Multiple sequence alignment - TraesCS7A01G323800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G323800 chr7A 100.000 5226 0 0 1 5226 471004828 470999603 0.000000e+00 9651.0
1 TraesCS7A01G323800 chr7D 94.336 2825 113 24 552 3346 411008969 411011776 0.000000e+00 4287.0
2 TraesCS7A01G323800 chr7D 94.842 1357 50 8 3478 4820 411011826 411013176 0.000000e+00 2100.0
3 TraesCS7A01G323800 chr7D 94.298 228 11 1 4999 5226 411013892 411014117 1.080000e-91 348.0
4 TraesCS7A01G323800 chr7B 93.114 2861 137 23 500 3320 424569500 424566660 0.000000e+00 4137.0
5 TraesCS7A01G323800 chr7B 92.219 1388 70 21 3438 4815 424566500 424565141 0.000000e+00 1930.0
6 TraesCS7A01G323800 chr7B 93.886 229 13 1 4998 5226 424543577 424543350 1.390000e-90 344.0
7 TraesCS7A01G323800 chr7B 88.312 154 15 3 351 502 424570802 424570650 1.160000e-41 182.0
8 TraesCS7A01G323800 chr5D 89.139 267 21 4 1 267 310023254 310023512 5.050000e-85 326.0
9 TraesCS7A01G323800 chr2D 89.286 224 24 0 40 263 460640763 460640540 1.110000e-71 281.0
10 TraesCS7A01G323800 chr2D 100.000 34 0 0 1 34 460640819 460640786 4.370000e-06 63.9
11 TraesCS7A01G323800 chr2D 80.952 84 11 4 4531 4614 255618775 255618853 1.570000e-05 62.1
12 TraesCS7A01G323800 chr5B 79.592 196 37 3 4510 4704 527760595 527760402 2.540000e-28 137.0
13 TraesCS7A01G323800 chr2B 75.229 218 45 9 4510 4722 680079976 680079763 1.550000e-15 95.3
14 TraesCS7A01G323800 chr1D 87.500 72 6 3 4632 4702 15308317 15308386 4.340000e-11 80.5
15 TraesCS7A01G323800 chr1D 95.122 41 1 1 4662 4702 236323710 236323671 4.370000e-06 63.9
16 TraesCS7A01G323800 chr1A 84.416 77 9 3 4630 4704 16393957 16394032 7.260000e-09 73.1
17 TraesCS7A01G323800 chr6D 86.441 59 7 1 4671 4729 21591912 21591855 4.370000e-06 63.9
18 TraesCS7A01G323800 chr3D 92.683 41 2 1 4660 4700 573685426 573685387 2.030000e-04 58.4
19 TraesCS7A01G323800 chr3D 96.970 33 1 0 4670 4702 494996673 494996641 7.310000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G323800 chr7A 470999603 471004828 5225 True 9651 9651 100.000 1 5226 1 chr7A.!!$R1 5225
1 TraesCS7A01G323800 chr7D 411008969 411014117 5148 False 2245 4287 94.492 552 5226 3 chr7D.!!$F1 4674
2 TraesCS7A01G323800 chr7B 424565141 424570802 5661 True 2083 4137 91.215 351 4815 3 chr7B.!!$R2 4464

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
214 215 0.033405 CGAGGGAGGAGGTGGAAGTA 60.033 60.0 0.00 0.0 0.00 2.24 F
468 469 0.038618 CCACAGTCATCCGTTGTCGA 60.039 55.0 0.00 0.0 39.71 4.20 F
653 1809 0.535335 ATGACGGGCACTACAATCGT 59.465 50.0 0.00 0.0 36.74 3.73 F
2270 3466 0.537143 TTCATGTGAGTGGCGGCTTT 60.537 50.0 11.43 0.0 0.00 3.51 F
3117 4325 0.753262 GGACAGTGCATCCGGTCTAT 59.247 55.0 0.00 0.0 0.00 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 2660 0.747852 GAGGAAGAGGAACTAGCGGG 59.252 60.0 0.00 0.0 41.55 6.13 R
2381 3585 0.037046 GCCTTGAAAACCAGGCCATG 60.037 55.0 5.01 0.0 41.28 3.66 R
2565 3772 1.882912 TCCTGCACATCACAGTTCAC 58.117 50.0 0.00 0.0 33.09 3.18 R
3378 4718 0.035820 TACCCAAATCAGTGACGGGC 60.036 55.0 19.51 0.0 40.87 6.13 R
4865 6229 0.038526 GGACGTCGAGAGCTCCAAAA 60.039 55.0 10.93 0.0 0.00 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.821589 CACCGAGAAGGGCGCCTC 62.822 72.222 28.56 17.60 46.96 4.70
37 38 4.135153 CTCCCCGTGAGCCGTCTG 62.135 72.222 0.00 0.00 33.47 3.51
38 39 4.671590 TCCCCGTGAGCCGTCTGA 62.672 66.667 0.00 0.00 33.66 3.27
39 40 4.436998 CCCCGTGAGCCGTCTGAC 62.437 72.222 0.00 0.00 33.66 3.51
40 41 4.778415 CCCGTGAGCCGTCTGACG 62.778 72.222 22.49 22.49 46.96 4.35
67 68 4.962122 CACACCGCTGCGCACAAC 62.962 66.667 18.00 0.00 0.00 3.32
73 74 4.166011 GCTGCGCACAACCGGATC 62.166 66.667 9.46 0.00 0.00 3.36
74 75 3.499737 CTGCGCACAACCGGATCC 61.500 66.667 9.46 0.00 0.00 3.36
75 76 4.321966 TGCGCACAACCGGATCCA 62.322 61.111 9.46 0.00 0.00 3.41
76 77 3.799755 GCGCACAACCGGATCCAC 61.800 66.667 9.46 0.00 0.00 4.02
77 78 3.124921 CGCACAACCGGATCCACC 61.125 66.667 9.46 0.00 0.00 4.61
78 79 2.033448 GCACAACCGGATCCACCA 59.967 61.111 9.46 0.00 38.90 4.17
79 80 1.602323 GCACAACCGGATCCACCAA 60.602 57.895 9.46 0.00 38.90 3.67
80 81 1.862602 GCACAACCGGATCCACCAAC 61.863 60.000 9.46 0.00 38.90 3.77
81 82 1.074248 ACAACCGGATCCACCAACC 59.926 57.895 9.46 0.00 38.90 3.77
82 83 2.038269 CAACCGGATCCACCAACCG 61.038 63.158 9.46 0.00 45.24 4.44
83 84 3.912745 AACCGGATCCACCAACCGC 62.913 63.158 9.46 0.00 44.45 5.68
92 93 4.814294 ACCAACCGCCGCGAGATC 62.814 66.667 15.93 0.00 0.00 2.75
103 104 4.570663 CGAGATCCGCCCACGTCC 62.571 72.222 0.00 0.00 37.70 4.79
104 105 3.458163 GAGATCCGCCCACGTCCA 61.458 66.667 0.00 0.00 37.70 4.02
105 106 3.718210 GAGATCCGCCCACGTCCAC 62.718 68.421 0.00 0.00 37.70 4.02
106 107 4.832608 GATCCGCCCACGTCCACC 62.833 72.222 0.00 0.00 37.70 4.61
113 114 3.307906 CCACGTCCACCGGGAGAA 61.308 66.667 6.32 0.00 45.03 2.87
114 115 2.656069 CCACGTCCACCGGGAGAAT 61.656 63.158 6.32 0.00 45.03 2.40
115 116 1.153628 CACGTCCACCGGGAGAATC 60.154 63.158 6.32 0.00 45.03 2.52
116 117 2.104331 CGTCCACCGGGAGAATCG 59.896 66.667 6.32 0.00 46.12 3.34
117 118 2.412323 CGTCCACCGGGAGAATCGA 61.412 63.158 6.32 0.00 46.12 3.59
118 119 1.895238 GTCCACCGGGAGAATCGAA 59.105 57.895 6.32 0.00 46.12 3.71
119 120 0.248289 GTCCACCGGGAGAATCGAAA 59.752 55.000 6.32 0.00 46.12 3.46
120 121 0.535335 TCCACCGGGAGAATCGAAAG 59.465 55.000 6.32 0.00 38.64 2.62
121 122 0.462047 CCACCGGGAGAATCGAAAGG 60.462 60.000 6.32 0.00 35.59 3.11
122 123 0.535335 CACCGGGAGAATCGAAAGGA 59.465 55.000 6.32 0.00 34.37 3.36
123 124 1.066430 CACCGGGAGAATCGAAAGGAA 60.066 52.381 6.32 0.00 34.37 3.36
124 125 1.626825 ACCGGGAGAATCGAAAGGAAA 59.373 47.619 6.32 0.00 34.37 3.13
125 126 2.280628 CCGGGAGAATCGAAAGGAAAG 58.719 52.381 0.00 0.00 34.37 2.62
126 127 2.280628 CGGGAGAATCGAAAGGAAAGG 58.719 52.381 0.00 0.00 34.37 3.11
127 128 2.093658 CGGGAGAATCGAAAGGAAAGGA 60.094 50.000 0.00 0.00 34.37 3.36
128 129 3.618997 CGGGAGAATCGAAAGGAAAGGAA 60.619 47.826 0.00 0.00 34.37 3.36
129 130 4.332828 GGGAGAATCGAAAGGAAAGGAAA 58.667 43.478 0.00 0.00 34.37 3.13
130 131 4.156190 GGGAGAATCGAAAGGAAAGGAAAC 59.844 45.833 0.00 0.00 34.37 2.78
131 132 4.142881 GGAGAATCGAAAGGAAAGGAAACG 60.143 45.833 0.00 0.00 34.37 3.60
132 133 3.188667 AGAATCGAAAGGAAAGGAAACGC 59.811 43.478 0.00 0.00 0.00 4.84
133 134 1.232119 TCGAAAGGAAAGGAAACGCC 58.768 50.000 0.00 0.00 0.00 5.68
134 135 0.240145 CGAAAGGAAAGGAAACGCCC 59.760 55.000 0.00 0.00 37.37 6.13
135 136 0.601558 GAAAGGAAAGGAAACGCCCC 59.398 55.000 0.00 0.00 37.37 5.80
136 137 0.105913 AAAGGAAAGGAAACGCCCCA 60.106 50.000 0.00 0.00 37.37 4.96
137 138 0.826256 AAGGAAAGGAAACGCCCCAC 60.826 55.000 0.00 0.00 37.37 4.61
138 139 2.273179 GGAAAGGAAACGCCCCACC 61.273 63.158 0.00 0.00 37.37 4.61
139 140 2.596338 AAAGGAAACGCCCCACCG 60.596 61.111 0.00 0.00 37.37 4.94
151 152 3.470888 CCACCGCCACCCTCCTAG 61.471 72.222 0.00 0.00 0.00 3.02
152 153 3.470888 CACCGCCACCCTCCTAGG 61.471 72.222 0.82 0.82 34.30 3.02
161 162 4.514577 CCTCCTAGGGCACGCACG 62.515 72.222 9.46 0.00 0.00 5.34
162 163 4.514577 CTCCTAGGGCACGCACGG 62.515 72.222 9.46 0.00 0.00 4.94
165 166 4.760047 CTAGGGCACGCACGGCTT 62.760 66.667 0.00 0.00 0.00 4.35
166 167 4.752879 TAGGGCACGCACGGCTTC 62.753 66.667 0.00 0.00 0.00 3.86
210 211 4.779733 GGCGAGGGAGGAGGTGGA 62.780 72.222 0.00 0.00 0.00 4.02
211 212 2.683933 GCGAGGGAGGAGGTGGAA 60.684 66.667 0.00 0.00 0.00 3.53
212 213 2.726351 GCGAGGGAGGAGGTGGAAG 61.726 68.421 0.00 0.00 0.00 3.46
213 214 1.305381 CGAGGGAGGAGGTGGAAGT 60.305 63.158 0.00 0.00 0.00 3.01
214 215 0.033405 CGAGGGAGGAGGTGGAAGTA 60.033 60.000 0.00 0.00 0.00 2.24
215 216 1.783071 GAGGGAGGAGGTGGAAGTAG 58.217 60.000 0.00 0.00 0.00 2.57
