Multiple sequence alignment - TraesCS7A01G320000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G320000 chr7A 100.000 5987 0 0 1 5987 461803357 461809343 0.000000e+00 11057.0
1 TraesCS7A01G320000 chr7A 85.050 1398 173 21 3587 4979 462342093 462343459 0.000000e+00 1391.0
2 TraesCS7A01G320000 chr7A 82.818 291 29 13 2108 2381 462339901 462340187 2.160000e-59 241.0
3 TraesCS7A01G320000 chr7A 76.040 505 73 39 1545 2027 462339334 462339812 1.010000e-52 219.0
4 TraesCS7A01G320000 chr7A 77.341 331 60 11 2641 2968 462340558 462340876 1.330000e-41 182.0
5 TraesCS7A01G320000 chr7A 86.111 72 10 0 1356 1427 462338974 462339045 1.790000e-10 78.7
6 TraesCS7A01G320000 chr7A 92.683 41 2 1 54 93 11353008 11352968 2.330000e-04 58.4
7 TraesCS7A01G320000 chr7B 95.369 4168 154 22 897 5040 412769368 412773520 0.000000e+00 6591.0
8 TraesCS7A01G320000 chr7B 84.753 1397 178 20 3587 4979 413109421 413110786 0.000000e+00 1367.0
9 TraesCS7A01G320000 chr7B 90.185 917 71 9 892 1797 209841904 209842812 0.000000e+00 1177.0
10 TraesCS7A01G320000 chr7B 86.778 779 66 18 135 877 412768434 412769211 0.000000e+00 833.0
11 TraesCS7A01G320000 chr7B 83.624 287 30 13 2108 2381 413107108 413107390 2.770000e-63 254.0
12 TraesCS7A01G320000 chr7B 75.410 549 86 40 1502 2027 413106497 413107019 2.810000e-53 220.0
13 TraesCS7A01G320000 chr7B 78.248 331 57 12 2641 2968 413107761 413108079 1.320000e-46 198.0
14 TraesCS7A01G320000 chr7B 96.970 33 0 1 5285 5316 697067031 697067063 3.000000e-03 54.7
15 TraesCS7A01G320000 chr7D 96.346 3065 100 7 2081 5138 403094408 403097467 0.000000e+00 5029.0
16 TraesCS7A01G320000 chr7D 91.087 1223 90 11 892 2104 403093138 403094351 0.000000e+00 1637.0
17 TraesCS7A01G320000 chr7D 81.958 1685 228 47 3320 4979 403783537 403785170 0.000000e+00 1358.0
18 TraesCS7A01G320000 chr7D 88.778 704 48 13 208 880 403092327 403093030 0.000000e+00 833.0
19 TraesCS7A01G320000 chr7D 76.210 496 74 36 1553 2027 403780972 403781444 7.810000e-54 222.0
20 TraesCS7A01G320000 chr7D 89.167 120 13 0 2108 2227 403781533 403781652 3.740000e-32 150.0
21 TraesCS7A01G320000 chr7D 79.227 207 25 13 2308 2504 403781714 403781912 1.750000e-25 128.0
22 TraesCS7A01G320000 chr7D 83.871 93 11 4 135 225 403092219 403092309 1.070000e-12 86.1
23 TraesCS7A01G320000 chr7D 85.915 71 10 0 1356 1426 403780739 403780809 6.430000e-10 76.8
24 TraesCS7A01G320000 chr3B 91.415 1689 135 4 3311 4990 567005353 567007040 0.000000e+00 2307.0
25 TraesCS7A01G320000 chr3B 84.325 1429 153 38 1904 3286 567003871 567005274 0.000000e+00 1332.0
26 TraesCS7A01G320000 chr3B 90.611 916 68 7 892 1797 126557512 126558419 0.000000e+00 1199.0
27 TraesCS7A01G320000 chr3B 82.288 813 94 23 1101 1890 567003034 567003819 0.000000e+00 658.0
