Multiple sequence alignment - TraesCS7A01G322100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G322100 chr7A 100.000 6171 0 0 1 6171 466241426 466247596 0.000000e+00 11396.0
1 TraesCS7A01G322100 chr7A 85.130 269 32 6 1431 1697 263715957 263716219 1.020000e-67 268.0
2 TraesCS7A01G322100 chr7A 88.034 117 11 3 1596 1711 8342340 8342226 1.080000e-27 135.0
3 TraesCS7A01G322100 chr7B 95.784 3653 117 16 2543 6171 419032264 419035903 0.000000e+00 5858.0
4 TraesCS7A01G322100 chr7B 92.714 1592 83 8 866 2429 419030525 419032111 0.000000e+00 2266.0
5 TraesCS7A01G322100 chr7B 89.506 162 14 3 1431 1592 223173074 223173232 1.050000e-47 202.0
6 TraesCS7A01G322100 chr7B 96.040 101 4 0 2445 2545 419032095 419032195 1.380000e-36 165.0
7 TraesCS7A01G322100 chr7D 95.411 3683 115 26 2445 6102 407846375 407850028 0.000000e+00 5816.0
8 TraesCS7A01G322100 chr7D 93.394 1983 79 13 493 2429 407844415 407846391 0.000000e+00 2889.0
9 TraesCS7A01G322100 chr7D 83.410 434 55 11 81 501 407794269 407794698 2.700000e-103 387.0
10 TraesCS7A01G322100 chr7D 85.385 260 34 4 1439 1697 246807506 246807762 3.670000e-67 267.0
11 TraesCS7A01G322100 chr6A 93.224 428 24 5 4968 5393 265993685 265993261 5.250000e-175 625.0
12 TraesCS7A01G322100 chr6A 88.146 329 33 2 2597 2921 265994442 265994116 2.700000e-103 387.0
13 TraesCS7A01G322100 chr6A 90.179 224 17 2 4528 4746 265994119 265993896 2.810000e-73 287.0
14 TraesCS7A01G322100 chr2B 76.000 525 87 21 85 601 375125394 375125887 1.030000e-57 235.0
15 TraesCS7A01G322100 chr2A 81.625 283 46 5 1430 1711 669882525 669882802 4.810000e-56 230.0
16 TraesCS7A01G322100 chr2A 75.340 515 86 21 81 586 218093105 218093587 6.270000e-50 209.0
17 TraesCS7A01G322100 chr6B 78.711 357 50 12 1430 1768 487124387 487124735 1.350000e-51 215.0
18 TraesCS7A01G322100 chr1D 80.000 290 42 10 1428 1711 12017184 12017463 3.770000e-47 200.0
19 TraesCS7A01G322100 chr1D 83.258 221 33 4 402 619 47919234 47919015 3.770000e-47 200.0
20 TraesCS7A01G322100 chr3B 80.738 244 36 6 291 523 445640128 445639885 4.910000e-41 180.0
21 TraesCS7A01G322100 chr3B 82.927 164 27 1 360 523 445649268 445649106 4.980000e-31 147.0
22 TraesCS7A01G322100 chr2D 76.923 221 42 5 1480 1698 38064706 38064493 3.910000e-22 117.0
23 TraesCS7A01G322100 chr4A 91.176 68 3 2 4179 4243 550497903 550497836 8.520000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G322100 chr7A 466241426 466247596 6170 False 11396.0 11396 100.000000 1 6171 1 chr7A.!!$F2 6170
1 TraesCS7A01G322100 chr7B 419030525 419035903 5378 False 2763.0 5858 94.846000 866 6171 3 chr7B.!!$F2 5305
2 TraesCS7A01G322100 chr7D 407844415 407850028 5613 False 4352.5 5816 94.402500 493 6102 2 chr7D.!!$F3 5609
3 TraesCS7A01G322100 chr6A 265993261 265994442 1181 True 433.0 625 90.516333 2597 5393 3 chr6A.!!$R1 2796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 388 0.032130 TCTCTCACACTGGCGACAAC 59.968 55.000 0.00 0.0 42.06 3.32 F
463 464 0.107831 AGCGCACCAACAGGACTTTA 59.892 50.000 11.47 0.0 0.00 1.85 F
611 613 0.172578 CCACTCGATTCGGCACAGTA 59.827 55.000 6.18 0.0 0.00 2.74 F
1240 1264 0.541063 TACGGCCTTCTCACTGGTCA 60.541 55.000 0.00 0.0 0.00 4.02 F
1455 1480 1.453015 GATACCCCACGCATTGCCA 60.453 57.895 2.41 0.0 0.00 4.92 F
2012 2063 1.994463 GGGACAGCTGGTTCCTGAT 59.006 57.895 19.93 0.0 42.55 2.90 F
3210 3348 0.032952 GCCTGGTCTAACGTGTGTCA 59.967 55.000 0.00 0.0 0.00 3.58 F
3851 3996 1.376295 GCCCAAATGCTTTGCCTGG 60.376 57.895 0.00 0.0 39.31 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 1470 1.212490 CAATTCCGTGGCAATGCGT 59.788 52.632 0.00 0.0 0.00 5.24 R
1660 1689 1.332195 TCCACTAGCATCCATCCGAG 58.668 55.000 0.00 0.0 0.00 4.63 R
1662 1691 1.620323 TGATCCACTAGCATCCATCCG 59.380 52.381 0.00 0.0 0.00 4.18 R
2448 2501 1.686052 TCACAATGGAAGTGTTTGCCC 59.314 47.619 0.00 0.0 46.63 5.36 R
3210 3348 1.788229 CCCCACTTTGTTCTTTGGGT 58.212 50.000 4.83 0.0 46.57 4.51 R
3893 4039 1.425066 AGGAGGCTGAAATTGGTGACA 59.575 47.619 0.00 0.0 39.83 3.58 R
4291 4440 1.625315 AGGTCTTGCACACTATGAGCA 59.375 47.619 0.00 0.0 41.97 4.26 R
5594 5847 0.592637 TGTGCTCACAAGGAAATGCG 59.407 50.000 0.00 0.0 38.56 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 9.883142 TTGAATATTTGTGGTCTTTTTCAAAGT 57.117 25.926 0.00 0.00 34.17 2.66
51 52 9.883142 TGAATATTTGTGGTCTTTTTCAAAGTT 57.117 25.926 0.00 0.00 34.17 2.66
54 55 7.977789 ATTTGTGGTCTTTTTCAAAGTTTGT 57.022 28.000 15.08 0.00 34.17 2.83
56 57 8.888579 TTTGTGGTCTTTTTCAAAGTTTGTAA 57.111 26.923 15.08 9.36 0.00 2.41
57 58 9.495572 TTTGTGGTCTTTTTCAAAGTTTGTAAT 57.504 25.926 15.08 0.00 0.00 1.89
58 59 9.495572 TTGTGGTCTTTTTCAAAGTTTGTAATT 57.504 25.926 15.08 0.00 0.00 1.40
59 60 9.495572 TGTGGTCTTTTTCAAAGTTTGTAATTT 57.504 25.926 15.08 0.00 0.00 1.82
60 61 9.753669 GTGGTCTTTTTCAAAGTTTGTAATTTG 57.246 29.630 15.08 5.96 37.67 2.32
61 62 9.495572 TGGTCTTTTTCAAAGTTTGTAATTTGT 57.504 25.926 15.08 0.00 37.60 2.83
68 69 8.867248 TTCAAAGTTTGTAATTTGTTTTTCGC 57.133 26.923 15.08 0.00 37.60 4.70
69 70 8.018677 TCAAAGTTTGTAATTTGTTTTTCGCA 57.981 26.923 15.08 0.00 37.60 5.10
70 71 8.660373 TCAAAGTTTGTAATTTGTTTTTCGCAT 58.340 25.926 15.08 0.00 37.60 4.73
71 72 8.723260 CAAAGTTTGTAATTTGTTTTTCGCATG 58.277 29.630 7.48 0.00 32.86 4.06
72 73 7.532682 AGTTTGTAATTTGTTTTTCGCATGT 57.467 28.000 0.00 0.00 0.00 3.21
73 74 7.969314 AGTTTGTAATTTGTTTTTCGCATGTT 58.031 26.923 0.00 0.00 0.00 2.71
74 75 8.447053 AGTTTGTAATTTGTTTTTCGCATGTTT 58.553 25.926 0.00 0.00 0.00 2.83
75 76 9.690434 GTTTGTAATTTGTTTTTCGCATGTTTA 57.310 25.926 0.00 0.00 0.00 2.01
76 77 9.690434 TTTGTAATTTGTTTTTCGCATGTTTAC 57.310 25.926 0.00 0.00 0.00 2.01
77 78 8.407457 TGTAATTTGTTTTTCGCATGTTTACA 57.593 26.923 0.00 0.00 0.00 2.41
78 79 9.035607 TGTAATTTGTTTTTCGCATGTTTACAT 57.964 25.926 0.00 0.00 36.96 2.29
81 82 9.856803 AATTTGTTTTTCGCATGTTTACATAAC 57.143 25.926 0.00 0.00 34.26 1.89
82 83 6.661982 TGTTTTTCGCATGTTTACATAACG 57.338 33.333 9.80 9.80 36.81 3.18
83 84 6.200100 TGTTTTTCGCATGTTTACATAACGT 58.800 32.000 13.64 0.00 36.82 3.99
84 85 6.140895 TGTTTTTCGCATGTTTACATAACGTG 59.859 34.615 13.64 5.68 39.49 4.49
85 86 4.994220 TTCGCATGTTTACATAACGTGT 57.006 36.364 13.64 0.00 44.95 4.49
86 87 4.994220 TCGCATGTTTACATAACGTGTT 57.006 36.364 13.64 0.00 42.29 3.32
87 88 5.345609 TCGCATGTTTACATAACGTGTTT 57.654 34.783 13.64 0.00 42.29 2.83
88 89 5.140872 TCGCATGTTTACATAACGTGTTTG 58.859 37.500 13.64 0.00 42.29 2.93
89 90 4.319639 CGCATGTTTACATAACGTGTTTGG 59.680 41.667 10.50 0.00 42.29 3.28
90 91 5.216648 GCATGTTTACATAACGTGTTTGGT 58.783 37.500 10.50 0.00 42.29 3.67
91 92 5.688176 GCATGTTTACATAACGTGTTTGGTT 59.312 36.000 10.50 0.00 42.29 3.67
92 93 6.345408 GCATGTTTACATAACGTGTTTGGTTG 60.345 38.462 10.50 0.00 42.29 3.77
93 94 5.035443 TGTTTACATAACGTGTTTGGTTGC 58.965 37.500 0.00 0.00 42.29 4.17
94 95 2.785713 ACATAACGTGTTTGGTTGCC 57.214 45.000 0.00 0.00 38.01 4.52
95 96 1.338655 ACATAACGTGTTTGGTTGCCC 59.661 47.619 0.00 0.00 38.01 5.36
96 97 0.594110 ATAACGTGTTTGGTTGCCCG 59.406 50.000 0.00 0.00 0.00 6.13
97 98 2.061182 TAACGTGTTTGGTTGCCCGC 62.061 55.000 0.00 0.00 0.00 6.13
98 99 3.893763 CGTGTTTGGTTGCCCGCA 61.894 61.111 0.00 0.00 0.00 5.69
99 100 2.733945 GTGTTTGGTTGCCCGCAT 59.266 55.556 0.00 0.00 0.00 4.73
100 101 1.372872 GTGTTTGGTTGCCCGCATC 60.373 57.895 0.00 0.00 0.00 3.91
101 102 2.261361 GTTTGGTTGCCCGCATCC 59.739 61.111 9.44 9.44 36.58 3.51
102 103 2.203552 TTTGGTTGCCCGCATCCA 60.204 55.556 14.14 14.14 42.18 3.41
103 104 2.569354 TTTGGTTGCCCGCATCCAC 61.569 57.895 17.10 0.58 43.17 4.02
105 106 4.740822 GGTTGCCCGCATCCACCT 62.741 66.667 11.16 0.00 36.20 4.00
106 107 3.134127 GTTGCCCGCATCCACCTC 61.134 66.667 0.00 0.00 0.00 3.85
107 108 3.645660 TTGCCCGCATCCACCTCA 61.646 61.111 0.00 0.00 0.00 3.86
108 109 3.203086 TTGCCCGCATCCACCTCAA 62.203 57.895 0.00 0.00 0.00 3.02
109 110 3.134127 GCCCGCATCCACCTCAAC 61.134 66.667 0.00 0.00 0.00 3.18
110 111 2.438434 CCCGCATCCACCTCAACC 60.438 66.667 0.00 0.00 0.00 3.77
111 112 2.350895 CCGCATCCACCTCAACCA 59.649 61.111 0.00 0.00 0.00 3.67
112 113 1.746615 CCGCATCCACCTCAACCAG 60.747 63.158 0.00 0.00 0.00 4.00
127 128 3.291383 CAGGCCCACGCGGAAAAA 61.291 61.111 12.47 0.00 35.02 1.94
128 129 2.282887 AGGCCCACGCGGAAAAAT 60.283 55.556 12.47 0.00 35.02 1.82
129 130 2.180769 GGCCCACGCGGAAAAATC 59.819 61.111 12.47 0.00 35.02 2.17
130 131 2.340328 GGCCCACGCGGAAAAATCT 61.340 57.895 12.47 0.00 35.02 2.40
131 132 1.584495 GCCCACGCGGAAAAATCTT 59.416 52.632 12.47 0.00 0.00 2.40
132 133 0.732538 GCCCACGCGGAAAAATCTTG 60.733 55.000 12.47 0.00 0.00 3.02
133 134 0.109319 CCCACGCGGAAAAATCTTGG 60.109 55.000 12.47 5.22 0.00 3.61
134 135 0.732538 CCACGCGGAAAAATCTTGGC 60.733 55.000 12.47 0.00 0.00 4.52
135 136 0.732538 CACGCGGAAAAATCTTGGCC 60.733 55.000 12.47 0.00 0.00 5.36