216 217 1.007359 GAGGGAGGAGGTGGAAGTAGT 59.993 57.143 0.00 0.00 0.00 2.73
217 218 1.007359 AGGGAGGAGGTGGAAGTAGTC 59.993 57.143 0.00 0.00 0.00 2.59
225 226 2.493501 GGAAGTAGTCCCGGCGAC 59.506 66.667 9.30 13.42 41.10 5.19
239 240 2.433664 CGACGCGGCTAGGGTTTT 60.434 61.111 11.76 0.00 46.65 2.43
240 241 2.450345 CGACGCGGCTAGGGTTTTC 61.450 63.158 11.76 0.00 46.65 2.29
241 242 2.046604 ACGCGGCTAGGGTTTTCC 60.047 61.111 12.47 0.00 44.10 3.13
251 252 2.732016 GGTTTTCCCCCGTGTTGC 59.268 61.111 0.00 0.00 0.00 4.17
252 253 2.732016 GTTTTCCCCCGTGTTGCC 59.268 61.111 0.00 0.00 0.00 4.52
253 254 2.128507 GTTTTCCCCCGTGTTGCCA 61.129 57.895 0.00 0.00 0.00 4.92
254 255 1.830408 TTTTCCCCCGTGTTGCCAG 60.830 57.895 0.00 0.00 0.00 4.85
255 256 2.285889 TTTTCCCCCGTGTTGCCAGA 62.286 55.000 0.00 0.00 0.00 3.86
256 257 2.690653 TTTCCCCCGTGTTGCCAGAG 62.691 60.000 0.00 0.00 0.00 3.35
257 258 4.722700 CCCCCGTGTTGCCAGAGG 62.723 72.222 0.00 0.00 0.00 3.69
258 259 3.636231 CCCCGTGTTGCCAGAGGA 61.636 66.667 0.00 0.00 0.00 3.71
259 260 2.046892 CCCGTGTTGCCAGAGGAG 60.047 66.667 0.00 0.00 0.00 3.69
260 261 2.046892 CCGTGTTGCCAGAGGAGG 60.047 66.667 0.00 0.00 0.00 4.30
261 262 2.046892 CGTGTTGCCAGAGGAGGG 60.047 66.667 0.00 0.00 0.00 4.30
268 269 4.020617 CCAGAGGAGGGCAACGCA 62.021 66.667 0.00 0.00 37.60 5.24
269 270 2.270205 CAGAGGAGGGCAACGCAT 59.730 61.111 0.00 0.00 37.60 4.73
270 271 2.110967 CAGAGGAGGGCAACGCATG 61.111 63.158 0.00 0.00 37.60 4.06
271 272 2.045926 GAGGAGGGCAACGCATGT 60.046 61.111 0.00 0.00 37.60 3.21
272 273 1.675641 GAGGAGGGCAACGCATGTT 60.676 57.895 0.00 0.00 39.43 2.71
280 281 4.920828 AACGCATGTTGTCCCCTT 57.079 50.000 0.00 0.00 36.81 3.95
281 282 3.125520 AACGCATGTTGTCCCCTTT 57.874 47.368 0.00 0.00 36.81 3.11
282 283 1.408969 AACGCATGTTGTCCCCTTTT 58.591 45.000 0.00 0.00 36.81 2.27
283 284 2.279935 ACGCATGTTGTCCCCTTTTA 57.720 45.000 0.00 0.00 0.00 1.52
284 285 2.588620 ACGCATGTTGTCCCCTTTTAA 58.411 42.857 0.00 0.00 0.00 1.52
285 286 3.161866 ACGCATGTTGTCCCCTTTTAAT 58.838 40.909 0.00 0.00 0.00 1.40
286 287 3.056891 ACGCATGTTGTCCCCTTTTAATG 60.057 43.478 0.00 0.00 0.00 1.90
287 288 3.056891 CGCATGTTGTCCCCTTTTAATGT 60.057 43.478 0.00 0.00 0.00 2.71
288 289 4.244862 GCATGTTGTCCCCTTTTAATGTG 58.755 43.478 0.00 0.00 0.00 3.21
289 290 4.819769 CATGTTGTCCCCTTTTAATGTGG 58.180 43.478 0.00 0.00 0.00 4.17
290 291 4.186077 TGTTGTCCCCTTTTAATGTGGA 57.814 40.909 0.00 0.00 0.00 4.02
291 292 4.746466 TGTTGTCCCCTTTTAATGTGGAT 58.254 39.130 0.00 0.00 0.00 3.41
292 293 4.526262 TGTTGTCCCCTTTTAATGTGGATG 59.474 41.667 0.00 0.00 0.00 3.51
293 294 4.396357 TGTCCCCTTTTAATGTGGATGT 57.604 40.909 0.00 0.00 0.00 3.06
294 295 5.522315 TGTCCCCTTTTAATGTGGATGTA 57.478 39.130 0.00 0.00 0.00 2.29
295 296 5.893500 TGTCCCCTTTTAATGTGGATGTAA 58.106 37.500 0.00 0.00 0.00 2.41
296 297 6.498538 TGTCCCCTTTTAATGTGGATGTAAT 58.501 36.000 0.00 0.00 0.00 1.89
297 298 7.644062 TGTCCCCTTTTAATGTGGATGTAATA 58.356 34.615 0.00 0.00 0.00 0.98
298 299 8.116669 TGTCCCCTTTTAATGTGGATGTAATAA 58.883 33.333 0.00 0.00 0.00 1.40
299 300 8.630037 GTCCCCTTTTAATGTGGATGTAATAAG 58.370 37.037 0.00 0.00 0.00 1.73
300 301 8.561769 TCCCCTTTTAATGTGGATGTAATAAGA 58.438 33.333 0.00 0.00 0.00 2.10
301 302 9.196139 CCCCTTTTAATGTGGATGTAATAAGAA 57.804 33.333 0.00 0.00 0.00 2.52
310 311 8.862325 TGTGGATGTAATAAGAAATGTTGACT 57.138 30.769 0.00 0.00 0.00 3.41
311 312 9.952030 TGTGGATGTAATAAGAAATGTTGACTA 57.048 29.630 0.00 0.00 0.00 2.59
322 323 7.878477 AGAAATGTTGACTATTGTGCATTTG 57.122 32.000 14.03 0.00 36.89 2.32
323 324 7.436118 AGAAATGTTGACTATTGTGCATTTGT 58.564 30.769 14.03 9.94 36.89 2.83
324 325 7.927629 AGAAATGTTGACTATTGTGCATTTGTT 59.072 29.630 14.03 5.13 36.89 2.83
325 326 8.436046 AAATGTTGACTATTGTGCATTTGTTT 57.564 26.923 0.00 0.00 35.88 2.83
326 327 8.436046 AATGTTGACTATTGTGCATTTGTTTT 57.564 26.923 0.00 0.00 0.00 2.43
327 328 7.231705 TGTTGACTATTGTGCATTTGTTTTG 57.768 32.000 0.00 0.00 0.00 2.44
328 329 6.257411 TGTTGACTATTGTGCATTTGTTTTGG 59.743 34.615 0.00 0.00 0.00 3.28
329 330 5.911752 TGACTATTGTGCATTTGTTTTGGT 58.088 33.333 0.00 0.00 0.00 3.67
330 331 5.752472 TGACTATTGTGCATTTGTTTTGGTG 59.248 36.000 0.00 0.00 0.00 4.17
331 332 5.055812 ACTATTGTGCATTTGTTTTGGTGG 58.944 37.500 0.00 0.00 0.00 4.61
332 333 3.340814 TTGTGCATTTGTTTTGGTGGT 57.659 38.095 0.00 0.00 0.00 4.16
333 334 3.340814 TGTGCATTTGTTTTGGTGGTT 57.659 38.095 0.00 0.00 0.00 3.67
334 335 3.005554 TGTGCATTTGTTTTGGTGGTTG 58.994 40.909 0.00 0.00 0.00 3.77
335 336 2.012673 TGCATTTGTTTTGGTGGTTGC 58.987 42.857 0.00 0.00 0.00 4.17
336 337 2.012673 GCATTTGTTTTGGTGGTTGCA 58.987 42.857 0.00 0.00 0.00 4.08
337 338 2.421424 GCATTTGTTTTGGTGGTTGCAA 59.579 40.909 0.00 0.00 0.00 4.08
338 339 3.066481 GCATTTGTTTTGGTGGTTGCAAT 59.934 39.130 0.59 0.00 0.00 3.56
339 340 4.439837 GCATTTGTTTTGGTGGTTGCAATT 60.440 37.500 0.59 0.00 0.00 2.32
340 341 4.954092 TTTGTTTTGGTGGTTGCAATTC 57.046 36.364 0.59 0.00 0.00 2.17
341 342 3.616956 TGTTTTGGTGGTTGCAATTCA 57.383 38.095 0.59 1.43 0.00 2.57
342 343 3.265791 TGTTTTGGTGGTTGCAATTCAC 58.734 40.909 20.65 20.65 0.00 3.18
343 344 3.055530 TGTTTTGGTGGTTGCAATTCACT 60.056 39.130 24.84 0.00 0.00 3.41
344 345 3.902881 TTTGGTGGTTGCAATTCACTT 57.097 38.095 24.84 0.00 0.00 3.16
345 346 3.902881 TTGGTGGTTGCAATTCACTTT 57.097 38.095 24.84 0.00 0.00 2.66
346 347 3.451141 TGGTGGTTGCAATTCACTTTC 57.549 42.857 24.84 14.84 0.00 2.62
347 348 2.762887 TGGTGGTTGCAATTCACTTTCA 59.237 40.909 24.84 16.51 0.00 2.69
348 349 3.387374 TGGTGGTTGCAATTCACTTTCAT 59.613 39.130 24.84 0.00 0.00 2.57
349 350 3.742369 GGTGGTTGCAATTCACTTTCATG 59.258 43.478 24.84 0.00 0.00 3.07
430 431 2.812619 GCTAGCAGGGGCCGAATCT 61.813 63.158 10.63 0.00 42.56 2.40
434 435 0.846693 AGCAGGGGCCGAATCTAAAT 59.153 50.000 0.00 0.00 42.56 1.40
440 441 2.615747 GGGGCCGAATCTAAATAGCTCC 60.616 54.545 0.00 0.00 32.89 4.70
446 447 6.109359 GCCGAATCTAAATAGCTCCATACAT 58.891 40.000 0.00 0.00 0.00 2.29
458 459 3.071602 GCTCCATACATACCCACAGTCAT 59.928 47.826 0.00 0.00 0.00 3.06
465 466 1.344065 TACCCACAGTCATCCGTTGT 58.656 50.000 0.00 0.00 0.00 3.32
467 468 1.014044 CCCACAGTCATCCGTTGTCG 61.014 60.000 0.00 0.00 0.00 4.35
468 469 0.038618 CCACAGTCATCCGTTGTCGA 60.039 55.000 0.00 0.00 39.71 4.20
472 473 1.927174 CAGTCATCCGTTGTCGATTCC 59.073 52.381 0.00 0.00 39.71 3.01
474 475 2.233922 AGTCATCCGTTGTCGATTCCTT 59.766 45.455 0.00 0.00 39.71 3.36
477 479 2.363788 TCCGTTGTCGATTCCTTCAG 57.636 50.000 0.00 0.00 39.71 3.02
487 489 5.582269 TGTCGATTCCTTCAGACAAATGATC 59.418 40.000 0.00 0.00 40.19 2.92
494 496 3.417069 TCAGACAAATGATCCGTGGTT 57.583 42.857 0.00 0.00 0.00 3.67
508 1662 3.940221 TCCGTGGTTAAATTTACCCATCG 59.060 43.478 16.53 18.56 34.66 3.84
509 1663 3.690628 CCGTGGTTAAATTTACCCATCGT 59.309 43.478 16.53 0.00 34.66 3.73
511 1665 4.201841 CGTGGTTAAATTTACCCATCGTCC 60.202 45.833 16.53 3.99 34.66 4.79
512 1666 4.096833 GTGGTTAAATTTACCCATCGTCCC 59.903 45.833 16.53 0.70 34.66 4.46
515 1669 2.430248 AATTTACCCATCGTCCCCAC 57.570 50.000 0.00 0.00 0.00 4.61
528 1682 2.294979 GTCCCCACGAAACTCTTTGTT 58.705 47.619 0.00 0.00 41.29 2.83
534 1688 6.097129 TCCCCACGAAACTCTTTGTTAATTTT 59.903 34.615 0.00 0.00 38.03 1.82
586 1742 4.683129 GCATTTGGAAATAACCCCCATGAC 60.683 45.833 0.00 0.00 0.00 3.06
608 1764 6.509317 ACATTTTGTCATTGTTAACTTGCG 57.491 33.333 7.22 0.00 0.00 4.85
612 1768 9.335891 CATTTTGTCATTGTTAACTTGCGTATA 57.664 29.630 7.22 0.00 0.00 1.47
653 1809 0.535335 ATGACGGGCACTACAATCGT 59.465 50.000 0.00 0.00 36.74 3.73
678 1834 1.742831 GCTTGATGGGCACATAAACGA 59.257 47.619 0.00 0.00 37.47 3.85
682 1838 3.351740 TGATGGGCACATAAACGAACAT 58.648 40.909 0.00 0.00 37.47 2.71