28 TraesCS7A01G320000 chr3B 80.233 258 29 14 5723 5972 530614719 530614962 2.220000e-39 174.0
29 TraesCS7A01G320000 chr3B 86.517 89 12 0 4738 4826 792988009 792988097 1.370000e-16 99.0
30 TraesCS7A01G320000 chr3D 90.257 1714 156 5 3311 5014 433806693 433808405 0.000000e+00 2230.0
31 TraesCS7A01G320000 chr3D 82.774 2264 260 67 1101 3286 433804398 433806609 0.000000e+00 1901.0
32 TraesCS7A01G320000 chr3D 80.982 652 82 21 5325 5967 504421013 504420395 4.200000e-131 479.0
33 TraesCS7A01G320000 chr3A 90.296 1690 154 5 3311 4992 572448912 572450599 0.000000e+00 2204.0
34 TraesCS7A01G320000 chr3A 83.170 2454 279 71 892 3286 572446452 572448830 0.000000e+00 2121.0
35 TraesCS7A01G320000 chr3A 89.912 912 75 6 896 1797 238347824 238346920 0.000000e+00 1158.0
36 TraesCS7A01G320000 chr3A 79.814 322 53 10 2970 3288 610887226 610886914 2.170000e-54 224.0
37 TraesCS7A01G320000 chr3A 79.904 209 32 7 3083 3288 175935728 175935929 1.740000e-30 145.0
38 TraesCS7A01G320000 chr3A 96.970 33 1 0 5285 5317 61450615 61450583 8.380000e-04 56.5
39 TraesCS7A01G320000 chr5A 84.424 1406 183 21 3587 4983 503499308 503497930 0.000000e+00 1351.0
40 TraesCS7A01G320000 chr5A 83.566 572 70 19 5320 5877 398255751 398256312 1.150000e-141 514.0
41 TraesCS7A01G320000 chr5A 78.781 443 57 23 2108 2520 503503665 503503230 4.600000e-66 263.0
42 TraesCS7A01G320000 chr5A 91.011 89 8 0 3130 3218 503499679 503499591 2.930000e-23 121.0
43 TraesCS7A01G320000 chr5A 84.058 69 11 0 1358 1426 503504724 503504656 3.870000e-07 67.6
44 TraesCS7A01G320000 chr2D 91.457 913 61 7 895 1797 43860584 43859679 0.000000e+00 1238.0
45 TraesCS7A01G320000 chr2D 82.910 591 70 18 5325 5894 14347484 14346904 2.490000e-138 503.0
46 TraesCS7A01G320000 chr2D 82.923 568 62 19 5414 5969 630084889 630085433 4.200000e-131 479.0
47 TraesCS7A01G320000 chr2D 80.769 676 69 31 5325 5969 569682259 569681614 7.020000e-129 472.0
48 TraesCS7A01G320000 chr2D 79.835 486 50 21 5506 5987 423170158 423169717 1.620000e-80 311.0
49 TraesCS7A01G320000 chr2D 87.387 111 8 5 5877 5987 456960869 456960765 8.150000e-24 122.0
50 TraesCS7A01G320000 chr2D 100.000 28 0 0 58 85 206238441 206238468 1.100000e-02 52.8
51 TraesCS7A01G320000 chr5D 90.175 916 68 8 892 1797 152524699 152525602 0.000000e+00 1173.0
52 TraesCS7A01G320000 chr5D 81.973 294 29 17 2108 2382 398489876 398489588 1.680000e-55 228.0
53 TraesCS7A01G320000 chr5D 74.162 507 78 38 1551 2027 398490436 398489953 1.730000e-35 161.0
54 TraesCS7A01G320000 chr5D 92.683 82 6 0 3138 3219 398488594 398488513 1.050000e-22 119.0
55 TraesCS7A01G320000 chr5D 85.714 70 10 0 1357 1426 398491120 398491051 2.310000e-09 75.0
