Multiple sequence alignment - TraesCS7A01G322000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G322000 chr7A 100.000 6917 0 0 1 6917 466209244 466202328 0.000000e+00 12774
1 TraesCS7A01G322000 chr7A 97.572 453 11 0 3094 3546 466206623 466206171 0.000000e+00 776
2 TraesCS7A01G322000 chr7A 90.650 246 21 2 6667 6911 6344366 6344610 6.690000e-85 326
3 TraesCS7A01G322000 chr7A 94.245 139 8 0 6667 6805 347389476 347389614 5.430000e-51 213
4 TraesCS7A01G322000 chr7B 91.689 2599 142 34 3842 6409 418859108 418856553 0.000000e+00 3535
5 TraesCS7A01G322000 chr7B 94.047 1999 80 16 57 2042 418861723 418859751 0.000000e+00 2996
6 TraesCS7A01G322000 chr7B 95.000 260 7 2 2038 2291 418859658 418859399 3.000000e-108 403
7 TraesCS7A01G322000 chr7B 88.449 303 13 2 3547 3827 418859396 418859094 5.140000e-91 346
8 TraesCS7A01G322000 chr7D 93.564 1911 86 14 4 1890 407718541 407716644 0.000000e+00 2813
9 TraesCS7A01G322000 chr7D 90.570 1877 111 32 4822 6667 407714810 407712969 0.000000e+00 2425
10 TraesCS7A01G322000 chr7D 96.038 959 28 4 3842 4793 407715761 407714806 0.000000e+00 1552
11 TraesCS7A01G322000 chr7D 96.125 800 30 1 2294 3093 31970824 31970026 0.000000e+00 1304
12 TraesCS7A01G322000 chr7D 96.689 453 15 0 3094 3546 31970497 31970045 0.000000e+00 754
13 TraesCS7A01G322000 chr7D 96.468 453 16 0 3094 3546 549762468 549762016 0.000000e+00 749
14 TraesCS7A01G322000 chr7D 95.785 261 5 2 2037 2291 407716311 407716051 3.860000e-112 416
15 TraesCS7A01G322000 chr7D 88.449 303 12 3 3547 3827 407716048 407715747 1.850000e-90 344
16 TraesCS7A01G322000 chr7D 89.051 137 12 3 1907 2042 407716537 407716403 4.290000e-37 167
17 TraesCS7A01G322000 chr1D 96.758 802 24 2 2294 3094 225406406 225407206 0.000000e+00 1336
18 TraesCS7A01G322000 chr1D 96.026 453 18 0 3094 3546 225406734 225407186 0.000000e+00 737
19 TraesCS7A01G322000 chr3A 96.621 799 25 2 2294 3092 476659883 476660679 0.000000e+00 1325
20 TraesCS7A01G322000 chr3A 96.468 453 15 1 3094 3546 476660210 476660661 0.000000e+00 747
21 TraesCS7A01G322000 chr6D 96.384 802 27 2 2294 3094 466511046 466511846 0.000000e+00 1319
22 TraesCS7A01G322000 chr6D 96.380 801 27 2 2294 3094 379008907 379009705 0.000000e+00 1317
23 TraesCS7A01G322000 chr6D 96.247 453 17 0 3094 3546 466511374 466511826 0.000000e+00 743
24 TraesCS7A01G322000 chr6D 96.026 453 18 0 3094 3546 379009233 379009685 0.000000e+00 737
25 TraesCS7A01G322000 chr5D 96.273 805 28 2 2290 3094 434606925 434606123 0.000000e+00 1319
26 TraesCS7A01G322000 chr5D 96.380 801 25 1 2294 3094 254524738 254523942 0.000000e+00 1315
27 TraesCS7A01G322000 chr5D 96.255 801 27 3 2294 3094 422940812 422940015 0.000000e+00 1310
28 TraesCS7A01G322000 chr5D 96.681 452 15 0 3095 3546 254524413 254523962 0.000000e+00 752
29 TraesCS7A01G322000 chr5D 96.247 453 17 0 3094 3546 482573942 482573490 0.000000e+00 743
30 TraesCS7A01G322000 chr2B 96.125 800 28 2 2294 3093 168841108 168841904 0.000000e+00 1303
31 TraesCS7A01G322000 chr5A 98.805 251 3 0 6667 6917 306467557 306467307 1.370000e-121 448
32 TraesCS7A01G322000 chr4D 94.024 251 14 1 6667 6917 166240351 166240102 5.060000e-101 379
33 TraesCS7A01G322000 chr5B 92.032 251 19 1 6667 6917 19662782 19663031 1.100000e-92 351
34 TraesCS7A01G322000 chr6A 90.079 252 19 3 6666 6917 5189026 5188781 8.650000e-84 322
35 TraesCS7A01G322000 chr6A 83.534 249 17 9 6667 6915 255213678 255213454 1.950000e-50 211
36 TraesCS7A01G322000 chr4A 89.712 243 20 3 6675 6917 622278808 622278571 8.720000e-79 305
37 TraesCS7A01G322000 chr1B 86.111 252 32 3 6666 6917 662457932 662457684 1.140000e-67 268
38 TraesCS7A01G322000 chr3B 85.200 250 12 10 6666 6915 193395703 193395927 4.170000e-57 233
39 TraesCS7A01G322000 chr3B 84.337 249 15 7 6667 6915 810648748 810648524 9.030000e-54 222
40 TraesCS7A01G322000 chr3B 84.146 246 14 8 6671 6915 19238617 19238396 1.510000e-51 215


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G322000 chr7A 466202328 466209244 6916 True 6775.000000 12774 98.786000 1 6917 2 chr7A.!!$R1 6916
1 TraesCS7A01G322000 chr7B 418856553 418861723 5170 True 1820.000000 3535 92.296250 57 6409 4 chr7B.!!$R1 6352
2 TraesCS7A01G322000 chr7D 407712969 407718541 5572 True 1286.166667 2813 92.242833 4 6667 6 chr7D.!!$R3 6663
3 TraesCS7A01G322000 chr7D 31970026 31970824 798 True 1029.000000 1304 96.407000 2294 3546 2 chr7D.!!$R2 1252
4 TraesCS7A01G322000 chr1D 225406406 225407206 800 False 1036.500000 1336 96.392000 2294 3546 2 chr1D.!!$F1 1252
5 TraesCS7A01G322000 chr3A 476659883 476660679 796 False 1036.000000 1325 96.544500 2294 3546 2 chr3A.!!$F1 1252
6 TraesCS7A01G322000 chr6D 466511046 466511846 800 False 1031.000000 1319 96.315500 2294 3546 2 chr6D.!!$F2 1252
7 TraesCS7A01G322000 chr6D 379008907 379009705 798 False 1027.000000 1317 96.203000 2294 3546 2 chr6D.!!$F1 1252
8 TraesCS7A01G322000 chr5D 434606123 434606925 802 True 1319.000000 1319 96.273000 2290 3094 1 chr5D.!!$R2 804
9 TraesCS7A01G322000 chr5D 422940015 422940812 797 True 1310.000000 1310 96.255000 2294 3094 1 chr5D.!!$R1 800
10 TraesCS7A01G322000 chr5D 254523942 254524738 796 True 1033.500000 1315 96.530500 2294 3546 2 chr5D.!!$R4 1252
11 TraesCS7A01G322000 chr2B 168841108 168841904 796 False 1303.000000 1303 96.125000 2294 3093 1 chr2B.!!$F1 799

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
388 396 0.852842 GGGGTCAATCCATCCATCCA 59.147 55.0 0.00 0.0 38.11 3.41 F
2033 2157 0.235926 GCAGAACGCAAGGAGAACAC 59.764 55.0 0.00 0.0 46.39 3.32 F
2342 2569 1.561643 TTCCAAAGCAACCAACACCA 58.438 45.0 0.00 0.0 0.00 4.17 F
3171 3401 0.108585 CCATACTCCAATCCCCACCG 59.891 60.0 0.00 0.0 0.00 4.94 F
3294 3524 0.174617 CAAGAGGACCGGAGAGAAGC 59.825 60.0 9.46 0.0 0.00 3.86 F
3835 4087 0.179094 ACAAGGTCAGAACGCGTCAA 60.179 50.0 14.44 0.0 0.00 3.18 F
5322 5619 0.107456 ACGAGGCCTGCATATTCTGG 59.893 55.0 12.00 0.0 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2342 2569 1.451936 GCCCCAGCGATCCTGTATT 59.548 57.895 9.47 0.00 40.06 1.89 R
3152 3382 0.108585 CGGTGGGGATTGGAGTATGG 59.891 60.000 0.00 0.00 0.00 2.74 R
3275 3505 0.174617 GCTTCTCTCCGGTCCTCTTG 59.825 60.000 0.00 0.00 0.00 3.02 R
4447 4708 1.032014 GGCTTGGTGCAACTGAAGAA 58.968 50.000 2.04 0.00 45.15 2.52 R
4642 4903 1.763770 CTGAGGTTGTTCCAGGGCT 59.236 57.895 0.00 0.00 39.02 5.19 R
5404 5701 0.396435 TCACCTTCACGAACATGGCT 59.604 50.000 0.00 0.00 0.00 4.75 R
6450 6771 0.038709 GGCATAAACTGGTTTGCGCA 60.039 50.000 5.66 5.66 34.67 6.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.283625 TGTTATGGAAAGTTGTTATTGCTGT 57.716 32.000 0.00 0.00 0.00 4.40
75 80 1.748122 GCTGGTGTGGATCTGCTGG 60.748 63.158 0.00 0.00 0.00 4.85
99 105 4.402155 GCCCATGAGAATGTGGAAAACATA 59.598 41.667 0.00 0.00 44.51 2.29
166 174 2.528378 ACCCCGTGGTGCTTACCT 60.528 61.111 0.00 0.00 45.58 3.08
193 201 4.043200 GCAACACCGCTGAAGGCC 62.043 66.667 0.00 0.00 37.74 5.19
311 319 2.456577 AGTTGAAACCTGCAAAGTGGT 58.543 42.857 0.00 0.00 38.35 4.16
356 364 6.016276 GGAGTTGAAAAGGTTGCAAGATCTTA 60.016 38.462 7.86 0.00 0.00 2.10
388 396 0.852842 GGGGTCAATCCATCCATCCA 59.147 55.000 0.00 0.00 38.11 3.41
389 397 1.430464 GGGGTCAATCCATCCATCCAT 59.570 52.381 0.00 0.00 38.11 3.41
390 398 2.556114 GGGGTCAATCCATCCATCCATC 60.556 54.545 0.00 0.00 38.11 3.51
391 399 2.108776 GGGTCAATCCATCCATCCATCA 59.891 50.000 0.00 0.00 38.11 3.07
501 509 6.347563 CGTTATCATCTTCGACCTAGGAGTAC 60.348 46.154 17.98 2.97 0.00 2.73
547 556 2.042464 ACCAGGTGCTCGATCATATGT 58.958 47.619 1.90 0.00 0.00 2.29
548 557 2.435805 ACCAGGTGCTCGATCATATGTT 59.564 45.455 1.90 0.00 0.00 2.71
576 585 2.100631 CCCGCATTCTCTTTCGCGT 61.101 57.895 5.77 0.00 46.02 6.01
592 601 1.068474 GCGTTGCGAGTGATAGTGTT 58.932 50.000 0.00 0.00 0.00 3.32
622 631 3.007831 TCATTTGGTTTGGGAATTGAGGC 59.992 43.478 0.00 0.00 0.00 4.70
753 763 1.842714 TGGTGTGCCCAGATGAACA 59.157 52.632 0.00 0.00 38.72 3.18
795 805 5.480205 CCATCACTCGATTCATCTGATGAT 58.520 41.667 20.16 10.89 38.36 2.45
961 979 6.218746 GTTCTTCATTGAACTCAGCCATTTT 58.781 36.000 0.00 0.00 42.03 1.82
1030 1050 7.603651 AGATATACACGAGGTATCATTCCAAC 58.396 38.462 7.57 0.00 41.77 3.77
1134 1161 3.244146 GGATCCCTGACTCACTCATCATG 60.244 52.174 0.00 0.00 0.00 3.07