696 1858 1.588674 GAACATGGACACGGACACAA 58.411 50.000 0.00 0.00 0.00 3.33
717 1879 1.739466 CCACGTCCCAATCATCACTTG 59.261 52.381 0.00 0.00 0.00 3.16
776 1938 1.486310 TCAAATCCTCGTCCATCCCTG 59.514 52.381 0.00 0.00 0.00 4.45
783 1945 0.904865 TCGTCCATCCCTGCTGTTCT 60.905 55.000 0.00 0.00 0.00 3.01
788 1950 3.879892 GTCCATCCCTGCTGTTCTAATTC 59.120 47.826 0.00 0.00 0.00 2.17
790 1952 3.217626 CATCCCTGCTGTTCTAATTCCC 58.782 50.000 0.00 0.00 0.00 3.97
791 1953 2.274542 TCCCTGCTGTTCTAATTCCCA 58.725 47.619 0.00 0.00 0.00 4.37
792 1954 2.852449 TCCCTGCTGTTCTAATTCCCAT 59.148 45.455 0.00 0.00 0.00 4.00
793 1955 3.117888 TCCCTGCTGTTCTAATTCCCATC 60.118 47.826 0.00 0.00 0.00 3.51
796 1958 4.891756 CCTGCTGTTCTAATTCCCATCAAT 59.108 41.667 0.00 0.00 0.00 2.57
799 1961 4.279420 GCTGTTCTAATTCCCATCAATCCC 59.721 45.833 0.00 0.00 0.00 3.85
800 1962 4.460263 TGTTCTAATTCCCATCAATCCCG 58.540 43.478 0.00 0.00 0.00 5.14
801 1963 4.080015 TGTTCTAATTCCCATCAATCCCGT 60.080 41.667 0.00 0.00 0.00 5.28
802 1964 4.788925 TCTAATTCCCATCAATCCCGTT 57.211 40.909 0.00 0.00 0.00 4.44
886 2066 1.817447 CTTCCGAAACCCGACTACTCT 59.183 52.381 0.00 0.00 41.76 3.24
887 2067 1.457346 TCCGAAACCCGACTACTCTC 58.543 55.000 0.00 0.00 41.76 3.20
907 2088 1.935873 CTCTATCACGTGGCAACCATG 59.064 52.381 17.00 4.27 45.34 3.66
1089 2270 2.676822 TTCCTCGTCCTGCTCGCT 60.677 61.111 0.00 0.00 0.00 4.93
1338 2519 2.040278 CTGGAGGAGAGGGGTGCT 59.960 66.667 0.00 0.00 0.00 4.40
1463 2644 1.065928 GCTCCCAGGTACGTGATCG 59.934 63.158 16.93 5.54 43.34 3.69
1479 2660 3.126514 GTGATCGATCCATTGATCCATGC 59.873 47.826 22.31 0.00 43.87 4.06
1500 2681 1.407258 CCGCTAGTTCCTCTTCCTCTG 59.593 57.143 0.00 0.00 0.00 3.35
1501 2682 2.370349 CGCTAGTTCCTCTTCCTCTGA 58.630 52.381 0.00 0.00 0.00 3.27
1521 2702 8.139989 CCTCTGATCTTGTTCTTGTTTCATTTT 58.860 33.333 0.00 0.00 0.00 1.82
1557 2738 7.396540 TTTATTTCTCCTCTCAAATCTTGCC 57.603 36.000 0.00 0.00 0.00 4.52
1580 2764 4.000325 ACAAATCAATAGTGCACGCTACA 59.000 39.130 12.01 0.00 0.00 2.74
1635 2819 5.738619 ACTCAACCATACACACATCTACA 57.261 39.130 0.00 0.00 0.00 2.74
1659 2843 8.077386 ACAAAATGCAAATTTATTTTCTGCTGG 58.923 29.630 8.17 1.73 35.07 4.85
1743 2929 3.056749 AGCTTCCCAGTAGTACAGAAACG 60.057 47.826 2.52 0.00 0.00 3.60
1802 2996 1.063912 CTTCAACGCTTGTGCTGTCAA 59.936 47.619 0.00 0.00 36.97 3.18
1932 3126 5.637006 TGCCACATGTTATTGTTCTAACC 57.363 39.130 0.00 0.00 31.83 2.85
1933 3127 5.073428 TGCCACATGTTATTGTTCTAACCA 58.927 37.500 0.00 0.00 31.83 3.67
2013 3209 9.781834 GCTTGATGCTATACTATTCTACTACTG 57.218 37.037 0.00 0.00 38.95 2.74
2030 3226 6.158023 ACTACTGTACTTTGCTTGTAGTGT 57.842 37.500 0.00 0.00 39.03 3.55
2051 3247 4.100035 TGTCGTCTCATCTGCTCCATATTT 59.900 41.667 0.00 0.00 0.00 1.40
2105 3301 2.179427 TGGAGCTTTCTGCACTAGCTA 58.821 47.619 11.30 0.00 44.78 3.32
2106 3302 2.167281 TGGAGCTTTCTGCACTAGCTAG 59.833 50.000 19.44 19.44 44.78 3.42
2223 3419 2.797177 ACTTGCTGAAGAGATTCCCC 57.203 50.000 0.00 0.00 32.98 4.81
2270 3466 0.537143 TTCATGTGAGTGGCGGCTTT 60.537 50.000 11.43 0.00 0.00 3.51
2399 3606 1.631405 TCATGGCCTGGTTTTCAAGG 58.369 50.000 3.32 0.00 0.00 3.61
2461 3668 6.288294 CAATCCCCAGACTGTCGAATTAATA 58.712 40.000 1.52 0.00 0.00 0.98
2462 3669 6.688073 ATCCCCAGACTGTCGAATTAATAT 57.312 37.500 1.52 0.00 0.00 1.28
2565 3772 2.033747 CGCATAGTGTTGATTGTAGCGG 60.034 50.000 0.00 0.00 39.07 5.52
2790 3997 4.529109 AACCAGAGAGCTGAAGTAACTC 57.471 45.455 0.00 0.00 45.17 3.01
2857 4064 3.377172 ACTTGTCGAGAAAACAGTTTGGG 59.623 43.478 0.00 0.00 0.00 4.12
2877 4085 4.720773 TGGGGTATACTTGTCGGGAAATAA 59.279 41.667 2.25 0.00 0.00 1.40
2964 4172 1.922447 TCAGGTAGCAATGGGACCATT 59.078 47.619 10.71 10.71 46.35 3.16
3117 4325 0.753262 GGACAGTGCATCCGGTCTAT 59.247 55.000 0.00 0.00 0.00 1.98
3216 4424 8.458573 TTTCTTCTAAAACCATAAGCTGACAA 57.541 30.769 0.00 0.00 0.00 3.18
3219 4427 3.915437 AAAACCATAAGCTGACAACGG 57.085 42.857 0.00 0.00 0.00 4.44
3221 4429 2.851263 ACCATAAGCTGACAACGGAA 57.149 45.000 0.00 0.00 0.00 4.30
3247 4455 7.731882 TTTAATGTTCAGAAACGTGGTGATA 57.268 32.000 0.00 0.00 38.28 2.15
3254 4462 5.556915 TCAGAAACGTGGTGATAAAGGATT 58.443 37.500 0.00 0.00 0.00 3.01
3314 4522 1.547372 GCATTGATCCAGGTTTGTGCT 59.453 47.619 0.00 0.00 0.00 4.40
3329 4669 6.491403 AGGTTTGTGCTCTTAAATTGACAGAT 59.509 34.615 0.00 0.00 0.00 2.90
3337 4677 7.094634 TGCTCTTAAATTGACAGATTGTTCTCC 60.095 37.037 0.00 0.00 0.00 3.71
3346 4686 5.053978 ACAGATTGTTCTCCCTCAAAACT 57.946 39.130 0.00 0.00 0.00 2.66
3347 4687 4.823989 ACAGATTGTTCTCCCTCAAAACTG 59.176 41.667 0.00 0.00 37.66 3.16
3348 4688 3.823304 AGATTGTTCTCCCTCAAAACTGC 59.177 43.478 0.00 0.00 0.00 4.40
3349 4689 2.727123 TGTTCTCCCTCAAAACTGCA 57.273 45.000 0.00 0.00 0.00 4.41
3350 4690 3.011566 TGTTCTCCCTCAAAACTGCAA 57.988 42.857 0.00 0.00 0.00 4.08
3351 4691 2.687935 TGTTCTCCCTCAAAACTGCAAC 59.312 45.455 0.00 0.00 0.00 4.17
3352 4692 2.952310 GTTCTCCCTCAAAACTGCAACT 59.048 45.455 0.00 0.00 0.00 3.16
3353 4693 2.851195 TCTCCCTCAAAACTGCAACTC 58.149 47.619 0.00 0.00 0.00 3.01
3354 4694 2.439507 TCTCCCTCAAAACTGCAACTCT 59.560 45.455 0.00 0.00 0.00 3.24
3355 4695 3.117888 TCTCCCTCAAAACTGCAACTCTT 60.118 43.478 0.00 0.00 0.00 2.85
3356 4696 2.951642 TCCCTCAAAACTGCAACTCTTG 59.048 45.455 0.00 0.00 0.00 3.02
3370 4710 4.427312 CAACTCTTGCCAATGCTAATTCC 58.573 43.478 0.00 0.00 38.71 3.01
3371 4711 2.684881 ACTCTTGCCAATGCTAATTCCG 59.315 45.455 0.00 0.00 38.71 4.30
3372 4712 2.945008 CTCTTGCCAATGCTAATTCCGA 59.055 45.455 0.00 0.00 38.71 4.55
3373 4713 3.351740 TCTTGCCAATGCTAATTCCGAA 58.648 40.909 0.00 0.00 38.71 4.30
3374 4714 3.128589 TCTTGCCAATGCTAATTCCGAAC 59.871 43.478 0.00 0.00 38.71 3.95
3375 4715 2.441410 TGCCAATGCTAATTCCGAACA 58.559 42.857 0.00 0.00 38.71 3.18
3376 4716 3.023119 TGCCAATGCTAATTCCGAACAT 58.977 40.909 0.00 0.00 38.71 2.71
3377 4717 3.181488 TGCCAATGCTAATTCCGAACATG 60.181 43.478 0.00 0.00 38.71 3.21
3378 4718 3.796504 GCCAATGCTAATTCCGAACATGG 60.797 47.826 0.00 0.00 33.53 3.66
3379 4719 3.374745 CAATGCTAATTCCGAACATGGC 58.625 45.455 0.00 0.00 0.00 4.40
3380 4720 1.388547 TGCTAATTCCGAACATGGCC 58.611 50.000 0.00 0.00 0.00 5.36
3381 4721 0.668535 GCTAATTCCGAACATGGCCC 59.331 55.000 0.00 0.00 0.00 5.80
3382 4722 0.944386 CTAATTCCGAACATGGCCCG 59.056 55.000 0.00 0.00 0.00 6.13
3383 4723 0.253610 TAATTCCGAACATGGCCCGT 59.746 50.000 0.00 0.00 0.00 5.28
3384 4724 1.029947 AATTCCGAACATGGCCCGTC 61.030 55.000 0.00 0.00 0.00 4.79
3385 4725 2.191786 ATTCCGAACATGGCCCGTCA 62.192 55.000 0.00 0.00 0.00 4.35
3386 4726 3.124921 CCGAACATGGCCCGTCAC 61.125 66.667 0.00 0.00 0.00 3.67
3387 4727 2.047274 CGAACATGGCCCGTCACT 60.047 61.111 0.00 0.00 0.00 3.41
3388 4728 2.390599 CGAACATGGCCCGTCACTG 61.391 63.158 0.00 0.00 0.00 3.66
3389 4729 1.003839 GAACATGGCCCGTCACTGA 60.004 57.895 0.00 0.00 0.00 3.41
3390 4730 0.392998 GAACATGGCCCGTCACTGAT 60.393 55.000 0.00 0.00 0.00 2.90
3391 4731 0.038166 AACATGGCCCGTCACTGATT 59.962 50.000 0.00 0.00 0.00 2.57
3392 4732 0.038166 ACATGGCCCGTCACTGATTT 59.962 50.000 0.00 0.00 0.00 2.17
3393 4733 0.452987 CATGGCCCGTCACTGATTTG 59.547 55.000 0.00 0.00 0.00 2.32
3394 4734 0.680921 ATGGCCCGTCACTGATTTGG 60.681 55.000 0.00 0.00 0.00 3.28
3395 4735 2.046285 GGCCCGTCACTGATTTGGG 61.046 63.158 0.00 8.82 43.02 4.12
3396 4736 1.303317 GCCCGTCACTGATTTGGGT 60.303 57.895 12.91 0.00 42.10 4.51
3397 4737 0.035820 GCCCGTCACTGATTTGGGTA 60.036 55.000 12.91 0.00 42.10 3.69
3398 4738 1.408266 GCCCGTCACTGATTTGGGTAT 60.408 52.381 12.91 0.00 42.10 2.73
3399 4739 2.288666 CCCGTCACTGATTTGGGTATG 58.711 52.381 6.01 0.00 35.05 2.39
3400 4740 2.093181 CCCGTCACTGATTTGGGTATGA 60.093 50.000 6.01 0.00 35.05 2.15