136 137 1.153842 CGCGGAAAAATCTTGGCCC 60.154 57.895 0.00 0.00 0.00 5.80
137 138 1.153842 GCGGAAAAATCTTGGCCCG 60.154 57.895 0.00 0.00 39.88 6.13
138 139 1.873270 GCGGAAAAATCTTGGCCCGT 61.873 55.000 0.00 0.00 39.18 5.28
139 140 0.601057 CGGAAAAATCTTGGCCCGTT 59.399 50.000 0.00 0.00 33.02 4.44
140 141 1.000394 CGGAAAAATCTTGGCCCGTTT 60.000 47.619 0.00 0.00 33.02 3.60
141 142 2.412870 GGAAAAATCTTGGCCCGTTTG 58.587 47.619 0.00 0.00 0.00 2.93
142 143 2.036604 GGAAAAATCTTGGCCCGTTTGA 59.963 45.455 0.00 0.00 0.00 2.69
143 144 3.306710 GGAAAAATCTTGGCCCGTTTGAT 60.307 43.478 0.00 0.00 0.00 2.57
144 145 4.314961 GAAAAATCTTGGCCCGTTTGATT 58.685 39.130 0.00 0.02 0.00 2.57
145 146 3.317603 AAATCTTGGCCCGTTTGATTG 57.682 42.857 0.00 0.00 0.00 2.67
146 147 1.185315 ATCTTGGCCCGTTTGATTGG 58.815 50.000 0.00 0.00 0.00 3.16
147 148 1.079888 CTTGGCCCGTTTGATTGGC 60.080 57.895 0.00 0.00 44.59 4.52
148 149 1.532794 TTGGCCCGTTTGATTGGCT 60.533 52.632 0.00 0.00 44.71 4.75
149 150 0.251386 TTGGCCCGTTTGATTGGCTA 60.251 50.000 0.00 0.00 44.71 3.93
150 151 0.679640 TGGCCCGTTTGATTGGCTAG 60.680 55.000 0.00 0.00 44.71 3.42
151 152 1.384222 GGCCCGTTTGATTGGCTAGG 61.384 60.000 0.00 0.00 44.71 3.02
152 153 0.679960 GCCCGTTTGATTGGCTAGGT 60.680 55.000 0.00 0.00 42.01 3.08
153 154 1.834188 CCCGTTTGATTGGCTAGGTT 58.166 50.000 0.00 0.00 0.00 3.50
154 155 1.472480 CCCGTTTGATTGGCTAGGTTG 59.528 52.381 0.00 0.00 0.00 3.77
155 156 1.135402 CCGTTTGATTGGCTAGGTTGC 60.135 52.381 0.00 0.00 0.00 4.17
156 157 1.539388 CGTTTGATTGGCTAGGTTGCA 59.461 47.619 0.00 0.00 34.04 4.08
157 158 2.164219 CGTTTGATTGGCTAGGTTGCAT 59.836 45.455 0.00 0.00 34.04 3.96
158 159 3.731867 CGTTTGATTGGCTAGGTTGCATC 60.732 47.826 0.00 0.00 34.04 3.91
159 160 2.804986 TGATTGGCTAGGTTGCATCA 57.195 45.000 0.00 0.00 34.04 3.07
160 161 3.084536 TGATTGGCTAGGTTGCATCAA 57.915 42.857 0.00 0.00 34.04 2.57
161 162 3.429492 TGATTGGCTAGGTTGCATCAAA 58.571 40.909 0.00 0.00 34.04 2.69
162 163 3.831333 TGATTGGCTAGGTTGCATCAAAA 59.169 39.130 0.00 0.00 34.04 2.44
163 164 3.940209 TTGGCTAGGTTGCATCAAAAG 57.060 42.857 0.00 0.00 34.04 2.27
164 165 3.153369 TGGCTAGGTTGCATCAAAAGA 57.847 42.857 0.00 0.00 34.04 2.52
165 166 3.700538 TGGCTAGGTTGCATCAAAAGAT 58.299 40.909 0.00 0.00 34.04 2.40
166 167 4.088634 TGGCTAGGTTGCATCAAAAGATT 58.911 39.130 0.00 0.00 34.04 2.40
167 168 4.082081 TGGCTAGGTTGCATCAAAAGATTG 60.082 41.667 0.00 0.00 34.67 2.67
168 169 3.861689 GCTAGGTTGCATCAAAAGATTGC 59.138 43.478 0.00 0.00 36.45 3.56
169 170 3.323751 AGGTTGCATCAAAAGATTGCC 57.676 42.857 0.00 0.00 36.45 4.52
170 171 2.027837 AGGTTGCATCAAAAGATTGCCC 60.028 45.455 0.00 0.00 36.45 5.36
171 172 1.994779 GTTGCATCAAAAGATTGCCCG 59.005 47.619 0.00 0.00 36.45 6.13
172 173 0.108709 TGCATCAAAAGATTGCCCGC 60.109 50.000 0.00 0.00 36.45 6.13
173 174 0.108709 GCATCAAAAGATTGCCCGCA 60.109 50.000 0.00 0.00 36.45 5.69
174 175 1.632422 CATCAAAAGATTGCCCGCAC 58.368 50.000 0.00 0.00 36.45 5.34
175 176 0.171007 ATCAAAAGATTGCCCGCACG 59.829 50.000 0.00 0.00 36.45 5.34
176 177 0.886938 TCAAAAGATTGCCCGCACGA 60.887 50.000 0.00 0.00 36.45 4.35
177 178 0.039617 CAAAAGATTGCCCGCACGAA 60.040 50.000 0.00 0.00 0.00 3.85
178 179 0.671251 AAAAGATTGCCCGCACGAAA 59.329 45.000 0.00 0.00 0.00 3.46
179 180 0.039527 AAAGATTGCCCGCACGAAAC 60.040 50.000 0.00 0.00 0.00 2.78
180 181 0.889186 AAGATTGCCCGCACGAAACT 60.889 50.000 0.00 0.00 0.00 2.66
181 182 0.889186 AGATTGCCCGCACGAAACTT 60.889 50.000 0.00 0.00 0.00 2.66
182 183 0.800012 GATTGCCCGCACGAAACTTA 59.200 50.000 0.00 0.00 0.00 2.24
183 184 1.198178 GATTGCCCGCACGAAACTTAA 59.802 47.619 0.00 0.00 0.00 1.85
184 185 1.022735 TTGCCCGCACGAAACTTAAA 58.977 45.000 0.00 0.00 0.00 1.52
185 186 1.022735 TGCCCGCACGAAACTTAAAA 58.977 45.000 0.00 0.00 0.00 1.52
186 187 1.002251 TGCCCGCACGAAACTTAAAAG 60.002 47.619 0.00 0.00 0.00 2.27
187 188 1.681825 CCCGCACGAAACTTAAAAGC 58.318 50.000 0.00 0.00 0.00 3.51
188 189 1.002251 CCCGCACGAAACTTAAAAGCA 60.002 47.619 0.00 0.00 0.00 3.91
189 190 2.041244 CCGCACGAAACTTAAAAGCAC 58.959 47.619 0.00 0.00 0.00 4.40
190 191 2.041244 CGCACGAAACTTAAAAGCACC 58.959 47.619 0.00 0.00 0.00 5.01
191 192 2.286772 CGCACGAAACTTAAAAGCACCT 60.287 45.455 0.00 0.00 0.00 4.00
192 193 3.297472 GCACGAAACTTAAAAGCACCTC 58.703 45.455 0.00 0.00 0.00 3.85
193 194 3.003378 GCACGAAACTTAAAAGCACCTCT 59.997 43.478 0.00 0.00 0.00 3.69
194 195 4.527564 CACGAAACTTAAAAGCACCTCTG 58.472 43.478 0.00 0.00 0.00 3.35
195 196 3.564225 ACGAAACTTAAAAGCACCTCTGG 59.436 43.478 0.00 0.00 0.00 3.86
196 197 3.564225 CGAAACTTAAAAGCACCTCTGGT 59.436 43.478 0.00 0.00 35.62 4.00
197 198 4.319549 CGAAACTTAAAAGCACCTCTGGTC 60.320 45.833 0.00 0.00 31.02 4.02
198 199 3.141767 ACTTAAAAGCACCTCTGGTCC 57.858 47.619 0.00 0.00 31.02 4.46
199 200 2.711547 ACTTAAAAGCACCTCTGGTCCT 59.288 45.455 0.00 0.00 31.02 3.85
200 201 2.859165 TAAAAGCACCTCTGGTCCTG 57.141 50.000 0.00 0.00 31.02 3.86
201 202 0.111253 AAAAGCACCTCTGGTCCTGG 59.889 55.000 0.00 0.00 31.02 4.45
202 203 2.417558 AAAGCACCTCTGGTCCTGGC 62.418 60.000 0.00 0.00 31.02 4.85
203 204 3.325753 GCACCTCTGGTCCTGGCT 61.326 66.667 0.00 0.00 31.02 4.75
204 205 2.985456 CACCTCTGGTCCTGGCTC 59.015 66.667 0.00 0.00 31.02 4.70
205 206 1.611851 CACCTCTGGTCCTGGCTCT 60.612 63.158 0.00 0.00 31.02 4.09
206 207 1.611851 ACCTCTGGTCCTGGCTCTG 60.612 63.158 0.00 0.00 0.00 3.35
207 208 2.365586 CCTCTGGTCCTGGCTCTGG 61.366 68.421 0.00 0.00 0.00 3.86
208 209 1.305633 CTCTGGTCCTGGCTCTGGA 60.306 63.158 0.00 0.00 0.00 3.86
209 210 1.305633 TCTGGTCCTGGCTCTGGAG 60.306 63.158 1.85 0.00 32.29 3.86
210 211 2.284921 TGGTCCTGGCTCTGGAGG 60.285 66.667 0.00 0.00 32.29 4.30
211 212 2.039624 GGTCCTGGCTCTGGAGGA 59.960 66.667 0.00 0.00 35.93 3.71
212 213 1.613630 GGTCCTGGCTCTGGAGGAA 60.614 63.158 0.00 0.00 40.15 3.36
213 214 0.985490 GGTCCTGGCTCTGGAGGAAT 60.985 60.000 0.00 0.00 40.15 3.01
214 215 0.179936 GTCCTGGCTCTGGAGGAATG 59.820 60.000 0.00 0.00 40.15 2.67
215 216 0.984961 TCCTGGCTCTGGAGGAATGG 60.985 60.000 0.00 0.00 35.33 3.16
216 217 1.153005 CTGGCTCTGGAGGAATGGC 60.153 63.158 0.00 0.00 0.00 4.40
217 218 2.194326 GGCTCTGGAGGAATGGCC 59.806 66.667 0.00 0.00 0.00 5.36
218 219 2.203126 GCTCTGGAGGAATGGCCG 60.203 66.667 0.00 0.00 43.43 6.13
219 220 2.735772 GCTCTGGAGGAATGGCCGA 61.736 63.158 0.00 0.00 43.43 5.54
220 221 1.907739 CTCTGGAGGAATGGCCGAA 59.092 57.895 0.00 0.00 43.43 4.30
221 222 0.471617 CTCTGGAGGAATGGCCGAAT 59.528 55.000 0.00 0.00 43.43 3.34
222 223 0.469917 TCTGGAGGAATGGCCGAATC 59.530 55.000 0.00 0.00 43.43 2.52
223 224 0.181114 CTGGAGGAATGGCCGAATCA 59.819 55.000 0.00 0.00 43.43 2.57
224 225 0.181114 TGGAGGAATGGCCGAATCAG 59.819 55.000 0.00 0.00 43.43 2.90
225 226 1.169034 GGAGGAATGGCCGAATCAGC 61.169 60.000 0.00 0.00 43.43 4.26
226 227 1.502163 GAGGAATGGCCGAATCAGCG 61.502 60.000 0.00 0.00 43.43 5.18
250 251 3.518634 TTTTCACAACCAGAGCCAAAC 57.481 42.857 0.00 0.00 0.00 2.93
251 252 1.021202 TTCACAACCAGAGCCAAACG 58.979 50.000 0.00 0.00 0.00 3.60
252 253 0.179234 TCACAACCAGAGCCAAACGA 59.821 50.000 0.00 0.00 0.00 3.85
253 254 1.202758 TCACAACCAGAGCCAAACGAT 60.203 47.619 0.00 0.00 0.00 3.73
254 255 1.069022 CACAACCAGAGCCAAACGATG 60.069 52.381 0.00 0.00 0.00 3.84
255 256 0.109597 CAACCAGAGCCAAACGATGC 60.110 55.000 0.00 0.00 0.00 3.91
256 257 0.537143 AACCAGAGCCAAACGATGCA 60.537 50.000 0.00 0.00 0.00 3.96
257 258 0.537143 ACCAGAGCCAAACGATGCAA 60.537 50.000 0.00 0.00 0.00 4.08
258 259 0.109597 CCAGAGCCAAACGATGCAAC 60.110 55.000 0.00 0.00 0.00 4.17
259 260 0.877071 CAGAGCCAAACGATGCAACT 59.123 50.000 0.00 0.00 0.00 3.16
260 261 1.135859 CAGAGCCAAACGATGCAACTC 60.136 52.381 0.00 0.00 0.00 3.01
261 262 0.179215 GAGCCAAACGATGCAACTCG 60.179 55.000 8.13 8.13 44.14 4.18
269 270 1.640428 CGATGCAACTCGTGGTATGT 58.360 50.000 1.50 0.00 34.00 2.29
270 271 1.324435 CGATGCAACTCGTGGTATGTG 59.676 52.381 1.50 0.00 34.00 3.21
271 272 1.665679 GATGCAACTCGTGGTATGTGG 59.334 52.381 0.00 0.00 0.00 4.17
272 273 0.953471 TGCAACTCGTGGTATGTGGC 60.953 55.000 0.00 0.00 0.00 5.01
273 274 1.966493 GCAACTCGTGGTATGTGGCG 61.966 60.000 0.00 0.00 0.00 5.69
274 275 1.079405 AACTCGTGGTATGTGGCGG 60.079 57.895 0.00 0.00 0.00 6.13
275 276 2.890474 CTCGTGGTATGTGGCGGC 60.890 66.667 0.00 0.00 0.00 6.53
276 277 4.805231 TCGTGGTATGTGGCGGCG 62.805 66.667 0.51 0.51 0.00 6.46
278 279 4.460683 GTGGTATGTGGCGGCGGA 62.461 66.667 9.78 0.00 0.00 5.54
279 280 4.155733 TGGTATGTGGCGGCGGAG 62.156 66.667 9.78 0.00 0.00 4.63
280 281 4.910585 GGTATGTGGCGGCGGAGG 62.911 72.222 9.78 0.00 0.00 4.30
293 294 3.695606 GGAGGCTGCACGTGAGGA 61.696 66.667 22.23 0.39 0.00 3.71
294 295 2.125753 GAGGCTGCACGTGAGGAG 60.126 66.667 22.23 12.32 0.00 3.69
295 296 3.655810 GAGGCTGCACGTGAGGAGG 62.656 68.421 22.23 4.57 0.00 4.30
296 297 4.008933 GGCTGCACGTGAGGAGGT 62.009 66.667 22.23 0.00 0.00 3.85
