00 5.54
760 1938 4.752879 GAAGCCGTGCGTGCCCTA 62.753 66.667 0.00 0.00 0.00 3.53
844 2022 2.349755 CGGTTGGTGGATCCGGTT 59.650 61.111 7.39 0.00 40.49 4.44
851 2029 4.321966 TGGATCCGGTTGTGCGCA 62.322 61.111 5.66 5.66 0.00 6.09
953 2148 2.844362 CGGCATGGAGAGGGCCTA 60.844 66.667 5.73 0.00 45.53 3.93
982 2177 0.250640 GCTGGATCCGGCATCAGATT 60.251 55.000 36.00 0.00 46.81 2.40
984 2179 1.347050 CTGGATCCGGCATCAGATTCT 59.653 52.381 7.89 0.00 32.33 2.40
1121 2377 1.065410 TGGTTGGAGGTGGATGTGGT 61.065 55.000 0.00 0.00 0.00 4.16
1146 2403 1.002624 GAAGTGGGTCGGCATGGAA 60.003 57.895 0.00 0.00 0.00 3.53
1157 2414 2.825836 CATGGAAGGCAGGGCGTC 60.826 66.667 0.28 0.28 0.00 5.19
1187 2444 2.123854 TCCGGCGTGGATAGCTCT 60.124 61.111 6.01 0.00 43.74 4.09
1208 2465 2.043349 TCTGCCCTAGCGTGCCTA 60.043 61.111 0.00 0.00 44.31 3.93
1252 2510 4.938756 TGGAGGTGGTGGGGGCTT 62.939 66.667 0.00 0.00 0.00 4.35
1258 2516 2.534011 TGGTGGGGGCTTGATCCA 60.534 61.111 0.00 0.00 0.00 3.41
1264 2522 1.531748 GGGGCTTGATCCAATCCGA 59.468 57.895 0.00 0.00 31.20 4.55
1323 2671 1.737363 GCGAACTGCTACTCTTCCTGG 60.737 57.143 0.00 0.00 41.73 4.45
1338 2686 4.572571 TGGTGCGGTGGTTGACCC 62.573 66.667 0.00 0.00 42.62 4.46
1361 2709 2.047274 CGCAACTCCGATGGGTGT 60.047 61.111 0.00 0.00 41.67 4.16
1414 2762 1.433879 CTTCGAAGAGGCCGACGAT 59.566 57.895 20.74 1.88 38.43 3.73
1415 2763 0.661552 CTTCGAAGAGGCCGACGATA 59.338 55.000 20.74 7.54 38.43 2.92
1431 2779 2.279502 GATAGTGACGCTCGTGGGCA 62.280 60.000 0.00 0.00 0.00 5.36
1488 2836 3.403558 GCTCCCTTCCTCGGGCTT 61.404 66.667 0.00 0.00 44.30 4.35
1596 2948 1.680249 GGAGTCTCAATGGTGGGCTTC 60.680 57.143 1.47 0.00 0.00 3.86
1597 2949 1.280421 GAGTCTCAATGGTGGGCTTCT 59.720 52.381 0.00 0.00 0.00 2.85
1598 2950 2.501723 GAGTCTCAATGGTGGGCTTCTA 59.498 50.000 0.00 0.00 0.00 2.10
1599 2951 2.503356 AGTCTCAATGGTGGGCTTCTAG 59.497 50.000 0.00 0.00 0.00 2.43
1600 2952 1.839994 TCTCAATGGTGGGCTTCTAGG 59.160 52.381 0.00 0.00 0.00 3.02
1601 2953 1.839994 CTCAATGGTGGGCTTCTAGGA 59.160 52.381 0.00 0.00 0.00 2.94
1602 2954 2.441001 CTCAATGGTGGGCTTCTAGGAT 59.559 50.000 0.00 0.00 0.00 3.24
1603 2955 2.173356 TCAATGGTGGGCTTCTAGGATG 59.827 50.000 0.00 0.00 0.00 3.51
1604 2956 1.898863 ATGGTGGGCTTCTAGGATGT 58.101 50.000 0.00 0.00 0.00 3.06
1605 2957 1.668826 TGGTGGGCTTCTAGGATGTT 58.331 50.000 0.00 0.00 0.00 2.71
1606 2958 1.992557 TGGTGGGCTTCTAGGATGTTT 59.007 47.619 0.00 0.00 0.00 2.83
1607 2959 2.378547 TGGTGGGCTTCTAGGATGTTTT 59.621 45.455 0.00 0.00 0.00 2.43
1608 2960 3.017442 GGTGGGCTTCTAGGATGTTTTC 58.983 50.000 0.00 0.00 0.00 2.29
1609 2961 2.678336 GTGGGCTTCTAGGATGTTTTCG 59.322 50.000 0.00 0.00 0.00 3.46
1610 2962 2.304761 TGGGCTTCTAGGATGTTTTCGT 59.695 45.455 0.00 0.00 0.00 3.85
1611 2963 3.244770 TGGGCTTCTAGGATGTTTTCGTT 60.245 43.478 0.00 0.00 0.00 3.85
1612 2964 4.020039 TGGGCTTCTAGGATGTTTTCGTTA 60.020 41.667 0.00 0.00 0.00 3.18
1613 2965 4.571176 GGGCTTCTAGGATGTTTTCGTTAG 59.429 45.833 0.00 0.00 0.00 2.34
1614 2966 5.416947 GGCTTCTAGGATGTTTTCGTTAGA 58.583 41.667 0.00 0.00 0.00 2.10
1615 2967 5.873164 GGCTTCTAGGATGTTTTCGTTAGAA 59.127 40.000 0.00 0.00 33.62 2.10
1616 2968 6.370718 GGCTTCTAGGATGTTTTCGTTAGAAA 59.629 38.462 0.00 0.00 43.91 2.52
1637 2989 8.611654 AGAAAAATGACAAAGATTTTCATGGG 57.388 30.769 15.43 0.00 41.77 4.00
1638 2990 7.662669 AGAAAAATGACAAAGATTTTCATGGGG 59.337 33.333 15.43 0.00 41.77 4.96
1639 2991 5.425196 AATGACAAAGATTTTCATGGGGG 57.575 39.130 0.00 0.00 30.26 5.40
1640 2992 2.566724 TGACAAAGATTTTCATGGGGGC 59.433 45.455 0.00 0.00 0.00 5.80
1641 2993 1.550072 ACAAAGATTTTCATGGGGGCG 59.450 47.619 0.00 0.00 0.00 6.13
1642 2994 1.824230 CAAAGATTTTCATGGGGGCGA 59.176 47.619 0.00 0.00 0.00 5.54
1643 2995 2.431782 CAAAGATTTTCATGGGGGCGAT 59.568 45.455 0.00 0.00 0.00 4.58
1644 2996 1.696063 AGATTTTCATGGGGGCGATG 58.304 50.000 0.00 0.00 0.00 3.84
1645 2997 0.675633 GATTTTCATGGGGGCGATGG 59.324 55.000 0.00 0.00 0.00 3.51
1646 2998 0.760189 ATTTTCATGGGGGCGATGGG 60.760 55.000 0.00 0.00 0.00 4.00
1647 2999 2.161713 TTTTCATGGGGGCGATGGGT 62.162 55.000 0.00 0.00 0.00 4.51
1648 3000 1.282653 TTTCATGGGGGCGATGGGTA 61.283 55.000 0.00 0.00 0.00 3.69
1649 3001 1.065410 TTCATGGGGGCGATGGGTAT 61.065 55.000 0.00 0.00 0.00 2.73
1650 3002 0.178888 TCATGGGGGCGATGGGTATA 60.179 55.000 0.00 0.00 0.00 1.47
1651 3003 0.918983 CATGGGGGCGATGGGTATAT 59.081 55.000 0.00 0.00 0.00 0.86
1652 3004 1.284785 CATGGGGGCGATGGGTATATT 59.715 52.381 0.00 0.00 0.00 1.28
1653 3005 0.988832 TGGGGGCGATGGGTATATTC 59.011 55.000 0.00 0.00 0.00 1.75
1654 3006 0.988832 GGGGGCGATGGGTATATTCA 59.011 55.000 0.00 0.00 0.00 2.57
1655 3007 1.339727 GGGGGCGATGGGTATATTCAC 60.340 57.143 0.00 0.00 0.00 3.18
1656 3008 1.339727 GGGGCGATGGGTATATTCACC 60.340 57.143 0.00 0.00 37.91 4.02
1657 3009 1.349688 GGGCGATGGGTATATTCACCA 59.650 52.381 0.00 0.00 40.65 4.17
1658 3010 2.423577 GGCGATGGGTATATTCACCAC 58.576 52.381 0.00 0.00 40.65 4.16
1659 3011 2.423577 GCGATGGGTATATTCACCACC 58.576 52.381 0.00 0.00 40.65 4.61
1660 3012 2.683968 CGATGGGTATATTCACCACCG 58.316 52.381 0.00 0.00 40.65 4.94
1661 3013 2.297880 CGATGGGTATATTCACCACCGA 59.702 50.000 1.66 0.00 40.65 4.69
1662 3014 3.056107 CGATGGGTATATTCACCACCGAT 60.056 47.826 1.66 0.00 40.65 4.18
1663 3015 4.562757 CGATGGGTATATTCACCACCGATT 60.563 45.833 1.66 0.00 40.65 3.34
1664 3016 5.336929 CGATGGGTATATTCACCACCGATTA 60.337 44.000 1.66 0.00 40.65 1.75
1665 3017 6.629515 CGATGGGTATATTCACCACCGATTAT 60.630 42.308 1.66 0.00 40.65 1.28
1666 3018 6.442541 TGGGTATATTCACCACCGATTATT 57.557 37.500 0.00 0.00 40.65 1.40
1667 3019 6.843752 TGGGTATATTCACCACCGATTATTT 58.156 36.000 0.00 0.00 40.65 1.40
1668 3020 6.712998 TGGGTATATTCACCACCGATTATTTG 59.287 38.462 0.00 0.00 40.65 2.32
1669 3021 6.713450 GGGTATATTCACCACCGATTATTTGT 59.287 38.462 0.00 0.00 40.65 2.83
1670 3022 7.229907 GGGTATATTCACCACCGATTATTTGTT 59.770 37.037 0.00 0.00 40.65 2.83
1671 3023 8.626526 GGTATATTCACCACCGATTATTTGTTT 58.373 33.333 0.00 0.00 38.55 2.83
1672 3024 9.445786 GTATATTCACCACCGATTATTTGTTTG 57.554 33.333 0.00 0.00 0.00 2.93
1673 3025 5.776173 TTCACCACCGATTATTTGTTTGT 57.224 34.783 0.00 0.00 0.00 2.83
1674 3026 5.114785 TCACCACCGATTATTTGTTTGTG 57.885 39.130 0.00 0.00 0.00 3.33
1675 3027 4.822350 TCACCACCGATTATTTGTTTGTGA 59.178 37.500 0.00 0.00 0.00 3.58
1676 3028 5.299531 TCACCACCGATTATTTGTTTGTGAA 59.700 36.000 0.00 0.00 0.00 3.18
1677 3029 5.629020 CACCACCGATTATTTGTTTGTGAAG 59.371 40.000 0.00 0.00 0.00 3.02
1678 3030 5.160641 CCACCGATTATTTGTTTGTGAAGG 58.839 41.667 0.00 0.00 0.00 3.46
1679 3031 5.048364 CCACCGATTATTTGTTTGTGAAGGA 60.048 40.000 0.00 0.00 0.00 3.36
1680 3032 6.442952 CACCGATTATTTGTTTGTGAAGGAA 58.557 36.000 0.00 0.00 0.00 3.36
1681 3033 7.090173 CACCGATTATTTGTTTGTGAAGGAAT 58.910 34.615 0.00 0.00 0.00 3.01
1682 3034 7.273381 CACCGATTATTTGTTTGTGAAGGAATC 59.727 37.037 0.00 0.00 0.00 2.52
1683 3035 7.040062 ACCGATTATTTGTTTGTGAAGGAATCA 60.040 33.333 0.00 0.00 35.05 2.57
1684 3036 7.812191 CCGATTATTTGTTTGTGAAGGAATCAA 59.188 33.333 0.00 0.00 40.50 2.57
1685 3037 8.638565 CGATTATTTGTTTGTGAAGGAATCAAC 58.361 33.333 0.00 0.00 40.50 3.18
1686 3038 9.474920 GATTATTTGTTTGTGAAGGAATCAACA 57.525 29.630 0.00 0.00 40.50 3.33