56 TraesCS7A01G320000 chr5D 86.765 68 6 3 954 1020 398491741 398491676 8.320000e-09 73.1
57 TraesCS7A01G320000 chr5D 100.000 28 0 0 58 85 449281407 449281380 1.100000e-02 52.8
58 TraesCS7A01G320000 chr5B 89.738 916 75 8 892 1797 380272823 380273729 0.000000e+00 1153.0
59 TraesCS7A01G320000 chr4B 88.441 917 88 8 892 1797 208678287 208679196 0.000000e+00 1090.0
60 TraesCS7A01G320000 chr6D 82.265 671 68 24 5325 5987 41540586 41539959 3.180000e-147 532.0
61 TraesCS7A01G320000 chr6D 82.746 568 69 22 5320 5877 59176130 59176678 4.200000e-131 479.0
62 TraesCS7A01G320000 chr6D 84.013 319 25 11 5672 5987 49868233 49868528 3.530000e-72 283.0
63 TraesCS7A01G320000 chr6D 97.500 40 0 1 58 96 450138076 450138115 3.870000e-07 67.6
64 TraesCS7A01G320000 chr4D 83.962 530 71 11 5353 5876 134665605 134665084 4.170000e-136 496.0
65 TraesCS7A01G320000 chr4D 80.690 580 71 16 5414 5986 44835400 44834855 4.320000e-111 412.0
66 TraesCS7A01G320000 chr4D 83.226 310 31 8 5666 5972 69219558 69219849 1.280000e-66 265.0
67 TraesCS7A01G320000 chr4A 82.918 562 60 18 5415 5972 12458228 12458757 1.950000e-129 473.0
68 TraesCS7A01G320000 chr4A 100.000 50 0 0 1 50 614612318 614612269 6.390000e-15 93.5
69 TraesCS7A01G320000 chr2B 81.047 554 78 22 5330 5877 675505823 675506355 3.340000e-112 416.0
70 TraesCS7A01G320000 chr2B 97.674 43 0 1 58 99 784978432 784978474 8.320000e-09 73.1
71 TraesCS7A01G320000 chr2B 95.349 43 1 1 58 99 64232566 64232608 3.870000e-07 67.6
72 TraesCS7A01G320000 chr2B 93.023 43 2 1 58 99 64608665 64608623 1.800000e-05 62.1
73 TraesCS7A01G320000 chr2B 93.023 43 2 1 58 99 64662642 64662684 1.800000e-05 62.1
74 TraesCS7A01G320000 chr2B 93.023 43 2 1 58 99 64689775 64689733 1.800000e-05 62.1
75 TraesCS7A01G320000 chr2B 92.500 40 2 1 61 99 63841490 63841451 8.380000e-04 56.5
76 TraesCS7A01G320000 chr1B 78.498 293 31 18 5702 5967 24806657 24806944 4.800000e-36 163.0
77 TraesCS7A01G320000 chr1B 94.737 38 1 1 58 94 624694443 624694480 2.330000e-04 58.4
78 TraesCS7A01G320000 chr2A 79.464 224 22 9 5746 5969 385453231 385453430 2.910000e-28 137.0
79 TraesCS7A01G320000 chr2A 94.595 37 1 1 58 93 655280396 655280432 8.380000e-04 56.5
80 TraesCS7A01G320000 chr1A 100.000 51 0 0 1 51 504584745 504584795 1.780000e-15 95.3
81 TraesCS7A01G320000 chrUn 93.023 43 2 1 58 99 17536178 17536220 1.800000e-05 62.1
82 TraesCS7A01G320000 chr6B 94.872 39 2 0 96 134 221810340 221810378 1.800000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G320000 chr7A 461803357 461809343 5986 False 11057.000000 11057 100.000000 1 5987 1 chr7A.!!$F1 5986
1 TraesCS7A01G320000 chr7A 462338974 462343459 4485 False 422.340000 1391 81.472000 1356 4979 5 chr7A.!!$F2 3623