3401 4741 3.605634 CCGTCACTGATTTGGGTATGAA 58.394 45.455 0.00 0.00 0.00 2.57
3402 4742 4.199310 CCGTCACTGATTTGGGTATGAAT 58.801 43.478 0.00 0.00 0.00 2.57
3403 4743 5.364778 CCGTCACTGATTTGGGTATGAATA 58.635 41.667 0.00 0.00 0.00 1.75
3404 4744 5.466728 CCGTCACTGATTTGGGTATGAATAG 59.533 44.000 0.00 0.00 0.00 1.73
3405 4745 5.050091 CGTCACTGATTTGGGTATGAATAGC 60.050 44.000 0.00 0.00 0.00 2.97
3406 4746 5.822519 GTCACTGATTTGGGTATGAATAGCA 59.177 40.000 2.26 0.00 32.63 3.49
3407 4747 6.017605 GTCACTGATTTGGGTATGAATAGCAG 60.018 42.308 2.26 0.00 32.63 4.24
3408 4748 5.240183 CACTGATTTGGGTATGAATAGCAGG 59.760 44.000 0.00 0.00 32.63 4.85
3409 4749 4.144297 TGATTTGGGTATGAATAGCAGGC 58.856 43.478 2.26 0.00 32.63 4.85
3410 4750 2.656947 TTGGGTATGAATAGCAGGCC 57.343 50.000 0.00 0.00 32.63 5.19
3411 4751 1.819753 TGGGTATGAATAGCAGGCCT 58.180 50.000 0.00 0.00 32.63 5.19
3412 4752 2.984672 TGGGTATGAATAGCAGGCCTA 58.015 47.619 3.98 0.00 32.63 3.93
3413 4753 3.531059 TGGGTATGAATAGCAGGCCTAT 58.469 45.455 3.98 0.00 38.40 2.57
3414 4754 4.694512 TGGGTATGAATAGCAGGCCTATA 58.305 43.478 3.98 1.24 35.70 1.31
3415 4755 5.288687 TGGGTATGAATAGCAGGCCTATAT 58.711 41.667 3.98 4.12 35.70 0.86
3416 4756 5.366768 TGGGTATGAATAGCAGGCCTATATC 59.633 44.000 3.98 0.00 35.70 1.63
3417 4757 5.509840 GGGTATGAATAGCAGGCCTATATCG 60.510 48.000 3.98 0.00 35.70 2.92
3418 4758 5.069251 GGTATGAATAGCAGGCCTATATCGT 59.931 44.000 3.98 4.08 35.70 3.73
3419 4759 5.683876 ATGAATAGCAGGCCTATATCGTT 57.316 39.130 3.98 0.00 35.70 3.85
3420 4760 5.483685 TGAATAGCAGGCCTATATCGTTT 57.516 39.130 3.98 0.00 35.70 3.60
3421 4761 5.865085 TGAATAGCAGGCCTATATCGTTTT 58.135 37.500 3.98 0.00 35.70 2.43
3422 4762 5.932303 TGAATAGCAGGCCTATATCGTTTTC 59.068 40.000 3.98 2.99 35.70 2.29
3423 4763 5.746990 ATAGCAGGCCTATATCGTTTTCT 57.253 39.130 3.98 0.00 34.98 2.52
3424 4764 4.423625 AGCAGGCCTATATCGTTTTCTT 57.576 40.909 3.98 0.00 0.00 2.52
3425 4765 4.781934 AGCAGGCCTATATCGTTTTCTTT 58.218 39.130 3.98 0.00 0.00 2.52
3426 4766 4.816925 AGCAGGCCTATATCGTTTTCTTTC 59.183 41.667 3.98 0.00 0.00 2.62
3427 4767 4.574828 GCAGGCCTATATCGTTTTCTTTCA 59.425 41.667 3.98 0.00 0.00 2.69
3428 4768 5.065988 GCAGGCCTATATCGTTTTCTTTCAA 59.934 40.000 3.98 0.00 0.00 2.69
3429 4769 6.719365 CAGGCCTATATCGTTTTCTTTCAAG 58.281 40.000 3.98 0.00 0.00 3.02
3430 4770 6.316390 CAGGCCTATATCGTTTTCTTTCAAGT 59.684 38.462 3.98 0.00 0.00 3.16
3431 4771 7.494625 CAGGCCTATATCGTTTTCTTTCAAGTA 59.505 37.037 3.98 0.00 0.00 2.24
3432 4772 8.044908 AGGCCTATATCGTTTTCTTTCAAGTAA 58.955 33.333 1.29 0.00 0.00 2.24
3433 4773 8.671028 GGCCTATATCGTTTTCTTTCAAGTAAA 58.329 33.333 0.00 0.00 0.00 2.01
3493 4842 7.656137 AGTTTCGTTTGTACTTCATATGTGACT 59.344 33.333 1.90 0.00 33.11 3.41
3499 4848 5.977635 TGTACTTCATATGTGACTCCTTGG 58.022 41.667 1.90 0.00 33.11 3.61
3500 4849 4.494091 ACTTCATATGTGACTCCTTGGG 57.506 45.455 1.90 0.00 33.11 4.12
3504 4853 4.047166 TCATATGTGACTCCTTGGGGATT 58.953 43.478 1.90 0.00 41.36 3.01
3514 4863 6.068853 TGACTCCTTGGGGATTATGATCTTTT 60.069 38.462 0.00 0.00 41.36 2.27
3763 5112 1.227734 CGGTGTGGGTTTCGGAAGT 60.228 57.895 0.00 0.00 0.00 3.01
3805 5154 3.414700 GTGCTTGTCCGCGACCTG 61.415 66.667 8.23 0.99 0.00 4.00
3829 5178 0.179111 TATGGAACTCTGCTTCCGCG 60.179 55.000 0.00 0.00 42.57 6.46
3856 5205 1.546589 TAAAGACCGATGTGGGGCGT 61.547 55.000 0.00 0.00 41.32 5.68
4003 5352 7.041576 CCGATGATCAGTGACATTCATATTGTT 60.042 37.037 7.53 0.00 0.00 2.83
4132 5481 0.107897 AGATACGGTGGCAATGCGAA 60.108 50.000 0.00 0.00 0.00 4.70
4141 5490 1.737236 TGGCAATGCGAATCTGTGTAC 59.263 47.619 0.00 0.00 0.00 2.90
4180 5529 0.843309 TCCCTGCACCTTGTGAAGAA 59.157 50.000 3.72 0.00 41.52 2.52
4336 5685 5.343249 GCAGATTCAACACTGAAAACTTGT 58.657 37.500 0.00 0.00 44.64 3.16
4416 5765 2.102578 GCAGATGGGCACAGGTAATTT 58.897 47.619 0.00 0.00 0.00 1.82
4429 5778 7.387948 GGCACAGGTAATTTACTGATCGAATAT 59.612 37.037 13.92 0.00 38.09 1.28
4430 5779 9.419297 GCACAGGTAATTTACTGATCGAATATA 57.581 33.333 13.92 0.00 38.09 0.86
4456 5805 3.602205 AGGCAATTATCCTTTCTCCCC 57.398 47.619 0.00 0.00 0.00 4.81
4820 6184 3.554752 CCTGGCCCAAAACATGTTTAGTG 60.555 47.826 23.53 18.06 31.63 2.74
4821 6185 2.366916 TGGCCCAAAACATGTTTAGTGG 59.633 45.455 25.65 25.65 32.78 4.00
4822 6186 2.412870 GCCCAAAACATGTTTAGTGGC 58.587 47.619 28.24 28.24 35.22 5.01
4823 6187 2.671596 CCCAAAACATGTTTAGTGGCG 58.328 47.619 26.61 19.06 32.04 5.69
4824 6188 2.294791 CCCAAAACATGTTTAGTGGCGA 59.705 45.455 26.61 0.00 32.04 5.54
4825 6189 3.243569 CCCAAAACATGTTTAGTGGCGAA 60.244 43.478 26.61 0.00 32.04 4.70
4826 6190 3.980775 CCAAAACATGTTTAGTGGCGAAG 59.019 43.478 23.53 3.57 31.63 3.79
4827 6191 3.425193 CAAAACATGTTTAGTGGCGAAGC 59.575 43.478 23.53 0.00 42.49 3.86
4850 6214 2.969628 CACTATTTGGAGCTCTCGGT 57.030 50.000 14.64 0.65 0.00 4.69
4851 6215 3.252974 CACTATTTGGAGCTCTCGGTT 57.747 47.619 14.64 0.00 0.00 4.44
4852 6216 2.932614 CACTATTTGGAGCTCTCGGTTG 59.067 50.000 14.64 3.42 0.00 3.77
4853 6217 1.936547 CTATTTGGAGCTCTCGGTTGC 59.063 52.381 14.64 0.00 0.00 4.17
4854 6218 0.326264 ATTTGGAGCTCTCGGTTGCT 59.674 50.000 14.64 0.00 42.82 3.91
4859 6223 3.706055 AGCTCTCGGTTGCTCAAAA 57.294 47.368 0.00 0.00 33.90 2.44
4860 6224 1.967319 AGCTCTCGGTTGCTCAAAAA 58.033 45.000 0.00 0.00 33.90 1.94
4889 6253 1.584175 GAGCTCTCGACGTCCAGATA 58.416 55.000 13.44 0.00 0.00 1.98
4892 6256 2.356382 AGCTCTCGACGTCCAGATAAAG 59.644 50.000 13.44 3.28 0.00 1.85
4895 6259 2.022195 CTCGACGTCCAGATAAAGGGA 58.978 52.381 10.58 0.00 0.00 4.20
4909 6273 2.774351 GGGAGGATGGGGTGGAGG 60.774 72.222 0.00 0.00 0.00 4.30
4911 6275 2.774351 GAGGATGGGGTGGAGGGG 60.774 72.222 0.00 0.00 0.00 4.79
4913 6277 4.448340 GGATGGGGTGGAGGGGGA 62.448 72.222 0.00 0.00 0.00 4.81
4914 6278 3.097162 GATGGGGTGGAGGGGGAC 61.097 72.222 0.00 0.00 0.00 4.46
4915 6279 3.637544 ATGGGGTGGAGGGGGACT 61.638 66.667 0.00 0.00 0.00 3.85
4920 6284 3.017581 GTGGAGGGGGACTGGCAT 61.018 66.667 0.00 0.00 0.00 4.40
4921 6285 2.692368 TGGAGGGGGACTGGCATC 60.692 66.667 0.00 0.00 0.00 3.91
4922 6286 2.367512 GGAGGGGGACTGGCATCT 60.368 66.667 0.00 0.00 0.00 2.90
4923 6287 2.447714 GGAGGGGGACTGGCATCTC 61.448 68.421 0.00 0.00 0.00 2.75
4924 6288 1.383803 GAGGGGGACTGGCATCTCT 60.384 63.158 0.00 0.00 0.00 3.10
4925 6289 1.383803 AGGGGGACTGGCATCTCTC 60.384 63.158 0.00 0.00 0.00 3.20
4926 6290 2.447714 GGGGGACTGGCATCTCTCC 61.448 68.421 3.09 3.09 0.00 3.71
4927 6291 1.690633 GGGGACTGGCATCTCTCCA 60.691 63.158 6.39 0.00 0.00 3.86
4928 6292 1.059006 GGGGACTGGCATCTCTCCAT 61.059 60.000 6.39 0.00 32.37 3.41
4929 6293 0.842635 GGGACTGGCATCTCTCCATT 59.157 55.000 0.00 0.00 32.37 3.16
4930 6294 2.050144 GGGACTGGCATCTCTCCATTA 58.950 52.381 0.00 0.00 32.37 1.90
4931 6295 2.641815 GGGACTGGCATCTCTCCATTAT 59.358 50.000 0.00 0.00 32.37 1.28
4932 6296 3.840666 GGGACTGGCATCTCTCCATTATA 59.159 47.826 0.00 0.00 32.37 0.98
4933 6297 4.472833 GGGACTGGCATCTCTCCATTATAT 59.527 45.833 0.00 0.00 32.37 0.86
4934 6298 5.396213 GGGACTGGCATCTCTCCATTATATC 60.396 48.000 0.00 0.00 32.37 1.63
4935 6299 5.336150 ACTGGCATCTCTCCATTATATCG 57.664 43.478 0.00 0.00 32.37 2.92
4936 6300 4.161189 ACTGGCATCTCTCCATTATATCGG 59.839 45.833 0.00 0.00 32.37 4.18
4937 6301 3.452264 TGGCATCTCTCCATTATATCGGG 59.548 47.826 0.00 0.00 0.00 5.14
4938 6302 3.181461 GGCATCTCTCCATTATATCGGGG 60.181 52.174 0.00 0.00 0.00 5.73
4939 6303 3.742640 GCATCTCTCCATTATATCGGGGC 60.743 52.174 0.00 0.00 0.00 5.80
4940 6304 2.100197 TCTCTCCATTATATCGGGGCG 58.900 52.381 0.00 0.00 0.00 6.13
4941 6305 1.137086 CTCTCCATTATATCGGGGCGG 59.863 57.143 0.00 0.00 0.00 6.13