1687 3039 9.829507 ATTATTTGTTTGTGAAGGAATCAACAA 57.170 25.926 0.00 0.00 40.50 2.83
1688 3040 6.959671 TTTGTTTGTGAAGGAATCAACAAC 57.040 33.333 0.00 0.00 40.50 3.32
1689 3041 5.651387 TGTTTGTGAAGGAATCAACAACA 57.349 34.783 0.00 0.00 40.50 3.33
1690 3042 6.030548 TGTTTGTGAAGGAATCAACAACAA 57.969 33.333 0.00 0.00 40.50 2.83
1691 3043 5.866633 TGTTTGTGAAGGAATCAACAACAAC 59.133 36.000 0.00 0.00 40.50 3.32
1692 3044 4.285807 TGTGAAGGAATCAACAACAACG 57.714 40.909 0.00 0.00 40.50 4.10
1693 3045 3.066064 TGTGAAGGAATCAACAACAACGG 59.934 43.478 0.00 0.00 40.50 4.44
1694 3046 2.621055 TGAAGGAATCAACAACAACGGG 59.379 45.455 0.00 0.00 34.30 5.28
1695 3047 2.358322 AGGAATCAACAACAACGGGT 57.642 45.000 0.00 0.00 0.00 5.28
1696 3048 1.953686 AGGAATCAACAACAACGGGTG 59.046 47.619 0.00 0.00 0.00 4.61
1697 3049 1.950909 GGAATCAACAACAACGGGTGA 59.049 47.619 0.00 0.00 0.00 4.02
1698 3050 2.287368 GGAATCAACAACAACGGGTGAC 60.287 50.000 0.00 0.00 0.00 3.67
1699 3051 2.341846 ATCAACAACAACGGGTGACT 57.658 45.000 0.00 0.00 0.00 3.41
1700 3052 1.374560 TCAACAACAACGGGTGACTG 58.625 50.000 0.00 0.00 44.60 3.51
1708 3060 2.280797 CGGGTGACTGTGGGTGTG 60.281 66.667 0.00 0.00 0.00 3.82
1709 3061 2.915869 GGGTGACTGTGGGTGTGT 59.084 61.111 0.00 0.00 0.00 3.72
1710 3062 1.750341 CGGGTGACTGTGGGTGTGTA 61.750 60.000 0.00 0.00 0.00 2.90
1711 3063 0.690762 GGGTGACTGTGGGTGTGTAT 59.309 55.000 0.00 0.00 0.00 2.29
1712 3064 1.610624 GGGTGACTGTGGGTGTGTATG 60.611 57.143 0.00 0.00 0.00 2.39
1713 3065 1.610624 GGTGACTGTGGGTGTGTATGG 60.611 57.143 0.00 0.00 0.00 2.74
1714 3066 1.346395 GTGACTGTGGGTGTGTATGGA 59.654 52.381 0.00 0.00 0.00 3.41
1715 3067 1.623311 TGACTGTGGGTGTGTATGGAG 59.377 52.381 0.00 0.00 0.00 3.86
1716 3068 0.324943 ACTGTGGGTGTGTATGGAGC 59.675 55.000 0.00 0.00 0.00 4.70
1717 3069 0.615331 CTGTGGGTGTGTATGGAGCT 59.385 55.000 0.00 0.00 0.00 4.09
1718 3070 0.324614 TGTGGGTGTGTATGGAGCTG 59.675 55.000 0.00 0.00 0.00 4.24
1719 3071 0.324943 GTGGGTGTGTATGGAGCTGT 59.675 55.000 0.00 0.00 0.00 4.40
1720 3072 1.064003 TGGGTGTGTATGGAGCTGTT 58.936 50.000 0.00 0.00 0.00 3.16
1721 3073 1.423541 TGGGTGTGTATGGAGCTGTTT 59.576 47.619 0.00 0.00 0.00 2.83
1722 3074 1.812571 GGGTGTGTATGGAGCTGTTTG 59.187 52.381 0.00 0.00 0.00 2.93
1723 3075 1.812571 GGTGTGTATGGAGCTGTTTGG 59.187 52.381 0.00 0.00 0.00 3.28
1724 3076 2.552155 GGTGTGTATGGAGCTGTTTGGA 60.552 50.000 0.00 0.00 0.00 3.53
1725 3077 3.347216 GTGTGTATGGAGCTGTTTGGAT 58.653 45.455 0.00 0.00 0.00 3.41
1726 3078 3.758554 GTGTGTATGGAGCTGTTTGGATT 59.241 43.478 0.00 0.00 0.00 3.01
1727 3079 4.009675 TGTGTATGGAGCTGTTTGGATTC 58.990 43.478 0.00 0.00 0.00 2.52
1728 3080 3.063997 GTGTATGGAGCTGTTTGGATTCG 59.936 47.826 0.00 0.00 0.00 3.34
1729 3081 1.755179 ATGGAGCTGTTTGGATTCGG 58.245 50.000 0.00 0.00 0.00 4.30
1730 3082 0.960364 TGGAGCTGTTTGGATTCGGC 60.960 55.000 0.00 0.00 36.34 5.54
1731 3083 1.657751 GGAGCTGTTTGGATTCGGCC 61.658 60.000 0.00 0.00 36.71 6.13
1732 3084 1.657751 GAGCTGTTTGGATTCGGCCC 61.658 60.000 0.00 0.00 36.71 5.80
1733 3085 1.678970 GCTGTTTGGATTCGGCCCT 60.679 57.895 0.00 0.00 0.00 5.19
1734 3086 1.937546 GCTGTTTGGATTCGGCCCTG 61.938 60.000 0.00 0.00 0.00 4.45
1735 3087 1.937546 CTGTTTGGATTCGGCCCTGC 61.938 60.000 0.00 0.00 0.00 4.85
1736 3088 1.678970 GTTTGGATTCGGCCCTGCT 60.679 57.895 0.00 0.00 0.00 4.24
1737 3089 0.393808 GTTTGGATTCGGCCCTGCTA 60.394 55.000 0.00 0.00 0.00 3.49
1738 3090 0.107214 TTTGGATTCGGCCCTGCTAG 60.107 55.000 0.00 0.00 0.00 3.42
1739 3091 2.281139 GGATTCGGCCCTGCTAGC 60.281 66.667 8.10 8.10 0.00 3.42
1747 3099 4.424711 CCCTGCTAGCCCGCCAAA 62.425 66.667 13.29 0.00 0.00 3.28
1748 3100 2.124151 CCTGCTAGCCCGCCAAAT 60.124 61.111 13.29 0.00 0.00 2.32
1749 3101 2.189499 CCTGCTAGCCCGCCAAATC 61.189 63.158 13.29 0.00 0.00 2.17
1750 3102 1.451927 CTGCTAGCCCGCCAAATCA 60.452 57.895 13.29 0.00 0.00 2.57
1751 3103 0.820891 CTGCTAGCCCGCCAAATCAT 60.821 55.000 13.29 0.00 0.00 2.45
1752 3104 0.395586 TGCTAGCCCGCCAAATCATT 60.396 50.000 13.29 0.00 0.00 2.57
1753 3105 0.031178 GCTAGCCCGCCAAATCATTG 59.969 55.000 2.29 0.00 36.25 2.82
1776 3128 2.891112 CAAAGTTTTGGCTGCTTGTCA 58.109 42.857 0.00 0.00 34.59 3.58
1777 3129 2.584492 AAGTTTTGGCTGCTTGTCAC 57.416 45.000 0.00 0.00 0.00 3.67
1778 3130 0.746659 AGTTTTGGCTGCTTGTCACC 59.253 50.000 0.00 0.00 0.00 4.02
1779 3131 0.594796 GTTTTGGCTGCTTGTCACCG 60.595 55.000 0.00 0.00 0.00 4.94
1780 3132 0.749818 TTTTGGCTGCTTGTCACCGA 60.750 50.000 0.00 0.00 0.00 4.69
1781 3133 0.749818 TTTGGCTGCTTGTCACCGAA 60.750 50.000 0.00 0.00 0.00 4.30
1782 3134 0.537143 TTGGCTGCTTGTCACCGAAT 60.537 50.000 0.00 0.00 0.00 3.34
1783 3135 0.537143 TGGCTGCTTGTCACCGAATT 60.537 50.000 0.00 0.00 0.00 2.17
1784 3136 1.271108 TGGCTGCTTGTCACCGAATTA 60.271 47.619 0.00 0.00 0.00 1.40
1785 3137 1.130561 GGCTGCTTGTCACCGAATTAC 59.869 52.381 0.00 0.00 0.00 1.89
1786 3138 2.076863 GCTGCTTGTCACCGAATTACT 58.923 47.619 0.00 0.00 0.00 2.24
1787 3139 3.259064 GCTGCTTGTCACCGAATTACTA 58.741 45.455 0.00 0.00 0.00 1.82
1788 3140 3.307242 GCTGCTTGTCACCGAATTACTAG 59.693 47.826 0.00 0.00 0.00 2.57
1789 3141 3.259064 TGCTTGTCACCGAATTACTAGC 58.741 45.455 5.21 5.21 40.74 3.42
1790 3142 3.259064 GCTTGTCACCGAATTACTAGCA 58.741 45.455 6.80 0.00 40.29 3.49
1791 3143 3.871594 GCTTGTCACCGAATTACTAGCAT 59.128 43.478 6.80 0.00 40.29 3.79
1792 3144 4.260375 GCTTGTCACCGAATTACTAGCATG 60.260 45.833 6.80 0.00 40.29 4.06
1793 3145 4.729227 TGTCACCGAATTACTAGCATGA 57.271 40.909 0.00 0.00 0.00 3.07
1794 3146 5.079689 TGTCACCGAATTACTAGCATGAA 57.920 39.130 0.00 0.00 0.00 2.57
1795 3147 5.483811 TGTCACCGAATTACTAGCATGAAA 58.516 37.500 0.00 0.00 0.00 2.69
1796 3148 5.580691 TGTCACCGAATTACTAGCATGAAAG 59.419 40.000 0.00 0.00 0.00 2.62
1797 3149 5.581085 GTCACCGAATTACTAGCATGAAAGT 59.419 40.000 0.00 0.73 0.00 2.66
1798 3150 5.580691 TCACCGAATTACTAGCATGAAAGTG 59.419 40.000 9.87 0.00 0.00 3.16
1799 3151 5.580691 CACCGAATTACTAGCATGAAAGTGA 59.419 40.000 9.87 3.37 0.00 3.41
1800 3152 6.092122 CACCGAATTACTAGCATGAAAGTGAA 59.908 38.462 9.87 2.95 0.00 3.18
1801 3153 6.823689 ACCGAATTACTAGCATGAAAGTGAAT 59.176 34.615 9.87 0.00 0.00 2.57
1802 3154 7.336931 ACCGAATTACTAGCATGAAAGTGAATT 59.663 33.333 9.87 10.56 0.00 2.17
1803 3155 7.641411 CCGAATTACTAGCATGAAAGTGAATTG 59.359 37.037 9.87 1.06 0.00 2.32
1804 3156 7.164826 CGAATTACTAGCATGAAAGTGAATTGC 59.835 37.037 9.87 0.00 0.00 3.56
1805 3157 6.816134 TTACTAGCATGAAAGTGAATTGCA 57.184 33.333 9.87 0.00 35.79 4.08
1806 3158 5.306532 ACTAGCATGAAAGTGAATTGCAG 57.693 39.130 0.00 0.00 35.79 4.41
1807 3159 2.955614 AGCATGAAAGTGAATTGCAGC 58.044 42.857 0.00 0.00 35.79 5.25
1808 3160 1.997606 GCATGAAAGTGAATTGCAGCC 59.002 47.619 0.00 0.00 33.58 4.85
1809 3161 2.610976 GCATGAAAGTGAATTGCAGCCA 60.611 45.455 0.00 0.00 33.58 4.75
1810 3162 2.798976 TGAAAGTGAATTGCAGCCAC 57.201 45.000 6.99 6.99 0.00 5.01
1811 3163 1.340889 TGAAAGTGAATTGCAGCCACC 59.659 47.619 10.33 0.00 0.00 4.61
1812 3164 0.314935 AAAGTGAATTGCAGCCACCG 59.685 50.000 10.33 0.00 0.00 4.94
1813 3165 0.537143 AAGTGAATTGCAGCCACCGA 60.537 50.000 10.33 0.00 0.00 4.69
1814 3166 0.322816 AGTGAATTGCAGCCACCGAT 60.323 50.000 10.33 0.00 0.00 4.18
1815 3167 1.065491 AGTGAATTGCAGCCACCGATA 60.065 47.619 10.33 0.00 0.00 2.92