297 298 2.740055 GCTGCACGTGAGGAGGTG 60.740 66.667 22.23 1.27 40.32 4.00
298 299 2.047844 CTGCACGTGAGGAGGTGG 60.048 66.667 22.23 0.00 38.23 4.61
299 300 2.842462 TGCACGTGAGGAGGTGGT 60.842 61.111 22.23 0.00 38.23 4.16
300 301 2.048127 GCACGTGAGGAGGTGGTC 60.048 66.667 22.23 0.00 38.23 4.02
301 302 2.574955 GCACGTGAGGAGGTGGTCT 61.575 63.158 22.23 0.00 38.23 3.85
302 303 1.587054 CACGTGAGGAGGTGGTCTC 59.413 63.158 10.90 0.00 41.71 3.36
303 304 1.972223 ACGTGAGGAGGTGGTCTCG 60.972 63.158 0.00 0.00 43.34 4.04
304 305 1.674651 CGTGAGGAGGTGGTCTCGA 60.675 63.158 0.00 0.00 43.34 4.04
305 306 1.649390 CGTGAGGAGGTGGTCTCGAG 61.649 65.000 5.93 5.93 43.34 4.04
306 307 0.322636 GTGAGGAGGTGGTCTCGAGA 60.323 60.000 12.08 12.08 43.34 4.04
307 308 0.404426 TGAGGAGGTGGTCTCGAGAA 59.596 55.000 18.55 0.00 43.34 2.87
308 309 1.099689 GAGGAGGTGGTCTCGAGAAG 58.900 60.000 18.55 0.00 43.34 2.85
309 310 0.406361 AGGAGGTGGTCTCGAGAAGT 59.594 55.000 18.55 0.00 43.34 3.01
310 311 0.812549 GGAGGTGGTCTCGAGAAGTC 59.187 60.000 18.55 10.48 43.34 3.01
311 312 1.535833 GAGGTGGTCTCGAGAAGTCA 58.464 55.000 18.55 13.03 32.18 3.41
312 313 1.200484 GAGGTGGTCTCGAGAAGTCAC 59.800 57.143 24.65 24.65 32.18 3.67
313 314 0.109689 GGTGGTCTCGAGAAGTCACG 60.110 60.000 25.15 0.00 33.89 4.35
314 315 0.592148 GTGGTCTCGAGAAGTCACGT 59.408 55.000 18.55 0.00 0.00 4.49
315 316 1.001597 GTGGTCTCGAGAAGTCACGTT 60.002 52.381 18.55 0.00 0.00 3.99
316 317 1.001706 TGGTCTCGAGAAGTCACGTTG 60.002 52.381 18.55 0.00 0.00 4.10
317 318 1.001597 GGTCTCGAGAAGTCACGTTGT 60.002 52.381 18.55 0.00 0.00 3.32
318 319 2.543238 GGTCTCGAGAAGTCACGTTGTT 60.543 50.000 18.55 0.00 0.00 2.83
319 320 3.114065 GTCTCGAGAAGTCACGTTGTTT 58.886 45.455 18.55 0.00 0.00 2.83
320 321 3.550678 GTCTCGAGAAGTCACGTTGTTTT 59.449 43.478 18.55 0.00 0.00 2.43
321 322 3.795101 TCTCGAGAAGTCACGTTGTTTTC 59.205 43.478 14.01 0.00 0.00 2.29
322 323 3.777478 TCGAGAAGTCACGTTGTTTTCT 58.223 40.909 0.00 0.00 0.00 2.52
323 324 3.550275 TCGAGAAGTCACGTTGTTTTCTG 59.450 43.478 6.20 1.48 0.00 3.02
324 325 3.550275 CGAGAAGTCACGTTGTTTTCTGA 59.450 43.478 6.20 0.00 0.00 3.27
325 326 4.032445 CGAGAAGTCACGTTGTTTTCTGAA 59.968 41.667 6.20 0.00 0.00 3.02
326 327 5.470845 AGAAGTCACGTTGTTTTCTGAAG 57.529 39.130 0.00 0.00 0.00 3.02
327 328 3.675467 AGTCACGTTGTTTTCTGAAGC 57.325 42.857 0.00 0.00 0.00 3.86
328 329 2.354821 AGTCACGTTGTTTTCTGAAGCC 59.645 45.455 0.00 0.00 0.00 4.35
329 330 1.329292 TCACGTTGTTTTCTGAAGCCG 59.671 47.619 0.00 0.00 0.00 5.52
330 331 1.063469 CACGTTGTTTTCTGAAGCCGT 59.937 47.619 0.00 0.00 0.00 5.68
331 332 1.063469 ACGTTGTTTTCTGAAGCCGTG 59.937 47.619 0.00 0.00 0.00 4.94
332 333 1.596954 CGTTGTTTTCTGAAGCCGTGG 60.597 52.381 0.00 0.00 0.00 4.94
333 334 0.383949 TTGTTTTCTGAAGCCGTGGC 59.616 50.000 1.67 1.67 42.33 5.01
334 335 0.749818 TGTTTTCTGAAGCCGTGGCA 60.750 50.000 14.29 0.00 44.88 4.92
335 336 0.598065 GTTTTCTGAAGCCGTGGCAT 59.402 50.000 14.29 0.00 44.88 4.40
336 337 1.810151 GTTTTCTGAAGCCGTGGCATA 59.190 47.619 14.29 0.00 44.88 3.14
337 338 2.192664 TTTCTGAAGCCGTGGCATAA 57.807 45.000 14.29 0.00 44.88 1.90
338 339 2.418368 TTCTGAAGCCGTGGCATAAT 57.582 45.000 14.29 0.00 44.88 1.28
339 340 2.418368 TCTGAAGCCGTGGCATAATT 57.582 45.000 14.29 0.00 44.88 1.40
340 341 3.552132 TCTGAAGCCGTGGCATAATTA 57.448 42.857 14.29 0.00 44.88 1.40
341 342 3.202906 TCTGAAGCCGTGGCATAATTAC 58.797 45.455 14.29 0.00 44.88 1.89
342 343 2.290641 CTGAAGCCGTGGCATAATTACC 59.709 50.000 14.29 0.00 44.88 2.85
343 344 1.607148 GAAGCCGTGGCATAATTACCC 59.393 52.381 14.29 0.00 44.88 3.69
344 345 0.843984 AGCCGTGGCATAATTACCCT 59.156 50.000 14.29 0.00 44.88 4.34
345 346 1.214424 AGCCGTGGCATAATTACCCTT 59.786 47.619 14.29 0.00 44.88 3.95
346 347 2.440253 AGCCGTGGCATAATTACCCTTA 59.560 45.455 14.29 0.00 44.88 2.69
347 348 2.551032 GCCGTGGCATAATTACCCTTAC 59.449 50.000 5.89 0.00 41.49 2.34
348 349 3.143728 CCGTGGCATAATTACCCTTACC 58.856 50.000 0.00 0.00 0.00 2.85
349 350 3.181448 CCGTGGCATAATTACCCTTACCT 60.181 47.826 0.00 0.00 0.00 3.08
350 351 4.457466 CGTGGCATAATTACCCTTACCTT 58.543 43.478 0.00 0.00 0.00 3.50
351 352 4.514066 CGTGGCATAATTACCCTTACCTTC 59.486 45.833 0.00 0.00 0.00 3.46
352 353 4.825634 GTGGCATAATTACCCTTACCTTCC 59.174 45.833 0.00 0.00 0.00 3.46
353 354 4.141111 TGGCATAATTACCCTTACCTTCCC 60.141 45.833 5.79 0.00 0.00 3.97
354 355 4.404640 GCATAATTACCCTTACCTTCCCC 58.595 47.826 0.00 0.00 0.00 4.81
355 356 4.751964 GCATAATTACCCTTACCTTCCCCC 60.752 50.000 0.00 0.00 0.00 5.40
356 357 3.247368 AATTACCCTTACCTTCCCCCT 57.753 47.619 0.00 0.00 0.00 4.79
357 358 2.275361 TTACCCTTACCTTCCCCCTC 57.725 55.000 0.00 0.00 0.00 4.30
358 359 1.411741 TACCCTTACCTTCCCCCTCT 58.588 55.000 0.00 0.00 0.00 3.69
359 360 0.044397 ACCCTTACCTTCCCCCTCTC 59.956 60.000 0.00 0.00 0.00 3.20
360 361 0.343726 CCCTTACCTTCCCCCTCTCT 59.656 60.000 0.00 0.00 0.00 3.10
361 362 1.693083 CCCTTACCTTCCCCCTCTCTC 60.693 61.905 0.00 0.00 0.00 3.20
362 363 1.292546 CCTTACCTTCCCCCTCTCTCT 59.707 57.143 0.00 0.00 0.00 3.10
363 364 2.673258 CTTACCTTCCCCCTCTCTCTC 58.327 57.143 0.00 0.00 0.00 3.20
364 365 2.003247 TACCTTCCCCCTCTCTCTCT 57.997 55.000 0.00 0.00 0.00 3.10
365 366 0.634465 ACCTTCCCCCTCTCTCTCTC 59.366 60.000 0.00 0.00 0.00 3.20
366 367 0.105709 CCTTCCCCCTCTCTCTCTCC 60.106 65.000 0.00 0.00 0.00 3.71
367 368 0.105709 CTTCCCCCTCTCTCTCTCCC 60.106 65.000 0.00 0.00 0.00 4.30
368 369 0.556380 TTCCCCCTCTCTCTCTCCCT 60.556 60.000 0.00 0.00 0.00 4.20
369 370 0.996762 TCCCCCTCTCTCTCTCCCTC 60.997 65.000 0.00 0.00 0.00 4.30
370 371 0.998945 CCCCCTCTCTCTCTCCCTCT 60.999 65.000 0.00 0.00 0.00 3.69
371 372 0.478507 CCCCTCTCTCTCTCCCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
372 373 1.522900 CCCTCTCTCTCTCCCTCTCT 58.477 60.000 0.00 0.00 0.00 3.10
373 374 1.421646 CCCTCTCTCTCTCCCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
374 375 2.126882 CCTCTCTCTCTCCCTCTCTCA 58.873 57.143 0.00 0.00 0.00 3.27
375 376 2.158755 CCTCTCTCTCTCCCTCTCTCAC 60.159 59.091 0.00 0.00 0.00 3.51
376 377 2.505407 CTCTCTCTCTCCCTCTCTCACA 59.495 54.545 0.00 0.00 0.00 3.58
377 378 2.238646 TCTCTCTCTCCCTCTCTCACAC 59.761 54.545 0.00 0.00 0.00 3.82
378 379 2.239654 CTCTCTCTCCCTCTCTCACACT 59.760 54.545 0.00 0.00 0.00 3.55
379 380 2.026356 TCTCTCTCCCTCTCTCACACTG 60.026 54.545 0.00 0.00 0.00 3.66
380 381 1.005332 TCTCTCCCTCTCTCACACTGG 59.995 57.143 0.00 0.00 0.00 4.00
381 382 0.613292 TCTCCCTCTCTCACACTGGC 60.613 60.000 0.00 0.00 0.00 4.85
382 383 1.943116 CTCCCTCTCTCACACTGGCG 61.943 65.000 0.00 0.00 0.00 5.69
383 384 1.979155 CCCTCTCTCACACTGGCGA 60.979 63.158 0.00 0.00 0.00 5.54
384 385 1.214062 CCTCTCTCACACTGGCGAC 59.786 63.158 0.00 0.00 0.00 5.19
385 386 1.527433 CCTCTCTCACACTGGCGACA 61.527 60.000 0.00 0.00 39.59 4.35
386 387 0.315251 CTCTCTCACACTGGCGACAA 59.685 55.000 0.00 0.00 42.06 3.18
387 388 0.032130 TCTCTCACACTGGCGACAAC 59.968 55.000 0.00 0.00 42.06 3.32
388 389 1.278172 CTCTCACACTGGCGACAACG 61.278 60.000 0.00 0.00 42.06 4.10
389 390 1.299850 CTCACACTGGCGACAACGA 60.300 57.895 0.00 0.00 42.06 3.85
390 391 1.278172 CTCACACTGGCGACAACGAG 61.278 60.000 0.00 0.00 42.06 4.18
391 392 2.661866 ACACTGGCGACAACGAGC 60.662 61.111 0.00 0.00 42.06 5.03
392 393 2.661537 CACTGGCGACAACGAGCA 60.662 61.111 0.00 0.00 42.06 4.26
393 394 2.108157 ACTGGCGACAACGAGCAA 59.892 55.556 0.00 0.00 42.06 3.91
394 395 1.301716 ACTGGCGACAACGAGCAAT 60.302 52.632 0.00 0.00 42.06 3.56
395 396 1.133253 CTGGCGACAACGAGCAATG 59.867 57.895 0.00 0.00 42.06 2.82
396 397 2.244436 CTGGCGACAACGAGCAATGG 62.244 60.000 0.00 0.00 42.06 3.16
397 398 2.032634 GGCGACAACGAGCAATGGA 61.033 57.895 0.00 0.00 42.66 3.41
398 399 1.132640 GCGACAACGAGCAATGGAC 59.867 57.895 0.00 0.00 42.66 4.02
399 400 1.787847 CGACAACGAGCAATGGACC 59.212 57.895 0.00 0.00 42.66 4.46
400 401 0.948623 CGACAACGAGCAATGGACCA 60.949 55.000 0.00 0.00 42.66 4.02
401 402 1.234821 GACAACGAGCAATGGACCAA 58.765 50.000 0.00 0.00 0.00 3.67
402 403 0.951558 ACAACGAGCAATGGACCAAC 59.048 50.000 0.00 0.00 0.00 3.77
403 404 0.110238 CAACGAGCAATGGACCAACG 60.110 55.000 0.00 2.72 0.00 4.10
404 405 0.250124 AACGAGCAATGGACCAACGA 60.250 50.000 0.00 0.00 0.00 3.85
405 406 0.250124 ACGAGCAATGGACCAACGAA 60.250 50.000 0.00 0.00 0.00 3.85
406 407 0.165944 CGAGCAATGGACCAACGAAC 59.834 55.000 0.00 0.00 0.00 3.95
407 408 1.523758 GAGCAATGGACCAACGAACT 58.476 50.000 0.00 0.00 0.00 3.01
408 409 1.880027 GAGCAATGGACCAACGAACTT 59.120 47.619 0.00 0.00 0.00 2.66
409 410 1.880027 AGCAATGGACCAACGAACTTC 59.120 47.619 0.00 0.00 0.00 3.01
410 411 1.606668 GCAATGGACCAACGAACTTCA 59.393 47.619 0.00 0.00 0.00 3.02
411 412 2.034053 GCAATGGACCAACGAACTTCAA 59.966 45.455 0.00 0.00 0.00 2.69
412 413 3.853307 GCAATGGACCAACGAACTTCAAG 60.853 47.826 0.00 0.00 0.00 3.02