1158 1185 2.290093 GAGCTTGAATCCTATGCTGTGC 59.710 50.000 0.00 0.00 33.83 4.57
1192 1219 5.351465 TCAACAAAAGCCTCTCATTATCGAC 59.649 40.000 0.00 0.00 0.00 4.20
1265 1292 1.079543 GCATCGCCTATCATCGGCT 60.080 57.895 0.00 0.00 45.37 5.52
1385 1412 4.262079 GGGTGAGCAGCTAATCGTTATACT 60.262 45.833 0.00 0.00 0.00 2.12
1547 1574 1.542915 GAAGATGCATGCAAGTGGTGT 59.457 47.619 26.68 5.83 0.00 4.16
1548 1575 0.885879 AGATGCATGCAAGTGGTGTG 59.114 50.000 26.68 0.00 0.00 3.82
1679 1706 5.591472 TGCATGGAGGATCAAGAATAAAGTG 59.409 40.000 0.00 0.00 36.25 3.16
1680 1707 5.009410 GCATGGAGGATCAAGAATAAAGTGG 59.991 44.000 0.00 0.00 36.25 4.00
1681 1708 5.779241 TGGAGGATCAAGAATAAAGTGGT 57.221 39.130 0.00 0.00 36.25 4.16
1683 1710 7.451731 TGGAGGATCAAGAATAAAGTGGTAT 57.548 36.000 0.00 0.00 36.25 2.73
1813 1841 8.049117 TGCTTCCACATTTATGTAAAGAGATCT 58.951 33.333 15.73 0.00 39.39 2.75
1827 1855 7.839705 TGTAAAGAGATCTGAGTAACCATAGGT 59.160 37.037 0.00 0.00 37.65 3.08
1828 1856 9.352191 GTAAAGAGATCTGAGTAACCATAGGTA 57.648 37.037 0.00 0.00 33.12 3.08
1829 1857 8.840200 AAAGAGATCTGAGTAACCATAGGTAA 57.160 34.615 0.00 0.00 33.12 2.85
1830 1858 9.440761 AAAGAGATCTGAGTAACCATAGGTAAT 57.559 33.333 0.00 0.00 33.12 1.89
1831 1859 8.644374 AGAGATCTGAGTAACCATAGGTAATC 57.356 38.462 0.00 0.00 33.12 1.75
1832 1860 7.672239 AGAGATCTGAGTAACCATAGGTAATCC 59.328 40.741 0.00 0.00 33.12 3.01
1833 1861 7.306013 AGATCTGAGTAACCATAGGTAATCCA 58.694 38.462 0.00 0.00 33.12 3.41
1834 1862 6.726490 TCTGAGTAACCATAGGTAATCCAC 57.274 41.667 0.00 0.00 33.12 4.02
1853 1881 2.742053 CACTAATCCAACTTGTCGGGTG 59.258 50.000 0.00 0.00 0.00 4.61
1859 1887 4.196626 TCCAACTTGTCGGGTGTAATAG 57.803 45.455 0.00 0.00 0.00 1.73
1925 2048 4.407945 GGTAAGTAAGTAATGCAGGAGGGA 59.592 45.833 0.00 0.00 0.00 4.20
1927 2050 3.995636 AGTAAGTAATGCAGGAGGGAGA 58.004 45.455 0.00 0.00 0.00 3.71
1931 2054 4.870021 AGTAATGCAGGAGGGAGAAAAT 57.130 40.909 0.00 0.00 0.00 1.82
1937 2060 2.687014 GCAGGAGGGAGAAAATTACCCC 60.687 54.545 0.00 0.00 44.21 4.95
1968 2091 8.466798 GTTAATTTAACAAGGGCTCATGTATGT 58.533 33.333 13.23 0.00 38.52 2.29
1981 2104 8.725148 GGGCTCATGTATGTAGAATTGATAAAG 58.275 37.037 0.00 0.00 0.00 1.85
2020 2144 6.701400 ACTGAAAATTATTGGTGTTGCAGAAC 59.299 34.615 0.00 0.00 0.00 3.01
2033 2157 0.235926 GCAGAACGCAAGGAGAACAC 59.764 55.000 0.00 0.00 46.39 3.32
2051 2272 4.053469 ACACAAATTTTACTGTGCCACC 57.947 40.909 7.71 0.00 45.56 4.61
2179 2406 9.191995 CTTCTGTTAACCAATTTGTTGATAACC 57.808 33.333 2.48 0.00 0.00 2.85
2292 2519 4.025730 CGGTAACATCAACATTCATCTCGG 60.026 45.833 0.00 0.00 0.00 4.63
2342 2569 1.561643 TTCCAAAGCAACCAACACCA 58.438 45.000 0.00 0.00 0.00 4.17
2794 3024 2.607892 GCCTCACTGCGAACACCAC 61.608 63.158 0.00 0.00 0.00 4.16
3094 3324 4.410400 GAAGCAGACCCACCCCGG 62.410 72.222 0.00 0.00 0.00 5.73
3095 3325 4.974438 AAGCAGACCCACCCCGGA 62.974 66.667 0.73 0.00 36.56 5.14
3096 3326 4.974438 AGCAGACCCACCCCGGAA 62.974 66.667 0.73 0.00 36.56 4.30
3097 3327 3.728373 GCAGACCCACCCCGGAAT 61.728 66.667 0.73 0.00 36.56 3.01
3098 3328 2.272146 CAGACCCACCCCGGAATG 59.728 66.667 0.73 0.00 36.56 2.67
3099 3329 3.015145 AGACCCACCCCGGAATGG 61.015 66.667 15.23 15.23 36.56 3.16
3100 3330 3.335729 GACCCACCCCGGAATGGT 61.336 66.667 19.25 12.61 36.56 3.55
3105 3335 4.360405 ACCCCGGAATGGTGGCAC 62.360 66.667 9.70 9.70 33.94 5.01
3111 3341 3.443045 GAATGGTGGCACCCGCAG 61.443 66.667 32.61 0.00 41.24 5.18
3124 3354 3.490759 CGCAGGTGTCACCGCATC 61.491 66.667 27.04 14.20 44.90 3.91
3125 3355 3.490759 GCAGGTGTCACCGCATCG 61.491 66.667 24.64 11.91 44.90 3.84
3126 3356 2.261361 CAGGTGTCACCGCATCGA 59.739 61.111 16.44 0.00 44.90 3.59
3127 3357 1.807165 CAGGTGTCACCGCATCGAG 60.807 63.158 16.44 0.00 44.90 4.04
3128 3358 2.509336 GGTGTCACCGCATCGAGG 60.509 66.667 6.18 0.00 0.00 4.63
3129 3359 3.188786 GTGTCACCGCATCGAGGC 61.189 66.667 12.96 12.96 0.00 4.70
3130 3360 4.451150 TGTCACCGCATCGAGGCC 62.451 66.667 17.46 2.10 0.00 5.19
3147 3377 3.558674 CCGAAGACTGGCAAGGATT 57.441 52.632 0.00 0.00 0.00 3.01
3148 3378 1.826385 CCGAAGACTGGCAAGGATTT 58.174 50.000 0.00 0.00 0.00 2.17
3149 3379 1.740025 CCGAAGACTGGCAAGGATTTC 59.260 52.381 0.00 0.00 0.00 2.17
3150 3380 2.616510 CCGAAGACTGGCAAGGATTTCT 60.617 50.000 0.00 0.00 0.00 2.52
3151 3381 2.675348 CGAAGACTGGCAAGGATTTCTC 59.325 50.000 0.00 0.00 0.00 2.87
3152 3382 2.797177 AGACTGGCAAGGATTTCTCC 57.203 50.000 0.00 0.00 42.43 3.71
3153 3383 1.283321 AGACTGGCAAGGATTTCTCCC 59.717 52.381 0.00 0.00 43.21 4.30
3154 3384 1.004745 GACTGGCAAGGATTTCTCCCA 59.995 52.381 0.00 0.00 43.21 4.37
3155 3385 1.642762 ACTGGCAAGGATTTCTCCCAT 59.357 47.619 0.00 0.00 43.21 4.00
3156 3386 2.852449 ACTGGCAAGGATTTCTCCCATA 59.148 45.455 0.00 0.00 43.21 2.74
3157 3387 3.217626 CTGGCAAGGATTTCTCCCATAC 58.782 50.000 0.00 0.00 43.21 2.39
3158 3388 2.852449 TGGCAAGGATTTCTCCCATACT 59.148 45.455 0.00 0.00 43.21 2.12
3159 3389 3.117888 TGGCAAGGATTTCTCCCATACTC 60.118 47.826 0.00 0.00 43.21 2.59
3160 3390 3.481453 GCAAGGATTTCTCCCATACTCC 58.519 50.000 0.00 0.00 43.21 3.85
3161 3391 3.117888 GCAAGGATTTCTCCCATACTCCA 60.118 47.826 0.00 0.00 43.21 3.86
3162 3392 4.628715 GCAAGGATTTCTCCCATACTCCAA 60.629 45.833 0.00 0.00 43.21 3.53
3163 3393 5.699143 CAAGGATTTCTCCCATACTCCAAT 58.301 41.667 0.00 0.00 43.21 3.16
3164 3394 5.574970 AGGATTTCTCCCATACTCCAATC 57.425 43.478 0.00 0.00 43.21 2.67
3165 3395 4.352298 AGGATTTCTCCCATACTCCAATCC 59.648 45.833 0.00 0.00 43.21 3.01
3166 3396 4.507512 GGATTTCTCCCATACTCCAATCCC 60.508 50.000 0.00 0.00 34.51 3.85
3167 3397 2.118403 TCTCCCATACTCCAATCCCC 57.882 55.000 0.00 0.00 0.00 4.81
3168 3398 1.296832 TCTCCCATACTCCAATCCCCA 59.703 52.381 0.00 0.00 0.00 4.96
3169 3399 1.421646 CTCCCATACTCCAATCCCCAC 59.578 57.143 0.00 0.00 0.00 4.61
3170 3400 0.478507 CCCATACTCCAATCCCCACC 59.521 60.000 0.00 0.00 0.00 4.61
3171 3401 0.108585 CCATACTCCAATCCCCACCG 59.891 60.000 0.00 0.00 0.00 4.94
3172 3402 0.535102 CATACTCCAATCCCCACCGC 60.535 60.000 0.00 0.00 0.00 5.68
3173 3403 1.705997 ATACTCCAATCCCCACCGCC 61.706 60.000 0.00 0.00 0.00 6.13
3174 3404 4.506255 CTCCAATCCCCACCGCCC 62.506 72.222 0.00 0.00 0.00 6.13
3176 3406 4.374584 CCAATCCCCACCGCCCAA 62.375 66.667 0.00 0.00 0.00 4.12
3177 3407 3.068064 CAATCCCCACCGCCCAAC 61.068 66.667 0.00 0.00 0.00 3.77
3178 3408 4.733542 AATCCCCACCGCCCAACG 62.734 66.667 0.00 0.00 43.15 4.10
3200 3430 4.459089 GGAGCCGACCAGCCAGAC 62.459 72.222 0.00 0.00 0.00 3.51
3201 3431 4.459089 GAGCCGACCAGCCAGACC 62.459 72.222 0.00 0.00 0.00 3.85
3224 3454 3.520862 CCACCACCATGCGCCATC 61.521 66.667 4.18 0.00 0.00 3.51
3225 3455 3.879682 CACCACCATGCGCCATCG 61.880 66.667 4.18 0.00 39.07 3.84
3265 3495 2.280797 GCCTCACTGCGAACACCA 60.281 61.111 0.00 0.00 0.00 4.17
3266 3496 2.607892 GCCTCACTGCGAACACCAC 61.608 63.158 0.00 0.00 0.00 4.16
3267 3497 1.961277 CCTCACTGCGAACACCACC 60.961 63.158 0.00 0.00 0.00 4.61
3268 3498 1.227527 CTCACTGCGAACACCACCA 60.228 57.895 0.00 0.00 0.00 4.17
3269 3499 1.498865 CTCACTGCGAACACCACCAC 61.499 60.000 0.00 0.00 0.00 4.16
3270 3500 2.587753 ACTGCGAACACCACCACG 60.588 61.111 0.00 0.00 0.00 4.94
3271 3501 2.279851 CTGCGAACACCACCACGA 60.280 61.111 0.00 0.00 0.00 4.35
3272 3502 2.279851 TGCGAACACCACCACGAG 60.280 61.111 0.00 0.00 0.00 4.18
3273 3503 3.041940 GCGAACACCACCACGAGG 61.042 66.667 0.00 0.00 42.21 4.63
3274 3504 3.041940 CGAACACCACCACGAGGC 61.042 66.667 0.00 0.00 39.06 4.70
3275 3505 2.668550 GAACACCACCACGAGGCC 60.669 66.667 0.00 0.00 39.06 5.19
3276 3506 3.469863 GAACACCACCACGAGGCCA 62.470 63.158 5.01 0.00 39.06 5.36
3277 3507 2.951475 GAACACCACCACGAGGCCAA 62.951 60.000 5.01 0.00 39.06 4.52
3278 3508 2.669569 CACCACCACGAGGCCAAG 60.670 66.667 5.01 0.00 39.06 3.61
3279 3509 2.847234 ACCACCACGAGGCCAAGA 60.847 61.111 5.01 0.00 39.06 3.02
3280 3510 2.046892 CCACCACGAGGCCAAGAG 60.047 66.667 5.01 0.00 39.06 2.85
3281 3511 2.046892 CACCACGAGGCCAAGAGG 60.047 66.667 5.01 9.07 39.06 3.69
3282 3512 2.203788 ACCACGAGGCCAAGAGGA 60.204 61.111 17.99 0.00 39.06 3.71
3283 3513 2.266055 CCACGAGGCCAAGAGGAC 59.734 66.667 5.01 0.00 46.64 3.85
3289 3519 2.683933 GGCCAAGAGGACCGGAGA 60.684 66.667 9.46 0.00 36.69 3.71
3290 3520 2.726351 GGCCAAGAGGACCGGAGAG 61.726 68.421 9.46 0.00 36.69 3.20