2 TraesCS7A01G320000 chr7B 412768434 412773520 5086 False 3712.000000 6591 91.073500 135 5040 2 chr7B.!!$F3 4905
3 TraesCS7A01G320000 chr7B 209841904 209842812 908 False 1177.000000 1177 90.185000 892 1797 1 chr7B.!!$F1 905
4 TraesCS7A01G320000 chr7B 413106497 413110786 4289 False 509.750000 1367 80.508750 1502 4979 4 chr7B.!!$F4 3477
5 TraesCS7A01G320000 chr7D 403092219 403097467 5248 False 1896.275000 5029 90.020500 135 5138 4 chr7D.!!$F1 5003
6 TraesCS7A01G320000 chr7D 403780739 403785170 4431 False 386.960000 1358 82.495400 1356 4979 5 chr7D.!!$F2 3623
7 TraesCS7A01G320000 chr3B 567003034 567007040 4006 False 1432.333333 2307 86.009333 1101 4990 3 chr3B.!!$F4 3889
8 TraesCS7A01G320000 chr3B 126557512 126558419 907 False 1199.000000 1199 90.611000 892 1797 1 chr3B.!!$F1 905
9 TraesCS7A01G320000 chr3D 433804398 433808405 4007 False 2065.500000 2230 86.515500 1101 5014 2 chr3D.!!$F1 3913
10 TraesCS7A01G320000 chr3D 504420395 504421013 618 True 479.000000 479 80.982000 5325 5967 1 chr3D.!!$R1 642
11 TraesCS7A01G320000 chr3A 572446452 572450599 4147 False 2162.500000 2204 86.733000 892 4992 2 chr3A.!!$F2 4100
12 TraesCS7A01G320000 chr3A 238346920 238347824 904 True 1158.000000 1158 89.912000 896 1797 1 chr3A.!!$R2 901
13 TraesCS7A01G320000 chr5A 398255751 398256312 561 False 514.000000 514 83.566000 5320 5877 1 chr5A.!!$F1 557
14 TraesCS7A01G320000 chr5A 503497930 503504724 6794 True 450.650000 1351 84.568500 1358 4983 4 chr5A.!!$R1 3625
15 TraesCS7A01G320000 chr2D 43859679 43860584 905 True 1238.000000 1238 91.457000 895 1797 1 chr2D.!!$R2 902
16 TraesCS7A01G320000 chr2D 14346904 14347484 580 True 503.000000 503 82.910000 5325 5894 1 chr2D.!!$R1 569
17 TraesCS7A01G320000 chr2D 630084889 630085433 544 False 479.000000 479 82.923000 5414 5969 1 chr2D.!!$F2 555
18 TraesCS7A01G320000 chr2D 569681614 569682259 645 True 472.000000 472 80.769000 5325 5969 1 chr2D.!!$R5 644
19 TraesCS7A01G320000 chr5D 152524699 152525602 903 False 1173.000000 1173 90.175000 892 1797 1 chr5D.!!$F1 905
20 TraesCS7A01G320000 chr5B 380272823 380273729 906 False 1153.000000 1153 89.738000 892 1797 1 chr5B.!!$F1 905
21 TraesCS7A01G320000 chr4B 208678287 208679196 909 False 1090.000000 1090 88.441000 892 1797 1 chr4B.!!$F1 905
22 TraesCS7A01G320000 chr6D 41539959 41540586 627 True 532.000000 532 82.265000 5325 5987 1 chr6D.!!$R1 662
23 TraesCS7A01G320000 chr6D 59176130 59176678 548 False 479.000000 479 82.746000 5320 5877 1 chr6D.!!$F2 557
24 TraesCS7A01G320000 chr4D 134665084 134665605 521 True 496.000000 496 83.962000 5353 5876 1 chr4D.!!$R2 523
25 TraesCS7A01G320000 chr4D 44834855 44835400 545 True 412.000000 412 80.690000 5414 5986 1 chr4D.!!$R1 572