413 414 1.961793 TGGACCAACGAACTTCAAGG 58.038 50.000 0.00 0.00 0.00 3.61
414 415 0.591659 GGACCAACGAACTTCAAGGC 59.408 55.000 0.00 0.00 0.00 4.35
415 416 0.234884 GACCAACGAACTTCAAGGCG 59.765 55.000 0.00 0.91 0.00 5.52
416 417 0.179067 ACCAACGAACTTCAAGGCGA 60.179 50.000 8.68 0.00 0.00 5.54
417 418 0.512952 CCAACGAACTTCAAGGCGAG 59.487 55.000 8.68 1.88 0.00 5.03
418 419 0.110644 CAACGAACTTCAAGGCGAGC 60.111 55.000 8.68 0.00 0.00 5.03
419 420 0.531974 AACGAACTTCAAGGCGAGCA 60.532 50.000 8.68 0.00 0.00 4.26
420 421 1.222115 ACGAACTTCAAGGCGAGCAC 61.222 55.000 8.68 0.00 0.00 4.40
421 422 1.869690 GAACTTCAAGGCGAGCACC 59.130 57.895 0.00 0.00 0.00 5.01
422 423 1.901650 GAACTTCAAGGCGAGCACCG 61.902 60.000 0.00 0.00 42.21 4.94
432 433 4.819761 GAGCACCGCCATCGAGCA 62.820 66.667 0.00 0.00 38.41 4.26
453 454 3.286751 GCTTCACCAGCGCACCAA 61.287 61.111 11.47 0.00 39.29 3.67
454 455 2.639286 CTTCACCAGCGCACCAAC 59.361 61.111 11.47 0.00 0.00 3.77
455 456 2.124529 TTCACCAGCGCACCAACA 60.125 55.556 11.47 0.00 0.00 3.33
456 457 2.121564 CTTCACCAGCGCACCAACAG 62.122 60.000 11.47 0.00 0.00 3.16
457 458 3.663176 CACCAGCGCACCAACAGG 61.663 66.667 11.47 1.74 0.00 4.00
458 459 3.872603 ACCAGCGCACCAACAGGA 61.873 61.111 11.47 0.00 0.00 3.86
459 460 3.357079 CCAGCGCACCAACAGGAC 61.357 66.667 11.47 0.00 0.00 3.85
460 461 2.281070 CAGCGCACCAACAGGACT 60.281 61.111 11.47 0.00 0.00 3.85
461 462 1.893808 CAGCGCACCAACAGGACTT 60.894 57.895 11.47 0.00 0.00 3.01
462 463 1.152963 AGCGCACCAACAGGACTTT 60.153 52.632 11.47 0.00 0.00 2.66
463 464 0.107831 AGCGCACCAACAGGACTTTA 59.892 50.000 11.47 0.00 0.00 1.85
464 465 0.517316 GCGCACCAACAGGACTTTAG 59.483 55.000 0.30 0.00 0.00 1.85
465 466 0.517316 CGCACCAACAGGACTTTAGC 59.483 55.000 0.00 0.00 0.00 3.09
466 467 1.604604 GCACCAACAGGACTTTAGCA 58.395 50.000 0.00 0.00 0.00 3.49
467 468 1.953686 GCACCAACAGGACTTTAGCAA 59.046 47.619 0.00 0.00 0.00 3.91
468 469 2.558359 GCACCAACAGGACTTTAGCAAT 59.442 45.455 0.00 0.00 0.00 3.56
469 470 3.612479 GCACCAACAGGACTTTAGCAATG 60.612 47.826 0.00 0.00 0.00 2.82
470 471 3.057315 CACCAACAGGACTTTAGCAATGG 60.057 47.826 0.00 0.00 0.00 3.16
471 472 2.094545 CCAACAGGACTTTAGCAATGGC 60.095 50.000 0.00 0.00 41.61 4.40
487 488 4.426313 GCGGTAAGCCCTTGCCCT 62.426 66.667 9.17 0.00 41.50 5.19
488 489 2.124695 CGGTAAGCCCTTGCCCTC 60.125 66.667 9.17 0.00 41.50 4.30
489 490 2.670148 CGGTAAGCCCTTGCCCTCT 61.670 63.158 9.17 0.00 41.50 3.69
490 491 1.224870 GGTAAGCCCTTGCCCTCTC 59.775 63.158 4.03 0.00 39.09 3.20
491 492 1.275421 GGTAAGCCCTTGCCCTCTCT 61.275 60.000 4.03 0.00 39.09 3.10
501 502 4.158579 CCCTTGCCCTCTCTTTCAATTTAC 59.841 45.833 0.00 0.00 0.00 2.01
516 517 5.559227 TCAATTTACTGCATTCGATTCACG 58.441 37.500 0.00 0.00 44.09 4.35
533 534 4.857871 TCACGCTTTAGATTGGATTTCG 57.142 40.909 0.00 0.00 0.00 3.46
556 558 1.293924 ATCGATTCAAGCGCAAGGAG 58.706 50.000 11.47 0.00 38.28 3.69
559 561 1.061711 CGATTCAAGCGCAAGGAGAAG 59.938 52.381 11.47 0.00 38.28 2.85
570 572 4.260538 GCGCAAGGAGAAGATTGAATACAG 60.261 45.833 0.30 0.00 38.28 2.74
575 577 4.410555 AGGAGAAGATTGAATACAGGGGTC 59.589 45.833 0.00 0.00 0.00 4.46
576 578 4.164221 GGAGAAGATTGAATACAGGGGTCA 59.836 45.833 0.00 0.00 0.00 4.02
581 583 0.419865 TGAATACAGGGGTCAGGGGA 59.580 55.000 0.00 0.00 0.00 4.81
583 585 2.136026 GAATACAGGGGTCAGGGGATT 58.864 52.381 0.00 0.00 0.00 3.01
586 588 2.287194 AGGGGTCAGGGGATTGGG 60.287 66.667 0.00 0.00 0.00 4.12
589 591 1.781001 GGGTCAGGGGATTGGGTTT 59.219 57.895 0.00 0.00 0.00 3.27
604 606 1.644786 GGTTTGCCCACTCGATTCGG 61.645 60.000 6.18 0.00 0.00 4.30
611 613 0.172578 CCACTCGATTCGGCACAGTA 59.827 55.000 6.18 0.00 0.00 2.74
642 645 2.457366 ACTAGGCCGACTGAAACAAG 57.543 50.000 0.00 0.00 0.00 3.16
647 650 0.730494 GCCGACTGAAACAAGCATGC 60.730 55.000 10.51 10.51 0.00 4.06
668 671 1.577328 ATGTTGGCAAAGTCCGAGCG 61.577 55.000 0.00 0.00 0.00 5.03
675 678 1.464189 GCAAAGTCCGAGCGATCAAAC 60.464 52.381 0.00 0.00 0.00 2.93
724 744 1.135315 CAATGCACATTCCGGTCCTTG 60.135 52.381 0.00 0.00 0.00 3.61
785 805 1.165270 GCAGCGTGATAACAAGGGTT 58.835 50.000 0.00 0.00 41.06 4.11
840 860 7.425606 AGAGTTTGTTATTTCTCGCAACAATT 58.574 30.769 0.00 0.00 40.68 2.32
843 863 8.327429 AGTTTGTTATTTCTCGCAACAATTTTG 58.673 29.630 0.00 0.00 40.68 2.44
1240 1264 0.541063 TACGGCCTTCTCACTGGTCA 60.541 55.000 0.00 0.00 0.00 4.02
1251 1275 4.887748 TCTCACTGGTCAGTTCTTGATTC 58.112 43.478 0.20 0.00 40.20 2.52
1405 1430 2.492088 GCCTTGTACATGGTTCCCTTTC 59.508 50.000 24.35 5.99 0.00 2.62
1406 1431 3.814316 GCCTTGTACATGGTTCCCTTTCT 60.814 47.826 24.35 0.00 0.00 2.52
1407 1432 4.407365 CCTTGTACATGGTTCCCTTTCTT 58.593 43.478 17.64 0.00 0.00 2.52
1408 1433 4.832823 CCTTGTACATGGTTCCCTTTCTTT 59.167 41.667 17.64 0.00 0.00 2.52
1445 1470 7.230510 GCATTATGTGAACTAAATGATACCCCA 59.769 37.037 10.55 0.00 32.29 4.96
1449 1474 3.055021 TGAACTAAATGATACCCCACGCA 60.055 43.478 0.00 0.00 0.00 5.24
1455 1480 1.453015 GATACCCCACGCATTGCCA 60.453 57.895 2.41 0.00 0.00 4.92
1476 1501 7.681679 TGCCACGGAATTGGATATATAGTTTA 58.318 34.615 0.00 0.00 39.24 2.01
1635 1664 8.668353 CACTTAGAATACAGTAATGCATGTTGT 58.332 33.333 0.00 8.05 0.00 3.32
1660 1689 4.020751 TGGTAGAGGATTCTCATGCTATGC 60.021 45.833 3.21 0.00 42.34 3.14
1662 1691 4.540359 AGAGGATTCTCATGCTATGCTC 57.460 45.455 3.21 12.06 42.34 4.26
1724 1768 3.708890 ACAACAATGCACACATGTTGAG 58.291 40.909 28.54 13.75 42.06 3.02
1755 1799 7.422465 AGAAATAGTGCAGATCTCTCTCTTT 57.578 36.000 0.00 0.76 0.00 2.52
1858 1909 4.444056 TGTGGTAAAACGTTTACGACTAGC 59.556 41.667 15.03 12.23 43.02 3.42
1871 1922 2.143122 CGACTAGCTTTCCTTGTTGCA 58.857 47.619 0.00 0.00 29.51 4.08
2012 2063 1.994463 GGGACAGCTGGTTCCTGAT 59.006 57.895 19.93 0.00 42.55 2.90
2363 2416 2.370189 AGTAAGCTTGAACACTGCCTCT 59.630 45.455 9.86 0.00 0.00 3.69
2381 2434 3.999663 CCTCTAGACCTTGAAAACTGCTG 59.000 47.826 0.00 0.00 0.00 4.41
2409 2462 5.473162 GCTACCCTTAGCCTAACTAGTAGTC 59.527 48.000 2.58 0.00 44.55 2.59
2725 2854 8.517878 TGAAATTAAGAGTGTAAGTACTAGCGT 58.482 33.333 0.00 0.00 0.00 5.07
2777 2906 2.004733 CCGTCGAAAATGTAGGTTCCC 58.995 52.381 0.00 0.00 0.00 3.97
3210 3348 0.032952 GCCTGGTCTAACGTGTGTCA 59.967 55.000 0.00 0.00 0.00 3.58
3493 3631 4.276926 AGACACTGTTCTTTTCTGGAATGC 59.723 41.667 0.00 0.00 0.00 3.56
3802 3947 6.319658 CACATTCATGCACCTAATAACTCCTT 59.680 38.462 0.00 0.00 0.00 3.36
3851 3996 1.376295 GCCCAAATGCTTTGCCTGG 60.376 57.895 0.00 0.00 39.31 4.45
3893 4039 7.255730 GGCTCAATACAAAGGATATGCTTCAAT 60.256 37.037 10.17 1.92 0.00 2.57
3937 4083 4.043200 GTCAGCCGTGCCCTTTGC 62.043 66.667 0.00 0.00 41.77 3.68
4117 4264 3.052082 CCTGACGGTGGCTGCTTG 61.052 66.667 0.00 0.00 0.00 4.01
4138 4285 6.509418 TTGGAATATTTGGAAACGAAGGAG 57.491 37.500 0.00 0.00 37.08 3.69
4139 4286 5.566469 TGGAATATTTGGAAACGAAGGAGT 58.434 37.500 0.00 0.00 37.08 3.85
4168 4315 8.729805 AAGATCTTTCATTGCTCCTAGTAAAG 57.270 34.615 0.88 0.00 0.00 1.85
4257 4406 1.834263 TCCCTCTTAGAGCTTGGCTTC 59.166 52.381 3.26 0.00 39.88 3.86
4270 4419 3.370527 GCTTGGCTTCATACCCTTGAGTA 60.371 47.826 0.00 0.00 0.00 2.59
4274 4423 5.216622 TGGCTTCATACCCTTGAGTATACT 58.783 41.667 4.68 4.68 31.66 2.12
4291 4440 9.656323 TGAGTATACTCCTTATGGAAGTTGTAT 57.344 33.333 26.37 10.36 42.66 2.29
4355 4504 2.695666 AGAGTTGCCGATGTAGTATGCT 59.304 45.455 0.00 0.00 0.00 3.79
4446 4595 4.416516 TCACTCTTTCCTGGTCTCACATA 58.583 43.478 0.00 0.00 0.00 2.29
4698 4847 4.110482 ACTTCACGTTGTCTATATTCCGC 58.890 43.478 0.00 0.00 0.00 5.54
4735 4897 3.581332 ACAGATTAGTTTGAAGTCGGGGA 59.419 43.478 0.00 0.00 0.00 4.81
4837 4999 8.500753 TTAGTTTCTGTTCAGAAGTTGCTTAA 57.499 30.769 13.69 6.78 0.00 1.85
4921 5084 7.486551 TCTTGTTGTTGTTAAATTCCTTGTTCG 59.513 33.333 0.00 0.00 0.00 3.95
5423 5674 2.094338 TGTGTTGCACAACTTCATTGCA 60.094 40.909 14.16 0.00 41.69 4.08
5445 5696 7.946207 TGCATGTATTTTGTTTTACTCTGGAA 58.054 30.769 0.00 0.00 0.00 3.53
5482 5733 4.039004 TCTGATGCTAGCTGAGGATTCTTC 59.961 45.833 17.23 0.00 36.13 2.87
5505 5756 6.583160 TCGTGTGACGATTTTGTAACATTAC 58.417 36.000 0.00 0.00 46.73 1.89
5542 5793 4.082787 GGCTGCAGAACTGTATAAGCAAAA 60.083 41.667 20.43 0.00 31.45 2.44
5594 5847 7.730364 TGGAAAGAAGAACAAACTGAGATAC 57.270 36.000 0.00 0.00 0.00 2.24
5595 5848 6.423905 TGGAAAGAAGAACAAACTGAGATACG 59.576 38.462 0.00 0.00 0.00 3.06
5599 5852 5.934625 AGAAGAACAAACTGAGATACGCATT 59.065 36.000 0.00 0.00 0.00 3.56
5752 6007 4.836825 ACTTTCGACCACATGATCATCTT 58.163 39.130 4.86 0.00 0.00 2.40
5822 6084 0.681733 TTGAGATCCTCATAGGCGCC 59.318 55.000 21.89 21.89 40.39 6.53
6006 6268 3.020274 TGTTACACAAAGCAAGCAAGGA 58.980 40.909 0.00 0.00 0.00 3.36
6020 6282 5.177511 GCAAGCAAGGAAATCCAAGTAAAAC 59.822 40.000 1.67 0.00 38.89 2.43
6022 6284 4.022329 AGCAAGGAAATCCAAGTAAAACGG 60.022 41.667 1.67 0.00 38.89 4.44
6030 6294 4.497473 TCCAAGTAAAACGGAAGCATTG 57.503 40.909 0.00 0.00 0.00 2.82