3291 3521 1.682684 GCCAAGAGGACCGGAGAGA 60.683 63.158 9.46 0.00 36.89 3.10
3292 3522 1.258445 GCCAAGAGGACCGGAGAGAA 61.258 60.000 9.46 0.00 36.89 2.87
3293 3523 0.820871 CCAAGAGGACCGGAGAGAAG 59.179 60.000 9.46 0.00 36.89 2.85
3294 3524 0.174617 CAAGAGGACCGGAGAGAAGC 59.825 60.000 9.46 0.00 0.00 3.86
3295 3525 1.316706 AAGAGGACCGGAGAGAAGCG 61.317 60.000 9.46 0.00 0.00 4.68
3296 3526 3.418744 GAGGACCGGAGAGAAGCGC 62.419 68.421 9.46 0.00 0.00 5.92
3297 3527 4.516195 GGACCGGAGAGAAGCGCC 62.516 72.222 9.46 0.00 0.00 6.53
3298 3528 4.516195 GACCGGAGAGAAGCGCCC 62.516 72.222 9.46 0.00 31.97 6.13
3318 3548 4.475135 GGGAGGGAGAAGCGGCAC 62.475 72.222 1.45 0.00 0.00 5.01
3319 3549 4.475135 GGAGGGAGAAGCGGCACC 62.475 72.222 1.45 0.00 0.00 5.01
3320 3550 4.821589 GAGGGAGAAGCGGCACCG 62.822 72.222 4.30 4.30 43.09 4.94
3322 3552 4.821589 GGGAGAAGCGGCACCGAG 62.822 72.222 14.43 0.00 42.83 4.63
3323 3553 4.821589 GGAGAAGCGGCACCGAGG 62.822 72.222 14.43 0.00 42.83 4.63
3339 3569 4.772687 GGCCGAACGGGAGGGAAC 62.773 72.222 15.01 0.00 38.47 3.62
3340 3570 4.772687 GCCGAACGGGAGGGAACC 62.773 72.222 15.01 0.00 43.78 3.62
3352 3582 4.717313 GGAACCACCTCCACCGCC 62.717 72.222 0.00 0.00 35.36 6.13
3461 3691 4.090588 CCCGAAACAGGCCCGCTA 62.091 66.667 0.00 0.00 0.00 4.26
3462 3692 2.046700 CCGAAACAGGCCCGCTAA 60.047 61.111 0.00 0.00 0.00 3.09
3463 3693 2.106683 CCGAAACAGGCCCGCTAAG 61.107 63.158 0.00 0.00 0.00 2.18
3464 3694 2.750888 CGAAACAGGCCCGCTAAGC 61.751 63.158 0.00 0.00 0.00 3.09
3520 3750 4.790962 CAGCACCCTGCCGCTCAT 62.791 66.667 0.00 0.00 46.52 2.90
3521 3751 4.479993 AGCACCCTGCCGCTCATC 62.480 66.667 0.00 0.00 46.52 2.92
3527 3757 4.218578 CTGCCGCTCATCGCCTCT 62.219 66.667 0.00 0.00 36.73 3.69
3528 3758 4.212913 TGCCGCTCATCGCCTCTC 62.213 66.667 0.00 0.00 36.73 3.20
3529 3759 4.959596 GCCGCTCATCGCCTCTCC 62.960 72.222 0.00 0.00 36.73 3.71
3530 3760 4.292178 CCGCTCATCGCCTCTCCC 62.292 72.222 0.00 0.00 36.73 4.30
3531 3761 4.292178 CGCTCATCGCCTCTCCCC 62.292 72.222 0.00 0.00 34.21 4.81
3532 3762 3.934962 GCTCATCGCCTCTCCCCC 61.935 72.222 0.00 0.00 0.00 5.40
3533 3763 3.610669 CTCATCGCCTCTCCCCCG 61.611 72.222 0.00 0.00 0.00 5.73
3579 3809 9.504708 AATAGCTGAGAGAATTTCCATCTAATG 57.495 33.333 0.00 0.00 0.00 1.90
3588 3818 6.545298 AGAATTTCCATCTAATGTGAAGGCTC 59.455 38.462 0.00 0.00 0.00 4.70
3601 3831 2.275318 GAAGGCTCATTCTCCAAGACG 58.725 52.381 0.00 0.00 0.00 4.18
3621 3851 2.531206 GAGGACATTCACTACACTCGC 58.469 52.381 0.00 0.00 0.00 5.03
3622 3852 1.893137 AGGACATTCACTACACTCGCA 59.107 47.619 0.00 0.00 0.00 5.10
3697 3949 2.106338 TCAGGAGCATGTTCAGGTTCAA 59.894 45.455 11.93 0.00 0.00 2.69
3708 3960 5.616270 TGTTCAGGTTCAATGTTACTGCTA 58.384 37.500 0.00 0.00 0.00 3.49
3711 3963 6.048732 TCAGGTTCAATGTTACTGCTATCA 57.951 37.500 0.00 0.00 0.00 2.15
3718 3970 9.410556 GTTCAATGTTACTGCTATCAAAATTGT 57.589 29.630 0.00 0.00 0.00 2.71
3723 3975 9.793252 ATGTTACTGCTATCAAAATTGTCAATC 57.207 29.630 0.00 0.00 0.00 2.67
3727 3979 6.096001 ACTGCTATCAAAATTGTCAATCTCCC 59.904 38.462 0.00 0.00 0.00 4.30
3760 4012 4.884164 ACTCACTTTCAGGAAAAAGACTGG 59.116 41.667 3.56 0.00 38.30 4.00
3831 4083 1.853319 GACACAAGGTCAGAACGCG 59.147 57.895 3.53 3.53 46.19 6.01
3832 4084 0.874607 GACACAAGGTCAGAACGCGT 60.875 55.000 5.58 5.58 46.19 6.01
3833 4085 0.874607 ACACAAGGTCAGAACGCGTC 60.875 55.000 14.44 6.38 0.00 5.19
3834 4086 0.874175 CACAAGGTCAGAACGCGTCA 60.874 55.000 14.44 0.00 0.00 4.35
3835 4087 0.179094 ACAAGGTCAGAACGCGTCAA 60.179 50.000 14.44 0.00 0.00 3.18
3836 4088 0.934496 CAAGGTCAGAACGCGTCAAA 59.066 50.000 14.44 0.00 0.00 2.69
3837 4089 1.329292 CAAGGTCAGAACGCGTCAAAA 59.671 47.619 14.44 0.00 0.00 2.44
3838 4090 1.658994 AGGTCAGAACGCGTCAAAAA 58.341 45.000 14.44 0.00 0.00 1.94
3896 4148 1.416401 ACATCCACTCGACCACTTGTT 59.584 47.619 0.00 0.00 0.00 2.83
3934 4187 0.757188 CTCTGAGGGCGGGTGTATCT 60.757 60.000 0.00 0.00 0.00 1.98
3952 4211 3.845781 TCTGCTCATATTTCCACTCCC 57.154 47.619 0.00 0.00 0.00 4.30
4016 4275 9.816354 TGAATCTGAATGTGATTACGATCTTTA 57.184 29.630 0.00 0.00 34.67 1.85
4027 4286 9.209175 GTGATTACGATCTTTATTGCCTTATCT 57.791 33.333 0.00 0.00 33.28 1.98
4038 4297 4.778213 TTGCCTTATCTGTGAATAGCCT 57.222 40.909 0.00 0.00 0.00 4.58
4112 4371 1.747355 CATTGCTCTCGCCATCCTTTT 59.253 47.619 0.00 0.00 34.43 2.27
4179 4438 2.163818 TGTACCAGGAACTTCTTGCG 57.836 50.000 0.00 0.00 34.60 4.85
4181 4440 2.288825 TGTACCAGGAACTTCTTGCGAG 60.289 50.000 0.00 0.00 34.60 5.03
4192 4451 0.538584 TCTTGCGAGCCATCAGTGAT 59.461 50.000 0.00 0.00 0.00 3.06
4375 4634 0.485099 AGACCTCTCCCACACACTCT 59.515 55.000 0.00 0.00 0.00 3.24
4376 4635 0.892063 GACCTCTCCCACACACTCTC 59.108 60.000 0.00 0.00 0.00 3.20
4447 4708 0.252881 TGGGAGAGGCCATGAAGAGT 60.253 55.000 5.01 0.00 38.95 3.24
4642 4903 2.598394 GCCAGGCAAGACAAGGCA 60.598 61.111 6.55 0.00 44.59 4.75
4747 5008 7.863877 TGTTTCTTCACAATCATGTCATGAAAG 59.136 33.333 19.17 16.30 43.50 2.62
4750 5011 8.797350 TCTTCACAATCATGTCATGAAAGTAT 57.203 30.769 19.17 0.00 43.50 2.12
4789 5050 5.747197 TGAAACGAAGTACAGTTCTGAGTTC 59.253 40.000 6.83 7.85 45.00 3.01
4790 5051 5.517322 AACGAAGTACAGTTCTGAGTTCT 57.483 39.130 6.83 0.00 45.00 3.01
4791 5052 6.630444 AACGAAGTACAGTTCTGAGTTCTA 57.370 37.500 6.83 0.00 45.00 2.10
4792 5053 6.243811 ACGAAGTACAGTTCTGAGTTCTAG 57.756 41.667 6.83 0.00 41.94 2.43
4793 5054 5.090083 CGAAGTACAGTTCTGAGTTCTAGC 58.910 45.833 6.83 0.00 0.00 3.42
4794 5055 5.334957 CGAAGTACAGTTCTGAGTTCTAGCA 60.335 44.000 6.83 0.00 0.00 3.49
4795 5056 6.406692 AAGTACAGTTCTGAGTTCTAGCAA 57.593 37.500 6.83 0.00 0.00 3.91
4796 5057 6.597832 AGTACAGTTCTGAGTTCTAGCAAT 57.402 37.500 6.83 0.00 0.00 3.56
4797 5058 7.704578 AGTACAGTTCTGAGTTCTAGCAATA 57.295 36.000 6.83 0.00 0.00 1.90
4798 5059 7.540299 AGTACAGTTCTGAGTTCTAGCAATAC 58.460 38.462 6.83 0.00 0.00 1.89
4799 5060 6.346477 ACAGTTCTGAGTTCTAGCAATACA 57.654 37.500 6.83 0.00 0.00 2.29
4800 5061 6.759272 ACAGTTCTGAGTTCTAGCAATACAA 58.241 36.000 6.83 0.00 0.00 2.41
4801 5062 6.647067 ACAGTTCTGAGTTCTAGCAATACAAC 59.353 38.462 6.83 0.00 0.00 3.32
4802 5063 6.091441 CAGTTCTGAGTTCTAGCAATACAACC 59.909 42.308 0.00 0.00 0.00 3.77
4803 5064 6.014156 AGTTCTGAGTTCTAGCAATACAACCT 60.014 38.462 0.00 0.00 0.00 3.50
4804 5065 5.967088 TCTGAGTTCTAGCAATACAACCTC 58.033 41.667 0.00 0.00 0.00 3.85
4805 5066 4.744570 TGAGTTCTAGCAATACAACCTCG 58.255 43.478 0.00 0.00 0.00 4.63
4806 5067 4.461431 TGAGTTCTAGCAATACAACCTCGA 59.539 41.667 0.00 0.00 0.00 4.04
4807 5068 5.127194 TGAGTTCTAGCAATACAACCTCGAT 59.873 40.000 0.00 0.00 0.00 3.59
4808 5069 6.320418 TGAGTTCTAGCAATACAACCTCGATA 59.680 38.462 0.00 0.00 0.00 2.92
4809 5070 7.014326 TGAGTTCTAGCAATACAACCTCGATAT 59.986 37.037 0.00 0.00 0.00 1.63
4810 5071 8.405418 AGTTCTAGCAATACAACCTCGATATA 57.595 34.615 0.00 0.00 0.00 0.86
4811 5072 8.857098 AGTTCTAGCAATACAACCTCGATATAA 58.143 33.333 0.00 0.00 0.00 0.98
4812 5073 8.913656 GTTCTAGCAATACAACCTCGATATAAC 58.086 37.037 0.00 0.00 0.00 1.89
4813 5074 8.405418 TCTAGCAATACAACCTCGATATAACT 57.595 34.615 0.00 0.00 0.00 2.24
4814 5075 8.857098 TCTAGCAATACAACCTCGATATAACTT 58.143 33.333 0.00 0.00 0.00 2.66
4815 5076 9.477484 CTAGCAATACAACCTCGATATAACTTT 57.523 33.333 0.00 0.00 0.00 2.66
4817 5078 9.998106 AGCAATACAACCTCGATATAACTTTAT 57.002 29.630 0.00 0.00 0.00 1.40
4958 5251 7.120579 ACGGAACATAGAGAATTTGCATGTAAA 59.879 33.333 11.51 11.51 0.00 2.01
5039 5332 6.790232 TGAGAAACAAAACAATTCCCTTCT 57.210 33.333 0.00 0.00 0.00 2.85
5055 5348 6.699575 TCCCTTCTCAAAGAAAAGAAACAG 57.300 37.500 0.00 0.00 33.19 3.16
5070 5363 9.818796 GAAAAGAAACAGAACAAGCTAGAATAG 57.181 33.333 0.00 0.00 43.09 1.73
5085 5378 8.663209 AGCTAGAATAGATGGAGTGATATTGT 57.337 34.615 0.00 0.00 42.77 2.71
5109 5402 6.338146 TGGTAACATACTAGCATGTCTCAAC 58.662 40.000 9.06 5.87 46.17 3.18
5110 5403 5.753921 GGTAACATACTAGCATGTCTCAACC 59.246 44.000 9.06 10.41 38.19 3.77
5118 5413 3.878778 AGCATGTCTCAACCTTATGTCC 58.121 45.455 0.00 0.00 0.00 4.02
5129 5424 0.870307 CTTATGTCCTCGTTCGCCGG 60.870 60.000 0.00 0.00 37.11 6.13
5135 5430 0.947180 TCCTCGTTCGCCGGAAAAAG 60.947 55.000 5.05 0.00 37.11 2.27
5138 5434 0.249573 TCGTTCGCCGGAAAAAGAGT 60.250 50.000 5.05 0.00 37.11 3.24