1816 3168 1.949525 GTGAATTGCAGCCACCGATAT 59.050 47.619 0.00 0.00 0.00 1.63
1817 3169 3.138304 GTGAATTGCAGCCACCGATATA 58.862 45.455 0.00 0.00 0.00 0.86
1818 3170 3.563808 GTGAATTGCAGCCACCGATATAA 59.436 43.478 0.00 0.00 0.00 0.98
1819 3171 3.563808 TGAATTGCAGCCACCGATATAAC 59.436 43.478 0.00 0.00 0.00 1.89
1820 3172 1.961793 TTGCAGCCACCGATATAACC 58.038 50.000 0.00 0.00 0.00 2.85
1821 3173 1.128200 TGCAGCCACCGATATAACCT 58.872 50.000 0.00 0.00 0.00 3.50
1822 3174 1.488812 TGCAGCCACCGATATAACCTT 59.511 47.619 0.00 0.00 0.00 3.50
1823 3175 1.873591 GCAGCCACCGATATAACCTTG 59.126 52.381 0.00 0.00 0.00 3.61
1824 3176 2.494059 CAGCCACCGATATAACCTTGG 58.506 52.381 0.00 0.00 0.00 3.61
1825 3177 1.235724 GCCACCGATATAACCTTGGC 58.764 55.000 4.37 4.37 42.57 4.52
1826 3178 2.631160 CCACCGATATAACCTTGGCA 57.369 50.000 0.00 0.00 0.00 4.92
1827 3179 2.925724 CCACCGATATAACCTTGGCAA 58.074 47.619 0.00 0.00 0.00 4.52
1828 3180 2.878406 CCACCGATATAACCTTGGCAAG 59.122 50.000 20.31 20.31 0.00 4.01
1829 3181 2.290641 CACCGATATAACCTTGGCAAGC 59.709 50.000 21.77 5.27 0.00 4.01
1830 3182 2.172717 ACCGATATAACCTTGGCAAGCT 59.827 45.455 21.77 12.82 0.00 3.74
1831 3183 2.549754 CCGATATAACCTTGGCAAGCTG 59.450 50.000 21.77 11.55 0.00 4.24
1832 3184 3.466836 CGATATAACCTTGGCAAGCTGA 58.533 45.455 21.77 8.54 0.00 4.26
1833 3185 3.876914 CGATATAACCTTGGCAAGCTGAA 59.123 43.478 21.77 6.96 0.00 3.02
1834 3186 4.516698 CGATATAACCTTGGCAAGCTGAAT 59.483 41.667 21.77 13.25 0.00 2.57
1835 3187 5.700832 CGATATAACCTTGGCAAGCTGAATA 59.299 40.000 21.77 14.79 0.00 1.75
1836 3188 6.204688 CGATATAACCTTGGCAAGCTGAATAA 59.795 38.462 21.77 3.83 0.00 1.40
1837 3189 7.094634 CGATATAACCTTGGCAAGCTGAATAAT 60.095 37.037 21.77 8.30 0.00 1.28
1838 3190 4.460948 AACCTTGGCAAGCTGAATAATG 57.539 40.909 21.77 7.22 0.00 1.90
1839 3191 2.167075 ACCTTGGCAAGCTGAATAATGC 59.833 45.455 21.77 0.00 38.06 3.56
1840 3192 2.456989 CTTGGCAAGCTGAATAATGCG 58.543 47.619 15.25 0.00 39.66 4.73
1841 3193 0.101040 TGGCAAGCTGAATAATGCGC 59.899 50.000 0.00 0.00 39.66 6.09
1842 3194 0.383231 GGCAAGCTGAATAATGCGCT 59.617 50.000 9.73 0.00 39.66 5.92
1843 3195 1.598924 GGCAAGCTGAATAATGCGCTC 60.599 52.381 9.73 0.00 39.66 5.03
1844 3196 1.598924 GCAAGCTGAATAATGCGCTCC 60.599 52.381 9.73 0.00 31.30 4.70
1845 3197 1.002033 CAAGCTGAATAATGCGCTCCC 60.002 52.381 9.73 0.00 31.30 4.30
1846 3198 0.181114 AGCTGAATAATGCGCTCCCA 59.819 50.000 9.73 0.00 0.00 4.37
1847 3199 1.202855 AGCTGAATAATGCGCTCCCAT 60.203 47.619 9.73 0.00 0.00 4.00
1848 3200 1.198637 GCTGAATAATGCGCTCCCATC 59.801 52.381 9.73 2.37 0.00 3.51
1849 3201 1.808945 CTGAATAATGCGCTCCCATCC 59.191 52.381 9.73 0.00 0.00 3.51
1850 3202 1.142667 TGAATAATGCGCTCCCATCCA 59.857 47.619 9.73 0.00 0.00 3.41
1851 3203 2.229792 GAATAATGCGCTCCCATCCAA 58.770 47.619 9.73 0.00 0.00 3.53
1852 3204 2.363306 ATAATGCGCTCCCATCCAAA 57.637 45.000 9.73 0.00 0.00 3.28
1853 3205 1.388547 TAATGCGCTCCCATCCAAAC 58.611 50.000 9.73 0.00 0.00 2.93
1854 3206 0.611618 AATGCGCTCCCATCCAAACA 60.612 50.000 9.73 0.00 0.00 2.83
1855 3207 0.611618 ATGCGCTCCCATCCAAACAA 60.612 50.000 9.73 0.00 0.00 2.83
1856 3208 0.825425 TGCGCTCCCATCCAAACAAA 60.825 50.000 9.73 0.00 0.00 2.83
1857 3209 0.532115 GCGCTCCCATCCAAACAAAT 59.468 50.000 0.00 0.00 0.00 2.32
1858 3210 1.736696 GCGCTCCCATCCAAACAAATG 60.737 52.381 0.00 0.00 0.00 2.32
1859 3211 1.736696 CGCTCCCATCCAAACAAATGC 60.737 52.381 0.00 0.00 0.00 3.56
1860 3212 1.275856 GCTCCCATCCAAACAAATGCA 59.724 47.619 0.00 0.00 0.00 3.96
1861 3213 2.932187 GCTCCCATCCAAACAAATGCAC 60.932 50.000 0.00 0.00 0.00 4.57
1862 3214 1.271934 TCCCATCCAAACAAATGCACG 59.728 47.619 0.00 0.00 0.00 5.34
1863 3215 1.271934 CCCATCCAAACAAATGCACGA 59.728 47.619 0.00 0.00 0.00 4.35
1864 3216 2.094078 CCCATCCAAACAAATGCACGAT 60.094 45.455 0.00 0.00 0.00 3.73
1865 3217 3.130164 CCCATCCAAACAAATGCACGATA 59.870 43.478 0.00 0.00 0.00 2.92
1866 3218 4.353737 CCATCCAAACAAATGCACGATAG 58.646 43.478 0.00 0.00 46.19 2.08
1890 3242 8.114331 AGTCAACATTTCTTATTTCATCTGCA 57.886 30.769 0.00 0.00 0.00 4.41
1891 3243 8.746530 AGTCAACATTTCTTATTTCATCTGCAT 58.253 29.630 0.00 0.00 0.00 3.96
1892 3244 9.362539 GTCAACATTTCTTATTTCATCTGCATT 57.637 29.630 0.00 0.00 0.00 3.56
1899 3251 9.874205 TTTCTTATTTCATCTGCATTAAAAGGG 57.126 29.630 0.00 0.00 0.00 3.95
1900 3252 8.010733 TCTTATTTCATCTGCATTAAAAGGGG 57.989 34.615 0.00 0.00 0.00 4.79
1901 3253 7.838696 TCTTATTTCATCTGCATTAAAAGGGGA 59.161 33.333 0.00 0.00 0.00 4.81
1902 3254 5.659440 TTTCATCTGCATTAAAAGGGGAC 57.341 39.130 0.00 0.00 0.00 4.46
1903 3255 4.314522 TCATCTGCATTAAAAGGGGACA 57.685 40.909 0.00 0.00 0.00 4.02
1904 3256 4.671831 TCATCTGCATTAAAAGGGGACAA 58.328 39.130 0.00 0.00 0.00 3.18
1905 3257 4.462483 TCATCTGCATTAAAAGGGGACAAC 59.538 41.667 0.00 0.00 0.00 3.32
1906 3258 3.838565 TCTGCATTAAAAGGGGACAACA 58.161 40.909 0.00 0.00 0.00 3.33
1907 3259 4.415596 TCTGCATTAAAAGGGGACAACAT 58.584 39.130 0.00 0.00 0.00 2.71
1908 3260 4.220382 TCTGCATTAAAAGGGGACAACATG 59.780 41.667 0.00 0.00 0.00 3.21
1909 3261 3.900601 TGCATTAAAAGGGGACAACATGT 59.099 39.130 0.00 0.00 0.00 3.21
1910 3262 5.080337 TGCATTAAAAGGGGACAACATGTA 58.920 37.500 0.00 0.00 0.00 2.29
1911 3263 5.719085 TGCATTAAAAGGGGACAACATGTAT 59.281 36.000 0.00 0.00 0.00 2.29
1912 3264 6.042143 GCATTAAAAGGGGACAACATGTATG 58.958 40.000 0.00 2.55 0.00 2.39
1913 3265 6.350949 GCATTAAAAGGGGACAACATGTATGT 60.351 38.462 0.00 6.07 44.20 2.29
1914 3266 6.827586 TTAAAAGGGGACAACATGTATGTC 57.172 37.500 22.44 22.44 45.08 3.06
1926 3278 9.979270 GACAACATGTATGTCATCTTCTTTAAG 57.021 33.333 24.17 0.00 45.13 1.85
1927 3279 9.725019 ACAACATGTATGTCATCTTCTTTAAGA 57.275 29.630 0.00 0.00 42.17 2.10
1929 3281 8.954950 ACATGTATGTCATCTTCTTTAAGAGG 57.045 34.615 0.00 0.00 43.34 3.69
1930 3282 8.543774 ACATGTATGTCATCTTCTTTAAGAGGT 58.456 33.333 0.00 0.00 42.71 3.85
1931 3283 9.388506 CATGTATGTCATCTTCTTTAAGAGGTT 57.611 33.333 4.07 0.00 44.79 3.50
1936 3288 9.793259 ATGTCATCTTCTTTAAGAGGTTAACAA 57.207 29.630 8.10 0.00 44.79 2.83
1937 3289 9.621629 TGTCATCTTCTTTAAGAGGTTAACAAA 57.378 29.630 8.10 0.00 44.79 2.83
1942 3294 8.357402 TCTTCTTTAAGAGGTTAACAAAATGGC 58.643 33.333 8.10 0.00 36.80 4.40
1943 3295 7.589958 TCTTTAAGAGGTTAACAAAATGGCA 57.410 32.000 8.10 0.00 0.00 4.92
1944 3296 7.657336 TCTTTAAGAGGTTAACAAAATGGCAG 58.343 34.615 8.10 0.00 0.00 4.85
1945 3297 4.871933 AAGAGGTTAACAAAATGGCAGG 57.128 40.909 8.10 0.00 0.00 4.85
1946 3298 2.562738 AGAGGTTAACAAAATGGCAGGC 59.437 45.455 8.10 0.00 0.00 4.85
1947 3299 1.623311 AGGTTAACAAAATGGCAGGCC 59.377 47.619 8.10 2.62 0.00 5.19
1948 3300 1.671556 GGTTAACAAAATGGCAGGCCG 60.672 52.381 8.10 0.00 39.42 6.13
1949 3301 1.271102 GTTAACAAAATGGCAGGCCGA 59.729 47.619 5.74 0.00 39.42 5.54
1950 3302 1.621992 TAACAAAATGGCAGGCCGAA 58.378 45.000 5.74 0.00 39.42 4.30
1951 3303 0.975887 AACAAAATGGCAGGCCGAAT 59.024 45.000 5.74 0.00 39.42 3.34
1952 3304 0.975887 ACAAAATGGCAGGCCGAATT 59.024 45.000 5.74 0.00 39.42 2.17
1953 3305 2.175202 ACAAAATGGCAGGCCGAATTA 58.825 42.857 5.74 0.00 39.42 1.40
1954 3306 2.765699 ACAAAATGGCAGGCCGAATTAT 59.234 40.909 5.74 0.00 39.42 1.28
1955 3307 3.125316 CAAAATGGCAGGCCGAATTATG 58.875 45.455 5.74 0.00 39.42 1.90