6036 6300 7.042119 CCAAGTAAAACGGAAGCATTGAAAATT 60.042 33.333 0.00 0.00 0.00 1.82
6104 6370 3.045601 GCCTATATGTGCCAAGACGAT 57.954 47.619 0.00 0.00 0.00 3.73
6112 6378 3.064207 TGTGCCAAGACGATGTAAGTTC 58.936 45.455 0.00 0.00 0.00 3.01
6129 6395 3.786635 AGTTCGAACATATCTGCAGGAC 58.213 45.455 28.78 0.00 0.00 3.85
6134 6400 3.658709 GAACATATCTGCAGGACCTAGC 58.341 50.000 15.13 0.96 0.00 3.42
6163 6429 4.330620 GTCTGGACAACAAACGAACAGTAA 59.669 41.667 0.00 0.00 0.00 2.24
6165 6431 5.235616 TCTGGACAACAAACGAACAGTAATC 59.764 40.000 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 9.883142 ACTTTGAAAAAGACCACAAATATTCAA 57.117 25.926 6.73 0.00 34.72 2.69
25 26 9.883142 AACTTTGAAAAAGACCACAAATATTCA 57.117 25.926 6.73 0.00 33.01 2.57
28 29 9.665719 ACAAACTTTGAAAAAGACCACAAATAT 57.334 25.926 8.55 0.00 33.01 1.28
30 31 7.977789 ACAAACTTTGAAAAAGACCACAAAT 57.022 28.000 8.55 0.00 33.01 2.32
31 32 8.888579 TTACAAACTTTGAAAAAGACCACAAA 57.111 26.923 8.55 0.00 0.00 2.83
32 33 9.495572 AATTACAAACTTTGAAAAAGACCACAA 57.504 25.926 8.55 0.00 0.00 3.33
33 34 9.495572 AAATTACAAACTTTGAAAAAGACCACA 57.504 25.926 8.55 0.00 0.00 4.17
34 35 9.753669 CAAATTACAAACTTTGAAAAAGACCAC 57.246 29.630 8.55 0.00 34.93 4.16
35 36 9.495572 ACAAATTACAAACTTTGAAAAAGACCA 57.504 25.926 8.55 0.00 36.19 4.02
42 43 9.319223 GCGAAAAACAAATTACAAACTTTGAAA 57.681 25.926 8.55 0.00 36.19 2.69
43 44 8.495949 TGCGAAAAACAAATTACAAACTTTGAA 58.504 25.926 8.55 0.00 36.19 2.69
44 45 8.018677 TGCGAAAAACAAATTACAAACTTTGA 57.981 26.923 8.55 0.00 36.19 2.69
45 46 8.723260 CATGCGAAAAACAAATTACAAACTTTG 58.277 29.630 0.00 0.00 38.13 2.77
46 47 8.447053 ACATGCGAAAAACAAATTACAAACTTT 58.553 25.926 0.00 0.00 0.00 2.66
47 48 7.969314 ACATGCGAAAAACAAATTACAAACTT 58.031 26.923 0.00 0.00 0.00 2.66
48 49 7.532682 ACATGCGAAAAACAAATTACAAACT 57.467 28.000 0.00 0.00 0.00 2.66
49 50 8.594418 AAACATGCGAAAAACAAATTACAAAC 57.406 26.923 0.00 0.00 0.00 2.93
50 51 9.690434 GTAAACATGCGAAAAACAAATTACAAA 57.310 25.926 0.00 0.00 0.00 2.83
51 52 8.869897 TGTAAACATGCGAAAAACAAATTACAA 58.130 25.926 0.00 0.00 0.00 2.41
52 53 8.407457 TGTAAACATGCGAAAAACAAATTACA 57.593 26.923 0.00 0.00 0.00 2.41
55 56 9.856803 GTTATGTAAACATGCGAAAAACAAATT 57.143 25.926 5.85 0.00 37.15 1.82
56 57 8.211181 CGTTATGTAAACATGCGAAAAACAAAT 58.789 29.630 5.85 0.00 37.85 2.32
57 58 7.220300 ACGTTATGTAAACATGCGAAAAACAAA 59.780 29.630 20.58 0.00 38.46 2.83
58 59 6.691818 ACGTTATGTAAACATGCGAAAAACAA 59.308 30.769 20.58 0.00 38.46 2.83
59 60 6.140895 CACGTTATGTAAACATGCGAAAAACA 59.859 34.615 20.58 0.00 38.46 2.83
60 61 6.141053 ACACGTTATGTAAACATGCGAAAAAC 59.859 34.615 20.58 9.95 40.88 2.43
61 62 6.200100 ACACGTTATGTAAACATGCGAAAAA 58.800 32.000 20.58 0.89 40.88 1.94
62 63 5.749620 ACACGTTATGTAAACATGCGAAAA 58.250 33.333 20.58 1.47 40.88 2.29
63 64 5.345609 ACACGTTATGTAAACATGCGAAA 57.654 34.783 20.58 1.77 40.88 3.46
64 65 4.994220 ACACGTTATGTAAACATGCGAA 57.006 36.364 20.58 2.06 40.88 4.70
65 66 4.994220 AACACGTTATGTAAACATGCGA 57.006 36.364 20.58 1.85 42.31 5.10
66 67 4.319639 CCAAACACGTTATGTAAACATGCG 59.680 41.667 15.40 15.40 42.31 4.73
67 68 5.216648 ACCAAACACGTTATGTAAACATGC 58.783 37.500 5.85 0.00 42.31 4.06
68 69 6.345408 GCAACCAAACACGTTATGTAAACATG 60.345 38.462 5.85 0.00 42.31 3.21
69 70 5.688176 GCAACCAAACACGTTATGTAAACAT 59.312 36.000 0.63 0.63 42.31 2.71
70 71 5.035443 GCAACCAAACACGTTATGTAAACA 58.965 37.500 0.00 0.00 42.31 2.83
71 72 4.441744 GGCAACCAAACACGTTATGTAAAC 59.558 41.667 0.00 0.00 42.31 2.01
72 73 4.608951 GGCAACCAAACACGTTATGTAAA 58.391 39.130 0.00 0.00 42.31 2.01
73 74 4.226113 GGCAACCAAACACGTTATGTAA 57.774 40.909 0.00 0.00 42.31 2.41
74 75 3.900388 GGCAACCAAACACGTTATGTA 57.100 42.857 0.00 0.00 42.31 2.29
75 76 2.785713 GGCAACCAAACACGTTATGT 57.214 45.000 0.00 0.00 46.42 2.29
89 90 3.134127 GAGGTGGATGCGGGCAAC 61.134 66.667 0.00 0.00 0.00 4.17
90 91 3.203086 TTGAGGTGGATGCGGGCAA 62.203 57.895 0.00 0.00 0.00 4.52
91 92 3.645660 TTGAGGTGGATGCGGGCA 61.646 61.111 0.00 0.00 0.00 5.36
92 93 3.134127 GTTGAGGTGGATGCGGGC 61.134 66.667 0.00 0.00 0.00 6.13
93 94 2.438434 GGTTGAGGTGGATGCGGG 60.438 66.667 0.00 0.00 0.00 6.13
94 95 1.746615 CTGGTTGAGGTGGATGCGG 60.747 63.158 0.00 0.00 0.00 5.69
95 96 1.746615 CCTGGTTGAGGTGGATGCG 60.747 63.158 0.00 0.00 37.02 4.73
96 97 2.048603 GCCTGGTTGAGGTGGATGC 61.049 63.158 0.00 0.00 44.97 3.91
97 98 1.379044 GGCCTGGTTGAGGTGGATG 60.379 63.158 0.00 0.00 44.97 3.51
98 99 2.616458 GGGCCTGGTTGAGGTGGAT 61.616 63.158 0.84 0.00 44.97 3.41
99 100 3.256960 GGGCCTGGTTGAGGTGGA 61.257 66.667 0.84 0.00 44.97 4.02
100 101 3.579302 TGGGCCTGGTTGAGGTGG 61.579 66.667 4.53 0.00 44.97 4.61
101 102 2.282462 GTGGGCCTGGTTGAGGTG 60.282 66.667 4.53 0.00 44.97 4.00
102 103 3.953775 CGTGGGCCTGGTTGAGGT 61.954 66.667 4.53 0.00 44.97 3.85
110 111 2.542211 GATTTTTCCGCGTGGGCCTG 62.542 60.000 16.49 0.00 35.02 4.85
111 112 2.282887 ATTTTTCCGCGTGGGCCT 60.283 55.556 16.49 0.00 35.02 5.19
112 113 1.873270 AAGATTTTTCCGCGTGGGCC 61.873 55.000 16.49 0.00 35.02 5.80
113 114 0.732538 CAAGATTTTTCCGCGTGGGC 60.733 55.000 16.49 0.00 35.24 5.36
114 115 0.109319 CCAAGATTTTTCCGCGTGGG 60.109 55.000 16.49 1.03 35.24 4.61
115 116 0.732538 GCCAAGATTTTTCCGCGTGG 60.733 55.000 9.28 9.28 34.83 4.94
116 117 0.732538 GGCCAAGATTTTTCCGCGTG 60.733 55.000 4.92 0.00 0.00 5.34
117 118 1.584495 GGCCAAGATTTTTCCGCGT 59.416 52.632 4.92 0.00 0.00 6.01
118 119 1.153842 GGGCCAAGATTTTTCCGCG 60.154 57.895 4.39 0.00 0.00 6.46
119 120 1.153842 CGGGCCAAGATTTTTCCGC 60.154 57.895 4.39 0.00 0.00 5.54
120 121 0.601057 AACGGGCCAAGATTTTTCCG 59.399 50.000 4.39 0.00 42.69 4.30
121 122 2.036604 TCAAACGGGCCAAGATTTTTCC 59.963 45.455 4.39 0.00 0.00 3.13
122 123 3.378911 TCAAACGGGCCAAGATTTTTC 57.621 42.857 4.39 0.00 0.00 2.29
123 124 4.064388 CAATCAAACGGGCCAAGATTTTT 58.936 39.130 4.39 0.00 0.00 1.94
124 125 3.556843 CCAATCAAACGGGCCAAGATTTT 60.557 43.478 4.39 0.00 0.00 1.82
125 126 2.028203 CCAATCAAACGGGCCAAGATTT 60.028 45.455 4.39 0.00 0.00 2.17
126 127 1.550072 CCAATCAAACGGGCCAAGATT 59.450 47.619 4.39 4.14 0.00 2.40
127 128 1.185315 CCAATCAAACGGGCCAAGAT 58.815 50.000 4.39 0.00 0.00 2.40
128 129 1.531739 GCCAATCAAACGGGCCAAGA 61.532 55.000 4.39 0.00 41.90 3.02
129 130 1.079888 GCCAATCAAACGGGCCAAG 60.080 57.895 4.39 0.00 41.90 3.61
130 131 3.055580 GCCAATCAAACGGGCCAA 58.944 55.556 4.39 0.00 41.90 4.52
134 135 1.472480 CAACCTAGCCAATCAAACGGG 59.528 52.381 0.00 0.00 0.00 5.28
135 136 1.135402 GCAACCTAGCCAATCAAACGG 60.135 52.381 0.00 0.00 0.00 4.44
136 137 1.539388 TGCAACCTAGCCAATCAAACG 59.461 47.619 0.00 0.00 0.00 3.60
137 138 3.193267 TGATGCAACCTAGCCAATCAAAC 59.807 43.478 0.00 0.00 27.91 2.93
138 139 3.429492 TGATGCAACCTAGCCAATCAAA 58.571 40.909 0.00 0.00 27.91 2.69
139 140 3.084536 TGATGCAACCTAGCCAATCAA 57.915 42.857 0.00 0.00 27.91 2.57
140 141 2.804986 TGATGCAACCTAGCCAATCA 57.195 45.000 0.00 0.00 0.00 2.57
141 142 4.158394 TCTTTTGATGCAACCTAGCCAATC 59.842 41.667 0.00 0.00 0.00 2.67
142 143 4.088634 TCTTTTGATGCAACCTAGCCAAT 58.911 39.130 0.00 0.00 0.00 3.16
143 144 3.495331 TCTTTTGATGCAACCTAGCCAA 58.505 40.909 0.00 0.00 0.00 4.52
144 145 3.153369 TCTTTTGATGCAACCTAGCCA 57.847 42.857 0.00 0.00 0.00 4.75
145 146 4.427312 CAATCTTTTGATGCAACCTAGCC 58.573 43.478 0.00 0.00 39.48 3.93
146 147 3.861689 GCAATCTTTTGATGCAACCTAGC 59.138 43.478 0.00 0.00 39.48 3.42
147 148 4.427312 GGCAATCTTTTGATGCAACCTAG 58.573 43.478 0.00 0.00 39.48 3.02
148 149 3.195396 GGGCAATCTTTTGATGCAACCTA 59.805 43.478 0.00 0.00 39.48 3.08
149 150 2.027837 GGGCAATCTTTTGATGCAACCT 60.028 45.455 0.00 0.00 39.48 3.50
150 151 2.349590 GGGCAATCTTTTGATGCAACC 58.650 47.619 0.00 0.00 39.48 3.77
151 152 1.994779 CGGGCAATCTTTTGATGCAAC 59.005 47.619 0.00 0.00 39.48 4.17
152 153 1.672441 GCGGGCAATCTTTTGATGCAA 60.672 47.619 0.00 0.00 39.48 4.08
153 154 0.108709 GCGGGCAATCTTTTGATGCA 60.109 50.000 0.00 0.00 39.48 3.96
154 155 0.108709 TGCGGGCAATCTTTTGATGC 60.109 50.000 0.00 0.00 39.48 3.91
155 156 1.632422 GTGCGGGCAATCTTTTGATG 58.368 50.000 0.00 0.00 39.48 3.07
156 157 0.171007 CGTGCGGGCAATCTTTTGAT 59.829 50.000 0.00 0.00 41.73 2.57
157 158 0.886938 TCGTGCGGGCAATCTTTTGA 60.887 50.000 0.00 0.00 34.60 2.69
158 159 0.039617 TTCGTGCGGGCAATCTTTTG 60.040 50.000 0.00 0.00 35.85 2.44
159 160 0.671251 TTTCGTGCGGGCAATCTTTT 59.329 45.000 0.00 0.00 0.00 2.27
160 161 0.039527 GTTTCGTGCGGGCAATCTTT 60.040 50.000 0.00 0.00 0.00 2.52
161 162 0.889186 AGTTTCGTGCGGGCAATCTT 60.889 50.000 0.00 0.00 0.00 2.40
162 163 0.889186 AAGTTTCGTGCGGGCAATCT 60.889 50.000 0.00 0.00 0.00 2.40
163 164 0.800012 TAAGTTTCGTGCGGGCAATC 59.200 50.000 0.00 0.00 0.00 2.67
164 165 1.240256 TTAAGTTTCGTGCGGGCAAT 58.760 45.000 0.00 0.00 0.00 3.56
165 166 1.022735 TTTAAGTTTCGTGCGGGCAA 58.977 45.000 0.00 0.00 0.00 4.52