5140 5436 1.398071 CGTTCGCCGGAAAAAGAGTTC 60.398 52.381 5.05 0.00 33.05 3.01
5161 5458 5.929697 TCATGTCTTGTTGTCATGAACTC 57.070 39.130 0.00 0.00 44.09 3.01
5186 5483 2.618053 CGAAGAGGCGGTTAATCTTGT 58.382 47.619 0.00 0.00 33.53 3.16
5197 5494 4.023193 CGGTTAATCTTGTTGGCTTGTCTT 60.023 41.667 0.00 0.00 0.00 3.01
5202 5499 3.620488 TCTTGTTGGCTTGTCTTTCACT 58.380 40.909 0.00 0.00 0.00 3.41
5242 5539 6.035005 CGCTAACAATTTTCAGAGAAGATCGA 59.965 38.462 0.00 0.00 0.00 3.59
5293 5590 1.072331 ACATTCCGCAAGAACCTGTCT 59.928 47.619 0.00 0.00 37.29 3.41
5305 5602 1.742880 CCTGTCTGCCACATCCACG 60.743 63.158 0.00 0.00 33.23 4.94
5322 5619 0.107456 ACGAGGCCTGCATATTCTGG 59.893 55.000 12.00 0.00 0.00 3.86
5344 5641 0.550914 ACCTGAGCAAAGTGGAACCA 59.449 50.000 0.00 0.00 37.80 3.67
5404 5701 2.972713 AGTTTCAGTACAAGAGAGGCCA 59.027 45.455 5.01 0.00 0.00 5.36
5464 5761 4.292186 TGGGAGAAAGATTGACCTGAAG 57.708 45.455 0.00 0.00 0.00 3.02
5472 5769 0.478072 ATTGACCTGAAGGCACACCA 59.522 50.000 0.00 0.00 39.06 4.17
5531 5828 2.265367 TCCATGGCTTCTTGTCAGGTA 58.735 47.619 6.96 0.00 31.78 3.08
5558 5861 1.260538 TTGGTTTGCACTGCACCCAA 61.261 50.000 22.21 22.21 43.12 4.12
5597 5901 4.392047 TCTTGCTCATGTTCACTGACATT 58.608 39.130 0.00 0.00 38.15 2.71
5774 6078 1.777941 GTGGGAGTAAGTCGAGGGAT 58.222 55.000 0.00 0.00 0.00 3.85
5824 6128 6.403866 TTTTATGCAAGTTGAAGTGGTCAT 57.596 33.333 7.16 1.22 35.70 3.06
5927 6231 3.463944 ACAAGAAGTAGAACAACGGTGG 58.536 45.455 4.97 0.00 0.00 4.61
5937 6241 0.253610 ACAACGGTGGGTGTTCTTGA 59.746 50.000 4.97 0.00 0.00 3.02
5938 6242 1.133915 ACAACGGTGGGTGTTCTTGAT 60.134 47.619 4.97 0.00 0.00 2.57
5939 6243 1.266718 CAACGGTGGGTGTTCTTGATG 59.733 52.381 0.00 0.00 0.00 3.07
5940 6244 0.889186 ACGGTGGGTGTTCTTGATGC 60.889 55.000 0.00 0.00 0.00 3.91
5941 6245 0.606401 CGGTGGGTGTTCTTGATGCT 60.606 55.000 0.00 0.00 0.00 3.79
5942 6246 0.883833 GGTGGGTGTTCTTGATGCTG 59.116 55.000 0.00 0.00 0.00 4.41
5943 6247 0.883833 GTGGGTGTTCTTGATGCTGG 59.116 55.000 0.00 0.00 0.00 4.85
5944 6248 0.895100 TGGGTGTTCTTGATGCTGGC 60.895 55.000 0.00 0.00 0.00 4.85
5945 6249 0.895100 GGGTGTTCTTGATGCTGGCA 60.895 55.000 0.00 0.00 0.00 4.92
5946 6250 0.242017 GGTGTTCTTGATGCTGGCAC 59.758 55.000 0.00 0.00 0.00 5.01
5947 6251 1.242076 GTGTTCTTGATGCTGGCACT 58.758 50.000 0.00 0.00 0.00 4.40
5948 6252 1.068748 GTGTTCTTGATGCTGGCACTG 60.069 52.381 0.00 0.00 0.00 3.66
5964 6268 4.649845 TGCATAGCAGCTGCACAT 57.350 50.000 38.24 27.22 44.30 3.21
5973 6277 0.587768 CAGCTGCACATCGTTTGTCA 59.412 50.000 0.00 0.00 36.00 3.58
6074 6380 3.115190 GCAGTTCCTGTGCAACTAGCG 62.115 57.143 0.00 0.00 40.86 4.26
6095 6404 2.622942 GGACTGCAAATGACAACAGGAA 59.377 45.455 0.00 0.00 34.40 3.36
6099 6408 5.673514 ACTGCAAATGACAACAGGAAATTT 58.326 33.333 0.00 0.00 34.40 1.82
6106 6415 5.643379 TGACAACAGGAAATTTCATAGCC 57.357 39.130 19.49 2.69 0.00 3.93
6158 6467 2.334023 GCAGATATGGTCTTCCCCTCT 58.666 52.381 0.00 0.00 34.00 3.69
6174 6483 2.158986 CCCTCTAATGAGCTCACCTGTG 60.159 54.545 20.97 11.85 38.93 3.66
6273 6588 8.240682 AGCTAATGTTCATGTAAAATAACGCAA 58.759 29.630 0.00 0.00 0.00 4.85
6322 6637 3.514706 TGGTGAAATAGGTAGTACGGCAA 59.485 43.478 0.00 0.00 0.00 4.52
6358 6676 2.167487 GCTGAATCTTCTCCTCGGAAGT 59.833 50.000 0.00 0.00 42.19 3.01
6397 6715 4.011698 TGCAGCTTTTATGCTCTCATCAA 58.988 39.130 0.00 0.00 44.17 2.57
6421 6739 9.810545 CAAAGTTTGTTTGAGGAATTTAACCTA 57.189 29.630 7.48 0.00 37.93 3.08
6450 6771 6.071728 GGGAACATGAATCTTGTCACAGAAAT 60.072 38.462 0.00 0.00 0.00 2.17
6459 6786 1.268999 TGTCACAGAAATGCGCAAACC 60.269 47.619 17.11 6.13 0.00 3.27
6471 6798 1.732405 GCGCAAACCAGTTTATGCCTC 60.732 52.381 0.30 0.00 0.00 4.70
6485 6824 3.959495 ATGCCTCTTGTGGTGGATTAT 57.041 42.857 0.00 0.00 0.00 1.28
6525 6864 1.258445 ACCGAGAAATCGCCAGGAGT 61.258 55.000 0.00 0.00 0.00 3.85
6526 6865 0.807667 CCGAGAAATCGCCAGGAGTG 60.808 60.000 0.00 0.00 0.00 3.51
6533 6872 3.774528 CGCCAGGAGTGCTGCCTA 61.775 66.667 6.05 0.00 33.51 3.93
6534 6873 2.124942 GCCAGGAGTGCTGCCTAC 60.125 66.667 6.05 0.00 33.51 3.18
6536 6875 1.220206 CCAGGAGTGCTGCCTACTG 59.780 63.158 18.14 18.14 42.19 2.74
6565 6904 9.627123 TTAAGGAGAAGAATATTACATGTTGGG 57.373 33.333 2.30 0.00 0.00 4.12
6596 6935 0.779997 AGGGGACATTGCCAGAAACT 59.220 50.000 0.00 0.00 0.00 2.66
6600 6939 3.153919 GGGACATTGCCAGAAACTGTTA 58.846 45.455 0.00 0.00 0.00 2.41
6612 6951 2.675658 AACTGTTAGCAACCCACCAT 57.324 45.000 0.00 0.00 0.00 3.55
6639 6978 6.677781 TTCACTTCTCAAGAACACGAATTT 57.322 33.333 0.00 0.00 0.00 1.82
6667 7006 3.274288 CAGGCCTTGATACAAGAGGAAC 58.726 50.000 0.00 0.00 32.11 3.62
6669 7008 4.162320 CAGGCCTTGATACAAGAGGAACTA 59.838 45.833 0.00 0.00 41.55 2.24
6670 7009 4.407296 AGGCCTTGATACAAGAGGAACTAG 59.593 45.833 0.00 0.00 41.55 2.57
6671 7010 4.406003 GGCCTTGATACAAGAGGAACTAGA 59.594 45.833 12.25 0.00 41.55 2.43
6672 7011 5.104900 GGCCTTGATACAAGAGGAACTAGAA 60.105 44.000 12.25 0.00 41.55 2.10
6673 7012 5.813157 GCCTTGATACAAGAGGAACTAGAAC 59.187 44.000 12.25 0.00 41.55 3.01
6674 7013 6.574465 GCCTTGATACAAGAGGAACTAGAACA 60.574 42.308 12.25 0.00 41.55 3.18
6675 7014 7.560368 CCTTGATACAAGAGGAACTAGAACAT 58.440 38.462 12.25 0.00 41.55 2.71
6676 7015 8.696374 CCTTGATACAAGAGGAACTAGAACATA 58.304 37.037 12.25 0.00 41.55 2.29
6681 7020 7.674471 ACAAGAGGAACTAGAACATAAAAGC 57.326 36.000 0.00 0.00 41.55 3.51
6682 7021 6.369065 ACAAGAGGAACTAGAACATAAAAGCG 59.631 38.462 0.00 0.00 41.55 4.68
6683 7022 6.038997 AGAGGAACTAGAACATAAAAGCGT 57.961 37.500 0.00 0.00 41.55 5.07
6684 7023 5.869888 AGAGGAACTAGAACATAAAAGCGTG 59.130 40.000 0.00 0.00 41.55 5.34
6685 7024 4.392138 AGGAACTAGAACATAAAAGCGTGC 59.608 41.667 0.00 0.00 36.02 5.34
6686 7025 3.991605 ACTAGAACATAAAAGCGTGCG 57.008 42.857 0.00 0.00 0.00 5.34
6687 7026 3.323243 ACTAGAACATAAAAGCGTGCGT 58.677 40.909 0.00 0.00 0.00 5.24
6688 7027 3.744426 ACTAGAACATAAAAGCGTGCGTT 59.256 39.130 0.00 0.00 0.00 4.84
6689 7028 2.916111 AGAACATAAAAGCGTGCGTTG 58.084 42.857 0.00 0.00 0.00 4.10
6690 7029 1.382088 GAACATAAAAGCGTGCGTTGC 59.618 47.619 0.00 0.00 0.00 4.17
6691 7030 0.386731 ACATAAAAGCGTGCGTTGCC 60.387 50.000 0.00 0.00 0.00 4.52
6692 7031 1.154301 ATAAAAGCGTGCGTTGCCG 60.154 52.632 0.00 0.00 37.07 5.69
6703 7042 3.542742 GTTGCCGCGCTCGTCTAC 61.543 66.667 5.56 0.00 0.00 2.59
6707 7046 3.238241 CCGCGCTCGTCTACGTTG 61.238 66.667 5.56 0.00 40.80 4.10
6708 7047 2.202260 CGCGCTCGTCTACGTTGA 60.202 61.111 5.56 0.00 40.80 3.18
6709 7048 1.794785 CGCGCTCGTCTACGTTGAA 60.795 57.895 5.56 0.00 40.80 2.69
6710 7049 1.721257 CGCGCTCGTCTACGTTGAAG 61.721 60.000 5.56 3.77 40.80 3.02
6711 7050 0.453950 GCGCTCGTCTACGTTGAAGA 60.454 55.000 13.87 13.87 40.80 2.87
6712 7051 1.959747 CGCTCGTCTACGTTGAAGAA 58.040 50.000 15.14 2.22 40.80 2.52
6713 7052 2.313234 CGCTCGTCTACGTTGAAGAAA 58.687 47.619 15.14 0.00 40.80 2.52
6714 7053 2.338813 CGCTCGTCTACGTTGAAGAAAG 59.661 50.000 15.14 9.16 40.80 2.62
6715 7054 3.306818 GCTCGTCTACGTTGAAGAAAGT 58.693 45.455 15.14 0.00 40.80 2.66
6716 7055 4.470462 GCTCGTCTACGTTGAAGAAAGTA 58.530 43.478 15.14 0.00 40.80 2.24
6717 7056 5.094134 GCTCGTCTACGTTGAAGAAAGTAT 58.906 41.667 15.14 0.00 40.80 2.12
6718 7057 5.003590 GCTCGTCTACGTTGAAGAAAGTATG 59.996 44.000 15.14 5.48 40.80 2.39
6719 7058 5.396484 TCGTCTACGTTGAAGAAAGTATGG 58.604 41.667 12.47 0.00 40.80 2.74
6720 7059 5.048504 TCGTCTACGTTGAAGAAAGTATGGT 60.049 40.000 12.47 0.00 40.80 3.55
6721 7060 6.149308 TCGTCTACGTTGAAGAAAGTATGGTA 59.851 38.462 12.47 0.00 40.80 3.25
6722 7061 6.971184 CGTCTACGTTGAAGAAAGTATGGTAT 59.029 38.462 7.09 0.00 34.11 2.73
6723 7062 8.124823 CGTCTACGTTGAAGAAAGTATGGTATA 58.875 37.037 7.09 0.00 34.11 1.47
6724 7063 9.793252 GTCTACGTTGAAGAAAGTATGGTATAA 57.207 33.333 0.07 0.00 0.00 0.98
6728 7067 9.886132 ACGTTGAAGAAAGTATGGTATAAATCT 57.114 29.630 0.00 0.00 0.00 2.40
6770 7109 8.773033 AACCTAGAATTTGGATCAAATATGCT 57.227 30.769 6.34 7.19 42.32 3.79
6771 7110 8.401490 ACCTAGAATTTGGATCAAATATGCTC 57.599 34.615 6.34 1.76 42.32 4.26
6772 7111 8.223330 ACCTAGAATTTGGATCAAATATGCTCT 58.777 33.333 6.34 7.93 42.32 4.09
6773 7112 9.730705 CCTAGAATTTGGATCAAATATGCTCTA 57.269 33.333 6.34 8.50 42.32 2.43
6776 7115 9.240734 AGAATTTGGATCAAATATGCTCTATCC 57.759 33.333 6.34 0.00 42.32 2.59