1956 3308 2.071778 AATGGCAGGCCGAATTATGT 57.928 45.000 5.74 0.00 39.42 2.29
1957 3309 2.071778 ATGGCAGGCCGAATTATGTT 57.928 45.000 5.74 0.00 39.42 2.71
1958 3310 1.846007 TGGCAGGCCGAATTATGTTT 58.154 45.000 5.74 0.00 39.42 2.83
1959 3311 3.006112 TGGCAGGCCGAATTATGTTTA 57.994 42.857 5.74 0.00 39.42 2.01
1960 3312 3.561143 TGGCAGGCCGAATTATGTTTAT 58.439 40.909 5.74 0.00 39.42 1.40
1961 3313 4.720046 TGGCAGGCCGAATTATGTTTATA 58.280 39.130 5.74 0.00 39.42 0.98
1962 3314 5.133941 TGGCAGGCCGAATTATGTTTATAA 58.866 37.500 5.74 0.00 39.42 0.98
2044 3396 4.978099 ACTCAACAACCATCACTCAAGAT 58.022 39.130 0.00 0.00 0.00 2.40
2079 3431 2.418628 TCTCCTTTATTTTTGCGAGGCG 59.581 45.455 0.00 0.00 0.00 5.52
2086 3438 6.293190 CCTTTATTTTTGCGAGGCGTCATATA 60.293 38.462 7.26 0.00 0.00 0.86
2094 3446 3.381045 CGAGGCGTCATATATGTGTTGT 58.619 45.455 12.42 0.00 0.00 3.32
2110 3465 2.766263 TGTTGTCGCTTATCCTCCTCAT 59.234 45.455 0.00 0.00 0.00 2.90
2125 3480 1.738346 CTCATCCTCGCCGGTGATGA 61.738 60.000 22.73 22.73 41.80 2.92
2207 3564 1.221635 CTCTCTCCCTCTCTCCTCCA 58.778 60.000 0.00 0.00 0.00 3.86
2313 3680 6.370166 TGCATGTGTAGTTATCGATGTTTTCA 59.630 34.615 8.54 0.00 0.00 2.69
2335 3702 8.542497 TTCATTTCCGTATATGGTTATAGTGC 57.458 34.615 10.85 0.00 0.00 4.40
2372 3740 2.430921 GATCGCCGCCGGTATGAG 60.431 66.667 4.45 0.00 34.56 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 28 1.625511 ACTTCCGAAACCCGACTACT 58.374 50.000 0.00 0.00 41.76 2.57
26 29 2.445565 AACTTCCGAAACCCGACTAC 57.554 50.000 0.00 0.00 41.76 2.73
33 36 6.895607 TTTGAATTTCAAACTTCCGAAACC 57.104 33.333 18.29 0.00 41.02 3.27
62 65 7.114247 ACACGAACATGATTTAAATTTGAACCG 59.886 33.333 15.20 15.04 0.00 4.44
107 125 4.788925 TCTAATTCCCATCAATCCCGTT 57.211 40.909 0.00 0.00 0.00 4.44
113 131 4.891756 CCTGCTGTTCTAATTCCCATCAAT 59.108 41.667 0.00 0.00 0.00 2.57
115 133 3.371917 CCCTGCTGTTCTAATTCCCATCA 60.372 47.826 0.00 0.00 0.00 3.07
120 138 3.117888 TCCATCCCTGCTGTTCTAATTCC 60.118 47.826 0.00 0.00 0.00 3.01
121 139 3.879892 GTCCATCCCTGCTGTTCTAATTC 59.120 47.826 0.00 0.00 0.00 2.17
123 141 2.158900 CGTCCATCCCTGCTGTTCTAAT 60.159 50.000 0.00 0.00 0.00 1.73
125 143 0.824109 CGTCCATCCCTGCTGTTCTA 59.176 55.000 0.00 0.00 0.00 2.10
126 144 0.904865 TCGTCCATCCCTGCTGTTCT 60.905 55.000 0.00 0.00 0.00 3.01
127 145 0.460987 CTCGTCCATCCCTGCTGTTC 60.461 60.000 0.00 0.00 0.00 3.18
129 147 2.362369 CCTCGTCCATCCCTGCTGT 61.362 63.158 0.00 0.00 0.00 4.40
130 148 1.406065 ATCCTCGTCCATCCCTGCTG 61.406 60.000 0.00 0.00 0.00 4.41
131 149 0.692419 AATCCTCGTCCATCCCTGCT 60.692 55.000 0.00 0.00 0.00 4.24
132 150 0.181350 AAATCCTCGTCCATCCCTGC 59.819 55.000 0.00 0.00 0.00 4.85
133 151 1.486310 TCAAATCCTCGTCCATCCCTG 59.514 52.381 0.00 0.00 0.00 4.45
166 184 1.272490 TCTCCACCATTGACTCGTGAC 59.728 52.381 0.00 0.00 0.00 3.67
181 199 0.035725 CATCACTTGCAGCCTCTCCA 60.036 55.000 0.00 0.00 0.00 3.86
190 208 1.271325 ACGTCCCAATCATCACTTGCA 60.271 47.619 0.00 0.00 0.00 4.08
192 210 1.739466 CCACGTCCCAATCATCACTTG 59.261 52.381 0.00 0.00 0.00 3.16
213 231 1.588674 GAACATGGACACGGACACAA 58.411 50.000 0.00 0.00 0.00 3.33
227 251 3.351740 TGATGGGCACATAAACGAACAT 58.648 40.909 0.00 0.00 37.47 2.71
231 255 1.742831 GCTTGATGGGCACATAAACGA 59.257 47.619 0.00 0.00 37.47 3.85
256 280 0.535335 ATGACGGGCACTACAATCGT 59.465 50.000 0.00 0.00 36.74 3.73
297 321 9.335891 CATTTTGTCATTGTTAACTTGCGTATA 57.664 29.630 7.22 0.00 0.00 1.47
301 325 6.509317 ACATTTTGTCATTGTTAACTTGCG 57.491 33.333 7.22 0.00 0.00 4.85
323 347 4.683129 GCATTTGGAAATAACCCCCATGAC 60.683 45.833 0.00 0.00 0.00 3.06
338 363 9.466497 ACATCTTAGAAGATAAAAGCATTTGGA 57.534 29.630 4.47 0.00 43.65 3.53
375 400 6.097129 TCCCCACGAAACTCTTTGTTAATTTT 59.903 34.615 0.00 0.00 38.03 1.82
381 406 2.294979 GTCCCCACGAAACTCTTTGTT 58.705 47.619 0.00 0.00 41.29 2.83
394 419 2.430248 AATTTACCCATCGTCCCCAC 57.570 50.000 0.00 0.00 0.00 4.61
397 422 4.096833 GTGGTTAAATTTACCCATCGTCCC 59.903 45.833 16.53 0.70 34.66 4.46
398 423 4.201841 CGTGGTTAAATTTACCCATCGTCC 60.202 45.833 16.53 3.99 34.66 4.79
400 425 3.690628 CCGTGGTTAAATTTACCCATCGT 59.309 43.478 16.53 0.00 34.66 3.73
401 426 3.940221 TCCGTGGTTAAATTTACCCATCG 59.060 43.478 16.53 18.56 34.66 3.84
415 1592 3.417069 TCAGACAAATGATCCGTGGTT 57.583 42.857 0.00 0.00 0.00 3.67
422 1599 5.582269 TGTCGATTCCTTCAGACAAATGATC 59.418 40.000 0.00 0.00 40.19 2.92
432 1609 2.363788 TCCGTTGTCGATTCCTTCAG 57.636 50.000 0.00 0.00 39.71 3.02
435 1612 2.233922 AGTCATCCGTTGTCGATTCCTT 59.766 45.455 0.00 0.00 39.71 3.36
436 1613 1.825474 AGTCATCCGTTGTCGATTCCT 59.175 47.619 0.00 0.00 39.71 3.36
437 1614 1.927174 CAGTCATCCGTTGTCGATTCC 59.073 52.381 0.00 0.00 39.71 3.01
438 1615 2.345641 CACAGTCATCCGTTGTCGATTC 59.654 50.000 0.00 0.00 39.71 2.52
439 1616 2.337583 CACAGTCATCCGTTGTCGATT 58.662 47.619 0.00 0.00 39.71 3.34
441 1618 0.038618 CCACAGTCATCCGTTGTCGA 60.039 55.000 0.00 0.00 39.71 4.20
442 1619 1.014044 CCCACAGTCATCCGTTGTCG 61.014 60.000 0.00 0.00 0.00 4.35
443 1620 0.034896 ACCCACAGTCATCCGTTGTC 59.965 55.000 0.00 0.00 0.00 3.18
444 1621 1.344065 TACCCACAGTCATCCGTTGT 58.656 50.000 0.00 0.00 0.00 3.32
451 1629 3.071602 GCTCCATACATACCCACAGTCAT 59.928 47.826 0.00 0.00 0.00 3.06
463 1641 6.109359 GCCGAATCTAAATAGCTCCATACAT 58.891 40.000 0.00 0.00 0.00 2.29
469 1647 2.615747 GGGGCCGAATCTAAATAGCTCC 60.616 54.545 0.00 0.00 32.89 4.70
475 1653 0.846693 AGCAGGGGCCGAATCTAAAT 59.153 50.000 0.00 0.00 42.56 1.40
479 1657 2.812619 GCTAGCAGGGGCCGAATCT 61.813 63.158 10.63 0.00 42.56 2.40
560 1738 3.742369 GGTGGTTGCAATTCACTTTCATG 59.258 43.478 24.84 0.00 0.00 3.07
561 1739 3.387374 TGGTGGTTGCAATTCACTTTCAT 59.613 39.130 24.84 0.00 0.00 2.57
562 1740 2.762887 TGGTGGTTGCAATTCACTTTCA 59.237 40.909 24.84 16.51 0.00 2.69
563 1741 3.451141 TGGTGGTTGCAATTCACTTTC 57.549 42.857 24.84 14.84 0.00 2.62
564 1742 3.902881 TTGGTGGTTGCAATTCACTTT 57.097 38.095 24.84 0.00 0.00 2.66
565 1743 3.902881 TTTGGTGGTTGCAATTCACTT 57.097 38.095 24.84 0.00 0.00 3.16
566 1744 3.055530 TGTTTTGGTGGTTGCAATTCACT 60.056 39.130 24.84 0.00 0.00 3.41
567 1745 3.265791 TGTTTTGGTGGTTGCAATTCAC 58.734 40.909 20.65 20.65 0.00 3.18
568 1746 3.616956 TGTTTTGGTGGTTGCAATTCA 57.383 38.095 0.59 1.43 0.00 2.57
569 1747 4.954092 TTTGTTTTGGTGGTTGCAATTC 57.046 36.364 0.59 0.00 0.00 2.17
570 1748 4.439837 GCATTTGTTTTGGTGGTTGCAATT 60.440 37.500 0.59 0.00 0.00 2.32
571 1749 3.066481 GCATTTGTTTTGGTGGTTGCAAT 59.934 39.130 0.59 0.00 0.00 3.56
572 1750 2.421424 GCATTTGTTTTGGTGGTTGCAA 59.579 40.909 0.00 0.00 0.00 4.08
573 1751 2.012673 GCATTTGTTTTGGTGGTTGCA 58.987 42.857 0.00 0.00 0.00 4.08
574 1752 2.012673 TGCATTTGTTTTGGTGGTTGC 58.987 42.857 0.00 0.00 0.00 4.17
575 1753 3.005554 TGTGCATTTGTTTTGGTGGTTG 58.994 40.909 0.00 0.00 0.00 3.77
576 1754 3.340814 TGTGCATTTGTTTTGGTGGTT 57.659 38.095 0.00 0.00 0.00 3.67
577 1755 3.340814 TTGTGCATTTGTTTTGGTGGT 57.659 38.095 0.00 0.00 0.00 4.16
578 1756 5.055812 ACTATTGTGCATTTGTTTTGGTGG 58.944 37.500 0.00 0.00 0.00 4.61
579 1757 5.752472 TGACTATTGTGCATTTGTTTTGGTG 59.248 36.000 0.00 0.00 0.00 4.17
580 1758 5.911752 TGACTATTGTGCATTTGTTTTGGT 58.088 33.333 0.00 0.00 0.00 3.67
581 1759 6.257411 TGTTGACTATTGTGCATTTGTTTTGG 59.743 34.615 0.00 0.00 0.00 3.28