166 167 1.002251 CTTTTAAGTTTCGTGCGGGCA 60.002 47.619 0.00 0.00 0.00 5.36
167 168 1.681825 CTTTTAAGTTTCGTGCGGGC 58.318 50.000 0.00 0.00 0.00 6.13
168 169 1.002251 TGCTTTTAAGTTTCGTGCGGG 60.002 47.619 0.00 0.00 0.00 6.13
169 170 2.041244 GTGCTTTTAAGTTTCGTGCGG 58.959 47.619 0.00 0.00 0.00 5.69
170 171 2.041244 GGTGCTTTTAAGTTTCGTGCG 58.959 47.619 0.00 0.00 0.00 5.34
171 172 3.003378 AGAGGTGCTTTTAAGTTTCGTGC 59.997 43.478 0.00 0.00 0.00 5.34
172 173 4.527564 CAGAGGTGCTTTTAAGTTTCGTG 58.472 43.478 0.00 0.00 0.00 4.35
173 174 3.564225 CCAGAGGTGCTTTTAAGTTTCGT 59.436 43.478 0.00 0.00 0.00 3.85
174 175 3.564225 ACCAGAGGTGCTTTTAAGTTTCG 59.436 43.478 0.00 0.00 32.98 3.46
175 176 4.023107 GGACCAGAGGTGCTTTTAAGTTTC 60.023 45.833 0.03 0.00 40.95 2.78
176 177 3.889538 GGACCAGAGGTGCTTTTAAGTTT 59.110 43.478 0.03 0.00 40.95 2.66
177 178 3.487372 GGACCAGAGGTGCTTTTAAGTT 58.513 45.455 0.03 0.00 40.95 2.66
178 179 3.141767 GGACCAGAGGTGCTTTTAAGT 57.858 47.619 0.03 0.00 40.95 2.24
186 187 3.322318 GAGCCAGGACCAGAGGTGC 62.322 68.421 0.00 0.00 44.57 5.01
187 188 1.611851 AGAGCCAGGACCAGAGGTG 60.612 63.158 0.00 0.00 35.25 4.00
188 189 1.611851 CAGAGCCAGGACCAGAGGT 60.612 63.158 0.00 0.00 39.44 3.85
189 190 2.365586 CCAGAGCCAGGACCAGAGG 61.366 68.421 0.00 0.00 0.00 3.69
190 191 1.305633 TCCAGAGCCAGGACCAGAG 60.306 63.158 0.00 0.00 0.00 3.35
191 192 1.305633 CTCCAGAGCCAGGACCAGA 60.306 63.158 0.00 0.00 0.00 3.86
192 193 2.365586 CCTCCAGAGCCAGGACCAG 61.366 68.421 0.00 0.00 30.32 4.00
193 194 2.284921 CCTCCAGAGCCAGGACCA 60.285 66.667 0.00 0.00 30.32 4.02
194 195 0.985490 ATTCCTCCAGAGCCAGGACC 60.985 60.000 0.00 0.00 38.61 4.46
195 196 0.179936 CATTCCTCCAGAGCCAGGAC 59.820 60.000 0.00 0.00 38.61 3.85
196 197 0.984961 CCATTCCTCCAGAGCCAGGA 60.985 60.000 0.00 0.00 37.00 3.86
197 198 1.530771 CCATTCCTCCAGAGCCAGG 59.469 63.158 0.00 0.00 0.00 4.45
198 199 1.153005 GCCATTCCTCCAGAGCCAG 60.153 63.158 0.00 0.00 0.00 4.85
199 200 2.683465 GGCCATTCCTCCAGAGCCA 61.683 63.158 0.00 0.00 40.20 4.75
200 201 2.194326 GGCCATTCCTCCAGAGCC 59.806 66.667 0.00 0.00 0.00 4.70
201 202 2.203126 CGGCCATTCCTCCAGAGC 60.203 66.667 2.24 0.00 0.00 4.09
202 203 0.471617 ATTCGGCCATTCCTCCAGAG 59.528 55.000 2.24 0.00 0.00 3.35
203 204 0.469917 GATTCGGCCATTCCTCCAGA 59.530 55.000 2.24 0.00 0.00 3.86
204 205 0.181114 TGATTCGGCCATTCCTCCAG 59.819 55.000 2.24 0.00 0.00 3.86
205 206 0.181114 CTGATTCGGCCATTCCTCCA 59.819 55.000 2.24 0.00 0.00 3.86
206 207 1.169034 GCTGATTCGGCCATTCCTCC 61.169 60.000 2.24 0.00 0.00 4.30
207 208 1.502163 CGCTGATTCGGCCATTCCTC 61.502 60.000 11.82 0.00 31.00 3.71
208 209 1.524621 CGCTGATTCGGCCATTCCT 60.525 57.895 11.82 0.00 31.00 3.36
209 210 2.546494 CCGCTGATTCGGCCATTCC 61.546 63.158 11.82 0.00 43.18 3.01
210 211 3.025619 CCGCTGATTCGGCCATTC 58.974 61.111 11.82 0.00 43.18 2.67
229 230 3.674682 CGTTTGGCTCTGGTTGTGAAAAA 60.675 43.478 0.00 0.00 0.00 1.94
230 231 2.159310 CGTTTGGCTCTGGTTGTGAAAA 60.159 45.455 0.00 0.00 0.00 2.29
231 232 1.403679 CGTTTGGCTCTGGTTGTGAAA 59.596 47.619 0.00 0.00 0.00 2.69
232 233 1.021202 CGTTTGGCTCTGGTTGTGAA 58.979 50.000 0.00 0.00 0.00 3.18
233 234 0.179234 TCGTTTGGCTCTGGTTGTGA 59.821 50.000 0.00 0.00 0.00 3.58
234 235 1.069022 CATCGTTTGGCTCTGGTTGTG 60.069 52.381 0.00 0.00 0.00 3.33
235 236 1.238439 CATCGTTTGGCTCTGGTTGT 58.762 50.000 0.00 0.00 0.00 3.32
236 237 0.109597 GCATCGTTTGGCTCTGGTTG 60.110 55.000 0.00 0.00 0.00 3.77
237 238 0.537143 TGCATCGTTTGGCTCTGGTT 60.537 50.000 0.00 0.00 0.00 3.67
238 239 0.537143 TTGCATCGTTTGGCTCTGGT 60.537 50.000 0.00 0.00 0.00 4.00
239 240 0.109597 GTTGCATCGTTTGGCTCTGG 60.110 55.000 0.00 0.00 0.00 3.86
240 241 0.877071 AGTTGCATCGTTTGGCTCTG 59.123 50.000 0.00 0.00 0.00 3.35
241 242 1.160137 GAGTTGCATCGTTTGGCTCT 58.840 50.000 0.00 0.00 0.00 4.09
242 243 0.179215 CGAGTTGCATCGTTTGGCTC 60.179 55.000 1.50 0.00 37.91 4.70
243 244 1.868997 CGAGTTGCATCGTTTGGCT 59.131 52.632 1.50 0.00 37.91 4.75
244 245 4.440214 CGAGTTGCATCGTTTGGC 57.560 55.556 1.50 0.00 37.91 4.52
251 252 1.665679 CCACATACCACGAGTTGCATC 59.334 52.381 0.00 0.00 0.00 3.91
252 253 1.737838 CCACATACCACGAGTTGCAT 58.262 50.000 0.00 0.00 0.00 3.96
253 254 0.953471 GCCACATACCACGAGTTGCA 60.953 55.000 0.00 0.00 0.00 4.08
254 255 1.794222 GCCACATACCACGAGTTGC 59.206 57.895 0.00 0.00 0.00 4.17
255 256 1.358725 CCGCCACATACCACGAGTTG 61.359 60.000 0.00 0.00 0.00 3.16
256 257 1.079405 CCGCCACATACCACGAGTT 60.079 57.895 0.00 0.00 0.00 3.01
257 258 2.577059 CCGCCACATACCACGAGT 59.423 61.111 0.00 0.00 0.00 4.18
258 259 2.890474 GCCGCCACATACCACGAG 60.890 66.667 0.00 0.00 0.00 4.18
259 260 4.805231 CGCCGCCACATACCACGA 62.805 66.667 0.00 0.00 0.00 4.35
261 262 4.460683 TCCGCCGCCACATACCAC 62.461 66.667 0.00 0.00 0.00 4.16
262 263 4.155733 CTCCGCCGCCACATACCA 62.156 66.667 0.00 0.00 0.00 3.25
263 264 4.910585 CCTCCGCCGCCACATACC 62.911 72.222 0.00 0.00 0.00 2.73
276 277 3.655810 CTCCTCACGTGCAGCCTCC 62.656 68.421 11.67 0.00 0.00 4.30
277 278 2.125753 CTCCTCACGTGCAGCCTC 60.126 66.667 11.67 0.00 0.00 4.70
278 279 3.699894 CCTCCTCACGTGCAGCCT 61.700 66.667 11.67 0.00 0.00 4.58
279 280 4.008933 ACCTCCTCACGTGCAGCC 62.009 66.667 11.67 0.00 0.00 4.85
280 281 2.740055 CACCTCCTCACGTGCAGC 60.740 66.667 11.67 0.00 0.00 5.25
281 282 2.047844 CCACCTCCTCACGTGCAG 60.048 66.667 11.67 9.24 0.00 4.41
282 283 2.842462 ACCACCTCCTCACGTGCA 60.842 61.111 11.67 0.00 0.00 4.57
283 284 2.048127 GACCACCTCCTCACGTGC 60.048 66.667 11.67 0.00 0.00 5.34
284 285 1.587054 GAGACCACCTCCTCACGTG 59.413 63.158 9.94 9.94 35.87 4.49
285 286 1.972223 CGAGACCACCTCCTCACGT 60.972 63.158 0.00 0.00 38.71 4.49
286 287 1.649390 CTCGAGACCACCTCCTCACG 61.649 65.000 6.58 0.00 38.71 4.35
287 288 0.322636 TCTCGAGACCACCTCCTCAC 60.323 60.000 12.08 0.00 38.71 3.51
288 289 0.404426 TTCTCGAGACCACCTCCTCA 59.596 55.000 16.36 0.00 38.71 3.86
289 290 1.099689 CTTCTCGAGACCACCTCCTC 58.900 60.000 16.36 0.00 38.71 3.71
290 291 0.406361 ACTTCTCGAGACCACCTCCT 59.594 55.000 16.36 0.00 38.71 3.69
291 292 0.812549 GACTTCTCGAGACCACCTCC 59.187 60.000 16.36 0.00 38.71 4.30
292 293 1.200484 GTGACTTCTCGAGACCACCTC 59.800 57.143 16.36 5.90 38.55 3.85
293 294 1.249407 GTGACTTCTCGAGACCACCT 58.751 55.000 16.36 0.00 31.33 4.00
294 295 0.109689 CGTGACTTCTCGAGACCACC 60.110 60.000 24.28 13.21 35.14 4.61
295 296 0.592148 ACGTGACTTCTCGAGACCAC 59.408 55.000 16.36 20.22 36.76 4.16
296 297 1.001706 CAACGTGACTTCTCGAGACCA 60.002 52.381 16.36 10.77 36.76 4.02
297 298 1.001597 ACAACGTGACTTCTCGAGACC 60.002 52.381 16.36 8.13 36.76 3.85
298 299 2.402640 ACAACGTGACTTCTCGAGAC 57.597 50.000 16.36 4.43 36.76 3.36
299 300 3.431922 AAACAACGTGACTTCTCGAGA 57.568 42.857 12.08 12.08 36.76 4.04
300 301 3.797256 AGAAAACAACGTGACTTCTCGAG 59.203 43.478 5.93 5.93 36.76 4.04
301 302 3.550275 CAGAAAACAACGTGACTTCTCGA 59.450 43.478 7.64 0.00 36.76 4.04
302 303 3.550275 TCAGAAAACAACGTGACTTCTCG 59.450 43.478 0.00 0.00 38.62 4.04
303 304 5.464965 TTCAGAAAACAACGTGACTTCTC 57.535 39.130 0.00 0.00 0.00 2.87
304 305 4.201822 GCTTCAGAAAACAACGTGACTTCT 60.202 41.667 0.00 0.00 0.00 2.85
305 306 4.029043 GCTTCAGAAAACAACGTGACTTC 58.971 43.478 0.00 0.00 0.00 3.01
306 307 3.181500 GGCTTCAGAAAACAACGTGACTT 60.181 43.478 0.00 0.00 0.00 3.01
307 308 2.354821 GGCTTCAGAAAACAACGTGACT 59.645 45.455 0.00 0.00 0.00 3.41
308 309 2.716398 GGCTTCAGAAAACAACGTGAC 58.284 47.619 0.00 0.00 0.00 3.67
309 310 1.329292 CGGCTTCAGAAAACAACGTGA 59.671 47.619 0.00 0.00 0.00 4.35
310 311 1.063469 ACGGCTTCAGAAAACAACGTG 59.937 47.619 0.00 0.00 31.60 4.49
311 312 1.063469 CACGGCTTCAGAAAACAACGT 59.937 47.619 0.00 0.00 0.00 3.99
312 313 1.596954 CCACGGCTTCAGAAAACAACG 60.597 52.381 0.00 0.00 0.00 4.10
313 314 1.864029 GCCACGGCTTCAGAAAACAAC 60.864 52.381 0.00 0.00 38.26 3.32
314 315 0.383949 GCCACGGCTTCAGAAAACAA 59.616 50.000 0.00 0.00 38.26 2.83
315 316 0.749818 TGCCACGGCTTCAGAAAACA 60.750 50.000 9.92 0.00 42.51 2.83
316 317 0.598065 ATGCCACGGCTTCAGAAAAC 59.402 50.000 9.92 0.00 42.51 2.43
317 318 2.192664 TATGCCACGGCTTCAGAAAA 57.807 45.000 9.92 0.00 42.51 2.29
318 319 2.192664 TTATGCCACGGCTTCAGAAA 57.807 45.000 9.92 0.00 42.51 2.52
319 320 2.418368 ATTATGCCACGGCTTCAGAA 57.582 45.000 9.92 0.00 42.51 3.02
320 321 2.418368 AATTATGCCACGGCTTCAGA 57.582 45.000 9.92 0.00 42.51 3.27
321 322 2.290641 GGTAATTATGCCACGGCTTCAG 59.709 50.000 9.92 0.00 42.51 3.02
322 323 2.294074 GGTAATTATGCCACGGCTTCA 58.706 47.619 9.92 0.00 42.51 3.02
323 324 1.607148 GGGTAATTATGCCACGGCTTC 59.393 52.381 9.92 0.00 42.51 3.86
324 325 1.214424 AGGGTAATTATGCCACGGCTT 59.786 47.619 9.92 5.61 42.51 4.35
325 326 0.843984 AGGGTAATTATGCCACGGCT 59.156 50.000 9.92 0.00 42.51 5.52
326 327 1.687563 AAGGGTAATTATGCCACGGC 58.312 50.000 0.00 0.00 42.35 5.68
327 328 3.143728 GGTAAGGGTAATTATGCCACGG 58.856 50.000 0.00 0.00 31.96 4.94