6777 7116 8.945195 AATTTGGATCAAATATGCTCTATCCA 57.055 30.769 6.34 0.00 42.32 3.41
6778 7117 9.543231 AATTTGGATCAAATATGCTCTATCCAT 57.457 29.630 6.34 0.00 42.32 3.41
6788 7127 9.486497 AAATATGCTCTATCCATATATTCAGCG 57.514 33.333 0.00 0.00 35.44 5.18
6789 7128 5.921962 TGCTCTATCCATATATTCAGCGT 57.078 39.130 0.00 0.00 0.00 5.07
6790 7129 6.286240 TGCTCTATCCATATATTCAGCGTT 57.714 37.500 0.00 0.00 0.00 4.84
6791 7130 6.333416 TGCTCTATCCATATATTCAGCGTTC 58.667 40.000 0.00 0.00 0.00 3.95
6792 7131 6.071391 TGCTCTATCCATATATTCAGCGTTCA 60.071 38.462 0.00 0.00 0.00 3.18
6793 7132 6.983307 GCTCTATCCATATATTCAGCGTTCAT 59.017 38.462 0.00 0.00 0.00 2.57
6794 7133 7.042858 GCTCTATCCATATATTCAGCGTTCATG 60.043 40.741 0.00 0.00 0.00 3.07
6795 7134 5.808042 ATCCATATATTCAGCGTTCATGC 57.192 39.130 0.00 0.00 0.00 4.06
6796 7135 4.640364 TCCATATATTCAGCGTTCATGCA 58.360 39.130 0.00 0.00 37.31 3.96
6797 7136 5.062528 TCCATATATTCAGCGTTCATGCAA 58.937 37.500 0.00 0.00 37.31 4.08
6798 7137 5.706833 TCCATATATTCAGCGTTCATGCAAT 59.293 36.000 0.00 0.00 37.31 3.56
6799 7138 6.878389 TCCATATATTCAGCGTTCATGCAATA 59.122 34.615 0.00 0.00 37.31 1.90
6800 7139 7.390162 TCCATATATTCAGCGTTCATGCAATAA 59.610 33.333 0.00 0.00 37.31 1.40
6801 7140 7.695201 CCATATATTCAGCGTTCATGCAATAAG 59.305 37.037 0.00 0.00 37.31 1.73
6802 7141 6.866010 ATATTCAGCGTTCATGCAATAAGA 57.134 33.333 0.00 0.00 37.31 2.10
6803 7142 4.604843 TTCAGCGTTCATGCAATAAGAG 57.395 40.909 0.00 0.00 37.31 2.85
6804 7143 3.599343 TCAGCGTTCATGCAATAAGAGT 58.401 40.909 0.00 0.00 37.31 3.24
6805 7144 4.754322 TCAGCGTTCATGCAATAAGAGTA 58.246 39.130 0.00 0.00 37.31 2.59
6806 7145 5.175127 TCAGCGTTCATGCAATAAGAGTAA 58.825 37.500 0.00 0.00 37.31 2.24
6807 7146 5.817296 TCAGCGTTCATGCAATAAGAGTAAT 59.183 36.000 0.00 0.00 37.31 1.89
6808 7147 6.983890 TCAGCGTTCATGCAATAAGAGTAATA 59.016 34.615 0.00 0.00 37.31 0.98
6809 7148 7.169813 TCAGCGTTCATGCAATAAGAGTAATAG 59.830 37.037 0.00 0.00 37.31 1.73
6810 7149 6.986817 AGCGTTCATGCAATAAGAGTAATAGT 59.013 34.615 0.00 0.00 37.31 2.12
6811 7150 8.141909 AGCGTTCATGCAATAAGAGTAATAGTA 58.858 33.333 0.00 0.00 37.31 1.82
6812 7151 8.761497 GCGTTCATGCAATAAGAGTAATAGTAA 58.239 33.333 0.00 0.00 34.15 2.24
6838 7177 6.920569 AGTCTAAACTGAAACACGAAATGT 57.079 33.333 0.00 0.00 37.49 2.71
6839 7178 7.316544 AGTCTAAACTGAAACACGAAATGTT 57.683 32.000 0.00 0.00 43.43 2.71
6865 7204 7.524717 TTTTGGATTAAAGAGAAAGACAGGG 57.475 36.000 0.00 0.00 0.00 4.45
6866 7205 6.448369 TTGGATTAAAGAGAAAGACAGGGA 57.552 37.500 0.00 0.00 0.00 4.20
6867 7206 6.054860 TGGATTAAAGAGAAAGACAGGGAG 57.945 41.667 0.00 0.00 0.00 4.30
6868 7207 5.785423 TGGATTAAAGAGAAAGACAGGGAGA 59.215 40.000 0.00 0.00 0.00 3.71
6869 7208 6.070538 TGGATTAAAGAGAAAGACAGGGAGAG 60.071 42.308 0.00 0.00 0.00 3.20
6870 7209 5.746990 TTAAAGAGAAAGACAGGGAGAGG 57.253 43.478 0.00 0.00 0.00 3.69
6871 7210 2.246091 AGAGAAAGACAGGGAGAGGG 57.754 55.000 0.00 0.00 0.00 4.30
6872 7211 1.199615 GAGAAAGACAGGGAGAGGGG 58.800 60.000 0.00 0.00 0.00 4.79
6873 7212 0.494095 AGAAAGACAGGGAGAGGGGT 59.506 55.000 0.00 0.00 0.00 4.95
6874 7213 0.615850 GAAAGACAGGGAGAGGGGTG 59.384 60.000 0.00 0.00 0.00 4.61
6875 7214 0.193574 AAAGACAGGGAGAGGGGTGA 59.806 55.000 0.00 0.00 0.00 4.02
6876 7215 0.545548 AAGACAGGGAGAGGGGTGAC 60.546 60.000 0.00 0.00 0.00 3.67
6891 7230 4.089105 GACCAATGGGGCGTGAAA 57.911 55.556 3.55 0.00 42.05 2.69
6892 7231 2.346597 GACCAATGGGGCGTGAAAA 58.653 52.632 3.55 0.00 42.05 2.29
6893 7232 0.676736 GACCAATGGGGCGTGAAAAA 59.323 50.000 3.55 0.00 42.05 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 5.590530 TCCACAACAGCAATAACAACTTT 57.409 34.783 0.00 0.00 0.00 2.66
30 31 1.300963 GGGCTCAGCAGATCCACAA 59.699 57.895 0.00 0.00 31.52 3.33
75 80 1.851304 TTTCCACATTCTCATGGGCC 58.149 50.000 0.00 0.00 36.56 5.80
99 105 2.158871 TGCGTCAGGTAAAGGAAACTGT 60.159 45.455 0.00 0.00 42.68 3.55
135 143 0.602905 CGGGGTGTCTTGTCTTGGAC 60.603 60.000 0.00 0.00 0.00 4.02
166 174 0.390340 GCGGTGTTGCTCTCATCAGA 60.390 55.000 0.00 0.00 0.00 3.27
193 201 1.662044 GCAGCAAGGGTTGACTTGG 59.338 57.895 7.90 0.00 46.10 3.61
356 364 5.104277 TGGATTGACCCCGTGAAATATAACT 60.104 40.000 0.00 0.00 38.00 2.24
388 396 2.695666 AGACAGTAGTGCGGCTATTGAT 59.304 45.455 14.42 3.77 39.05 2.57
389 397 2.100197 AGACAGTAGTGCGGCTATTGA 58.900 47.619 14.42 0.00 39.05 2.57
390 398 2.586258 AGACAGTAGTGCGGCTATTG 57.414 50.000 0.00 8.40 41.47 1.90
391 399 2.761208 AGAAGACAGTAGTGCGGCTATT 59.239 45.455 0.00 0.00 31.50 1.73
501 509 1.134670 GCTTGTCAGCCACTAGGTAGG 60.135 57.143 0.00 0.00 40.61 3.18
576 585 3.064207 GTCCAAACACTATCACTCGCAA 58.936 45.455 0.00 0.00 0.00 4.85
586 595 6.723298 AACCAAATGATTGTCCAAACACTA 57.277 33.333 0.00 0.00 34.35 2.74
592 601 3.969976 TCCCAAACCAAATGATTGTCCAA 59.030 39.130 0.00 0.00 34.60 3.53
622 631 2.549754 CTGCTTAACAAGACACCTGTGG 59.450 50.000 1.91 0.00 34.19 4.17
753 763 0.966179 GGAACCGGAAAGGCAAATGT 59.034 50.000 9.46 0.00 46.52 2.71
795 805 6.323739 ACTTGTTGGGAGAAATTAAAGCAGAA 59.676 34.615 0.00 0.00 0.00 3.02
843 853 8.792830 AATGAACGAATAAAGAAGATGGAGAA 57.207 30.769 0.00 0.00 0.00 2.87
1030 1050 5.069781 TGAAAACTAAATGGAAAGTGGTGGG 59.930 40.000 0.00 0.00 0.00 4.61
1134 1161 4.213694 CACAGCATAGGATTCAAGCTCATC 59.786 45.833 0.00 0.00 32.35 2.92
1158 1185 7.604164 TGAGAGGCTTTTGTTGACTTATCTTAG 59.396 37.037 0.00 0.00 0.00 2.18
1192 1219 1.795768 TTTGCAGAGCGTAAGTGGAG 58.204 50.000 0.00 0.00 41.68 3.86
1501 1528 5.941555 AGTAGGACATCTCTTAACAAGGG 57.058 43.478 0.00 0.00 0.00 3.95
1518 1545 5.587844 ACTTGCATGCATCTTCTTTAGTAGG 59.412 40.000 23.37 0.00 0.00 3.18
1558 1585 5.067805 ACTGGAAAGACACTTAGCTTTTTGG 59.932 40.000 0.00 0.00 34.69 3.28
1559 1586 6.136541 ACTGGAAAGACACTTAGCTTTTTG 57.863 37.500 0.00 0.00 34.69 2.44
1625 1652 4.458989 GCTCCTCACATTCCATGTTAACAA 59.541 41.667 13.23 0.00 42.70 2.83
1632 1659 2.286872 GACAGCTCCTCACATTCCATG 58.713 52.381 0.00 0.00 0.00 3.66
1710 1737 6.069331 TCCTAAGAGCCTATCGAATTGTACT 58.931 40.000 0.00 0.00 0.00 2.73
1725 1752 1.752683 TCTCACCGACTCCTAAGAGC 58.247 55.000 0.00 0.00 44.65 4.09
1786 1814 7.615582 TCTCTTTACATAAATGTGGAAGCAG 57.384 36.000 5.85 8.82 41.89 4.24
1813 1841 8.792830 ATTAGTGGATTACCTATGGTTACTCA 57.207 34.615 0.00 0.00 37.09 3.41
1821 1849 7.993183 ACAAGTTGGATTAGTGGATTACCTATG 59.007 37.037 7.96 0.00 37.04 2.23
1827 1855 5.424757 CCGACAAGTTGGATTAGTGGATTA 58.575 41.667 7.96 0.00 36.15 1.75
1828 1856 4.261801 CCGACAAGTTGGATTAGTGGATT 58.738 43.478 7.96 0.00 36.15 3.01
1829 1857 3.370527 CCCGACAAGTTGGATTAGTGGAT 60.371 47.826 7.96 0.00 36.15 3.41
1830 1858 2.027561 CCCGACAAGTTGGATTAGTGGA 60.028 50.000 7.96 0.00 36.15 4.02
1831 1859 2.290071 ACCCGACAAGTTGGATTAGTGG 60.290 50.000 7.96 0.65 36.15 4.00
1832 1860 2.742053 CACCCGACAAGTTGGATTAGTG 59.258 50.000 7.96 4.60 36.15 2.74
1833 1861 2.370849 ACACCCGACAAGTTGGATTAGT 59.629 45.455 7.96 0.00 36.15 2.24
1834 1862 3.053831 ACACCCGACAAGTTGGATTAG 57.946 47.619 7.96 0.00 36.15 1.73
1894 1922 9.561069 CCTGCATTACTTACTTACCAAAGATAT 57.439 33.333 0.00 0.00 36.50 1.63
1925 2048 9.831682 TTAAATTAACTGAGGGGGTAATTTTCT 57.168 29.630 13.11 0.00 31.92 2.52
1927 2050 9.382307 TGTTAAATTAACTGAGGGGGTAATTTT 57.618 29.630 15.80 2.29 39.38 1.82
1931 2054 6.949463 CCTTGTTAAATTAACTGAGGGGGTAA 59.051 38.462 20.82 5.62 38.19 2.85
1937 2060 5.710099 TGAGCCCTTGTTAAATTAACTGAGG 59.290 40.000 21.26 21.26 39.85 3.86
1939 2062 6.719370 ACATGAGCCCTTGTTAAATTAACTGA 59.281 34.615 15.80 5.24 39.38 3.41
1968 2091 7.716799 ACCAAATGCACCTTTATCAATTCTA 57.283 32.000 0.00 0.00 0.00 2.10
1981 2104 6.859420 AATTTTCAGTAAACCAAATGCACC 57.141 33.333 0.00 0.00 0.00 5.01
2020 2144 5.399301 CAGTAAAATTTGTGTTCTCCTTGCG 59.601 40.000 0.00 0.00 0.00 4.85
2028 2152 4.506288 GGTGGCACAGTAAAATTTGTGTTC 59.494 41.667 20.82 1.22 44.95 3.18
2033 2157 4.052159 TGTGGTGGCACAGTAAAATTTG 57.948 40.909 20.82 0.00 41.80 2.32
2051 2272 3.381272 ACCATCAGGAAGTGTTTGTTGTG 59.619 43.478 0.00 0.00 38.69 3.33
2119 2340 4.330944 TGAGTAGAGACTTCCGCAAAAA 57.669 40.909 0.00 0.00 35.45 1.94
2179 2406 8.977505 GCTATTTTCAGAAGCTAAGATAGAGTG 58.022 37.037 8.12 0.00 33.40 3.51
2342 2569 1.451936 GCCCCAGCGATCCTGTATT 59.548 57.895 9.47 0.00 40.06 1.89