4942 6306 0.178068 CTCCATTATATCGGGGCGGG 59.822 60.000 0.00 0.00 0.00 6.13
4943 6307 1.223487 CCATTATATCGGGGCGGGG 59.777 63.158 0.00 0.00 0.00 5.73
4944 6308 1.223487 CATTATATCGGGGCGGGGG 59.777 63.158 0.00 0.00 0.00 5.40
4945 6309 1.081462 ATTATATCGGGGCGGGGGA 59.919 57.895 0.00 0.00 0.00 4.81
4946 6310 0.981277 ATTATATCGGGGCGGGGGAG 60.981 60.000 0.00 0.00 0.00 4.30
4947 6311 3.612115 TATATCGGGGCGGGGGAGG 62.612 68.421 0.00 0.00 0.00 4.30
4956 6320 2.657237 CGGGGGAGGTCGCATATC 59.343 66.667 0.00 0.00 0.00 1.63
4957 6321 2.657237 GGGGGAGGTCGCATATCG 59.343 66.667 0.00 0.00 40.15 2.92
4958 6322 1.906824 GGGGGAGGTCGCATATCGA 60.907 63.158 0.00 0.00 46.29 3.59
4967 6331 2.368655 TCGCATATCGATGTGGGATG 57.631 50.000 29.54 16.73 43.16 3.51
4968 6332 1.066929 TCGCATATCGATGTGGGATGG 60.067 52.381 29.54 10.90 43.16 3.51
4969 6333 1.066929 CGCATATCGATGTGGGATGGA 60.067 52.381 27.88 0.00 39.49 3.41
4970 6334 2.350522 GCATATCGATGTGGGATGGAC 58.649 52.381 21.72 1.68 35.30 4.02
4971 6335 2.936993 GCATATCGATGTGGGATGGACC 60.937 54.545 21.72 1.00 35.30 4.46
4972 6336 2.398754 TATCGATGTGGGATGGACCT 57.601 50.000 8.54 0.00 38.98 3.85
4973 6337 0.761187 ATCGATGTGGGATGGACCTG 59.239 55.000 0.00 0.00 38.98 4.00
4974 6338 0.617535 TCGATGTGGGATGGACCTGT 60.618 55.000 0.00 0.00 38.98 4.00
4975 6339 0.253044 CGATGTGGGATGGACCTGTT 59.747 55.000 0.00 0.00 38.98 3.16
4976 6340 1.755179 GATGTGGGATGGACCTGTTG 58.245 55.000 0.00 0.00 38.98 3.33
5081 7033 5.127031 AGGTGGTGGTTTATGTATGAAATGC 59.873 40.000 0.00 0.00 0.00 3.56
5108 7060 4.979197 GCATTCTAGAACTGATACTGGTCG 59.021 45.833 7.48 0.00 0.00 4.79
5125 7077 1.135517 GTCGAGAGGAGTCTGACTTGC 60.136 57.143 12.27 4.75 32.46 4.01
5127 7079 0.885196 GAGAGGAGTCTGACTTGCGT 59.115 55.000 12.27 1.58 30.97 5.24
5131 7083 3.628487 AGAGGAGTCTGACTTGCGTATAC 59.372 47.826 12.27 0.00 0.00 1.47
5149 7101 5.332355 CGTATACGCTGATACTTCCTTTTGC 60.332 44.000 13.08 0.00 31.24 3.68
5193 7145 2.702478 TGCTCATGAGGGGATAGTTCAG 59.298 50.000 23.89 0.00 0.00 3.02
5202 7154 3.852578 AGGGGATAGTTCAGGTTTGATGT 59.147 43.478 0.00 0.00 32.27 3.06
5203 7155 5.036916 AGGGGATAGTTCAGGTTTGATGTA 58.963 41.667 0.00 0.00 32.27 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.785453 GCCCTTCTCGGTGGCTGG 62.785 72.222 0.00 0.00 42.01 4.85
5 6 4.821589 GAGGCGCCCTTCTCGGTG 62.822 72.222 26.15 0.00 31.76 4.94
57 58 3.499737 GGATCCGGTTGTGCGCAG 61.500 66.667 12.22 0.00 0.00 5.18
58 59 4.321966 TGGATCCGGTTGTGCGCA 62.322 61.111 5.66 5.66 0.00 6.09
59 60 3.799755 GTGGATCCGGTTGTGCGC 61.800 66.667 7.39 0.00 0.00 6.09
60 61 3.124921 GGTGGATCCGGTTGTGCG 61.125 66.667 7.39 0.00 0.00 5.34
61 62 1.602323 TTGGTGGATCCGGTTGTGC 60.602 57.895 7.39 0.00 39.52 4.57
62 63 1.241315 GGTTGGTGGATCCGGTTGTG 61.241 60.000 7.39 0.00 39.52 3.33
63 64 1.074248 GGTTGGTGGATCCGGTTGT 59.926 57.895 7.39 0.00 39.52 3.32
64 65 2.038269 CGGTTGGTGGATCCGGTTG 61.038 63.158 7.39 0.00 40.49 3.77
65 66 2.349755 CGGTTGGTGGATCCGGTT 59.650 61.111 7.39 0.00 40.49 4.44
66 67 4.404098 GCGGTTGGTGGATCCGGT 62.404 66.667 7.39 0.00 43.77 5.28
75 76 4.814294 GATCTCGCGGCGGTTGGT 62.814 66.667 23.46 9.42 0.00 3.67
86 87 4.570663 GGACGTGGGCGGATCTCG 62.571 72.222 0.00 0.00 43.45 4.04
87 88 3.458163 TGGACGTGGGCGGATCTC 61.458 66.667 0.00 0.00 43.45 2.75
88 89 3.771160 GTGGACGTGGGCGGATCT 61.771 66.667 0.00 0.00 43.45 2.75
89 90 4.832608 GGTGGACGTGGGCGGATC 62.833 72.222 0.00 0.00 43.45 3.36
96 97 2.573609 GATTCTCCCGGTGGACGTGG 62.574 65.000 0.00 0.00 42.24 4.94
97 98 1.153628 GATTCTCCCGGTGGACGTG 60.154 63.158 0.00 0.00 42.24 4.49
98 99 2.707849 CGATTCTCCCGGTGGACGT 61.708 63.158 0.00 0.00 42.24 4.34
99 100 1.940883 TTCGATTCTCCCGGTGGACG 61.941 60.000 0.00 0.00 43.80 4.79
100 101 0.248289 TTTCGATTCTCCCGGTGGAC 59.752 55.000 0.00 0.00 35.03 4.02
101 102 0.535335 CTTTCGATTCTCCCGGTGGA 59.465 55.000 0.00 0.00 38.75 4.02
102 103 0.462047 CCTTTCGATTCTCCCGGTGG 60.462 60.000 0.00 0.00 0.00 4.61
103 104 0.535335 TCCTTTCGATTCTCCCGGTG 59.465 55.000 0.00 0.00 0.00 4.94
104 105 1.272807 TTCCTTTCGATTCTCCCGGT 58.727 50.000 0.00 0.00 0.00 5.28
105 106 2.280628 CTTTCCTTTCGATTCTCCCGG 58.719 52.381 0.00 0.00 0.00 5.73
106 107 2.093658 TCCTTTCCTTTCGATTCTCCCG 60.094 50.000 0.00 0.00 0.00 5.14
107 108 3.629142 TCCTTTCCTTTCGATTCTCCC 57.371 47.619 0.00 0.00 0.00 4.30
108 109 4.142881 CGTTTCCTTTCCTTTCGATTCTCC 60.143 45.833 0.00 0.00 0.00 3.71
109 110 4.669453 GCGTTTCCTTTCCTTTCGATTCTC 60.669 45.833 0.00 0.00 0.00 2.87
110 111 3.188667 GCGTTTCCTTTCCTTTCGATTCT 59.811 43.478 0.00 0.00 0.00 2.40
111 112 3.489444 GCGTTTCCTTTCCTTTCGATTC 58.511 45.455 0.00 0.00 0.00 2.52
112 113 2.228103 GGCGTTTCCTTTCCTTTCGATT 59.772 45.455 0.00 0.00 0.00 3.34
113 114 1.810755 GGCGTTTCCTTTCCTTTCGAT 59.189 47.619 0.00 0.00 0.00 3.59
114 115 1.232119 GGCGTTTCCTTTCCTTTCGA 58.768 50.000 0.00 0.00 0.00 3.71
115 116 0.240145 GGGCGTTTCCTTTCCTTTCG 59.760 55.000 0.00 0.00 34.39 3.46
116 117 0.601558 GGGGCGTTTCCTTTCCTTTC 59.398 55.000 0.00 0.00 34.39 2.62
117 118 0.105913 TGGGGCGTTTCCTTTCCTTT 60.106 50.000 0.00 0.00 34.39 3.11
118 119 0.826256 GTGGGGCGTTTCCTTTCCTT 60.826 55.000 0.00 0.00 34.39 3.36
119 120 1.228459 GTGGGGCGTTTCCTTTCCT 60.228 57.895 0.00 0.00 34.39 3.36
120 121 2.273179 GGTGGGGCGTTTCCTTTCC 61.273 63.158 0.00 0.00 34.39 3.13
121 122 2.622962 CGGTGGGGCGTTTCCTTTC 61.623 63.158 0.00 0.00 34.39 2.62
122 123 2.596338 CGGTGGGGCGTTTCCTTT 60.596 61.111 0.00 0.00 34.39 3.11
134 135 3.470888 CTAGGAGGGTGGCGGTGG 61.471 72.222 0.00 0.00 0.00 4.61
135 136 3.470888 CCTAGGAGGGTGGCGGTG 61.471 72.222 1.05 0.00 0.00 4.94
144 145 4.514577 CGTGCGTGCCCTAGGAGG 62.515 72.222 11.48 0.00 34.30 4.30
145 146 4.514577 CCGTGCGTGCCCTAGGAG 62.515 72.222 11.48 1.06 0.00 3.69
148 149 4.760047 AAGCCGTGCGTGCCCTAG 62.760 66.667 0.00 0.00 0.00 3.02
149 150 4.752879 GAAGCCGTGCGTGCCCTA 62.753 66.667 0.00 0.00 0.00 3.53
193 194 4.779733 TCCACCTCCTCCCTCGCC 62.780 72.222 0.00 0.00 0.00 5.54
194 195 2.683933 TTCCACCTCCTCCCTCGC 60.684 66.667 0.00 0.00 0.00 5.03
195 196 0.033405 TACTTCCACCTCCTCCCTCG 60.033 60.000 0.00 0.00 0.00 4.63
196 197 1.007359 ACTACTTCCACCTCCTCCCTC 59.993 57.143 0.00 0.00 0.00 4.30
197 198 1.007359 GACTACTTCCACCTCCTCCCT 59.993 57.143 0.00 0.00 0.00 4.20
198 199 1.487300 GACTACTTCCACCTCCTCCC 58.513 60.000 0.00 0.00 0.00 4.30
199 200 1.487300 GGACTACTTCCACCTCCTCC 58.513 60.000 0.00 0.00 45.10 4.30
208 209 2.493501 GTCGCCGGGACTACTTCC 59.506 66.667 2.18 0.00 45.00 3.46
209 210 2.101770 CGTCGCCGGGACTACTTC 59.898 66.667 17.48 0.00 43.79 3.01
210 211 4.125695 GCGTCGCCGGGACTACTT 62.126 66.667 17.48 0.00 43.79 2.24
222 223 2.433664 AAAACCCTAGCCGCGTCG 60.434 61.111 4.92 0.00 0.00 5.12
223 224 2.104859 GGAAAACCCTAGCCGCGTC 61.105 63.158 4.92 0.00 0.00 5.19
224 225 2.046604 GGAAAACCCTAGCCGCGT 60.047 61.111 4.92 0.00 0.00 6.01
225 226 2.822701 GGGAAAACCCTAGCCGCG 60.823 66.667 0.00 0.00 34.51 6.46
234 235 2.732016 GCAACACGGGGGAAAACC 59.268 61.111 0.00 0.00 39.11 3.27
235 236 2.082629 CTGGCAACACGGGGGAAAAC 62.083 60.000 0.00 0.00 46.17 2.43
236 237 1.830408 CTGGCAACACGGGGGAAAA 60.830 57.895 0.00 0.00 46.17 2.29
237 238 2.203422 CTGGCAACACGGGGGAAA 60.203 61.111 0.00 0.00 46.17 3.13
238 239 3.172106 TCTGGCAACACGGGGGAA 61.172 61.111 0.00 0.00 46.17 3.97
239 240 3.636231 CTCTGGCAACACGGGGGA 61.636 66.667 0.00 0.00 46.17 4.81
240 241 4.722700 CCTCTGGCAACACGGGGG 62.723 72.222 0.00 0.00 46.17 5.40
241 242 3.612247 CTCCTCTGGCAACACGGGG 62.612 68.421 0.00 0.00 46.17 5.73
242 243 2.046892 CTCCTCTGGCAACACGGG 60.047 66.667 0.00 0.00 46.17 5.28
243 244 2.046892 CCTCCTCTGGCAACACGG 60.047 66.667 0.00 0.00 46.17 4.94
244 245 2.046892 CCCTCCTCTGGCAACACG 60.047 66.667 0.00 0.00 46.17 4.49