582 1760 7.231705 TGTTGACTATTGTGCATTTGTTTTG 57.768 32.000 0.00 0.00 0.00 2.44
583 1761 8.436046 AATGTTGACTATTGTGCATTTGTTTT 57.564 26.923 0.00 0.00 0.00 2.43
584 1762 8.436046 AAATGTTGACTATTGTGCATTTGTTT 57.564 26.923 0.00 0.00 35.88 2.83
585 1763 7.927629 AGAAATGTTGACTATTGTGCATTTGTT 59.072 29.630 14.03 5.13 36.89 2.83
586 1764 7.436118 AGAAATGTTGACTATTGTGCATTTGT 58.564 30.769 14.03 9.94 36.89 2.83
587 1765 7.878477 AGAAATGTTGACTATTGTGCATTTG 57.122 32.000 14.03 0.00 36.89 2.32
598 1776 9.952030 TGTGGATGTAATAAGAAATGTTGACTA 57.048 29.630 0.00 0.00 0.00 2.59
599 1777 8.862325 TGTGGATGTAATAAGAAATGTTGACT 57.138 30.769 0.00 0.00 0.00 3.41
608 1786 9.196139 CCCCTTTTAATGTGGATGTAATAAGAA 57.804 33.333 0.00 0.00 0.00 2.52
609 1787 8.561769 TCCCCTTTTAATGTGGATGTAATAAGA 58.438 33.333 0.00 0.00 0.00 2.10
610 1788 8.630037 GTCCCCTTTTAATGTGGATGTAATAAG 58.370 37.037 0.00 0.00 0.00 1.73
611 1789 8.116669 TGTCCCCTTTTAATGTGGATGTAATAA 58.883 33.333 0.00 0.00 0.00 1.40
612 1790 7.644062 TGTCCCCTTTTAATGTGGATGTAATA 58.356 34.615 0.00 0.00 0.00 0.98
613 1791 6.498538 TGTCCCCTTTTAATGTGGATGTAAT 58.501 36.000 0.00 0.00 0.00 1.89
614 1792 5.893500 TGTCCCCTTTTAATGTGGATGTAA 58.106 37.500 0.00 0.00 0.00 2.41
615 1793 5.522315 TGTCCCCTTTTAATGTGGATGTA 57.478 39.130 0.00 0.00 0.00 2.29
616 1794 4.396357 TGTCCCCTTTTAATGTGGATGT 57.604 40.909 0.00 0.00 0.00 3.06
617 1795 4.526262 TGTTGTCCCCTTTTAATGTGGATG 59.474 41.667 0.00 0.00 0.00 3.51
618 1796 4.746466 TGTTGTCCCCTTTTAATGTGGAT 58.254 39.130 0.00 0.00 0.00 3.41
619 1797 4.186077 TGTTGTCCCCTTTTAATGTGGA 57.814 40.909 0.00 0.00 0.00 4.02
620 1798 4.819769 CATGTTGTCCCCTTTTAATGTGG 58.180 43.478 0.00 0.00 0.00 4.17
621 1799 4.244862 GCATGTTGTCCCCTTTTAATGTG 58.755 43.478 0.00 0.00 0.00 3.21
622 1800 3.056891 CGCATGTTGTCCCCTTTTAATGT 60.057 43.478 0.00 0.00 0.00 2.71
623 1801 3.056891 ACGCATGTTGTCCCCTTTTAATG 60.057 43.478 0.00 0.00 0.00 1.90
624 1802 3.161866 ACGCATGTTGTCCCCTTTTAAT 58.838 40.909 0.00 0.00 0.00 1.40
625 1803 2.588620 ACGCATGTTGTCCCCTTTTAA 58.411 42.857 0.00 0.00 0.00 1.52
626 1804 2.279935 ACGCATGTTGTCCCCTTTTA 57.720 45.000 0.00 0.00 0.00 1.52
627 1805 1.408969 AACGCATGTTGTCCCCTTTT 58.591 45.000 0.00 0.00 36.81 2.27
628 1806 3.125520 AACGCATGTTGTCCCCTTT 57.874 47.368 0.00 0.00 36.81 3.11
629 1807 4.920828 AACGCATGTTGTCCCCTT 57.079 50.000 0.00 0.00 36.81 3.95
637 1815 1.675641 GAGGAGGGCAACGCATGTT 60.676 57.895 0.00 0.00 39.43 2.71
638 1816 2.045926 GAGGAGGGCAACGCATGT 60.046 61.111 0.00 0.00 37.60 3.21
639 1817 2.110967 CAGAGGAGGGCAACGCATG 61.111 63.158 0.00 0.00 37.60 4.06
640 1818 2.270205 CAGAGGAGGGCAACGCAT 59.730 61.111 0.00 0.00 37.60 4.73
641 1819 4.020617 CCAGAGGAGGGCAACGCA 62.021 66.667 0.00 0.00 37.60 5.24
699 1877 4.779733 GGCGAGGGAGGAGGTGGA 62.780 72.222 0.00 0.00 0.00 4.02
773 1951 0.105913 AAAGGAAAGGAAACGCCCCA 60.106 50.000 0.00 0.00 37.37 4.96
871 2049 4.671590 TCCCCGTGAGCCGTCTGA 62.672 66.667 0.00 0.00 33.66 3.27
872 2050 4.135153 CTCCCCGTGAGCCGTCTG 62.135 72.222 0.00 0.00 33.47 3.51
940 2135 1.739750 CCAGATTAGGCCCTCTCCAT 58.260 55.000 0.00 0.00 0.00 3.41
953 2148 1.535685 GGATCCAGCAGCCCAGATT 59.464 57.895 6.95 0.00 0.00 2.40
1121 2377 2.214216 CCGACCCACTTCCACCTCA 61.214 63.158 0.00 0.00 0.00 3.86
1198 2455 2.180769 CACGCACTAGGCACGCTA 59.819 61.111 0.00 0.00 45.17 4.26
1202 2459 1.209275 CGATAGCACGCACTAGGCAC 61.209 60.000 0.00 0.00 45.17 5.01
1208 2465 1.433879 GAGGACGATAGCACGCACT 59.566 57.895 0.00 0.00 42.67 4.40
1252 2510 3.948702 TCCGCTCGGATTGGATCA 58.051 55.556 6.95 0.00 39.76 2.92
1354 2702 0.783206 TCATGGAACCCAACACCCAT 59.217 50.000 0.00 0.00 39.80 4.00
1359 2707 2.109834 ACCAAGATCATGGAACCCAACA 59.890 45.455 23.35 0.00 43.54 3.33
1361 2709 2.378208 TGACCAAGATCATGGAACCCAA 59.622 45.455 23.35 0.00 43.54 4.12
1408 2756 0.919873 CACGAGCGTCACTATCGTCG 60.920 60.000 1.49 0.00 45.92 5.12
1412 2760 1.589196 GCCCACGAGCGTCACTATC 60.589 63.158 0.00 0.00 0.00 2.08
1414 2762 2.986979 TGCCCACGAGCGTCACTA 60.987 61.111 0.00 0.00 34.65 2.74
1415 2763 4.664677 GTGCCCACGAGCGTCACT 62.665 66.667 6.21 0.00 34.65 3.41
1423 2771 3.524648 GAAGGAACGGTGCCCACGA 62.525 63.158 0.09 0.00 34.93 4.35
1431 2779 1.918800 CCTCCAGGGAAGGAACGGT 60.919 63.158 0.00 0.00 37.20 4.83
1439 2787 0.106419 AAAACAACGCCTCCAGGGAA 60.106 50.000 0.00 0.00 37.23 3.97
1548 2899 2.011222 ACAAGACGACGCCTTCAAAAA 58.989 42.857 0.00 0.00 0.00 1.94
1560 2912 0.241213 CTCCTCGAGCAACAAGACGA 59.759 55.000 6.99 0.00 0.00 4.20
1596 2948 9.543018 GTCATTTTTCTAACGAAAACATCCTAG 57.457 33.333 0.00 0.00 45.87 3.02
1597 2949 9.058174 TGTCATTTTTCTAACGAAAACATCCTA 57.942 29.630 0.00 0.00 45.87 2.94
1598 2950 7.936584 TGTCATTTTTCTAACGAAAACATCCT 58.063 30.769 0.00 0.00 45.87 3.24
1599 2951 8.568732 TTGTCATTTTTCTAACGAAAACATCC 57.431 30.769 0.00 0.00 45.87 3.51
1601 2953 9.796120 TCTTTGTCATTTTTCTAACGAAAACAT 57.204 25.926 0.00 0.00 45.87 2.71
1602 2954 9.796120 ATCTTTGTCATTTTTCTAACGAAAACA 57.204 25.926 0.00 0.00 45.87 2.83
1611 2963 9.709495 CCCATGAAAATCTTTGTCATTTTTCTA 57.291 29.630 0.00 0.00 38.36 2.10
1612 2964 7.662669 CCCCATGAAAATCTTTGTCATTTTTCT 59.337 33.333 0.00 0.00 38.36 2.52
1613 2965 7.094677 CCCCCATGAAAATCTTTGTCATTTTTC 60.095 37.037 0.00 0.00 38.14 2.29
1614 2966 6.716173 CCCCCATGAAAATCTTTGTCATTTTT 59.284 34.615 0.00 0.00 34.30 1.94
1615 2967 6.240145 CCCCCATGAAAATCTTTGTCATTTT 58.760 36.000 0.00 0.00 36.38 1.82
1616 2968 5.804120 GCCCCCATGAAAATCTTTGTCATTT 60.804 40.000 0.00 0.00 29.49 2.32
1617 2969 4.323715 GCCCCCATGAAAATCTTTGTCATT 60.324 41.667 0.00 0.00 29.49 2.57
1618 2970 3.198417 GCCCCCATGAAAATCTTTGTCAT 59.802 43.478 0.00 0.00 32.17 3.06
1619 2971 2.566724 GCCCCCATGAAAATCTTTGTCA 59.433 45.455 0.00 0.00 0.00 3.58
1620 2972 2.417243 CGCCCCCATGAAAATCTTTGTC 60.417 50.000 0.00 0.00 0.00 3.18
1621 2973 1.550072 CGCCCCCATGAAAATCTTTGT 59.450 47.619 0.00 0.00 0.00 2.83
1622 2974 1.824230 TCGCCCCCATGAAAATCTTTG 59.176 47.619 0.00 0.00 0.00 2.77
1623 2975 2.230130 TCGCCCCCATGAAAATCTTT 57.770 45.000 0.00 0.00 0.00 2.52
1624 2976 2.034124 CATCGCCCCCATGAAAATCTT 58.966 47.619 0.00 0.00 0.00 2.40
1625 2977 1.696063 CATCGCCCCCATGAAAATCT 58.304 50.000 0.00 0.00 0.00 2.40
1626 2978 0.675633 CCATCGCCCCCATGAAAATC 59.324 55.000 0.00 0.00 0.00 2.17
1627 2979 0.760189 CCCATCGCCCCCATGAAAAT 60.760 55.000 0.00 0.00 0.00 1.82
1628 2980 1.381056 CCCATCGCCCCCATGAAAA 60.381 57.895 0.00 0.00 0.00 2.29
1629 2981 1.282653 TACCCATCGCCCCCATGAAA 61.283 55.000 0.00 0.00 0.00 2.69
1630 2982 1.065410 ATACCCATCGCCCCCATGAA 61.065 55.000 0.00 0.00 0.00 2.57
1631 2983 0.178888 TATACCCATCGCCCCCATGA 60.179 55.000 0.00 0.00 0.00 3.07
1632 2984 0.918983 ATATACCCATCGCCCCCATG 59.081 55.000 0.00 0.00 0.00 3.66
1633 2985 1.564348 GAATATACCCATCGCCCCCAT 59.436 52.381 0.00 0.00 0.00 4.00
1634 2986 0.988832 GAATATACCCATCGCCCCCA 59.011 55.000 0.00 0.00 0.00 4.96
1635 2987 0.988832 TGAATATACCCATCGCCCCC 59.011 55.000 0.00 0.00 0.00 5.40
1636 2988 1.339727 GGTGAATATACCCATCGCCCC 60.340 57.143 0.00 0.00 37.70 5.80
1637 2989 1.349688 TGGTGAATATACCCATCGCCC 59.650 52.381 2.47 0.00 41.90 6.13
1638 2990 2.423577 GTGGTGAATATACCCATCGCC 58.576 52.381 0.00 0.00 42.70 5.54
1639 2991 2.423577 GGTGGTGAATATACCCATCGC 58.576 52.381 0.00 0.00 40.09 4.58