328 329 4.081322 AGGTAAGGGTAATTATGCCACG 57.919 45.455 0.00 0.00 31.96 4.94
329 330 4.825634 GGAAGGTAAGGGTAATTATGCCAC 59.174 45.833 0.00 0.00 31.96 5.01
330 331 4.141111 GGGAAGGTAAGGGTAATTATGCCA 60.141 45.833 0.00 0.00 31.96 4.92
331 332 4.404640 GGGAAGGTAAGGGTAATTATGCC 58.595 47.826 0.00 0.00 0.00 4.40
332 333 4.404640 GGGGAAGGTAAGGGTAATTATGC 58.595 47.826 0.00 0.00 0.00 3.14
333 334 4.668335 AGGGGGAAGGTAAGGGTAATTATG 59.332 45.833 0.00 0.00 0.00 1.90
334 335 4.918273 GAGGGGGAAGGTAAGGGTAATTAT 59.082 45.833 0.00 0.00 0.00 1.28
335 336 4.014018 AGAGGGGGAAGGTAAGGGTAATTA 60.014 45.833 0.00 0.00 0.00 1.40
336 337 3.128848 GAGGGGGAAGGTAAGGGTAATT 58.871 50.000 0.00 0.00 0.00 1.40
337 338 2.324424 AGAGGGGGAAGGTAAGGGTAAT 59.676 50.000 0.00 0.00 0.00 1.89
338 339 1.732247 AGAGGGGGAAGGTAAGGGTAA 59.268 52.381 0.00 0.00 0.00 2.85
339 340 1.293153 GAGAGGGGGAAGGTAAGGGTA 59.707 57.143 0.00 0.00 0.00 3.69
340 341 0.044397 GAGAGGGGGAAGGTAAGGGT 59.956 60.000 0.00 0.00 0.00 4.34
341 342 0.343726 AGAGAGGGGGAAGGTAAGGG 59.656 60.000 0.00 0.00 0.00 3.95
342 343 1.292546 AGAGAGAGGGGGAAGGTAAGG 59.707 57.143 0.00 0.00 0.00 2.69
343 344 2.246327 AGAGAGAGAGGGGGAAGGTAAG 59.754 54.545 0.00 0.00 0.00 2.34
344 345 2.245287 GAGAGAGAGAGGGGGAAGGTAA 59.755 54.545 0.00 0.00 0.00 2.85
345 346 1.854280 GAGAGAGAGAGGGGGAAGGTA 59.146 57.143 0.00 0.00 0.00 3.08
346 347 0.634465 GAGAGAGAGAGGGGGAAGGT 59.366 60.000 0.00 0.00 0.00 3.50
347 348 0.105709 GGAGAGAGAGAGGGGGAAGG 60.106 65.000 0.00 0.00 0.00 3.46
348 349 0.105709 GGGAGAGAGAGAGGGGGAAG 60.106 65.000 0.00 0.00 0.00 3.46
349 350 0.556380 AGGGAGAGAGAGAGGGGGAA 60.556 60.000 0.00 0.00 0.00 3.97
350 351 0.996762 GAGGGAGAGAGAGAGGGGGA 60.997 65.000 0.00 0.00 0.00 4.81
351 352 0.998945 AGAGGGAGAGAGAGAGGGGG 60.999 65.000 0.00 0.00 0.00 5.40
352 353 0.478507 GAGAGGGAGAGAGAGAGGGG 59.521 65.000 0.00 0.00 0.00 4.79
353 354 1.421646 GAGAGAGGGAGAGAGAGAGGG 59.578 61.905 0.00 0.00 0.00 4.30
354 355 2.126882 TGAGAGAGGGAGAGAGAGAGG 58.873 57.143 0.00 0.00 0.00 3.69
355 356 2.505407 TGTGAGAGAGGGAGAGAGAGAG 59.495 54.545 0.00 0.00 0.00 3.20
356 357 2.238646 GTGTGAGAGAGGGAGAGAGAGA 59.761 54.545 0.00 0.00 0.00 3.10
357 358 2.239654 AGTGTGAGAGAGGGAGAGAGAG 59.760 54.545 0.00 0.00 0.00 3.20
358 359 2.026356 CAGTGTGAGAGAGGGAGAGAGA 60.026 54.545 0.00 0.00 0.00 3.10
359 360 2.368439 CAGTGTGAGAGAGGGAGAGAG 58.632 57.143 0.00 0.00 0.00 3.20
360 361 1.005332 CCAGTGTGAGAGAGGGAGAGA 59.995 57.143 0.00 0.00 0.00 3.10
361 362 1.473258 CCAGTGTGAGAGAGGGAGAG 58.527 60.000 0.00 0.00 0.00 3.20
362 363 0.613292 GCCAGTGTGAGAGAGGGAGA 60.613 60.000 0.00 0.00 0.00 3.71
363 364 1.896694 GCCAGTGTGAGAGAGGGAG 59.103 63.158 0.00 0.00 0.00 4.30
364 365 1.979155 CGCCAGTGTGAGAGAGGGA 60.979 63.158 0.00 0.00 0.00 4.20
365 366 1.979155 TCGCCAGTGTGAGAGAGGG 60.979 63.158 0.00 0.00 0.00 4.30
366 367 1.214062 GTCGCCAGTGTGAGAGAGG 59.786 63.158 0.00 0.00 0.00 3.69
367 368 0.315251 TTGTCGCCAGTGTGAGAGAG 59.685 55.000 0.00 0.00 0.00 3.20
368 369 0.032130 GTTGTCGCCAGTGTGAGAGA 59.968 55.000 0.00 0.00 0.00 3.10
369 370 1.278172 CGTTGTCGCCAGTGTGAGAG 61.278 60.000 0.00 0.00 0.00 3.20
370 371 1.299850 CGTTGTCGCCAGTGTGAGA 60.300 57.895 0.00 0.00 0.00 3.27
371 372 1.278172 CTCGTTGTCGCCAGTGTGAG 61.278 60.000 0.00 0.00 36.96 3.51
372 373 1.299850 CTCGTTGTCGCCAGTGTGA 60.300 57.895 0.00 0.00 36.96 3.58
373 374 2.943345 GCTCGTTGTCGCCAGTGTG 61.943 63.158 0.00 0.00 36.96 3.82
374 375 2.661866 GCTCGTTGTCGCCAGTGT 60.662 61.111 0.00 0.00 36.96 3.55
375 376 1.568612 ATTGCTCGTTGTCGCCAGTG 61.569 55.000 0.00 0.00 36.96 3.66
376 377 1.301716 ATTGCTCGTTGTCGCCAGT 60.302 52.632 0.00 0.00 36.96 4.00
377 378 1.133253 CATTGCTCGTTGTCGCCAG 59.867 57.895 0.00 0.00 36.96 4.85
378 379 2.324330 CCATTGCTCGTTGTCGCCA 61.324 57.895 0.00 0.00 36.96 5.69
379 380 2.032634 TCCATTGCTCGTTGTCGCC 61.033 57.895 0.00 0.00 36.96 5.54
380 381 1.132640 GTCCATTGCTCGTTGTCGC 59.867 57.895 0.00 0.00 36.96 5.19
381 382 0.948623 TGGTCCATTGCTCGTTGTCG 60.949 55.000 0.00 0.00 38.55 4.35
382 383 1.069227 GTTGGTCCATTGCTCGTTGTC 60.069 52.381 0.00 0.00 0.00 3.18
383 384 0.951558 GTTGGTCCATTGCTCGTTGT 59.048 50.000 0.00 0.00 0.00 3.32
384 385 0.110238 CGTTGGTCCATTGCTCGTTG 60.110 55.000 0.00 0.00 0.00 4.10
385 386 0.250124 TCGTTGGTCCATTGCTCGTT 60.250 50.000 0.00 0.00 0.00 3.85
386 387 0.250124 TTCGTTGGTCCATTGCTCGT 60.250 50.000 0.00 0.00 0.00 4.18
387 388 0.165944 GTTCGTTGGTCCATTGCTCG 59.834 55.000 0.00 0.00 0.00 5.03
388 389 1.523758 AGTTCGTTGGTCCATTGCTC 58.476 50.000 0.00 0.00 0.00 4.26
389 390 1.880027 GAAGTTCGTTGGTCCATTGCT 59.120 47.619 0.00 0.00 0.00 3.91
390 391 1.606668 TGAAGTTCGTTGGTCCATTGC 59.393 47.619 0.00 0.00 0.00 3.56
391 392 3.304659 CCTTGAAGTTCGTTGGTCCATTG 60.305 47.826 0.00 0.00 0.00 2.82
392 393 2.884639 CCTTGAAGTTCGTTGGTCCATT 59.115 45.455 0.00 0.00 0.00 3.16
393 394 2.504367 CCTTGAAGTTCGTTGGTCCAT 58.496 47.619 0.00 0.00 0.00 3.41
394 395 1.961793 CCTTGAAGTTCGTTGGTCCA 58.038 50.000 0.00 0.00 0.00 4.02
395 396 0.591659 GCCTTGAAGTTCGTTGGTCC 59.408 55.000 0.00 0.00 0.00 4.46
396 397 0.234884 CGCCTTGAAGTTCGTTGGTC 59.765 55.000 0.00 0.00 0.00 4.02
397 398 0.179067 TCGCCTTGAAGTTCGTTGGT 60.179 50.000 0.00 0.00 0.00 3.67
398 399 0.512952 CTCGCCTTGAAGTTCGTTGG 59.487 55.000 0.00 1.65 0.00 3.77
399 400 0.110644 GCTCGCCTTGAAGTTCGTTG 60.111 55.000 0.00 0.00 0.00 4.10
400 401 0.531974 TGCTCGCCTTGAAGTTCGTT 60.532 50.000 0.00 0.00 0.00 3.85
401 402 1.069090 TGCTCGCCTTGAAGTTCGT 59.931 52.632 0.00 0.00 0.00 3.85
402 403 1.493311 GTGCTCGCCTTGAAGTTCG 59.507 57.895 0.00 0.00 0.00 3.95
403 404 1.869690 GGTGCTCGCCTTGAAGTTC 59.130 57.895 0.00 0.00 0.00 3.01
404 405 1.961277 CGGTGCTCGCCTTGAAGTT 60.961 57.895 0.00 0.00 0.00 2.66
405 406 2.357517 CGGTGCTCGCCTTGAAGT 60.358 61.111 0.00 0.00 0.00 3.01
415 416 4.819761 TGCTCGATGGCGGTGCTC 62.820 66.667 0.00 0.00 37.90 4.26
437 438 2.121564 CTGTTGGTGCGCTGGTGAAG 62.122 60.000 9.73 0.00 0.00 3.02
438 439 2.124529 TGTTGGTGCGCTGGTGAA 60.125 55.556 9.73 0.00 0.00 3.18
439 440 2.591429 CTGTTGGTGCGCTGGTGA 60.591 61.111 9.73 0.00 0.00 4.02
440 441 3.663176 CCTGTTGGTGCGCTGGTG 61.663 66.667 9.73 0.00 0.00 4.17
441 442 3.872603 TCCTGTTGGTGCGCTGGT 61.873 61.111 9.73 0.00 34.23 4.00
442 443 3.357079 GTCCTGTTGGTGCGCTGG 61.357 66.667 9.73 0.00 34.23 4.85
443 444 1.447317 AAAGTCCTGTTGGTGCGCTG 61.447 55.000 9.73 0.00 34.23 5.18
444 445 0.107831 TAAAGTCCTGTTGGTGCGCT 59.892 50.000 9.73 0.00 34.23 5.92
445 446 0.517316 CTAAAGTCCTGTTGGTGCGC 59.483 55.000 0.00 0.00 34.23 6.09
446 447 0.517316 GCTAAAGTCCTGTTGGTGCG 59.483 55.000 0.00 0.00 34.23 5.34
447 448 1.604604 TGCTAAAGTCCTGTTGGTGC 58.395 50.000 0.00 0.00 34.23 5.01
448 449 3.057315 CCATTGCTAAAGTCCTGTTGGTG 60.057 47.826 0.00 0.00 34.23 4.17
449 450 3.157087 CCATTGCTAAAGTCCTGTTGGT 58.843 45.455 0.00 0.00 34.23 3.67
450 451 2.094545 GCCATTGCTAAAGTCCTGTTGG 60.095 50.000 0.00 0.00 33.53 3.77
451 452 2.414559 CGCCATTGCTAAAGTCCTGTTG 60.415 50.000 0.00 0.00 34.43 3.33
452 453 1.812571 CGCCATTGCTAAAGTCCTGTT 59.187 47.619 0.00 0.00 34.43 3.16
453 454 1.453155 CGCCATTGCTAAAGTCCTGT 58.547 50.000 0.00 0.00 34.43 4.00
454 455 0.734889 CCGCCATTGCTAAAGTCCTG 59.265 55.000 0.00 0.00 34.43 3.86
455 456 0.328258 ACCGCCATTGCTAAAGTCCT 59.672 50.000 0.00 0.00 34.43 3.85
456 457 2.032680 TACCGCCATTGCTAAAGTCC 57.967 50.000 0.00 0.00 34.43 3.85
457 458 2.223272 GCTTACCGCCATTGCTAAAGTC 60.223 50.000 0.00 0.00 34.43 3.01
458 459 1.743394 GCTTACCGCCATTGCTAAAGT 59.257 47.619 0.00 0.00 34.43 2.66
459 460 2.475200 GCTTACCGCCATTGCTAAAG 57.525 50.000 0.00 0.00 34.43 1.85
470 471 4.426313 AGGGCAAGGGCTTACCGC 62.426 66.667 0.00 0.00 46.96 5.68
471 472 2.124695 GAGGGCAAGGGCTTACCG 60.125 66.667 0.00 0.00 46.96 4.02
472 473 1.224870 GAGAGGGCAAGGGCTTACC 59.775 63.158 0.00 0.00 40.87 2.85
473 474 0.621082 AAGAGAGGGCAAGGGCTTAC 59.379 55.000 0.00 0.00 40.87 2.34
474 475 1.282157 GAAAGAGAGGGCAAGGGCTTA 59.718 52.381 0.00 0.00 40.87 3.09
475 476 0.038890 GAAAGAGAGGGCAAGGGCTT 59.961 55.000 0.00 0.00 40.87 4.35
476 477 1.136329 TGAAAGAGAGGGCAAGGGCT 61.136 55.000 0.00 0.00 40.87 5.19
477 478 0.251341 TTGAAAGAGAGGGCAAGGGC 60.251 55.000 0.00 0.00 40.13 5.19
478 479 2.521547 ATTGAAAGAGAGGGCAAGGG 57.478 50.000 0.00 0.00 0.00 3.95
479 480 5.012893 AGTAAATTGAAAGAGAGGGCAAGG 58.987 41.667 0.00 0.00 0.00 3.61
480 481 5.620879 GCAGTAAATTGAAAGAGAGGGCAAG 60.621 44.000 0.00 0.00 0.00 4.01
481 482 4.218417 GCAGTAAATTGAAAGAGAGGGCAA 59.782 41.667 0.00 0.00 0.00 4.52
482 483 3.758554 GCAGTAAATTGAAAGAGAGGGCA 59.241 43.478 0.00 0.00 0.00 5.36
483 484 3.758554 TGCAGTAAATTGAAAGAGAGGGC 59.241 43.478 0.00 0.00 0.00 5.19
484 485 6.521151 AATGCAGTAAATTGAAAGAGAGGG 57.479 37.500 0.00 0.00 0.00 4.30