251 252 3.335356 ATGCGTTGCCCTCCTCTGG 62.335 63.158 0.00 0.00 0.00 3.86
252 253 2.110967 CATGCGTTGCCCTCCTCTG 61.111 63.158 0.00 0.00 0.00 3.35
253 254 2.129555 AACATGCGTTGCCCTCCTCT 62.130 55.000 0.00 0.00 32.81 3.69
254 255 1.675641 AACATGCGTTGCCCTCCTC 60.676 57.895 0.00 0.00 32.81 3.71
255 256 1.973281 CAACATGCGTTGCCCTCCT 60.973 57.895 0.00 0.00 45.64 3.69
256 257 2.568090 CAACATGCGTTGCCCTCC 59.432 61.111 0.00 0.00 45.64 4.30
263 264 1.408969 AAAAGGGGACAACATGCGTT 58.591 45.000 0.00 0.00 35.01 4.84
264 265 2.279935 TAAAAGGGGACAACATGCGT 57.720 45.000 0.00 0.00 0.00 5.24
265 266 3.056891 ACATTAAAAGGGGACAACATGCG 60.057 43.478 0.00 0.00 0.00 4.73
266 267 4.244862 CACATTAAAAGGGGACAACATGC 58.755 43.478 0.00 0.00 0.00 4.06
267 268 4.526262 TCCACATTAAAAGGGGACAACATG 59.474 41.667 0.00 0.00 0.00 3.21
268 269 4.746466 TCCACATTAAAAGGGGACAACAT 58.254 39.130 0.00 0.00 0.00 2.71
269 270 4.186077 TCCACATTAAAAGGGGACAACA 57.814 40.909 0.00 0.00 0.00 3.33
270 271 4.526650 ACATCCACATTAAAAGGGGACAAC 59.473 41.667 4.54 0.00 0.00 3.32
271 272 4.746466 ACATCCACATTAAAAGGGGACAA 58.254 39.130 4.54 0.00 0.00 3.18
272 273 4.396357 ACATCCACATTAAAAGGGGACA 57.604 40.909 4.54 0.00 0.00 4.02
273 274 8.528044 TTATTACATCCACATTAAAAGGGGAC 57.472 34.615 4.54 0.00 0.00 4.46
274 275 8.561769 TCTTATTACATCCACATTAAAAGGGGA 58.438 33.333 4.89 4.89 0.00 4.81
275 276 8.760980 TCTTATTACATCCACATTAAAAGGGG 57.239 34.615 0.00 0.00 0.00 4.79
284 285 9.466497 AGTCAACATTTCTTATTACATCCACAT 57.534 29.630 0.00 0.00 0.00 3.21
285 286 8.862325 AGTCAACATTTCTTATTACATCCACA 57.138 30.769 0.00 0.00 0.00 4.17
296 297 9.409312 CAAATGCACAATAGTCAACATTTCTTA 57.591 29.630 0.00 0.00 33.74 2.10
297 298 7.927629 ACAAATGCACAATAGTCAACATTTCTT 59.072 29.630 0.00 0.00 33.74 2.52
298 299 7.436118 ACAAATGCACAATAGTCAACATTTCT 58.564 30.769 0.00 0.00 33.74 2.52
299 300 7.642071 ACAAATGCACAATAGTCAACATTTC 57.358 32.000 0.00 0.00 33.74 2.17
300 301 8.436046 AAACAAATGCACAATAGTCAACATTT 57.564 26.923 0.00 0.00 35.13 2.32
301 302 8.336806 CAAAACAAATGCACAATAGTCAACATT 58.663 29.630 0.00 0.00 0.00 2.71
302 303 7.041916 CCAAAACAAATGCACAATAGTCAACAT 60.042 33.333 0.00 0.00 0.00 2.71
303 304 6.257411 CCAAAACAAATGCACAATAGTCAACA 59.743 34.615 0.00 0.00 0.00 3.33
304 305 6.257630 ACCAAAACAAATGCACAATAGTCAAC 59.742 34.615 0.00 0.00 0.00 3.18
305 306 6.257411 CACCAAAACAAATGCACAATAGTCAA 59.743 34.615 0.00 0.00 0.00 3.18
306 307 5.752472 CACCAAAACAAATGCACAATAGTCA 59.248 36.000 0.00 0.00 0.00 3.41
307 308 5.177327 CCACCAAAACAAATGCACAATAGTC 59.823 40.000 0.00 0.00 0.00 2.59
308 309 5.055812 CCACCAAAACAAATGCACAATAGT 58.944 37.500 0.00 0.00 0.00 2.12
309 310 5.055812 ACCACCAAAACAAATGCACAATAG 58.944 37.500 0.00 0.00 0.00 1.73
310 311 5.028549 ACCACCAAAACAAATGCACAATA 57.971 34.783 0.00 0.00 0.00 1.90
311 312 3.883669 ACCACCAAAACAAATGCACAAT 58.116 36.364 0.00 0.00 0.00 2.71
312 313 3.340814 ACCACCAAAACAAATGCACAA 57.659 38.095 0.00 0.00 0.00 3.33
313 314 3.005554 CAACCACCAAAACAAATGCACA 58.994 40.909 0.00 0.00 0.00 4.57
314 315 2.223226 GCAACCACCAAAACAAATGCAC 60.223 45.455 0.00 0.00 33.00 4.57
315 316 2.012673 GCAACCACCAAAACAAATGCA 58.987 42.857 0.00 0.00 33.00 3.96
316 317 2.012673 TGCAACCACCAAAACAAATGC 58.987 42.857 0.00 0.00 0.00 3.56
317 318 4.897025 ATTGCAACCACCAAAACAAATG 57.103 36.364 0.00 0.00 0.00 2.32
318 319 4.946157 TGAATTGCAACCACCAAAACAAAT 59.054 33.333 0.00 0.00 0.00 2.32
319 320 4.154918 GTGAATTGCAACCACCAAAACAAA 59.845 37.500 18.14 0.00 0.00 2.83
320 321 3.686726 GTGAATTGCAACCACCAAAACAA 59.313 39.130 18.14 0.00 0.00 2.83
321 322 3.055530 AGTGAATTGCAACCACCAAAACA 60.056 39.130 22.68 4.08 0.00 2.83
322 323 3.530535 AGTGAATTGCAACCACCAAAAC 58.469 40.909 22.68 6.49 0.00 2.43
323 324 3.902881 AGTGAATTGCAACCACCAAAA 57.097 38.095 22.68 0.00 0.00 2.44
324 325 3.902881 AAGTGAATTGCAACCACCAAA 57.097 38.095 22.68 0.00 0.00 3.28
325 326 3.196469 TGAAAGTGAATTGCAACCACCAA 59.804 39.130 22.68 9.37 0.00 3.67
326 327 2.762887 TGAAAGTGAATTGCAACCACCA 59.237 40.909 22.68 14.60 0.00 4.17
327 328 3.451141 TGAAAGTGAATTGCAACCACC 57.549 42.857 22.68 12.81 0.00 4.61
328 329 3.184986 GCATGAAAGTGAATTGCAACCAC 59.815 43.478 20.21 20.21 33.58 4.16
329 330 3.391965 GCATGAAAGTGAATTGCAACCA 58.608 40.909 0.00 0.00 33.58 3.67
330 331 2.738314 GGCATGAAAGTGAATTGCAACC 59.262 45.455 0.00 0.00 35.04 3.77
331 332 3.391965 TGGCATGAAAGTGAATTGCAAC 58.608 40.909 0.00 0.00 35.04 4.17
332 333 3.747854 TGGCATGAAAGTGAATTGCAA 57.252 38.095 0.00 0.00 35.04 4.08
333 334 3.747854 TTGGCATGAAAGTGAATTGCA 57.252 38.095 0.00 0.00 35.04 4.08
334 335 5.387279 CAAATTGGCATGAAAGTGAATTGC 58.613 37.500 0.00 0.00 0.00 3.56
335 336 5.933790 CCAAATTGGCATGAAAGTGAATTG 58.066 37.500 0.00 0.00 0.00 2.32
359 360 0.248458 AACGTTTTGGCTGCTTGTCG 60.248 50.000 0.00 1.76 0.00 4.35
414 415 1.502690 TTTAGATTCGGCCCCTGCTA 58.497 50.000 0.00 0.00 37.74 3.49
424 425 7.707035 GGGTATGTATGGAGCTATTTAGATTCG 59.293 40.741 0.00 0.00 0.00 3.34
430 431 6.557253 ACTGTGGGTATGTATGGAGCTATTTA 59.443 38.462 0.00 0.00 0.00 1.40
434 435 3.895656 GACTGTGGGTATGTATGGAGCTA 59.104 47.826 0.00 0.00 0.00 3.32
440 441 3.069586 ACGGATGACTGTGGGTATGTATG 59.930 47.826 0.00 0.00 33.97 2.39
446 447 1.274167 GACAACGGATGACTGTGGGTA 59.726 52.381 0.00 0.00 35.61 3.69
458 459 1.890489 TCTGAAGGAATCGACAACGGA 59.110 47.619 0.00 0.00 40.21 4.69
465 466 5.118990 GGATCATTTGTCTGAAGGAATCGA 58.881 41.667 0.00 0.00 0.00 3.59
467 468 4.878397 ACGGATCATTTGTCTGAAGGAATC 59.122 41.667 0.00 0.00 0.00 2.52
468 469 4.637534 CACGGATCATTTGTCTGAAGGAAT 59.362 41.667 0.00 0.00 0.00 3.01
472 473 3.338249 ACCACGGATCATTTGTCTGAAG 58.662 45.455 0.00 0.00 0.00 3.02
474 475 3.417069 AACCACGGATCATTTGTCTGA 57.583 42.857 0.00 0.00 0.00 3.27
477 479 7.486870 GGTAAATTTAACCACGGATCATTTGTC 59.513 37.037 1.48 0.00 36.96 3.18
482 484 5.511363 TGGGTAAATTTAACCACGGATCAT 58.489 37.500 27.68 0.00 45.25 2.45
494 496 3.682155 CGTGGGGACGATGGGTAAATTTA 60.682 47.826 0.00 0.00 34.64 1.40
508 1662 1.963172 ACAAAGAGTTTCGTGGGGAC 58.037 50.000 0.00 0.00 0.00 4.46
509 1663 2.721425 AACAAAGAGTTTCGTGGGGA 57.279 45.000 0.00 0.00 37.03 4.81
511 1665 7.200455 AGAAAATTAACAAAGAGTTTCGTGGG 58.800 34.615 0.00 0.00 41.64 4.61
512 1666 9.724839 TTAGAAAATTAACAAAGAGTTTCGTGG 57.275 29.630 0.00 0.00 41.64 4.94
653 1809 0.901114 ATGTGCCCATCAAGCTTGCA 60.901 50.000 21.99 12.87 0.00 4.08
657 1813 1.745087 CGTTTATGTGCCCATCAAGCT 59.255 47.619 0.00 0.00 32.29 3.74
678 1834 1.305201 GTTGTGTCCGTGTCCATGTT 58.695 50.000 0.00 0.00 0.00 2.71
682 1838 1.153329 GTGGTTGTGTCCGTGTCCA 60.153 57.895 0.00 0.00 0.00 4.02
696 1858 0.984230 AGTGATGATTGGGACGTGGT 59.016 50.000 0.00 0.00 0.00 4.16
717 1879 1.028868 GTCAATGGTGGAGAGGCTGC 61.029 60.000 0.00 0.00 0.00 5.25
776 1938 4.279420 GGGATTGATGGGAATTAGAACAGC 59.721 45.833 0.00 0.00 0.00 4.40
783 1945 4.511786 TCAACGGGATTGATGGGAATTA 57.488 40.909 0.00 0.00 42.62 1.40
793 1955 7.938563 TTTAGAACAAAAATCAACGGGATTG 57.061 32.000 5.49 0.00 45.46 2.67
796 1958 7.336161 TCTTTTAGAACAAAAATCAACGGGA 57.664 32.000 0.00 0.00 0.00 5.14
859 2039 2.355444 GTCGGGTTTCGGAAGTTTGAAA 59.645 45.455 1.38 1.38 39.77 2.69
886 2066 1.262417 TGGTTGCCACGTGATAGAGA 58.738 50.000 19.30 0.00 0.00 3.10
887 2067 1.935873 CATGGTTGCCACGTGATAGAG 59.064 52.381 19.30 0.00 35.80 2.43
944 2125 5.593095 AGGCGGAAAGAAGGGATTTTTATAC 59.407 40.000 0.00 0.00 0.00 1.47
1089 2270 2.038975 AGGGCGAGGTAGCAGGAA 59.961 61.111 0.00 0.00 39.27 3.36
1245 2426 2.711922 CCCGAACTCCTCCACCGAG 61.712 68.421 0.00 0.00 35.72 4.63
1275 2456 2.506962 GTGTTGGACGTGACCCCA 59.493 61.111 0.00 0.00 0.00 4.96