1640 2992 2.683968 CGGTGGTGAATATACCCATCG 58.316 52.381 6.52 6.52 45.34 3.84
1641 2993 4.553330 ATCGGTGGTGAATATACCCATC 57.447 45.455 0.00 0.00 40.09 3.51
1642 2994 4.993705 AATCGGTGGTGAATATACCCAT 57.006 40.909 0.00 0.00 40.09 4.00
1643 2995 6.442541 AATAATCGGTGGTGAATATACCCA 57.557 37.500 0.00 0.00 40.09 4.51
1644 2996 6.713450 ACAAATAATCGGTGGTGAATATACCC 59.287 38.462 0.00 0.00 40.09 3.69
1645 2997 7.739498 ACAAATAATCGGTGGTGAATATACC 57.261 36.000 0.00 0.00 41.24 2.73
1646 2998 9.445786 CAAACAAATAATCGGTGGTGAATATAC 57.554 33.333 0.00 0.00 0.00 1.47
1647 2999 9.179909 ACAAACAAATAATCGGTGGTGAATATA 57.820 29.630 0.00 0.00 0.00 0.86
1648 3000 7.973388 CACAAACAAATAATCGGTGGTGAATAT 59.027 33.333 0.00 0.00 0.00 1.28
1649 3001 7.175119 TCACAAACAAATAATCGGTGGTGAATA 59.825 33.333 0.00 0.00 31.19 1.75
1650 3002 6.015856 TCACAAACAAATAATCGGTGGTGAAT 60.016 34.615 0.00 0.00 31.19 2.57
1651 3003 5.299531 TCACAAACAAATAATCGGTGGTGAA 59.700 36.000 0.00 0.00 31.19 3.18
1652 3004 4.822350 TCACAAACAAATAATCGGTGGTGA 59.178 37.500 0.00 0.00 31.46 4.02
1653 3005 5.114785 TCACAAACAAATAATCGGTGGTG 57.885 39.130 0.00 0.00 0.00 4.17
1654 3006 5.278758 CCTTCACAAACAAATAATCGGTGGT 60.279 40.000 0.00 0.00 0.00 4.16
1655 3007 5.048364 TCCTTCACAAACAAATAATCGGTGG 60.048 40.000 0.00 0.00 0.00 4.61
1656 3008 6.007936 TCCTTCACAAACAAATAATCGGTG 57.992 37.500 0.00 0.00 0.00 4.94
1657 3009 6.642707 TTCCTTCACAAACAAATAATCGGT 57.357 33.333 0.00 0.00 0.00 4.69
1658 3010 7.312154 TGATTCCTTCACAAACAAATAATCGG 58.688 34.615 0.00 0.00 0.00 4.18
1659 3011 8.638565 GTTGATTCCTTCACAAACAAATAATCG 58.361 33.333 0.00 0.00 32.84 3.34
1660 3012 9.474920 TGTTGATTCCTTCACAAACAAATAATC 57.525 29.630 0.00 0.00 32.84 1.75
1661 3013 9.829507 TTGTTGATTCCTTCACAAACAAATAAT 57.170 25.926 0.00 0.00 32.84 1.28
1662 3014 9.092876 GTTGTTGATTCCTTCACAAACAAATAA 57.907 29.630 0.00 0.00 33.24 1.40
1663 3015 8.253810 TGTTGTTGATTCCTTCACAAACAAATA 58.746 29.630 0.00 0.00 37.15 1.40
1664 3016 7.102346 TGTTGTTGATTCCTTCACAAACAAAT 58.898 30.769 0.00 0.00 37.15 2.32
1665 3017 6.459066 TGTTGTTGATTCCTTCACAAACAAA 58.541 32.000 0.00 0.00 37.15 2.83
1666 3018 6.030548 TGTTGTTGATTCCTTCACAAACAA 57.969 33.333 0.00 0.00 37.15 2.83
1667 3019 5.651387 TGTTGTTGATTCCTTCACAAACA 57.349 34.783 0.00 0.00 37.48 2.83
1668 3020 5.004345 CGTTGTTGTTGATTCCTTCACAAAC 59.996 40.000 0.00 0.00 32.84 2.93
1669 3021 5.098893 CGTTGTTGTTGATTCCTTCACAAA 58.901 37.500 0.00 0.00 32.84 2.83
1670 3022 4.439426 CCGTTGTTGTTGATTCCTTCACAA 60.439 41.667 0.00 0.00 32.84 3.33
1671 3023 3.066064 CCGTTGTTGTTGATTCCTTCACA 59.934 43.478 0.00 0.00 32.84 3.58
1672 3024 3.550030 CCCGTTGTTGTTGATTCCTTCAC 60.550 47.826 0.00 0.00 32.84 3.18
1673 3025 2.621055 CCCGTTGTTGTTGATTCCTTCA 59.379 45.455 0.00 0.00 0.00 3.02
1674 3026 2.621526 ACCCGTTGTTGTTGATTCCTTC 59.378 45.455 0.00 0.00 0.00 3.46
1675 3027 2.360801 CACCCGTTGTTGTTGATTCCTT 59.639 45.455 0.00 0.00 0.00 3.36
1676 3028 1.953686 CACCCGTTGTTGTTGATTCCT 59.046 47.619 0.00 0.00 0.00 3.36
1677 3029 1.950909 TCACCCGTTGTTGTTGATTCC 59.049 47.619 0.00 0.00 0.00 3.01
1678 3030 2.616842 AGTCACCCGTTGTTGTTGATTC 59.383 45.455 0.00 0.00 0.00 2.52
1679 3031 2.357637 CAGTCACCCGTTGTTGTTGATT 59.642 45.455 0.00 0.00 0.00 2.57
1680 3032 1.946768 CAGTCACCCGTTGTTGTTGAT 59.053 47.619 0.00 0.00 0.00 2.57
1681 3033 1.339247 ACAGTCACCCGTTGTTGTTGA 60.339 47.619 0.00 0.00 0.00 3.18
1682 3034 1.091537 ACAGTCACCCGTTGTTGTTG 58.908 50.000 0.00 0.00 0.00 3.33
1683 3035 1.091537 CACAGTCACCCGTTGTTGTT 58.908 50.000 0.00 0.00 0.00 2.83
1684 3036 0.746563 CCACAGTCACCCGTTGTTGT 60.747 55.000 0.00 0.00 0.00 3.32
1685 3037 1.444119 CCCACAGTCACCCGTTGTTG 61.444 60.000 0.00 0.00 0.00 3.33
1686 3038 1.153046 CCCACAGTCACCCGTTGTT 60.153 57.895 0.00 0.00 0.00 2.83
1687 3039 2.372074 ACCCACAGTCACCCGTTGT 61.372 57.895 0.00 0.00 0.00 3.32
1688 3040 1.891919 CACCCACAGTCACCCGTTG 60.892 63.158 0.00 0.00 0.00 4.10
1689 3041 2.372074 ACACCCACAGTCACCCGTT 61.372 57.895 0.00 0.00 0.00 4.44
1690 3042 2.766651 ACACCCACAGTCACCCGT 60.767 61.111 0.00 0.00 0.00 5.28
1691 3043 1.750341 TACACACCCACAGTCACCCG 61.750 60.000 0.00 0.00 0.00 5.28
1692 3044 0.690762 ATACACACCCACAGTCACCC 59.309 55.000 0.00 0.00 0.00 4.61
1693 3045 1.610624 CCATACACACCCACAGTCACC 60.611 57.143 0.00 0.00 0.00 4.02
1694 3046 1.346395 TCCATACACACCCACAGTCAC 59.654 52.381 0.00 0.00 0.00 3.67
1695 3047 1.623311 CTCCATACACACCCACAGTCA 59.377 52.381 0.00 0.00 0.00 3.41
1696 3048 1.676014 GCTCCATACACACCCACAGTC 60.676 57.143 0.00 0.00 0.00 3.51
1697 3049 0.324943 GCTCCATACACACCCACAGT 59.675 55.000 0.00 0.00 0.00 3.55
1698 3050 0.615331 AGCTCCATACACACCCACAG 59.385 55.000 0.00 0.00 0.00 3.66
1699 3051 0.324614 CAGCTCCATACACACCCACA 59.675 55.000 0.00 0.00 0.00 4.17
1700 3052 0.324943 ACAGCTCCATACACACCCAC 59.675 55.000 0.00 0.00 0.00 4.61
1701 3053 1.064003 AACAGCTCCATACACACCCA 58.936 50.000 0.00 0.00 0.00 4.51
1702 3054 1.812571 CAAACAGCTCCATACACACCC 59.187 52.381 0.00 0.00 0.00 4.61
1703 3055 1.812571 CCAAACAGCTCCATACACACC 59.187 52.381 0.00 0.00 0.00 4.16
1704 3056 2.778299 TCCAAACAGCTCCATACACAC 58.222 47.619 0.00 0.00 0.00 3.82
1705 3057 3.719268 ATCCAAACAGCTCCATACACA 57.281 42.857 0.00 0.00 0.00 3.72
1706 3058 3.063997 CGAATCCAAACAGCTCCATACAC 59.936 47.826 0.00 0.00 0.00 2.90
1707 3059 3.270027 CGAATCCAAACAGCTCCATACA 58.730 45.455 0.00 0.00 0.00 2.29
1708 3060 2.614057 CCGAATCCAAACAGCTCCATAC 59.386 50.000 0.00 0.00 0.00 2.39
1709 3061 2.917933 CCGAATCCAAACAGCTCCATA 58.082 47.619 0.00 0.00 0.00 2.74
1710 3062 1.755179 CCGAATCCAAACAGCTCCAT 58.245 50.000 0.00 0.00 0.00 3.41
1711 3063 0.960364 GCCGAATCCAAACAGCTCCA 60.960 55.000 0.00 0.00 0.00 3.86
1712 3064 1.657751 GGCCGAATCCAAACAGCTCC 61.658 60.000 0.00 0.00 0.00 4.70
1713 3065 1.657751 GGGCCGAATCCAAACAGCTC 61.658 60.000 0.00 0.00 0.00 4.09
1714 3066 1.678970 GGGCCGAATCCAAACAGCT 60.679 57.895 0.00 0.00 0.00 4.24
1715 3067 1.678970 AGGGCCGAATCCAAACAGC 60.679 57.895 0.00 0.00 0.00 4.40
1716 3068 1.937546 GCAGGGCCGAATCCAAACAG 61.938 60.000 0.00 0.00 0.00 3.16
1717 3069 1.976474 GCAGGGCCGAATCCAAACA 60.976 57.895 0.00 0.00 0.00 2.83
1718 3070 0.393808 TAGCAGGGCCGAATCCAAAC 60.394 55.000 0.00 0.00 0.00 2.93
1719 3071 0.107214 CTAGCAGGGCCGAATCCAAA 60.107 55.000 0.00 0.00 0.00 3.28
1720 3072 1.526887 CTAGCAGGGCCGAATCCAA 59.473 57.895 0.00 0.00 0.00 3.53
1721 3073 3.106986 GCTAGCAGGGCCGAATCCA 62.107 63.158 10.63 0.00 0.00 3.41
1722 3074 2.281139 GCTAGCAGGGCCGAATCC 60.281 66.667 10.63 0.00 0.00 3.01
1723 3075 2.281139 GGCTAGCAGGGCCGAATC 60.281 66.667 18.24 0.00 40.19 2.52
1730 3082 3.721370 ATTTGGCGGGCTAGCAGGG 62.721 63.158 18.24 5.78 39.27 4.45
1731 3083 2.124151 ATTTGGCGGGCTAGCAGG 60.124 61.111 18.24 8.52 39.27 4.85
1732 3084 0.820891 ATGATTTGGCGGGCTAGCAG 60.821 55.000 18.24 11.07 39.27 4.24
1733 3085 0.395586 AATGATTTGGCGGGCTAGCA 60.396 50.000 18.24 0.28 39.27 3.49
1734 3086 0.031178 CAATGATTTGGCGGGCTAGC 59.969 55.000 6.04 6.04 0.00 3.42
1735 3087 0.670162 CCAATGATTTGGCGGGCTAG 59.330 55.000 2.38 0.00 45.71 3.42
1736 3088 2.805897 CCAATGATTTGGCGGGCTA 58.194 52.632 2.38 0.00 45.71 3.93
1737 3089 3.619938 CCAATGATTTGGCGGGCT 58.380 55.556 2.38 0.00 45.71 5.19