2496 2726 2.988570 TGGAGGTGTTGTTTTGTACGT 58.011 42.857 0.00 0.00 0.00 3.57
2538 2768 4.790962 ATGTCCGGGCAGCAGCAG 62.791 66.667 16.89 0.00 44.61 4.24
2794 3024 2.266055 GTCCTCTTGGCCTCGTGG 59.734 66.667 3.32 5.44 0.00 4.94
3094 3324 3.443045 CTGCGGGTGCCACCATTC 61.443 66.667 17.22 4.27 41.02 2.67
3107 3337 3.490759 GATGCGGTGACACCTGCG 61.491 66.667 25.66 14.81 39.47 5.18
3108 3338 3.490759 CGATGCGGTGACACCTGC 61.491 66.667 25.14 25.14 37.95 4.85
3109 3339 1.807165 CTCGATGCGGTGACACCTG 60.807 63.158 22.14 15.93 35.66 4.00
3110 3340 2.573869 CTCGATGCGGTGACACCT 59.426 61.111 22.14 3.63 35.66 4.00
3111 3341 2.509336 CCTCGATGCGGTGACACC 60.509 66.667 15.13 15.13 34.05 4.16
3112 3342 3.188786 GCCTCGATGCGGTGACAC 61.189 66.667 0.00 0.00 0.00 3.67
3113 3343 4.451150 GGCCTCGATGCGGTGACA 62.451 66.667 6.60 0.00 0.00 3.58
3116 3346 4.812476 TTCGGCCTCGATGCGGTG 62.812 66.667 17.29 6.11 45.51 4.94
3117 3347 4.514577 CTTCGGCCTCGATGCGGT 62.515 66.667 17.29 0.00 45.51 5.68
3118 3348 4.207281 TCTTCGGCCTCGATGCGG 62.207 66.667 12.93 12.93 45.51 5.69
3119 3349 2.956964 GTCTTCGGCCTCGATGCG 60.957 66.667 6.60 2.80 45.51 4.73
3120 3350 1.880340 CAGTCTTCGGCCTCGATGC 60.880 63.158 3.83 3.83 45.51 3.91
3121 3351 1.227089 CCAGTCTTCGGCCTCGATG 60.227 63.158 0.00 0.00 45.51 3.84
3122 3352 3.082579 GCCAGTCTTCGGCCTCGAT 62.083 63.158 0.00 0.00 45.51 3.59
3123 3353 3.760035 GCCAGTCTTCGGCCTCGA 61.760 66.667 0.00 0.00 44.22 4.04
3129 3359 1.740025 GAAATCCTTGCCAGTCTTCGG 59.260 52.381 0.00 0.00 0.00 4.30
3130 3360 2.675348 GAGAAATCCTTGCCAGTCTTCG 59.325 50.000 0.00 0.00 0.00 3.79
3131 3361 3.013219 GGAGAAATCCTTGCCAGTCTTC 58.987 50.000 0.00 0.00 0.00 2.87
3132 3362 2.291217 GGGAGAAATCCTTGCCAGTCTT 60.291 50.000 0.00 0.00 0.00 3.01
3133 3363 1.283321 GGGAGAAATCCTTGCCAGTCT 59.717 52.381 0.00 0.00 0.00 3.24
3134 3364 1.004745 TGGGAGAAATCCTTGCCAGTC 59.995 52.381 0.00 0.00 30.74 3.51
3135 3365 1.075601 TGGGAGAAATCCTTGCCAGT 58.924 50.000 0.00 0.00 30.74 4.00
3136 3366 2.449137 ATGGGAGAAATCCTTGCCAG 57.551 50.000 0.00 0.00 38.25 4.85
3137 3367 2.852449 AGTATGGGAGAAATCCTTGCCA 59.148 45.455 0.00 0.00 39.23 4.92
3138 3368 3.481453 GAGTATGGGAGAAATCCTTGCC 58.519 50.000 0.00 0.00 0.00 4.52
3139 3369 3.117888 TGGAGTATGGGAGAAATCCTTGC 60.118 47.826 0.00 0.00 0.00 4.01
3140 3370 4.778213 TGGAGTATGGGAGAAATCCTTG 57.222 45.455 0.00 0.00 0.00 3.61
3141 3371 5.163045 GGATTGGAGTATGGGAGAAATCCTT 60.163 44.000 0.00 0.00 38.89 3.36
3142 3372 4.352298 GGATTGGAGTATGGGAGAAATCCT 59.648 45.833 0.00 0.00 38.89 3.24
3143 3373 4.507512 GGGATTGGAGTATGGGAGAAATCC 60.508 50.000 0.00 0.00 40.45 3.01
3144 3374 4.507512 GGGGATTGGAGTATGGGAGAAATC 60.508 50.000 0.00 0.00 0.00 2.17
3145 3375 3.399305 GGGGATTGGAGTATGGGAGAAAT 59.601 47.826 0.00 0.00 0.00 2.17
3146 3376 2.783510 GGGGATTGGAGTATGGGAGAAA 59.216 50.000 0.00 0.00 0.00 2.52
3147 3377 2.294195 TGGGGATTGGAGTATGGGAGAA 60.294 50.000 0.00 0.00 0.00 2.87
3148 3378 1.296832 TGGGGATTGGAGTATGGGAGA 59.703 52.381 0.00 0.00 0.00 3.71
3149 3379 1.421646 GTGGGGATTGGAGTATGGGAG 59.578 57.143 0.00 0.00 0.00 4.30
3150 3380 1.518367 GTGGGGATTGGAGTATGGGA 58.482 55.000 0.00 0.00 0.00 4.37
3151 3381 0.478507 GGTGGGGATTGGAGTATGGG 59.521 60.000 0.00 0.00 0.00 4.00
3152 3382 0.108585 CGGTGGGGATTGGAGTATGG 59.891 60.000 0.00 0.00 0.00 2.74
3153 3383 0.535102 GCGGTGGGGATTGGAGTATG 60.535 60.000 0.00 0.00 0.00 2.39
3154 3384 1.705997 GGCGGTGGGGATTGGAGTAT 61.706 60.000 0.00 0.00 0.00 2.12
3155 3385 2.372074 GGCGGTGGGGATTGGAGTA 61.372 63.158 0.00 0.00 0.00 2.59
3156 3386 3.728373 GGCGGTGGGGATTGGAGT 61.728 66.667 0.00 0.00 0.00 3.85
3157 3387 4.506255 GGGCGGTGGGGATTGGAG 62.506 72.222 0.00 0.00 0.00 3.86
3159 3389 4.374584 TTGGGCGGTGGGGATTGG 62.375 66.667 0.00 0.00 0.00 3.16
3160 3390 3.068064 GTTGGGCGGTGGGGATTG 61.068 66.667 0.00 0.00 0.00 2.67
3161 3391 4.733542 CGTTGGGCGGTGGGGATT 62.734 66.667 0.00 0.00 36.85 3.01
3183 3413 4.459089 GTCTGGCTGGTCGGCTCC 62.459 72.222 1.58 0.00 39.32 4.70
3184 3414 4.459089 GGTCTGGCTGGTCGGCTC 62.459 72.222 1.58 0.00 39.32 4.70
3207 3437 3.520862 GATGGCGCATGGTGGTGG 61.521 66.667 10.83 0.00 0.00 4.61
3208 3438 3.879682 CGATGGCGCATGGTGGTG 61.880 66.667 10.83 0.00 0.00 4.17
3248 3478 2.280797 TGGTGTTCGCAGTGAGGC 60.281 61.111 0.00 0.00 0.00 4.70
3249 3479 1.961277 GGTGGTGTTCGCAGTGAGG 60.961 63.158 0.00 0.00 0.00 3.86
3250 3480 1.227527 TGGTGGTGTTCGCAGTGAG 60.228 57.895 0.00 0.00 0.00 3.51
3251 3481 1.522806 GTGGTGGTGTTCGCAGTGA 60.523 57.895 0.00 0.00 0.00 3.41
3252 3482 2.881266 CGTGGTGGTGTTCGCAGTG 61.881 63.158 0.00 0.00 0.00 3.66
3253 3483 2.587753 CGTGGTGGTGTTCGCAGT 60.588 61.111 0.00 0.00 0.00 4.40
3254 3484 2.279851 TCGTGGTGGTGTTCGCAG 60.280 61.111 0.00 0.00 0.00 5.18
3255 3485 2.279851 CTCGTGGTGGTGTTCGCA 60.280 61.111 0.00 0.00 0.00 5.10
3256 3486 3.041940 CCTCGTGGTGGTGTTCGC 61.042 66.667 0.00 0.00 0.00 4.70
3257 3487 3.041940 GCCTCGTGGTGGTGTTCG 61.042 66.667 5.26 0.00 35.27 3.95
3258 3488 2.668550 GGCCTCGTGGTGGTGTTC 60.669 66.667 5.26 0.00 35.27 3.18
3259 3489 2.958578 CTTGGCCTCGTGGTGGTGTT 62.959 60.000 3.32 0.00 35.27 3.32
3260 3490 3.476031 CTTGGCCTCGTGGTGGTGT 62.476 63.158 3.32 0.00 35.27 4.16
3261 3491 2.669569 CTTGGCCTCGTGGTGGTG 60.670 66.667 3.32 0.00 35.27 4.17
3262 3492 2.847234 TCTTGGCCTCGTGGTGGT 60.847 61.111 3.32 0.00 35.27 4.16
3263 3493 2.046892 CTCTTGGCCTCGTGGTGG 60.047 66.667 3.32 0.00 35.27 4.61
3264 3494 2.046892 CCTCTTGGCCTCGTGGTG 60.047 66.667 3.32 0.00 35.27 4.17
3265 3495 2.203788 TCCTCTTGGCCTCGTGGT 60.204 61.111 3.32 0.00 35.27 4.16
3266 3496 2.266055 GTCCTCTTGGCCTCGTGG 59.734 66.667 3.32 5.44 0.00 4.94
3267 3497 2.266055 GGTCCTCTTGGCCTCGTG 59.734 66.667 3.32 0.00 0.00 4.35
3268 3498 3.382832 CGGTCCTCTTGGCCTCGT 61.383 66.667 3.32 0.00 0.00 4.18
3269 3499 4.148825 CCGGTCCTCTTGGCCTCG 62.149 72.222 3.32 0.00 0.00 4.63
3270 3500 2.683933 TCCGGTCCTCTTGGCCTC 60.684 66.667 3.32 0.00 0.00 4.70
3271 3501 2.685380 CTCCGGTCCTCTTGGCCT 60.685 66.667 3.32 0.00 0.00 5.19
3272 3502 2.683933 TCTCCGGTCCTCTTGGCC 60.684 66.667 0.00 0.00 0.00 5.36
3273 3503 1.258445 TTCTCTCCGGTCCTCTTGGC 61.258 60.000 0.00 0.00 0.00 4.52
3274 3504 0.820871 CTTCTCTCCGGTCCTCTTGG 59.179 60.000 0.00 0.00 0.00 3.61
3275 3505 0.174617 GCTTCTCTCCGGTCCTCTTG 59.825 60.000 0.00 0.00 0.00 3.02
3276 3506 1.316706 CGCTTCTCTCCGGTCCTCTT 61.317 60.000 0.00 0.00 0.00 2.85
3277 3507 1.751162 CGCTTCTCTCCGGTCCTCT 60.751 63.158 0.00 0.00 0.00 3.69
3278 3508 2.802106 CGCTTCTCTCCGGTCCTC 59.198 66.667 0.00 0.00 0.00 3.71
3279 3509 3.453679 GCGCTTCTCTCCGGTCCT 61.454 66.667 0.00 0.00 0.00 3.85
3280 3510 4.516195 GGCGCTTCTCTCCGGTCC 62.516 72.222 7.64 0.00 0.00 4.46
3281 3511 4.516195 GGGCGCTTCTCTCCGGTC 62.516 72.222 7.64 0.00 0.00 4.79
3301 3531 4.475135 GTGCCGCTTCTCCCTCCC 62.475 72.222 0.00 0.00 0.00 4.30
3302 3532 4.475135 GGTGCCGCTTCTCCCTCC 62.475 72.222 0.00 0.00 0.00 4.30
3303 3533 4.821589 CGGTGCCGCTTCTCCCTC 62.822 72.222 0.00 0.00 0.00 4.30
3305 3535 4.821589 CTCGGTGCCGCTTCTCCC 62.822 72.222 5.64 0.00 39.59 4.30
3306 3536 4.821589 CCTCGGTGCCGCTTCTCC 62.822 72.222 5.64 0.00 39.59 3.71
3322 3552 4.772687 GTTCCCTCCCGTTCGGCC 62.773 72.222 5.66 0.00 0.00 6.13
3323 3553 4.772687 GGTTCCCTCCCGTTCGGC 62.773 72.222 5.66 0.00 0.00 5.54
3324 3554 3.315949 TGGTTCCCTCCCGTTCGG 61.316 66.667 4.08 4.08 0.00 4.30
3325 3555 2.047560 GTGGTTCCCTCCCGTTCG 60.048 66.667 0.00 0.00 0.00 3.95
3326 3556 2.181445 GAGGTGGTTCCCTCCCGTTC 62.181 65.000 0.00 0.00 44.49 3.95
3327 3557 2.122099 AGGTGGTTCCCTCCCGTT 60.122 61.111 0.00 0.00 37.86 4.44
3328 3558 2.606826 GAGGTGGTTCCCTCCCGT 60.607 66.667 0.00 0.00 44.49 5.28
3333 3563 2.928396 CGGTGGAGGTGGTTCCCT 60.928 66.667 0.00 0.00 36.35 4.20
3334 3564 4.717313 GCGGTGGAGGTGGTTCCC 62.717 72.222 0.00 0.00 36.35 3.97
3335 3565 4.717313 GGCGGTGGAGGTGGTTCC 62.717 72.222 0.00 0.00 37.77 3.62
3444 3674 3.615509 TTAGCGGGCCTGTTTCGGG 62.616 63.158 14.55 0.00 0.00 5.14
3445 3675 2.046700 TTAGCGGGCCTGTTTCGG 60.047 61.111 14.55 0.00 0.00 4.30
3446 3676 2.750888 GCTTAGCGGGCCTGTTTCG 61.751 63.158 14.55 3.33 0.00 3.46
3447 3677 2.407428 GGCTTAGCGGGCCTGTTTC 61.407 63.158 14.55 0.00 45.57 2.78
3448 3678 2.361230 GGCTTAGCGGGCCTGTTT 60.361 61.111 14.55 4.61 45.57 2.83