1479 2660 0.747852 GAGGAAGAGGAACTAGCGGG 59.252 60.000 0.00 0.00 41.55 6.13
1530 2711 7.919621 GCAAGATTTGAGAGGAGAAATAAATGG 59.080 37.037 0.00 0.00 0.00 3.16
1557 2738 3.476295 AGCGTGCACTATTGATTTGTG 57.524 42.857 16.19 0.00 35.08 3.33
1619 2803 6.193514 TGCATTTTGTAGATGTGTGTATGG 57.806 37.500 0.00 0.00 0.00 2.74
1635 2819 8.168790 ACCAGCAGAAAATAAATTTGCATTTT 57.831 26.923 10.17 10.17 37.12 1.82
1705 2891 3.941483 GGAAGCTTAGCTATGTGCAGAAA 59.059 43.478 7.32 0.00 45.94 2.52
1743 2929 6.939132 ACATGAACATGGATTGAGATTCTC 57.061 37.500 17.25 6.73 42.91 2.87
2013 3209 4.296690 AGACGACACTACAAGCAAAGTAC 58.703 43.478 0.00 0.00 0.00 2.73
2014 3210 4.037089 TGAGACGACACTACAAGCAAAGTA 59.963 41.667 0.00 0.00 0.00 2.24
2015 3211 3.181479 TGAGACGACACTACAAGCAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
2016 3212 3.381045 TGAGACGACACTACAAGCAAAG 58.619 45.455 0.00 0.00 0.00 2.77
2017 3213 3.446310 TGAGACGACACTACAAGCAAA 57.554 42.857 0.00 0.00 0.00 3.68
2030 3226 4.625028 CAAATATGGAGCAGATGAGACGA 58.375 43.478 0.00 0.00 0.00 4.20
2104 3300 8.663209 TGTACCAAAAATGGGTAGTACTACTA 57.337 34.615 27.71 19.04 41.37 1.82
2105 3301 7.557875 TGTACCAAAAATGGGTAGTACTACT 57.442 36.000 27.71 9.82 41.37 2.57
2106 3302 7.201670 GCATGTACCAAAAATGGGTAGTACTAC 60.202 40.741 22.53 22.53 41.37 2.73
2175 3371 7.952671 TCTCACATAAACTCTCCATACATACC 58.047 38.462 0.00 0.00 0.00 2.73
2223 3419 7.148154 GCACTAGTAGACAGTATCCTGATATGG 60.148 44.444 3.59 0.00 41.50 2.74
2270 3466 3.006112 TCCCAACAACTTTGCACTACA 57.994 42.857 0.00 0.00 0.00 2.74
2381 3585 0.037046 GCCTTGAAAACCAGGCCATG 60.037 55.000 5.01 0.00 41.28 3.66
2461 3668 9.950496 CTACTTAAATAGGAAGTGGCATGATAT 57.050 33.333 0.00 0.00 37.68 1.63
2462 3669 8.934697 ACTACTTAAATAGGAAGTGGCATGATA 58.065 33.333 0.00 0.00 38.56 2.15
2544 3751 2.033747 CCGCTACAATCAACACTATGCG 60.034 50.000 0.00 0.00 40.44 4.73
2565 3772 1.882912 TCCTGCACATCACAGTTCAC 58.117 50.000 0.00 0.00 33.09 3.18
2755 3962 5.125100 TCTCTGGTTTGCATGAACAATTC 57.875 39.130 0.00 0.00 0.00 2.17
2790 3997 2.354821 GCTTAAATCGGCTGTTACAGGG 59.645 50.000 14.63 0.00 31.21 4.45
2857 4064 8.217131 ACAAATTATTTCCCGACAAGTATACC 57.783 34.615 0.00 0.00 0.00 2.73
2907 4115 7.275341 CAGAACAATTTGCAAGTACAGTCAAAA 59.725 33.333 0.00 0.00 32.97 2.44
2964 4172 3.419580 ATCCGGCCTTGGCCATCA 61.420 61.111 27.80 12.68 0.00 3.07
2977 4185 0.250038 CATAGCTCCCACCACATCCG 60.250 60.000 0.00 0.00 0.00 4.18
3117 4325 3.441222 CAGCATGATGAACTAACCTGCAA 59.559 43.478 4.56 0.00 39.69 4.08
3216 4424 6.635239 CACGTTTCTGAACATTAAATTTCCGT 59.365 34.615 0.00 0.00 35.44 4.69
3219 4427 7.646130 TCACCACGTTTCTGAACATTAAATTTC 59.354 33.333 0.00 0.00 35.44 2.17
3221 4429 7.033530 TCACCACGTTTCTGAACATTAAATT 57.966 32.000 0.00 0.00 35.44 1.82
3247 4455 6.043358 GGGGAGCTAGTATAGTCAAATCCTTT 59.957 42.308 0.00 0.00 41.93 3.11
3254 4462 4.808767 TCAGGGGAGCTAGTATAGTCAA 57.191 45.455 0.00 0.00 41.93 3.18
3314 4522 7.461749 AGGGAGAACAATCTGTCAATTTAAGA 58.538 34.615 0.00 0.00 35.54 2.10
3329 4669 3.011566 TGCAGTTTTGAGGGAGAACAA 57.988 42.857 0.00 0.00 0.00 2.83
3348 4688 4.427312 GGAATTAGCATTGGCAAGAGTTG 58.573 43.478 5.96 0.00 44.61 3.16
3349 4689 3.129287 CGGAATTAGCATTGGCAAGAGTT 59.871 43.478 5.96 1.52 44.61 3.01
3350 4690 2.684881 CGGAATTAGCATTGGCAAGAGT 59.315 45.455 5.96 0.00 44.61 3.24
3351 4691 2.945008 TCGGAATTAGCATTGGCAAGAG 59.055 45.455 5.96 1.82 44.61 2.85
3352 4692 2.997980 TCGGAATTAGCATTGGCAAGA 58.002 42.857 5.96 0.00 44.61 3.02
3353 4693 3.119531 TGTTCGGAATTAGCATTGGCAAG 60.120 43.478 5.96 0.00 44.61 4.01
3354 4694 2.822561 TGTTCGGAATTAGCATTGGCAA 59.177 40.909 0.68 0.68 44.61 4.52
3355 4695 2.441410 TGTTCGGAATTAGCATTGGCA 58.559 42.857 0.00 0.00 44.61 4.92
3356 4696 3.374745 CATGTTCGGAATTAGCATTGGC 58.625 45.455 0.00 0.00 41.61 4.52
3357 4697 3.796504 GCCATGTTCGGAATTAGCATTGG 60.797 47.826 0.00 0.00 0.00 3.16
3358 4698 3.374745 GCCATGTTCGGAATTAGCATTG 58.625 45.455 0.00 0.00 0.00 2.82
3359 4699 2.362077 GGCCATGTTCGGAATTAGCATT 59.638 45.455 0.00 0.00 0.00 3.56
3360 4700 1.956477 GGCCATGTTCGGAATTAGCAT 59.044 47.619 0.00 0.00 0.00 3.79
3361 4701 1.388547 GGCCATGTTCGGAATTAGCA 58.611 50.000 0.00 0.00 0.00 3.49
3362 4702 0.668535 GGGCCATGTTCGGAATTAGC 59.331 55.000 4.39 0.00 0.00 3.09
3363 4703 0.944386 CGGGCCATGTTCGGAATTAG 59.056 55.000 4.39 0.00 0.00 1.73
3364 4704 0.253610 ACGGGCCATGTTCGGAATTA 59.746 50.000 4.39 0.00 0.00 1.40
3365 4705 1.001393 ACGGGCCATGTTCGGAATT 60.001 52.632 4.39 0.00 0.00 2.17
3366 4706 1.451387 GACGGGCCATGTTCGGAAT 60.451 57.895 4.39 0.00 0.00 3.01
3367 4707 2.046700 GACGGGCCATGTTCGGAA 60.047 61.111 4.39 0.00 0.00 4.30
3368 4708 3.315140 TGACGGGCCATGTTCGGA 61.315 61.111 4.39 0.00 0.00 4.55
3369 4709 3.124921 GTGACGGGCCATGTTCGG 61.125 66.667 4.39 0.00 0.00 4.30
3370 4710 2.047274 AGTGACGGGCCATGTTCG 60.047 61.111 4.39 0.00 0.00 3.95
3371 4711 0.392998 ATCAGTGACGGGCCATGTTC 60.393 55.000 4.39 0.39 0.00 3.18
3372 4712 0.038166 AATCAGTGACGGGCCATGTT 59.962 50.000 4.39 0.00 0.00 2.71
3373 4713 0.038166 AAATCAGTGACGGGCCATGT 59.962 50.000 4.39 1.11 0.00 3.21
3374 4714 0.452987 CAAATCAGTGACGGGCCATG 59.547 55.000 4.39 0.00 0.00 3.66
3375 4715 0.680921 CCAAATCAGTGACGGGCCAT 60.681 55.000 4.39 0.00 0.00 4.40
3376 4716 1.303236 CCAAATCAGTGACGGGCCA 60.303 57.895 4.39 0.00 0.00 5.36
3377 4717 2.046285 CCCAAATCAGTGACGGGCC 61.046 63.158 10.40 0.00 0.00 5.80
3378 4718 0.035820 TACCCAAATCAGTGACGGGC 60.036 55.000 19.51 0.00 40.87 6.13
3379 4719 2.093181 TCATACCCAAATCAGTGACGGG 60.093 50.000 18.44 18.44 43.02 5.28
3380 4720 3.260475 TCATACCCAAATCAGTGACGG 57.740 47.619 0.00 0.00 0.00 4.79
3381 4721 5.050091 GCTATTCATACCCAAATCAGTGACG 60.050 44.000 0.00 0.00 0.00 4.35
3382 4722 5.822519 TGCTATTCATACCCAAATCAGTGAC 59.177 40.000 0.00 0.00 0.00 3.67
3383 4723 6.000246 TGCTATTCATACCCAAATCAGTGA 58.000 37.500 0.00 0.00 0.00 3.41
3384 4724 5.240183 CCTGCTATTCATACCCAAATCAGTG 59.760 44.000 0.00 0.00 0.00 3.66
3385 4725 5.380043 CCTGCTATTCATACCCAAATCAGT 58.620 41.667 0.00 0.00 0.00 3.41
3386 4726 4.217118 GCCTGCTATTCATACCCAAATCAG 59.783 45.833 0.00 0.00 0.00 2.90
3387 4727 4.144297 GCCTGCTATTCATACCCAAATCA 58.856 43.478 0.00 0.00 0.00 2.57
3388 4728 3.507622 GGCCTGCTATTCATACCCAAATC 59.492 47.826 0.00 0.00 0.00 2.17
3389 4729 3.140895 AGGCCTGCTATTCATACCCAAAT 59.859 43.478 3.11 0.00 0.00 2.32
3390 4730 2.513738 AGGCCTGCTATTCATACCCAAA 59.486 45.455 3.11 0.00 0.00 3.28
3391 4731 2.135189 AGGCCTGCTATTCATACCCAA 58.865 47.619 3.11 0.00 0.00 4.12
3392 4732 1.819753 AGGCCTGCTATTCATACCCA 58.180 50.000 3.11 0.00 0.00 4.51
3393 4733 5.509840 CGATATAGGCCTGCTATTCATACCC 60.510 48.000 17.99 0.00 0.00 3.69
3394 4734 5.069251 ACGATATAGGCCTGCTATTCATACC 59.931 44.000 17.99 0.00 0.00 2.73
3395 4735 6.150396 ACGATATAGGCCTGCTATTCATAC 57.850 41.667 17.99 0.00 0.00 2.39
3396 4736 6.791867 AACGATATAGGCCTGCTATTCATA 57.208 37.500 17.99 3.19 0.00 2.15
3397 4737 5.683876 AACGATATAGGCCTGCTATTCAT 57.316 39.130 17.99 0.43 0.00 2.57
3398 4738 5.483685 AAACGATATAGGCCTGCTATTCA 57.516 39.130 17.99 0.00 0.00 2.57
3399 4739 6.166982 AGAAAACGATATAGGCCTGCTATTC 58.833 40.000 17.99 8.91 0.00 1.75
3400 4740 6.115448 AGAAAACGATATAGGCCTGCTATT 57.885 37.500 17.99 0.00 0.00 1.73
3401 4741 5.746990 AGAAAACGATATAGGCCTGCTAT 57.253 39.130 17.99 12.49 0.00 2.97
3402 4742 5.546621 AAGAAAACGATATAGGCCTGCTA 57.453 39.130 17.99 7.49 0.00 3.49
3403 4743 4.423625 AAGAAAACGATATAGGCCTGCT 57.576 40.909 17.99 5.03 0.00 4.24
3404 4744 4.574828 TGAAAGAAAACGATATAGGCCTGC 59.425 41.667 17.99 0.64 0.00 4.85
3405 4745 6.316390 ACTTGAAAGAAAACGATATAGGCCTG 59.684 38.462 17.99 0.00 0.00 4.85
3406 4746 6.415573 ACTTGAAAGAAAACGATATAGGCCT 58.584 36.000 11.78 11.78 0.00 5.19