1756 3108 2.604462 GTGACAAGCAGCCAAAACTTTG 59.396 45.455 0.00 0.00 37.90 2.77
1757 3109 2.418609 GGTGACAAGCAGCCAAAACTTT 60.419 45.455 0.00 0.00 39.07 2.66
1758 3110 1.136891 GGTGACAAGCAGCCAAAACTT 59.863 47.619 0.00 0.00 39.07 2.66
1759 3111 0.746659 GGTGACAAGCAGCCAAAACT 59.253 50.000 0.00 0.00 39.07 2.66
1760 3112 0.594796 CGGTGACAAGCAGCCAAAAC 60.595 55.000 0.00 0.00 41.93 2.43
1761 3113 0.749818 TCGGTGACAAGCAGCCAAAA 60.750 50.000 0.00 0.00 41.93 2.44
1762 3114 0.749818 TTCGGTGACAAGCAGCCAAA 60.750 50.000 0.00 0.00 41.93 3.28
1763 3115 0.537143 ATTCGGTGACAAGCAGCCAA 60.537 50.000 0.00 0.00 41.93 4.52
1764 3116 0.537143 AATTCGGTGACAAGCAGCCA 60.537 50.000 0.00 0.00 41.93 4.75
1765 3117 1.130561 GTAATTCGGTGACAAGCAGCC 59.869 52.381 0.00 0.00 41.93 4.85
1766 3118 2.076863 AGTAATTCGGTGACAAGCAGC 58.923 47.619 0.00 0.00 41.53 5.25
1767 3119 3.307242 GCTAGTAATTCGGTGACAAGCAG 59.693 47.826 0.00 0.00 0.00 4.24
1768 3120 3.259064 GCTAGTAATTCGGTGACAAGCA 58.741 45.455 0.00 0.00 0.00 3.91
1769 3121 3.259064 TGCTAGTAATTCGGTGACAAGC 58.741 45.455 0.00 0.00 0.00 4.01
1770 3122 5.109210 TCATGCTAGTAATTCGGTGACAAG 58.891 41.667 0.00 0.00 0.00 3.16
1771 3123 5.079689 TCATGCTAGTAATTCGGTGACAA 57.920 39.130 0.00 0.00 0.00 3.18
1772 3124 4.729227 TCATGCTAGTAATTCGGTGACA 57.271 40.909 0.00 0.00 0.00 3.58
1773 3125 5.581085 ACTTTCATGCTAGTAATTCGGTGAC 59.419 40.000 0.00 0.00 0.00 3.67
1774 3126 5.580691 CACTTTCATGCTAGTAATTCGGTGA 59.419 40.000 0.00 0.00 0.00 4.02
1775 3127 5.580691 TCACTTTCATGCTAGTAATTCGGTG 59.419 40.000 0.00 0.00 0.00 4.94
1776 3128 5.730550 TCACTTTCATGCTAGTAATTCGGT 58.269 37.500 0.00 0.00 0.00 4.69
1777 3129 6.662414 TTCACTTTCATGCTAGTAATTCGG 57.338 37.500 0.00 0.00 0.00 4.30
1778 3130 7.164826 GCAATTCACTTTCATGCTAGTAATTCG 59.835 37.037 0.00 0.00 34.29 3.34
1779 3131 7.970061 TGCAATTCACTTTCATGCTAGTAATTC 59.030 33.333 0.00 0.00 37.86 2.17
1780 3132 7.829725 TGCAATTCACTTTCATGCTAGTAATT 58.170 30.769 0.00 0.00 37.86 1.40
1781 3133 7.395190 TGCAATTCACTTTCATGCTAGTAAT 57.605 32.000 0.00 0.00 37.86 1.89
1782 3134 6.623549 GCTGCAATTCACTTTCATGCTAGTAA 60.624 38.462 0.00 0.00 37.86 2.24
1783 3135 5.163723 GCTGCAATTCACTTTCATGCTAGTA 60.164 40.000 0.00 0.00 37.86 1.82
1784 3136 4.380233 GCTGCAATTCACTTTCATGCTAGT 60.380 41.667 0.00 0.00 37.86 2.57
1785 3137 4.103357 GCTGCAATTCACTTTCATGCTAG 58.897 43.478 0.00 0.00 37.86 3.42
1786 3138 3.119388 GGCTGCAATTCACTTTCATGCTA 60.119 43.478 0.50 0.00 37.86 3.49
1787 3139 2.353406 GGCTGCAATTCACTTTCATGCT 60.353 45.455 0.50 0.00 37.86 3.79
1788 3140 1.997606 GGCTGCAATTCACTTTCATGC 59.002 47.619 0.50 0.00 37.52 4.06
1789 3141 2.991190 GTGGCTGCAATTCACTTTCATG 59.009 45.455 0.50 0.00 0.00 3.07
1790 3142 2.028748 GGTGGCTGCAATTCACTTTCAT 60.029 45.455 0.50 0.00 0.00 2.57
1791 3143 1.340889 GGTGGCTGCAATTCACTTTCA 59.659 47.619 0.50 0.00 0.00 2.69
1792 3144 1.666888 CGGTGGCTGCAATTCACTTTC 60.667 52.381 0.50 0.00 0.00 2.62
1793 3145 0.314935 CGGTGGCTGCAATTCACTTT 59.685 50.000 0.50 0.00 0.00 2.66
1794 3146 0.537143 TCGGTGGCTGCAATTCACTT 60.537 50.000 0.50 0.00 0.00 3.16
1795 3147 0.322816 ATCGGTGGCTGCAATTCACT 60.323 50.000 0.50 0.00 0.00 3.41
1796 3148 1.378531 TATCGGTGGCTGCAATTCAC 58.621 50.000 0.50 0.00 0.00 3.18
1797 3149 2.346766 ATATCGGTGGCTGCAATTCA 57.653 45.000 0.50 0.00 0.00 2.57
1798 3150 3.058224 GGTTATATCGGTGGCTGCAATTC 60.058 47.826 0.50 0.00 0.00 2.17
1799 3151 2.884639 GGTTATATCGGTGGCTGCAATT 59.115 45.455 0.50 0.00 0.00 2.32
1800 3152 2.106511 AGGTTATATCGGTGGCTGCAAT 59.893 45.455 0.50 0.00 0.00 3.56
1801 3153 1.488812 AGGTTATATCGGTGGCTGCAA 59.511 47.619 0.50 0.00 0.00 4.08
1802 3154 1.128200 AGGTTATATCGGTGGCTGCA 58.872 50.000 0.50 0.00 0.00 4.41
1803 3155 1.873591 CAAGGTTATATCGGTGGCTGC 59.126 52.381 0.00 0.00 0.00 5.25
1804 3156 2.494059 CCAAGGTTATATCGGTGGCTG 58.506 52.381 0.00 0.00 0.00 4.85
1805 3157 1.202770 GCCAAGGTTATATCGGTGGCT 60.203 52.381 14.65 0.00 46.42 4.75
1806 3158 1.235724 GCCAAGGTTATATCGGTGGC 58.764 55.000 9.41 9.41 44.23 5.01
1807 3159 2.631160 TGCCAAGGTTATATCGGTGG 57.369 50.000 0.00 0.00 0.00 4.61
1808 3160 2.290641 GCTTGCCAAGGTTATATCGGTG 59.709 50.000 6.57 0.00 0.00 4.94
1809 3161 2.172717 AGCTTGCCAAGGTTATATCGGT 59.827 45.455 2.71 0.00 35.27 4.69
1810 3162 2.549754 CAGCTTGCCAAGGTTATATCGG 59.450 50.000 6.38 0.00 37.06 4.18
1811 3163 3.466836 TCAGCTTGCCAAGGTTATATCG 58.533 45.455 6.38 0.00 37.06 2.92
1812 3164 7.510549 TTATTCAGCTTGCCAAGGTTATATC 57.489 36.000 6.38 0.00 37.06 1.63
1813 3165 7.524367 GCATTATTCAGCTTGCCAAGGTTATAT 60.524 37.037 6.38 3.64 37.06 0.86
1814 3166 6.239008 GCATTATTCAGCTTGCCAAGGTTATA 60.239 38.462 6.38 5.42 37.06 0.98
1815 3167 5.452356 GCATTATTCAGCTTGCCAAGGTTAT 60.452 40.000 6.38 6.36 37.06 1.89
1816 3168 4.142182 GCATTATTCAGCTTGCCAAGGTTA 60.142 41.667 6.38 0.00 37.06 2.85
1817 3169 3.368739 GCATTATTCAGCTTGCCAAGGTT 60.369 43.478 6.38 0.00 37.06 3.50
1818 3170 2.167075 GCATTATTCAGCTTGCCAAGGT 59.833 45.455 2.71 2.71 40.45 3.50
1819 3171 2.797087 CGCATTATTCAGCTTGCCAAGG 60.797 50.000 6.57 0.00 0.00 3.61
1820 3172 2.456989 CGCATTATTCAGCTTGCCAAG 58.543 47.619 0.00 0.00 0.00 3.61
1821 3173 1.469595 GCGCATTATTCAGCTTGCCAA 60.470 47.619 0.30 0.00 0.00 4.52
1822 3174 0.101040 GCGCATTATTCAGCTTGCCA 59.899 50.000 0.30 0.00 0.00 4.92
1823 3175 0.383231 AGCGCATTATTCAGCTTGCC 59.617 50.000 11.47 0.00 36.41 4.52
1824 3176 1.598924 GGAGCGCATTATTCAGCTTGC 60.599 52.381 11.47 0.00 40.39 4.01
1825 3177 1.002033 GGGAGCGCATTATTCAGCTTG 60.002 52.381 11.47 0.00 40.39 4.01
1826 3178 1.312815 GGGAGCGCATTATTCAGCTT 58.687 50.000 11.47 0.00 40.39 3.74
1827 3179 0.181114 TGGGAGCGCATTATTCAGCT 59.819 50.000 11.47 0.00 43.33 4.24
1828 3180 1.198637 GATGGGAGCGCATTATTCAGC 59.801 52.381 11.47 0.00 0.00 4.26
1829 3181 1.808945 GGATGGGAGCGCATTATTCAG 59.191 52.381 11.47 0.00 0.00 3.02
1830 3182 1.142667 TGGATGGGAGCGCATTATTCA 59.857 47.619 11.47 0.00 0.00 2.57
1831 3183 1.896220 TGGATGGGAGCGCATTATTC 58.104 50.000 11.47 0.00 0.00 1.75
1832 3184 2.362077 GTTTGGATGGGAGCGCATTATT 59.638 45.455 11.47 0.00 0.00 1.40
1833 3185 1.956477 GTTTGGATGGGAGCGCATTAT 59.044 47.619 11.47 0.00 0.00 1.28
1834 3186 1.340502 TGTTTGGATGGGAGCGCATTA 60.341 47.619 11.47 0.00 0.00 1.90
1835 3187 0.611618 TGTTTGGATGGGAGCGCATT 60.612 50.000 11.47 0.00 0.00 3.56
1836 3188 0.611618 TTGTTTGGATGGGAGCGCAT 60.612 50.000 11.47 0.00 0.00 4.73
1837 3189 0.825425 TTTGTTTGGATGGGAGCGCA 60.825 50.000 11.47 0.00 0.00 6.09
1838 3190 0.532115 ATTTGTTTGGATGGGAGCGC 59.468 50.000 0.00 0.00 0.00 5.92
1839 3191 1.736696 GCATTTGTTTGGATGGGAGCG 60.737 52.381 0.00 0.00 0.00 5.03
1840 3192 1.275856 TGCATTTGTTTGGATGGGAGC 59.724 47.619 0.00 0.00 0.00 4.70
1841 3193 2.671914 CGTGCATTTGTTTGGATGGGAG 60.672 50.000 0.00 0.00 0.00 4.30
1842 3194 1.271934 CGTGCATTTGTTTGGATGGGA 59.728 47.619 0.00 0.00 0.00 4.37
1843 3195 1.271934 TCGTGCATTTGTTTGGATGGG 59.728 47.619 0.00 0.00 0.00 4.00
1844 3196 2.721274 TCGTGCATTTGTTTGGATGG 57.279 45.000 0.00 0.00 0.00 3.51
1845 3197 4.985413 ACTATCGTGCATTTGTTTGGATG 58.015 39.130 0.00 0.00 0.00 3.51
1846 3198 4.699735 TGACTATCGTGCATTTGTTTGGAT 59.300 37.500 0.00 0.00 0.00 3.41
1847 3199 4.068599 TGACTATCGTGCATTTGTTTGGA 58.931 39.130 0.00 0.00 0.00 3.53