3504 3734 4.479993 GATGAGCGGCAGGGTGCT 62.480 66.667 1.45 0.00 44.28 4.40
3516 3746 3.610669 CGGGGGAGAGGCGATGAG 61.611 72.222 0.00 0.00 0.00 2.90
3535 3765 3.878667 GGGGGATGCTTCCGGGAG 61.879 72.222 4.95 4.95 43.63 4.30
3536 3766 4.750695 TGGGGGATGCTTCCGGGA 62.751 66.667 12.20 0.00 43.63 5.14
3537 3767 1.715019 TATTGGGGGATGCTTCCGGG 61.715 60.000 12.20 0.00 43.63 5.73
3538 3768 0.250901 CTATTGGGGGATGCTTCCGG 60.251 60.000 12.20 0.00 43.63 5.14
3539 3769 0.890996 GCTATTGGGGGATGCTTCCG 60.891 60.000 12.20 0.00 43.63 4.30
3540 3770 0.480252 AGCTATTGGGGGATGCTTCC 59.520 55.000 10.18 10.18 41.77 3.46
3541 3771 1.143684 TCAGCTATTGGGGGATGCTTC 59.856 52.381 0.00 0.00 0.00 3.86
3542 3772 1.144503 CTCAGCTATTGGGGGATGCTT 59.855 52.381 0.00 0.00 0.00 3.91
3543 3773 0.769873 CTCAGCTATTGGGGGATGCT 59.230 55.000 0.00 0.00 0.00 3.79
3544 3774 0.767375 TCTCAGCTATTGGGGGATGC 59.233 55.000 0.00 0.00 0.00 3.91
3545 3775 2.333069 TCTCTCAGCTATTGGGGGATG 58.667 52.381 0.00 0.00 29.37 3.51
3579 3809 3.006247 GTCTTGGAGAATGAGCCTTCAC 58.994 50.000 0.00 0.00 35.83 3.18
3588 3818 3.533606 ATGTCCTCGTCTTGGAGAATG 57.466 47.619 0.00 0.00 36.08 2.67
3601 3831 2.094700 TGCGAGTGTAGTGAATGTCCTC 60.095 50.000 0.00 0.00 0.00 3.71
3621 3851 9.988815 ATTATGTAAGCTTTGGAGAGTACTATG 57.011 33.333 3.20 0.00 0.00 2.23
3622 3852 9.988815 CATTATGTAAGCTTTGGAGAGTACTAT 57.011 33.333 3.20 0.00 0.00 2.12
3660 3912 4.880696 GCTCCTGAAGATGCTTTCATACTT 59.119 41.667 0.00 0.00 36.55 2.24
3697 3949 9.793252 GATTGACAATTTTGATAGCAGTAACAT 57.207 29.630 1.39 0.00 0.00 2.71
3708 3960 3.763360 TGCGGGAGATTGACAATTTTGAT 59.237 39.130 1.39 0.00 0.00 2.57
3711 3963 3.420893 TCTGCGGGAGATTGACAATTTT 58.579 40.909 1.39 0.00 0.00 1.82
3718 3970 0.324614 TTTGCTCTGCGGGAGATTGA 59.675 50.000 10.17 0.00 44.45 2.57
3723 3975 1.004560 TGAGTTTGCTCTGCGGGAG 60.005 57.895 0.00 0.00 44.49 4.30
3727 3979 1.599071 TGAAAGTGAGTTTGCTCTGCG 59.401 47.619 0.00 0.00 42.13 5.18
3760 4012 3.633361 CTGAAACCTCAGTCCACCC 57.367 57.895 0.00 0.00 43.64 4.61
3837 4089 6.350194 GGTTTTGTCTGACCTTCTGTCTTTTT 60.350 38.462 5.17 0.00 44.75 1.94
3838 4090 5.125578 GGTTTTGTCTGACCTTCTGTCTTTT 59.874 40.000 5.17 0.00 44.75 2.27
3839 4091 4.640647 GGTTTTGTCTGACCTTCTGTCTTT 59.359 41.667 5.17 0.00 44.75 2.52
3840 4092 4.200092 GGTTTTGTCTGACCTTCTGTCTT 58.800 43.478 5.17 0.00 44.75 3.01
3841 4093 3.741388 CGGTTTTGTCTGACCTTCTGTCT 60.741 47.826 5.17 0.00 44.75 3.41
3842 4094 2.544267 CGGTTTTGTCTGACCTTCTGTC 59.456 50.000 5.17 0.00 44.72 3.51
3843 4095 2.169769 TCGGTTTTGTCTGACCTTCTGT 59.830 45.455 5.17 0.00 33.69 3.41
3844 4096 2.833794 TCGGTTTTGTCTGACCTTCTG 58.166 47.619 5.17 0.00 33.69 3.02
3845 4097 3.771577 ATCGGTTTTGTCTGACCTTCT 57.228 42.857 5.17 0.00 33.69 2.85
3846 4098 4.392138 CCTAATCGGTTTTGTCTGACCTTC 59.608 45.833 5.17 0.00 33.69 3.46
3847 4099 4.041198 TCCTAATCGGTTTTGTCTGACCTT 59.959 41.667 5.17 0.00 33.69 3.50
3848 4100 3.581332 TCCTAATCGGTTTTGTCTGACCT 59.419 43.478 5.17 0.00 33.69 3.85
3849 4101 3.933332 CTCCTAATCGGTTTTGTCTGACC 59.067 47.826 5.17 0.00 0.00 4.02
3850 4102 4.817517 TCTCCTAATCGGTTTTGTCTGAC 58.182 43.478 0.00 0.00 0.00 3.51
3896 4148 4.216902 CAGAGTGCATGAAACTGAATGGAA 59.783 41.667 6.24 0.00 0.00 3.53
3934 4187 1.494721 GGGGGAGTGGAAATATGAGCA 59.505 52.381 0.00 0.00 0.00 4.26
3952 4211 1.246737 GCCAAGTCAAGGAGCAAGGG 61.247 60.000 0.00 0.00 0.00 3.95
4016 4275 5.316158 AGGCTATTCACAGATAAGGCAAT 57.684 39.130 0.00 0.00 0.00 3.56
4027 4286 5.777223 AGCTGATGTATCTAGGCTATTCACA 59.223 40.000 0.00 0.00 0.00 3.58
4121 4380 5.300286 AGAATGGCTCATGTTTACCTAATGC 59.700 40.000 0.00 0.00 0.00 3.56
4152 4411 7.538575 CAAGAAGTTCCTGGTACAAATTATGG 58.461 38.462 6.23 0.00 38.70 2.74
4181 4440 8.119226 GCGATATATAAGAAAATCACTGATGGC 58.881 37.037 0.00 0.00 0.00 4.40
4375 4634 2.751806 TGTCTGTGTGTGCAATTTGTGA 59.248 40.909 0.00 0.00 0.00 3.58
4376 4635 2.853594 GTGTCTGTGTGTGCAATTTGTG 59.146 45.455 0.00 0.00 0.00 3.33
4447 4708 1.032014 GGCTTGGTGCAACTGAAGAA 58.968 50.000 2.04 0.00 45.15 2.52
4642 4903 1.763770 CTGAGGTTGTTCCAGGGCT 59.236 57.895 0.00 0.00 39.02 5.19
4730 4991 7.558807 ACCATCATACTTTCATGACATGATTGT 59.441 33.333 18.62 19.66 39.39 2.71
4747 5008 5.405571 CGTTTCAGCCTACATACCATCATAC 59.594 44.000 0.00 0.00 0.00 2.39
4750 5011 3.449377 TCGTTTCAGCCTACATACCATCA 59.551 43.478 0.00 0.00 0.00 3.07
4789 5050 9.477484 AAAGTTATATCGAGGTTGTATTGCTAG 57.523 33.333 0.00 0.00 0.00 3.42
4791 5052 9.998106 ATAAAGTTATATCGAGGTTGTATTGCT 57.002 29.630 0.00 0.00 0.00 3.91
4912 5205 6.108015 TCCGTTGACATTTGTACCTTATACC 58.892 40.000 0.00 0.00 0.00 2.73
4958 5251 3.971245 ACTTTTCGCATTCTCCTCTCT 57.029 42.857 0.00 0.00 0.00 3.10
5013 5306 9.093458 AGAAGGGAATTGTTTTGTTTCTCATAT 57.907 29.630 0.00 0.00 0.00 1.78
5014 5307 8.477419 AGAAGGGAATTGTTTTGTTTCTCATA 57.523 30.769 0.00 0.00 0.00 2.15
5037 5330 7.029563 GCTTGTTCTGTTTCTTTTCTTTGAGA 58.970 34.615 0.00 0.00 0.00 3.27
5039 5332 6.924111 AGCTTGTTCTGTTTCTTTTCTTTGA 58.076 32.000 0.00 0.00 0.00 2.69
5055 5348 6.810911 TCACTCCATCTATTCTAGCTTGTTC 58.189 40.000 0.00 0.00 0.00 3.18
5070 5363 8.150945 AGTATGTTACCACAATATCACTCCATC 58.849 37.037 0.00 0.00 36.16 3.51
5085 5378 6.338146 GTTGAGACATGCTAGTATGTTACCA 58.662 40.000 24.74 18.97 41.15 3.25
5109 5402 2.973420 GGCGAACGAGGACATAAGG 58.027 57.895 0.00 0.00 0.00 2.69
5129 5424 7.250569 TGACAACAAGACATGAACTCTTTTTC 58.749 34.615 0.00 0.05 0.00 2.29
5140 5436 4.516321 TGGAGTTCATGACAACAAGACATG 59.484 41.667 0.00 0.00 46.99 3.21
5178 5475 5.827797 AGTGAAAGACAAGCCAACAAGATTA 59.172 36.000 0.00 0.00 0.00 1.75
5186 5483 3.206150 GAGACAGTGAAAGACAAGCCAA 58.794 45.455 0.00 0.00 0.00 4.52
5197 5494 3.194861 CGAAACTTGGTGAGACAGTGAA 58.805 45.455 0.00 0.00 0.00 3.18
5202 5499 3.128349 GTTAGCGAAACTTGGTGAGACA 58.872 45.455 0.00 0.00 35.05 3.41
5242 5539 1.983224 CCATCCGACCAGTTGAGGT 59.017 57.895 0.00 0.00 46.82 3.85
5305 5602 1.696336 TCTCCAGAATATGCAGGCCTC 59.304 52.381 0.00 0.00 0.00 4.70
5322 5619 2.147150 GTTCCACTTTGCTCAGGTCTC 58.853 52.381 0.00 0.00 0.00 3.36
5344 5641 5.131642 TCCATGGTCTTCTTCTTCATAGCAT 59.868 40.000 12.58 0.00 0.00 3.79
5404 5701 0.396435 TCACCTTCACGAACATGGCT 59.604 50.000 0.00 0.00 0.00 4.75
5440 5737 3.394274 TCAGGTCAATCTTTCTCCCAACA 59.606 43.478 0.00 0.00 0.00 3.33
5531 5828 3.197265 GCAGTGCAAACCAAAGATTGTT 58.803 40.909 11.09 0.00 0.00 2.83
5558 5861 5.999044 AGCAAGATGGAGTTTGATCATACT 58.001 37.500 17.41 17.41 0.00 2.12
5597 5901 4.766373 TGAAATCAACCAAGCAGCTCATAA 59.234 37.500 0.00 0.00 0.00 1.90
5755 6059 1.682323 GATCCCTCGACTTACTCCCAC 59.318 57.143 0.00 0.00 0.00 4.61
5774 6078 4.367023 GGCGTATATGCCGGCCGA 62.367 66.667 30.73 12.62 46.75 5.54
5803 6107 5.534278 TCAATGACCACTTCAACTTGCATAA 59.466 36.000 0.00 0.00 37.92 1.90
5804 6108 5.069318 TCAATGACCACTTCAACTTGCATA 58.931 37.500 0.00 0.00 37.92 3.14
5824 6128 2.679837 GCCTGCAAGAAAGATCGATCAA 59.320 45.455 26.47 1.84 34.07 2.57
5927 6231 0.242017 GTGCCAGCATCAAGAACACC 59.758 55.000 0.00 0.00 0.00 4.16
5948 6252 1.278937 CGATGTGCAGCTGCTATGC 59.721 57.895 36.61 23.66 44.11 3.14
5953 6257 0.727122 GACAAACGATGTGCAGCTGC 60.727 55.000 31.89 31.89 44.12 5.25
5957 6261 2.223845 TGTGATGACAAACGATGTGCAG 59.776 45.455 3.45 0.00 44.12 4.41
5964 6268 6.482835 CAGTAAACTTTGTGATGACAAACGA 58.517 36.000 6.36 0.00 45.26 3.85
5997 6301 1.266175 CGGTTGTACTGTCACTCGACT 59.734 52.381 0.00 0.00 43.06 4.18
6013 6317 1.358759 CCGCAGAAAGCAAACGGTT 59.641 52.632 0.00 0.00 46.13 4.44
6068 6374 1.001974 TGTCATTTGCAGTCCGCTAGT 59.998 47.619 0.00 0.00 43.06 2.57
6074 6380 2.229792 TCCTGTTGTCATTTGCAGTCC 58.770 47.619 0.00 0.00 0.00 3.85
6095 6404 2.110578 GCAGGTTGGGGCTATGAAATT 58.889 47.619 0.00 0.00 0.00 1.82
6099 6408 0.106569 CATGCAGGTTGGGGCTATGA 60.107 55.000 0.00 0.00 0.00 2.15
6106 6415 0.549950 AGAGATCCATGCAGGTTGGG 59.450 55.000 5.01 0.00 39.02 4.12
6174 6483 0.969409 ACTACGCCCCTAGACACACC 60.969 60.000 0.00 0.00 0.00 4.16
6322 6637 0.966179 TCAGCATGTCAGTGTACCGT 59.034 50.000 0.00 0.00 37.40 4.83
6325 6640 5.174395 AGAAGATTCAGCATGTCAGTGTAC 58.826 41.667 0.00 0.00 37.40 2.90
6332 6647 3.122297 CGAGGAGAAGATTCAGCATGTC 58.878 50.000 0.00 0.00 37.40 3.06
6358 6676 1.807142 TGCACGCCGATCAATAAAACA 59.193 42.857 0.00 0.00 0.00 2.83