485 486 6.092670 TCGAATGCAGTAAATTGAAAGAGAGG 59.907 38.462 0.00 0.00 0.00 3.69
486 487 7.065216 TCGAATGCAGTAAATTGAAAGAGAG 57.935 36.000 0.00 0.00 0.00 3.20
487 488 7.615582 ATCGAATGCAGTAAATTGAAAGAGA 57.384 32.000 0.00 0.00 0.00 3.10
488 489 7.964559 TGAATCGAATGCAGTAAATTGAAAGAG 59.035 33.333 0.00 0.00 0.00 2.85
489 490 7.750458 GTGAATCGAATGCAGTAAATTGAAAGA 59.250 33.333 0.00 0.00 0.00 2.52
490 491 7.253092 CGTGAATCGAATGCAGTAAATTGAAAG 60.253 37.037 0.00 0.00 42.86 2.62
491 492 6.522855 CGTGAATCGAATGCAGTAAATTGAAA 59.477 34.615 0.00 0.00 42.86 2.69
501 502 2.532531 AAAGCGTGAATCGAATGCAG 57.467 45.000 2.84 0.00 42.86 4.41
516 517 6.201044 TCGATTCTCGAAATCCAATCTAAAGC 59.799 38.462 11.96 0.00 46.90 3.51
533 534 2.286067 CCTTGCGCTTGAATCGATTCTC 60.286 50.000 32.08 21.45 37.67 2.87
545 546 2.479566 TCAATCTTCTCCTTGCGCTT 57.520 45.000 9.73 0.00 0.00 4.68
548 549 4.272018 CCTGTATTCAATCTTCTCCTTGCG 59.728 45.833 0.00 0.00 0.00 4.85
551 552 4.790790 ACCCCTGTATTCAATCTTCTCCTT 59.209 41.667 0.00 0.00 0.00 3.36
556 558 4.455606 CCTGACCCCTGTATTCAATCTTC 58.544 47.826 0.00 0.00 0.00 2.87
559 561 2.158608 CCCCTGACCCCTGTATTCAATC 60.159 54.545 0.00 0.00 0.00 2.67
570 572 1.811025 AAACCCAATCCCCTGACCCC 61.811 60.000 0.00 0.00 0.00 4.95
575 577 3.712287 GGCAAACCCAATCCCCTG 58.288 61.111 0.00 0.00 0.00 4.45
586 588 1.794222 CCGAATCGAGTGGGCAAAC 59.206 57.895 3.36 0.00 0.00 2.93
604 606 0.878416 TTTTGCCATCGGTACTGTGC 59.122 50.000 0.64 4.33 0.00 4.57
611 613 2.868253 GCCTAGTTTTGCCATCGGT 58.132 52.632 0.00 0.00 0.00 4.69
631 633 3.645884 ACATTGCATGCTTGTTTCAGTC 58.354 40.909 20.33 0.00 0.00 3.51
642 645 1.461897 GACTTTGCCAACATTGCATGC 59.538 47.619 11.82 11.82 38.76 4.06
647 650 1.666888 GCTCGGACTTTGCCAACATTG 60.667 52.381 0.00 0.00 0.00 2.82
651 654 1.298859 ATCGCTCGGACTTTGCCAAC 61.299 55.000 0.00 0.00 0.00 3.77
656 659 1.798223 TGTTTGATCGCTCGGACTTTG 59.202 47.619 0.00 0.00 0.00 2.77
660 663 0.438830 GTGTGTTTGATCGCTCGGAC 59.561 55.000 0.00 0.00 0.00 4.79
668 671 3.035942 GTTCTTGTGCGTGTGTTTGATC 58.964 45.455 0.00 0.00 0.00 2.92
675 678 2.101209 GACCGGTTCTTGTGCGTGTG 62.101 60.000 9.42 0.00 0.00 3.82
724 744 0.820871 TTTGGTGGTCAGTGTTTGCC 59.179 50.000 0.00 0.00 0.00 4.52
772 792 8.934023 ACTGAAAATAAGAACCCTTGTTATCA 57.066 30.769 0.00 0.00 33.42 2.15
785 805 9.621629 TTTCTAACAAGTGGACTGAAAATAAGA 57.378 29.630 0.00 0.00 0.00 2.10
840 860 7.132863 CGGAAAGGAAAACAAAACAAAACAAA 58.867 30.769 0.00 0.00 0.00 2.83
843 863 6.230849 ACGGAAAGGAAAACAAAACAAAAC 57.769 33.333 0.00 0.00 0.00 2.43
961 982 0.999712 GGGAGAAGGGGGATTCACAA 59.000 55.000 0.00 0.00 0.00 3.33
1029 1050 1.751924 GGCGGTAAGAGAGATGTGACT 59.248 52.381 0.00 0.00 0.00 3.41
1240 1264 6.708054 CAGCCTATAATTCCGAATCAAGAACT 59.292 38.462 0.00 0.00 0.00 3.01
1251 1275 2.872038 GCCTCCACAGCCTATAATTCCG 60.872 54.545 0.00 0.00 0.00 4.30
1321 1345 4.641645 CACTGCGTGCCCTTCCCA 62.642 66.667 0.00 0.00 0.00 4.37
1405 1430 8.804743 GTTCACATAATGCATCATGAAAGAAAG 58.195 33.333 17.03 0.00 0.00 2.62
1406 1431 8.525316 AGTTCACATAATGCATCATGAAAGAAA 58.475 29.630 17.03 0.86 0.00 2.52
1407 1432 8.058667 AGTTCACATAATGCATCATGAAAGAA 57.941 30.769 17.03 13.22 0.00 2.52
1408 1433 7.634671 AGTTCACATAATGCATCATGAAAGA 57.365 32.000 17.03 8.29 0.00 2.52
1445 1470 1.212490 CAATTCCGTGGCAATGCGT 59.788 52.632 0.00 0.00 0.00 5.24
1449 1474 6.721318 ACTATATATCCAATTCCGTGGCAAT 58.279 36.000 0.00 0.00 38.68 3.56
1635 1664 6.127225 GCATAGCATGAGAATCCTCTACCATA 60.127 42.308 0.00 0.00 40.10 2.74
1660 1689 1.332195 TCCACTAGCATCCATCCGAG 58.668 55.000 0.00 0.00 0.00 4.63
1662 1691 1.620323 TGATCCACTAGCATCCATCCG 59.380 52.381 0.00 0.00 0.00 4.18
1741 1785 7.181361 TCCTATATCCCAAAGAGAGAGATCTG 58.819 42.308 0.00 0.00 25.69 2.90
1742 1786 7.355512 TCCTATATCCCAAAGAGAGAGATCT 57.644 40.000 0.00 0.00 25.69 2.75
1744 1788 7.402650 CCAATCCTATATCCCAAAGAGAGAGAT 59.597 40.741 0.00 0.00 25.69 2.75
1755 1799 5.219739 GCTAGATCCCAATCCTATATCCCA 58.780 45.833 0.00 0.00 31.78 4.37
1871 1922 6.570378 GCAAATTACAGTGCCAGTTACTTGAT 60.570 38.462 0.00 0.00 34.58 2.57
2012 2063 4.280436 ACCCACATTAACAACGATCTCA 57.720 40.909 0.00 0.00 0.00 3.27
2073 2125 3.916359 TGTTTCTCAGTGTTACCACCA 57.084 42.857 0.00 0.00 42.88 4.17
2343 2396 2.772287 AGAGGCAGTGTTCAAGCTTAC 58.228 47.619 0.00 0.00 0.00 2.34
2363 2416 3.857157 ACCAGCAGTTTTCAAGGTCTA 57.143 42.857 0.00 0.00 0.00 2.59
2404 2457 2.548480 GTGTTTGCCCTGTTCAGACTAC 59.452 50.000 1.00 0.00 0.00 2.73
2443 2496 4.198530 CAATGGAAGTGTTTGCCCTTTTT 58.801 39.130 0.00 0.00 0.00 1.94
2444 2497 3.199727 ACAATGGAAGTGTTTGCCCTTTT 59.800 39.130 0.00 0.00 46.63 2.27
2445 2498 2.771372 ACAATGGAAGTGTTTGCCCTTT 59.229 40.909 0.00 0.00 46.63 3.11
2446 2499 2.102925 CACAATGGAAGTGTTTGCCCTT 59.897 45.455 0.00 0.00 46.63 3.95
2447 2500 1.688197 CACAATGGAAGTGTTTGCCCT 59.312 47.619 0.00 0.00 46.63 5.19
2448 2501 1.686052 TCACAATGGAAGTGTTTGCCC 59.314 47.619 0.00 0.00 46.63 5.36
2449 2502 2.545742 GGTCACAATGGAAGTGTTTGCC 60.546 50.000 0.00 0.00 46.63 4.52
2450 2503 2.100584 TGGTCACAATGGAAGTGTTTGC 59.899 45.455 0.00 0.00 46.63 3.68
2451 2504 4.383850 TTGGTCACAATGGAAGTGTTTG 57.616 40.909 0.00 0.00 46.63 2.93
2452 2505 4.947645 CATTGGTCACAATGGAAGTGTTT 58.052 39.130 11.54 0.00 46.63 2.83
2453 2506 4.589216 CATTGGTCACAATGGAAGTGTT 57.411 40.909 11.54 0.00 46.63 3.32
2777 2906 4.275936 ACCCTTTCAACAAGAAGTTCATCG 59.724 41.667 5.50 0.00 38.74 3.84
3142 3280 5.124297 TGACCGAGTCTTGTTATCGAATGTA 59.876 40.000 0.00 0.00 38.72 2.29
3210 3348 1.788229 CCCCACTTTGTTCTTTGGGT 58.212 50.000 4.83 0.00 46.57 4.51
3293 3431 3.135530 ACTCAAGGGATATCAGCCTTGTC 59.864 47.826 26.86 2.74 36.93 3.18
3493 3631 3.538634 TCAGATGATCAGACCAGCAAG 57.461 47.619 0.09 0.00 0.00 4.01
3743 3888 6.815089 AGCTCTGTACATTTTAGAGGATGAG 58.185 40.000 10.16 4.21 38.65 2.90
3851 3996 8.677300 TGTATTGAGCCTATCATTCAGAAAAAC 58.323 33.333 0.00 0.00 37.89 2.43
3893 4039 1.425066 AGGAGGCTGAAATTGGTGACA 59.575 47.619 0.00 0.00 39.83 3.58
3937 4083 2.688507 AGTCTTGACGTATGCAGGTTG 58.311 47.619 0.00 0.00 0.00 3.77
3952 4098 4.263506 CCAGAAAATGTGGTCCCTAGTCTT 60.264 45.833 0.00 0.00 0.00 3.01
4030 4176 2.041620 CCCCATCCAAGGAAAACTGAGA 59.958 50.000 0.00 0.00 0.00 3.27
4117 4264 5.163652 CCACTCCTTCGTTTCCAAATATTCC 60.164 44.000 0.00 0.00 0.00 3.01
4138 4285 3.379688 GGAGCAATGAAAGATCTTCCCAC 59.620 47.826 8.78 2.11 0.00 4.61
4139 4286 3.267812 AGGAGCAATGAAAGATCTTCCCA 59.732 43.478 8.78 10.40 0.00 4.37
4257 4406 7.674348 TCCATAAGGAGTATACTCAAGGGTATG 59.326 40.741 29.36 23.82 44.60 2.39
4270 4419 7.071196 TGAGCATACAACTTCCATAAGGAGTAT 59.929 37.037 0.00 0.00 46.74 2.12
4274 4423 5.692115 TGAGCATACAACTTCCATAAGGA 57.308 39.130 0.00 0.00 43.93 3.36
4291 4440 1.625315 AGGTCTTGCACACTATGAGCA 59.375 47.619 0.00 0.00 41.97 4.26
4318 4467 4.848357 CAACTCTACCATCCTGGAACATT 58.152 43.478 0.00 0.00 40.96 2.71
4342 4491 4.682787 TCAAGAACCAGCATACTACATCG 58.317 43.478 0.00 0.00 0.00 3.84
4355 4504 5.129634 TCATAACAAGCAGTTCAAGAACCA 58.870 37.500 9.20 0.00 42.06 3.67
4502 4651 6.653320 TGTAAAAGAACAGAAGAACACACACT 59.347 34.615 0.00 0.00 0.00 3.55
4698 4847 6.049149 ACTAATCTGTGATGTGGTAATTCGG 58.951 40.000 0.00 0.00 0.00 4.30
4785 4947 9.547753 GTTATGATGATTTAGTTCCTTAGCTCA 57.452 33.333 0.00 0.00 0.00 4.26
4854 5016 9.090692 GCAGCAGAACAAAAATATGTTAATGAT 57.909 29.630 8.29 1.31 43.31 2.45
4879 5042 2.962421 ACAAGAGCTACTCCATCTAGGC 59.038 50.000 0.00 0.00 37.29 3.93
4921 5084 7.573968 AAGTAGAATAAAGAATGCCATGGAC 57.426 36.000 18.40 7.64 0.00 4.02
5034 5284 9.950496 ACAGTGAAAGAGATACATGAAAGTTAT 57.050 29.630 0.00 0.00 0.00 1.89
5445 5696 5.627182 AGCATCAGAAATACCTGACAGAT 57.373 39.130 3.32 0.00 44.93 2.90
5482 5733 6.356417 TGTAATGTTACAAAATCGTCACACG 58.644 36.000 3.25 0.00 40.43 4.49
5594 5847 0.592637 TGTGCTCACAAGGAAATGCG 59.407 50.000 0.00 0.00 38.56 4.73
5595 5848 2.798976 TTGTGCTCACAAGGAAATGC 57.201 45.000 11.03 0.00 45.42 3.56
5653 5908 1.222936 GCATGGTCTCACTCCCTGG 59.777 63.158 0.00 0.00 0.00 4.45
5752 6007 5.308014 AGTTGAAATCATGTAGTGCTGACA 58.692 37.500 0.00 0.00 0.00 3.58
6006 6268 5.722021 ATGCTTCCGTTTTACTTGGATTT 57.278 34.783 0.00 0.00 0.00 2.17
6020 6282 3.927758 TGCATCAATTTTCAATGCTTCCG 59.072 39.130 7.92 0.00 44.75 4.30
6022 6284 6.128117 ACCATTGCATCAATTTTCAATGCTTC 60.128 34.615 7.92 0.00 44.75 3.86
6058 6323 7.438459 CCCTTTCCTCAATTTACTCGTATAGTG 59.562 40.741 0.00 0.00 39.39 2.74
6102 6368 6.074088 CCTGCAGATATGTTCGAACTTACATC 60.074 42.308 27.32 19.96 36.46 3.06
6104 6370 5.105513 TCCTGCAGATATGTTCGAACTTACA 60.106 40.000 27.32 17.23 0.00 2.41
6112 6378 2.898729 AGGTCCTGCAGATATGTTCG 57.101 50.000 17.39 0.00 0.00 3.95
6129 6395 3.260884 TGTTGTCCAGACCTTAAGCTAGG 59.739 47.826 0.62 0.62 41.31 3.02
6134 6400 4.124238 TCGTTTGTTGTCCAGACCTTAAG 58.876 43.478 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.