3407 4747 6.679327 ACTTGAAAGAAAACGATATAGGCC 57.321 37.500 0.00 0.00 0.00 5.19
3456 4797 8.302965 AGTACAAACGAAACTACCTGTAATTC 57.697 34.615 0.00 0.00 0.00 2.17
3458 4799 7.927629 TGAAGTACAAACGAAACTACCTGTAAT 59.072 33.333 0.00 0.00 0.00 1.89
3462 4803 6.780706 ATGAAGTACAAACGAAACTACCTG 57.219 37.500 0.00 0.00 0.00 4.00
3471 4812 6.071560 AGGAGTCACATATGAAGTACAAACGA 60.072 38.462 10.38 0.00 36.31 3.85
3514 4863 8.026607 GCAAAGCCATTTTGTATTTAGTACAGA 58.973 33.333 0.00 0.00 46.35 3.41
3553 4902 6.537355 TCAGAAAGAGAAACTGTCATGGATT 58.463 36.000 0.00 0.00 35.41 3.01
3763 5112 2.248248 GATATCCCACCCGACATCTCA 58.752 52.381 0.00 0.00 0.00 3.27
3805 5154 2.615912 GGAAGCAGAGTTCCATATGTGC 59.384 50.000 1.24 3.86 44.89 4.57
3829 5178 1.207329 ACATCGGTCTTTAGCCTCACC 59.793 52.381 0.00 0.00 0.00 4.02
4003 5352 2.622470 CACATCCACACCAACAATGTCA 59.378 45.455 0.00 0.00 0.00 3.58
4132 5481 2.005960 GCGCCTCTCCGTACACAGAT 62.006 60.000 0.00 0.00 0.00 2.90
4141 5490 1.021390 AAACTTCATGCGCCTCTCCG 61.021 55.000 4.18 0.00 0.00 4.63
4180 5529 9.571816 GAAGAAGAAGATCCATTATTCCTCAAT 57.428 33.333 0.00 0.00 32.12 2.57
4253 5602 2.283834 AGACACCCCATTTCACCCATA 58.716 47.619 0.00 0.00 0.00 2.74
4416 5765 8.631480 TTGCCTTCTAGTATATTCGATCAGTA 57.369 34.615 0.00 0.00 0.00 2.74
4429 5778 7.202102 GGGAGAAAGGATAATTGCCTTCTAGTA 60.202 40.741 12.99 0.00 44.72 1.82
4430 5779 6.409810 GGGAGAAAGGATAATTGCCTTCTAGT 60.410 42.308 12.99 0.75 44.72 2.57
4431 5780 6.000840 GGGAGAAAGGATAATTGCCTTCTAG 58.999 44.000 12.99 0.00 44.72 2.43
4456 5805 2.736995 ACGTCGGGCGACACATTG 60.737 61.111 9.82 0.00 44.77 2.82
4831 6195 2.932614 CAACCGAGAGCTCCAAATAGTG 59.067 50.000 10.93 0.00 0.00 2.74
4832 6196 2.678190 GCAACCGAGAGCTCCAAATAGT 60.678 50.000 10.93 0.00 0.00 2.12
4833 6197 1.936547 GCAACCGAGAGCTCCAAATAG 59.063 52.381 10.93 0.00 0.00 1.73
4834 6198 1.555075 AGCAACCGAGAGCTCCAAATA 59.445 47.619 10.93 0.00 36.00 1.40
4835 6199 0.326264 AGCAACCGAGAGCTCCAAAT 59.674 50.000 10.93 0.00 36.00 2.32
4836 6200 1.754745 AGCAACCGAGAGCTCCAAA 59.245 52.632 10.93 0.00 36.00 3.28
4837 6201 3.471620 AGCAACCGAGAGCTCCAA 58.528 55.556 10.93 0.00 36.00 3.53
4841 6205 1.967319 TTTTTGAGCAACCGAGAGCT 58.033 45.000 0.00 0.00 45.25 4.09
4860 6224 3.564225 ACGTCGAGAGCTCCAAAATTTTT 59.436 39.130 10.93 0.00 0.00 1.94
4861 6225 3.139077 ACGTCGAGAGCTCCAAAATTTT 58.861 40.909 10.93 0.00 0.00 1.82
4862 6226 2.737252 GACGTCGAGAGCTCCAAAATTT 59.263 45.455 10.93 0.00 0.00 1.82
4863 6227 2.338500 GACGTCGAGAGCTCCAAAATT 58.662 47.619 10.93 0.00 0.00 1.82
4864 6228 1.404315 GGACGTCGAGAGCTCCAAAAT 60.404 52.381 10.93 0.00 0.00 1.82
4865 6229 0.038526 GGACGTCGAGAGCTCCAAAA 60.039 55.000 10.93 0.00 0.00 2.44
4866 6230 1.176619 TGGACGTCGAGAGCTCCAAA 61.177 55.000 10.93 0.00 29.50 3.28
4867 6231 1.587043 CTGGACGTCGAGAGCTCCAA 61.587 60.000 21.65 0.00 32.30 3.53
4868 6232 2.033602 TGGACGTCGAGAGCTCCA 59.966 61.111 10.93 0.00 0.00 3.86
4869 6233 1.098712 ATCTGGACGTCGAGAGCTCC 61.099 60.000 29.84 7.51 34.26 4.70
4870 6234 1.584175 TATCTGGACGTCGAGAGCTC 58.416 55.000 29.84 5.27 34.26 4.09
4871 6235 2.039818 TTATCTGGACGTCGAGAGCT 57.960 50.000 29.84 19.31 34.26 4.09
4872 6236 2.541999 CCTTTATCTGGACGTCGAGAGC 60.542 54.545 29.84 8.91 34.26 4.09
4879 6243 2.544844 TCCTCCCTTTATCTGGACGT 57.455 50.000 0.00 0.00 0.00 4.34
4889 6253 0.921256 CTCCACCCCATCCTCCCTTT 60.921 60.000 0.00 0.00 0.00 3.11
4892 6256 2.774351 CCTCCACCCCATCCTCCC 60.774 72.222 0.00 0.00 0.00 4.30
4895 6259 4.455137 CCCCCTCCACCCCATCCT 62.455 72.222 0.00 0.00 0.00 3.24
4909 6273 1.059006 ATGGAGAGATGCCAGTCCCC 61.059 60.000 0.00 0.00 39.11 4.81
4911 6275 5.669477 GATATAATGGAGAGATGCCAGTCC 58.331 45.833 0.00 0.00 39.11 3.85
4913 6277 4.161189 CCGATATAATGGAGAGATGCCAGT 59.839 45.833 0.00 0.00 39.11 4.00
4914 6278 4.442612 CCCGATATAATGGAGAGATGCCAG 60.443 50.000 0.00 0.00 39.11 4.85
4915 6279 3.452264 CCCGATATAATGGAGAGATGCCA 59.548 47.826 0.00 0.00 40.24 4.92
4917 6281 3.742640 GCCCCGATATAATGGAGAGATGC 60.743 52.174 0.00 0.00 0.00 3.91
4918 6282 3.491619 CGCCCCGATATAATGGAGAGATG 60.492 52.174 0.00 0.00 0.00 2.90
4919 6283 2.695666 CGCCCCGATATAATGGAGAGAT 59.304 50.000 0.00 0.00 0.00 2.75
4920 6284 2.100197 CGCCCCGATATAATGGAGAGA 58.900 52.381 0.00 0.00 0.00 3.10
4921 6285 1.137086 CCGCCCCGATATAATGGAGAG 59.863 57.143 0.00 0.00 0.00 3.20
4922 6286 1.191535 CCGCCCCGATATAATGGAGA 58.808 55.000 0.00 0.00 0.00 3.71
4923 6287 0.178068 CCCGCCCCGATATAATGGAG 59.822 60.000 0.00 0.00 0.00 3.86
4924 6288 1.268992 CCCCGCCCCGATATAATGGA 61.269 60.000 0.00 0.00 0.00 3.41
4925 6289 1.223487 CCCCGCCCCGATATAATGG 59.777 63.158 0.00 0.00 0.00 3.16
4926 6290 1.223487 CCCCCGCCCCGATATAATG 59.777 63.158 0.00 0.00 0.00 1.90
4927 6291 0.981277 CTCCCCCGCCCCGATATAAT 60.981 60.000 0.00 0.00 0.00 1.28
4928 6292 1.611261 CTCCCCCGCCCCGATATAA 60.611 63.158 0.00 0.00 0.00 0.98
4929 6293 2.038329 CTCCCCCGCCCCGATATA 59.962 66.667 0.00 0.00 0.00 0.86
4939 6303 2.657237 GATATGCGACCTCCCCCG 59.343 66.667 0.00 0.00 0.00 5.73
4940 6304 1.906824 TCGATATGCGACCTCCCCC 60.907 63.158 0.00 0.00 45.59 5.40
4941 6305 3.773370 TCGATATGCGACCTCCCC 58.227 61.111 0.00 0.00 45.59 4.81
4949 6313 1.066929 TCCATCCCACATCGATATGCG 60.067 52.381 0.00 0.00 42.69 4.73
4950 6314 2.350522 GTCCATCCCACATCGATATGC 58.649 52.381 0.00 0.00 36.50 3.14
4951 6315 2.568956 AGGTCCATCCCACATCGATATG 59.431 50.000 0.00 0.00 36.63 1.78
4952 6316 2.568956 CAGGTCCATCCCACATCGATAT 59.431 50.000 0.00 0.00 36.75 1.63
4953 6317 1.970640 CAGGTCCATCCCACATCGATA 59.029 52.381 0.00 0.00 36.75 2.92
4954 6318 0.761187 CAGGTCCATCCCACATCGAT 59.239 55.000 0.00 0.00 36.75 3.59
4955 6319 0.617535 ACAGGTCCATCCCACATCGA 60.618 55.000 0.00 0.00 36.75 3.59
4956 6320 0.253044 AACAGGTCCATCCCACATCG 59.747 55.000 0.00 0.00 36.75 3.84
4957 6321 1.755179 CAACAGGTCCATCCCACATC 58.245 55.000 0.00 0.00 36.75 3.06
4958 6322 0.323725 GCAACAGGTCCATCCCACAT 60.324 55.000 0.00 0.00 36.75 3.21
4959 6323 1.074775 GCAACAGGTCCATCCCACA 59.925 57.895 0.00 0.00 36.75 4.17
4960 6324 1.678970 GGCAACAGGTCCATCCCAC 60.679 63.158 0.00 0.00 36.75 4.61
4961 6325 1.852157 AGGCAACAGGTCCATCCCA 60.852 57.895 0.00 0.00 41.41 4.37
4962 6326 1.379044 CAGGCAACAGGTCCATCCC 60.379 63.158 0.00 0.00 41.41 3.85
4963 6327 0.257039 ATCAGGCAACAGGTCCATCC 59.743 55.000 0.00 0.00 41.41 3.51
4964 6328 1.211457 AGATCAGGCAACAGGTCCATC 59.789 52.381 0.00 0.00 41.41 3.51
4965 6329 1.064906 CAGATCAGGCAACAGGTCCAT 60.065 52.381 0.00 0.00 41.41 3.41
4966 6330 0.325933 CAGATCAGGCAACAGGTCCA 59.674 55.000 0.00 0.00 41.41 4.02
4967 6331 0.393537 CCAGATCAGGCAACAGGTCC 60.394 60.000 0.00 0.00 41.41 4.46
4968 6332 3.165606 CCAGATCAGGCAACAGGTC 57.834 57.895 0.00 0.00 41.41 3.85
5002 6858 1.518133 CTCTTCCTTGAGCTCGCCG 60.518 63.158 9.64 0.00 0.00 6.46
5003 6859 0.463620 ATCTCTTCCTTGAGCTCGCC 59.536 55.000 9.64 0.00 34.29 5.54
5004 6860 1.134848 ACATCTCTTCCTTGAGCTCGC 60.135 52.381 9.64 0.00 34.29 5.03
5059 7011 6.035843 CAGCATTTCATACATAAACCACCAC 58.964 40.000 0.00 0.00 0.00 4.16
5081 7033 6.183360 ACCAGTATCAGTTCTAGAATGCTCAG 60.183 42.308 8.75 0.00 0.00 3.35
5108 7060 3.712020 CGCAAGTCAGACTCCTCTC 57.288 57.895 2.72 0.00 0.00 3.20
5125 7077 5.332355 GCAAAAGGAAGTATCAGCGTATACG 60.332 44.000 20.87 20.87 37.41 3.06
5127 7079 4.743151 CGCAAAAGGAAGTATCAGCGTATA 59.257 41.667 0.00 0.00 39.18 1.47
5131 7083 1.999735 TCGCAAAAGGAAGTATCAGCG 59.000 47.619 0.00 0.00 44.66 5.18
5149 7101 9.088512 AGCATGACTAAGTTTTAACTAGAATCG 57.911 33.333 0.00 0.00 38.57 3.34
5193 7145 9.831737 GAAGCATCAACATATATACATCAAACC 57.168 33.333 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.