1848 3200 4.418013 TGACTATCGTGCATTTGTTTGG 57.582 40.909 0.00 0.00 0.00 3.28
1849 3201 5.211454 TGTTGACTATCGTGCATTTGTTTG 58.789 37.500 0.00 0.00 0.00 2.93
1850 3202 5.431420 TGTTGACTATCGTGCATTTGTTT 57.569 34.783 0.00 0.00 0.00 2.83
1851 3203 5.627499 ATGTTGACTATCGTGCATTTGTT 57.373 34.783 0.00 0.00 0.00 2.83
1852 3204 5.627499 AATGTTGACTATCGTGCATTTGT 57.373 34.783 0.00 0.00 0.00 2.83
1853 3205 6.317088 AGAAATGTTGACTATCGTGCATTTG 58.683 36.000 0.00 0.00 36.89 2.32
1854 3206 6.500684 AGAAATGTTGACTATCGTGCATTT 57.499 33.333 0.00 0.00 38.66 2.32
1855 3207 6.500684 AAGAAATGTTGACTATCGTGCATT 57.499 33.333 0.00 0.00 0.00 3.56
1856 3208 7.792374 ATAAGAAATGTTGACTATCGTGCAT 57.208 32.000 0.00 0.00 0.00 3.96
1857 3209 7.609760 AATAAGAAATGTTGACTATCGTGCA 57.390 32.000 0.00 0.00 0.00 4.57
1858 3210 8.175069 TGAAATAAGAAATGTTGACTATCGTGC 58.825 33.333 0.00 0.00 0.00 5.34
1864 3216 9.230122 TGCAGATGAAATAAGAAATGTTGACTA 57.770 29.630 0.00 0.00 0.00 2.59
1865 3217 8.114331 TGCAGATGAAATAAGAAATGTTGACT 57.886 30.769 0.00 0.00 0.00 3.41
1866 3218 8.922058 ATGCAGATGAAATAAGAAATGTTGAC 57.078 30.769 0.00 0.00 0.00 3.18
1873 3225 9.874205 CCCTTTTAATGCAGATGAAATAAGAAA 57.126 29.630 0.00 0.00 0.00 2.52
1874 3226 8.477256 CCCCTTTTAATGCAGATGAAATAAGAA 58.523 33.333 0.00 0.00 0.00 2.52
1875 3227 7.838696 TCCCCTTTTAATGCAGATGAAATAAGA 59.161 33.333 0.00 0.00 0.00 2.10
1876 3228 7.922811 GTCCCCTTTTAATGCAGATGAAATAAG 59.077 37.037 0.00 0.00 0.00 1.73
1877 3229 7.398618 TGTCCCCTTTTAATGCAGATGAAATAA 59.601 33.333 0.00 0.00 0.00 1.40
1878 3230 6.894654 TGTCCCCTTTTAATGCAGATGAAATA 59.105 34.615 0.00 0.00 0.00 1.40
1879 3231 5.721000 TGTCCCCTTTTAATGCAGATGAAAT 59.279 36.000 0.00 0.00 0.00 2.17
1880 3232 5.083122 TGTCCCCTTTTAATGCAGATGAAA 58.917 37.500 0.00 0.00 0.00 2.69
1881 3233 4.671831 TGTCCCCTTTTAATGCAGATGAA 58.328 39.130 0.00 0.00 0.00 2.57
1882 3234 4.314522 TGTCCCCTTTTAATGCAGATGA 57.685 40.909 0.00 0.00 0.00 2.92
1883 3235 4.220382 TGTTGTCCCCTTTTAATGCAGATG 59.780 41.667 0.00 0.00 0.00 2.90
1884 3236 4.415596 TGTTGTCCCCTTTTAATGCAGAT 58.584 39.130 0.00 0.00 0.00 2.90
1885 3237 3.838565 TGTTGTCCCCTTTTAATGCAGA 58.161 40.909 0.00 0.00 0.00 4.26
1886 3238 4.021192 ACATGTTGTCCCCTTTTAATGCAG 60.021 41.667 0.00 0.00 0.00 4.41
1887 3239 3.900601 ACATGTTGTCCCCTTTTAATGCA 59.099 39.130 0.00 0.00 0.00 3.96
1888 3240 4.535526 ACATGTTGTCCCCTTTTAATGC 57.464 40.909 0.00 0.00 0.00 3.56
1889 3241 7.093988 TGACATACATGTTGTCCCCTTTTAATG 60.094 37.037 25.16 13.57 42.25 1.90
1890 3242 6.951198 TGACATACATGTTGTCCCCTTTTAAT 59.049 34.615 25.16 2.08 42.25 1.40
1891 3243 6.307776 TGACATACATGTTGTCCCCTTTTAA 58.692 36.000 25.16 11.17 42.25 1.52
1892 3244 5.882040 TGACATACATGTTGTCCCCTTTTA 58.118 37.500 25.16 11.65 42.25 1.52
1893 3245 4.735369 TGACATACATGTTGTCCCCTTTT 58.265 39.130 25.16 2.71 42.25 2.27
1894 3246 4.380843 TGACATACATGTTGTCCCCTTT 57.619 40.909 25.16 3.24 42.25 3.11
1895 3247 4.228210 AGATGACATACATGTTGTCCCCTT 59.772 41.667 25.16 14.67 42.25 3.95
1896 3248 3.782523 AGATGACATACATGTTGTCCCCT 59.217 43.478 25.16 20.71 42.25 4.79
1897 3249 4.156455 AGATGACATACATGTTGTCCCC 57.844 45.455 25.16 19.55 42.25 4.81
1898 3250 5.431765 AGAAGATGACATACATGTTGTCCC 58.568 41.667 25.16 19.77 41.49 4.46
1899 3251 6.992063 AAGAAGATGACATACATGTTGTCC 57.008 37.500 25.16 16.70 41.49 4.02
1900 3252 9.979270 CTTAAAGAAGATGACATACATGTTGTC 57.021 33.333 23.17 23.17 41.49 3.18
1901 3253 9.725019 TCTTAAAGAAGATGACATACATGTTGT 57.275 29.630 2.30 8.53 41.49 3.32
1903 3255 9.388506 CCTCTTAAAGAAGATGACATACATGTT 57.611 33.333 2.30 0.00 43.57 2.71
1904 3256 8.543774 ACCTCTTAAAGAAGATGACATACATGT 58.456 33.333 2.69 2.69 40.95 3.21
1905 3257 8.954950 ACCTCTTAAAGAAGATGACATACATG 57.045 34.615 0.00 0.00 40.95 3.21
1910 3262 9.793259 TTGTTAACCTCTTAAAGAAGATGACAT 57.207 29.630 2.48 0.00 40.95 3.06
1911 3263 9.621629 TTTGTTAACCTCTTAAAGAAGATGACA 57.378 29.630 2.48 0.00 40.95 3.58
1916 3268 8.357402 GCCATTTTGTTAACCTCTTAAAGAAGA 58.643 33.333 2.48 0.00 39.47 2.87
1917 3269 8.141268 TGCCATTTTGTTAACCTCTTAAAGAAG 58.859 33.333 2.48 0.00 0.00 2.85
1918 3270 8.012957 TGCCATTTTGTTAACCTCTTAAAGAA 57.987 30.769 2.48 0.00 0.00 2.52
1919 3271 7.255801 CCTGCCATTTTGTTAACCTCTTAAAGA 60.256 37.037 2.48 0.00 0.00 2.52
1920 3272 6.868339 CCTGCCATTTTGTTAACCTCTTAAAG 59.132 38.462 2.48 0.00 0.00 1.85
1921 3273 6.740122 GCCTGCCATTTTGTTAACCTCTTAAA 60.740 38.462 2.48 0.00 0.00 1.52
1922 3274 5.279256 GCCTGCCATTTTGTTAACCTCTTAA 60.279 40.000 2.48 0.00 0.00 1.85
1923 3275 4.219725 GCCTGCCATTTTGTTAACCTCTTA 59.780 41.667 2.48 0.00 0.00 2.10
1924 3276 3.006859 GCCTGCCATTTTGTTAACCTCTT 59.993 43.478 2.48 0.00 0.00 2.85
1925 3277 2.562738 GCCTGCCATTTTGTTAACCTCT 59.437 45.455 2.48 0.00 0.00 3.69
1926 3278 2.353704 GGCCTGCCATTTTGTTAACCTC 60.354 50.000 2.58 0.00 35.81 3.85
1927 3279 1.623311 GGCCTGCCATTTTGTTAACCT 59.377 47.619 2.58 0.00 35.81 3.50
1928 3280 1.671556 CGGCCTGCCATTTTGTTAACC 60.672 52.381 9.17 0.00 35.37 2.85
1929 3281 1.271102 TCGGCCTGCCATTTTGTTAAC 59.729 47.619 9.17 0.00 35.37 2.01
1930 3282 1.621992 TCGGCCTGCCATTTTGTTAA 58.378 45.000 9.17 0.00 35.37 2.01
1931 3283 1.621992 TTCGGCCTGCCATTTTGTTA 58.378 45.000 9.17 0.00 35.37 2.41
1932 3284 0.975887 ATTCGGCCTGCCATTTTGTT 59.024 45.000 9.17 0.00 35.37 2.83
1933 3285 0.975887 AATTCGGCCTGCCATTTTGT 59.024 45.000 9.17 0.00 35.37 2.83
1934 3286 2.957491 TAATTCGGCCTGCCATTTTG 57.043 45.000 9.17 0.00 35.37 2.44
1935 3287 2.765699 ACATAATTCGGCCTGCCATTTT 59.234 40.909 9.17 0.76 35.37 1.82
1936 3288 2.387757 ACATAATTCGGCCTGCCATTT 58.612 42.857 9.17 1.11 35.37 2.32
1937 3289 2.071778 ACATAATTCGGCCTGCCATT 57.928 45.000 9.17 4.12 35.37 3.16
1938 3290 2.071778 AACATAATTCGGCCTGCCAT 57.928 45.000 9.17 0.00 35.37 4.40
1939 3291 1.846007 AAACATAATTCGGCCTGCCA 58.154 45.000 9.17 0.00 35.37 4.92
1940 3292 5.699097 TTATAAACATAATTCGGCCTGCC 57.301 39.130 0.00 0.00 0.00 4.85
1941 3293 9.124807 GTAATTTATAAACATAATTCGGCCTGC 57.875 33.333 0.00 0.00 0.00 4.85
1957 3309 9.880157 ACGGACTCTTTTGCTAGTAATTTATAA 57.120 29.630 0.00 0.00 0.00 0.98
1958 3310 9.309516 CACGGACTCTTTTGCTAGTAATTTATA 57.690 33.333 0.00 0.00 0.00 0.98
1959 3311 7.201617 GCACGGACTCTTTTGCTAGTAATTTAT 60.202 37.037 0.00 0.00 32.00 1.40
1960 3312 6.091713 GCACGGACTCTTTTGCTAGTAATTTA 59.908 38.462 0.00 0.00 32.00 1.40
1961 3313 5.106673 GCACGGACTCTTTTGCTAGTAATTT 60.107 40.000 0.00 0.00 32.00 1.82
1962 3314 4.392138 GCACGGACTCTTTTGCTAGTAATT 59.608 41.667 0.00 0.00 32.00 1.40
2044 3396 7.451731 AATAAAGGAGATGGACCTATTGTGA 57.548 36.000 0.00 0.00 36.67 3.58
2079 3431 6.868864 AGGATAAGCGACAACACATATATGAC 59.131 38.462 19.63 3.08 0.00 3.06
2086 3438 2.501723 AGGAGGATAAGCGACAACACAT 59.498 45.455 0.00 0.00 0.00 3.21
2094 3446 2.520069 GAGGATGAGGAGGATAAGCGA 58.480 52.381 0.00 0.00 0.00 4.93
2110 3465 3.458163 GGTCATCACCGGCGAGGA 61.458 66.667 9.30 2.05 45.00 3.71
2125 3480 1.741145 GTTTTGTGTGAACACCGAGGT 59.259 47.619 10.92 0.00 45.88 3.85
2207 3564 3.397527 AGTGAGAGAGAGAGAGGGAGAT 58.602 50.000 0.00 0.00 0.00 2.75
2313 3680 6.103997 CCGCACTATAACCATATACGGAAAT 58.896 40.000 0.00 0.00 35.06 2.17
2335 3702 2.162608 TCCGGATTGCAAATAAACACCG 59.837 45.455 1.71 9.95 39.02 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.