6384 6702 7.308770 CCTCAAACAAACTTTGATGAGAGCATA 60.309 37.037 26.35 5.90 43.79 3.14
6421 6739 4.396166 GTGACAAGATTCATGTTCCCGAAT 59.604 41.667 0.00 0.00 34.58 3.34
6450 6771 0.038709 GGCATAAACTGGTTTGCGCA 60.039 50.000 5.66 5.66 34.67 6.09
6459 6786 2.489329 CCACCACAAGAGGCATAAACTG 59.511 50.000 0.00 0.00 0.00 3.16
6471 6798 5.505173 GGATTGTCATAATCCACCACAAG 57.495 43.478 8.28 0.00 44.33 3.16
6504 6843 1.136305 CTCCTGGCGATTTCTCGGTAA 59.864 52.381 0.00 0.00 45.15 2.85
6507 6846 0.807667 CACTCCTGGCGATTTCTCGG 60.808 60.000 0.00 0.00 45.15 4.63
6518 6857 1.220206 CAGTAGGCAGCACTCCTGG 59.780 63.158 0.00 0.00 42.03 4.45
6519 6858 1.449246 GCAGTAGGCAGCACTCCTG 60.449 63.158 0.00 0.00 43.97 3.86
6565 6904 0.539438 TGTCCCCTTCCACAACATGC 60.539 55.000 0.00 0.00 0.00 4.06
6572 6911 0.967380 CTGGCAATGTCCCCTTCCAC 60.967 60.000 0.00 0.00 0.00 4.02
6596 6935 2.666272 TCAATGGTGGGTTGCTAACA 57.334 45.000 0.00 0.00 0.00 2.41
6600 6939 1.895131 GTGAATCAATGGTGGGTTGCT 59.105 47.619 0.00 0.00 0.00 3.91
6612 6951 5.356426 TCGTGTTCTTGAGAAGTGAATCAA 58.644 37.500 0.00 0.00 34.27 2.57
6639 6978 4.530553 TCTTGTATCAAGGCCTGTAACTCA 59.469 41.667 5.69 0.00 0.00 3.41
6667 7006 3.991605 ACGCACGCTTTTATGTTCTAG 57.008 42.857 0.00 0.00 0.00 2.43
6668 7007 3.665848 GCAACGCACGCTTTTATGTTCTA 60.666 43.478 0.00 0.00 0.00 2.10
6669 7008 2.916111 CAACGCACGCTTTTATGTTCT 58.084 42.857 0.00 0.00 0.00 3.01
6670 7009 1.382088 GCAACGCACGCTTTTATGTTC 59.618 47.619 0.00 0.00 0.00 3.18
6671 7010 1.404477 GCAACGCACGCTTTTATGTT 58.596 45.000 0.00 0.00 0.00 2.71
6672 7011 0.386731 GGCAACGCACGCTTTTATGT 60.387 50.000 0.00 0.00 0.00 2.29
6673 7012 2.348856 GGCAACGCACGCTTTTATG 58.651 52.632 0.00 0.00 0.00 1.90
6674 7013 4.859784 GGCAACGCACGCTTTTAT 57.140 50.000 0.00 0.00 0.00 1.40
6690 7029 3.238241 CAACGTAGACGAGCGCGG 61.238 66.667 15.86 0.00 43.17 6.46
6691 7030 1.721257 CTTCAACGTAGACGAGCGCG 61.721 60.000 8.75 8.75 43.02 6.86
6692 7031 0.453950 TCTTCAACGTAGACGAGCGC 60.454 55.000 9.41 0.00 43.02 5.92
6693 7032 1.959747 TTCTTCAACGTAGACGAGCG 58.040 50.000 9.41 0.00 43.02 5.03
6694 7033 3.306818 ACTTTCTTCAACGTAGACGAGC 58.693 45.455 9.41 0.00 43.02 5.03
6695 7034 5.512082 CCATACTTTCTTCAACGTAGACGAG 59.488 44.000 9.41 1.15 43.02 4.18
6696 7035 5.048504 ACCATACTTTCTTCAACGTAGACGA 60.049 40.000 9.41 0.00 43.02 4.20
6697 7036 5.159209 ACCATACTTTCTTCAACGTAGACG 58.841 41.667 0.00 0.00 46.33 4.18
6698 7037 9.793252 TTATACCATACTTTCTTCAACGTAGAC 57.207 33.333 0.00 0.00 0.00 2.59
6702 7041 9.886132 AGATTTATACCATACTTTCTTCAACGT 57.114 29.630 0.00 0.00 0.00 3.99
6744 7083 9.866655 AGCATATTTGATCCAAATTCTAGGTTA 57.133 29.630 9.78 0.00 40.60 2.85
6745 7084 8.773033 AGCATATTTGATCCAAATTCTAGGTT 57.227 30.769 9.78 0.00 40.60 3.50
6746 7085 8.223330 AGAGCATATTTGATCCAAATTCTAGGT 58.777 33.333 9.78 4.61 40.60 3.08
6747 7086 8.632906 AGAGCATATTTGATCCAAATTCTAGG 57.367 34.615 9.78 0.00 40.60 3.02
6750 7089 9.240734 GGATAGAGCATATTTGATCCAAATTCT 57.759 33.333 9.78 9.03 40.60 2.40
6751 7090 9.017509 TGGATAGAGCATATTTGATCCAAATTC 57.982 33.333 9.78 2.93 40.60 2.17
6752 7091 8.945195 TGGATAGAGCATATTTGATCCAAATT 57.055 30.769 9.78 0.00 40.60 1.82
6762 7101 9.486497 CGCTGAATATATGGATAGAGCATATTT 57.514 33.333 0.00 0.00 0.00 1.40
6763 7102 8.646004 ACGCTGAATATATGGATAGAGCATATT 58.354 33.333 0.00 0.00 0.00 1.28
6764 7103 8.187913 ACGCTGAATATATGGATAGAGCATAT 57.812 34.615 0.00 0.00 0.00 1.78
6765 7104 7.588497 ACGCTGAATATATGGATAGAGCATA 57.412 36.000 0.00 0.00 0.00 3.14
6766 7105 6.477053 ACGCTGAATATATGGATAGAGCAT 57.523 37.500 0.00 0.00 0.00 3.79
6767 7106 5.921962 ACGCTGAATATATGGATAGAGCA 57.078 39.130 0.00 0.00 0.00 4.26
6768 7107 6.333416 TGAACGCTGAATATATGGATAGAGC 58.667 40.000 0.00 0.00 0.00 4.09
6769 7108 7.042858 GCATGAACGCTGAATATATGGATAGAG 60.043 40.741 0.00 0.00 0.00 2.43
6770 7109 6.758416 GCATGAACGCTGAATATATGGATAGA 59.242 38.462 0.00 0.00 0.00 1.98
6771 7110 6.536224 TGCATGAACGCTGAATATATGGATAG 59.464 38.462 0.00 0.00 0.00 2.08
6772 7111 6.405538 TGCATGAACGCTGAATATATGGATA 58.594 36.000 0.00 0.00 0.00 2.59
6773 7112 5.247862 TGCATGAACGCTGAATATATGGAT 58.752 37.500 0.00 0.00 0.00 3.41
6774 7113 4.640364 TGCATGAACGCTGAATATATGGA 58.360 39.130 0.00 0.00 0.00 3.41
6775 7114 5.361135 TTGCATGAACGCTGAATATATGG 57.639 39.130 0.00 0.00 0.00 2.74
6776 7115 8.445493 TCTTATTGCATGAACGCTGAATATATG 58.555 33.333 0.00 0.00 0.00 1.78
6777 7116 8.552083 TCTTATTGCATGAACGCTGAATATAT 57.448 30.769 0.00 0.00 0.00 0.86
6778 7117 7.657354 ACTCTTATTGCATGAACGCTGAATATA 59.343 33.333 0.00 0.00 0.00 0.86
6779 7118 6.484643 ACTCTTATTGCATGAACGCTGAATAT 59.515 34.615 0.00 0.00 0.00 1.28
6780 7119 5.817296 ACTCTTATTGCATGAACGCTGAATA 59.183 36.000 0.00 0.00 0.00 1.75
6781 7120 4.637534 ACTCTTATTGCATGAACGCTGAAT 59.362 37.500 0.00 0.00 0.00 2.57
6782 7121 4.002982 ACTCTTATTGCATGAACGCTGAA 58.997 39.130 0.00 0.00 0.00 3.02
6783 7122 3.599343 ACTCTTATTGCATGAACGCTGA 58.401 40.909 0.00 0.00 0.00 4.26
6784 7123 5.469373 TTACTCTTATTGCATGAACGCTG 57.531 39.130 0.00 0.00 0.00 5.18
6785 7124 6.986817 ACTATTACTCTTATTGCATGAACGCT 59.013 34.615 0.00 0.00 0.00 5.07
6786 7125 7.178712 ACTATTACTCTTATTGCATGAACGC 57.821 36.000 0.00 0.00 0.00 4.84
6812 7151 7.226720 ACATTTCGTGTTTCAGTTTAGACTGAT 59.773 33.333 16.17 0.00 46.89 2.90
6814 7153 6.715464 ACATTTCGTGTTTCAGTTTAGACTG 58.285 36.000 7.08 7.08 45.78 3.51
6815 7154 6.920569 ACATTTCGTGTTTCAGTTTAGACT 57.079 33.333 0.00 0.00 38.01 3.24
6840 7179 7.782644 TCCCTGTCTTTCTCTTTAATCCAAAAA 59.217 33.333 0.00 0.00 0.00 1.94
6841 7180 7.294584 TCCCTGTCTTTCTCTTTAATCCAAAA 58.705 34.615 0.00 0.00 0.00 2.44
6842 7181 6.848069 TCCCTGTCTTTCTCTTTAATCCAAA 58.152 36.000 0.00 0.00 0.00 3.28
6843 7182 6.272324 TCTCCCTGTCTTTCTCTTTAATCCAA 59.728 38.462 0.00 0.00 0.00 3.53
6844 7183 5.785423 TCTCCCTGTCTTTCTCTTTAATCCA 59.215 40.000 0.00 0.00 0.00 3.41
6845 7184 6.301169 TCTCCCTGTCTTTCTCTTTAATCC 57.699 41.667 0.00 0.00 0.00 3.01
6846 7185 6.345298 CCTCTCCCTGTCTTTCTCTTTAATC 58.655 44.000 0.00 0.00 0.00 1.75
6847 7186 5.190726 CCCTCTCCCTGTCTTTCTCTTTAAT 59.809 44.000 0.00 0.00 0.00 1.40
6848 7187 4.532521 CCCTCTCCCTGTCTTTCTCTTTAA 59.467 45.833 0.00 0.00 0.00 1.52
6849 7188 4.097418 CCCTCTCCCTGTCTTTCTCTTTA 58.903 47.826 0.00 0.00 0.00 1.85
6850 7189 2.909662 CCCTCTCCCTGTCTTTCTCTTT 59.090 50.000 0.00 0.00 0.00 2.52
6851 7190 2.545810 CCCTCTCCCTGTCTTTCTCTT 58.454 52.381 0.00 0.00 0.00 2.85
6852 7191 1.273552 CCCCTCTCCCTGTCTTTCTCT 60.274 57.143 0.00 0.00 0.00 3.10
6853 7192 1.199615 CCCCTCTCCCTGTCTTTCTC 58.800 60.000 0.00 0.00 0.00 2.87
6854 7193 0.494095 ACCCCTCTCCCTGTCTTTCT 59.506 55.000 0.00 0.00 0.00 2.52
6855 7194 0.615850 CACCCCTCTCCCTGTCTTTC 59.384 60.000 0.00 0.00 0.00 2.62
6856 7195 0.193574 TCACCCCTCTCCCTGTCTTT 59.806 55.000 0.00 0.00 0.00 2.52
6857 7196 0.545548 GTCACCCCTCTCCCTGTCTT 60.546 60.000 0.00 0.00 0.00 3.01
6858 7197 1.079438 GTCACCCCTCTCCCTGTCT 59.921 63.158 0.00 0.00 0.00 3.41
6859 7198 1.990614 GGTCACCCCTCTCCCTGTC 60.991 68.421 0.00 0.00 0.00 3.51
6860 7199 2.122954 GGTCACCCCTCTCCCTGT 59.877 66.667 0.00 0.00 0.00 4.00
6861 7200 0.916358 ATTGGTCACCCCTCTCCCTG 60.916 60.000 0.00 0.00 0.00 4.45
6862 7201 0.916358 CATTGGTCACCCCTCTCCCT 60.916 60.000 0.00 0.00 0.00 4.20
6863 7202 1.609783 CATTGGTCACCCCTCTCCC 59.390 63.158 0.00 0.00 0.00 4.30
6864 7203 1.609783 CCATTGGTCACCCCTCTCC 59.390 63.158 0.00 0.00 0.00 3.71
6865 7204 1.609783 CCCATTGGTCACCCCTCTC 59.390 63.158 1.20 0.00 0.00 3.20
6866 7205 1.930656 CCCCATTGGTCACCCCTCT 60.931 63.158 1.20 0.00 0.00 3.69
6867 7206 2.683475 CCCCATTGGTCACCCCTC 59.317 66.667 1.20 0.00 0.00 4.30
6868 7207 3.672503 GCCCCATTGGTCACCCCT 61.673 66.667 1.20 0.00 36.04 4.79
6870 7209 4.360405 ACGCCCCATTGGTCACCC 62.360 66.667 1.20 0.00 36.04 4.61
6871 7210 3.061848 CACGCCCCATTGGTCACC 61.062 66.667 1.20 0.00 36.04 4.02
6872 7211 1.175983 TTTCACGCCCCATTGGTCAC 61.176 55.000 1.20 0.00 36.04 3.67
6873 7212 0.468214 TTTTCACGCCCCATTGGTCA 60.468 50.000 1.20 0.00 36.04 4.02
6874 7213 0.676736 TTTTTCACGCCCCATTGGTC 59.323 50.000 1.20 0.00 36.04 4.02
6875 7214 2.827715 TTTTTCACGCCCCATTGGT 58.172 47.368 1.20 0.00 36.04 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.