26 TraesCS7A01G320000 chr4A 12458228 12458757 529 False 473.000000 473 82.918000 5415 5972 1 chr4A.!!$F1 557
27 TraesCS7A01G320000 chr2B 675505823 675506355 532 False 416.000000 416 81.047000 5330 5877 1 chr2B.!!$F3 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
73 74 0.104671 GGAGTGGATGAGCTCTCAGC 59.895 60.000 16.19 6.60 43.61 4.26 F
84 85 0.108709 GCTCTCAGCTCAGTGGTCAG 60.109 60.000 0.00 0.00 38.45 3.51 F
517 563 0.178767 TCCACGCAGCTGAGCATATT 59.821 50.000 20.43 0.00 0.00 1.28 F
2277 3145 0.036105 TGCCACATGAGCGATTCAGT 60.036 50.000 0.00 0.00 39.68 3.41 F
2552 3447 1.267532 GCTTGATGCGATGTGGTAACG 60.268 52.381 0.00 0.00 42.51 3.18 F
3766 8492 1.377366 CTACTCCTCCTTCGCGCTGA 61.377 60.000 5.56 1.08 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1476 1794 1.202371 GGCCATGCATGAATGTCACAG 60.202 52.381 28.31 8.75 0.00 3.66 R
2038 2809 1.999048 TGTTACCGGCGACAACTATG 58.001 50.000 9.30 0.00 0.00 2.23 R
2445 3340 1.636988 CCACGGAATTCTACACGGAC 58.363 55.000 5.23 0.00 0.00 4.79 R
3741 8467 2.093106 GCGAAGGAGGAGTAGAAGTGA 58.907 52.381 0.00 0.00 0.00 3.41 R
4350 9079 0.179048 CGGCCATGATGGACTTGCTA 60.179 55.000 17.22 0.00 45.79 3.49 R
5653 10450 0.110823 CGCTAAAGCACAACCGTGTC 60.111 55.000 2.44 0.00 45.50 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 3.866582 GGGGCGAGGGAGTGGATG 61.867 72.222 0.00 0.00 0.00 3.51
64 65 2.764128 GGGCGAGGGAGTGGATGA 60.764 66.667 0.00 0.00 0.00 2.92
65 66 2.801631 GGGCGAGGGAGTGGATGAG 61.802 68.421 0.00 0.00 0.00 2.90
66 67 2.107953 GCGAGGGAGTGGATGAGC 59.892 66.667 0.00 0.00 0.00 4.26
67 68 2.430610 GCGAGGGAGTGGATGAGCT 61.431 63.158 0.00 0.00 0.00 4.09
68 69 1.739049 CGAGGGAGTGGATGAGCTC 59.261 63.158 6.82 6.82 0.00 4.09
69 70 0.754957 CGAGGGAGTGGATGAGCTCT 60.755 60.000 16.19 0.00 32.67 4.09
70 71 1.039856 GAGGGAGTGGATGAGCTCTC 58.960 60.000 16.19 9.73 32.61 3.20
71 72 0.337773 AGGGAGTGGATGAGCTCTCA 59.662 55.000 16.19 8.01 44.59 3.27
72 73 0.752054 GGGAGTGGATGAGCTCTCAG 59.248 60.000 16.19 0.00 43.61 3.35
73 74 0.104671 GGAGTGGATGAGCTCTCAGC 59.895 60.000 16.19 6.60 43.61 4.26
82 83 4.908790 GCTCTCAGCTCAGTGGTC 57.091 61.111 0.00 0.00 38.45 4.02
83 84 1.970639 GCTCTCAGCTCAGTGGTCA 59.029 57.895 0.00 0.00 38.45 4.02
84 85 0.108709 GCTCTCAGCTCAGTGGTCAG 60.109 60.000 0.00 0.00 38.45 3.51
85 86 0.531657 CTCTCAGCTCAGTGGTCAGG 59.468 60.000 0.00 0.00 0.00 3.86
86 87 0.902048 TCTCAGCTCAGTGGTCAGGG 60.902 60.000 0.00 0.00 0.00 4.45
87 88 1.897225 CTCAGCTCAGTGGTCAGGGG 61.897 65.000 0.00 0.00 0.00 4.79
88 89 3.325753 AGCTCAGTGGTCAGGGGC 61.326 66.667 0.00 0.00 0.00 5.80
89 90 3.640407 GCTCAGTGGTCAGGGGCA 61.640 66.667 0.00 0.00 0.00 5.36
90 91 2.667418 CTCAGTGGTCAGGGGCAG 59.333 66.667 0.00 0.00 0.00 4.85
91 92 2.122413 TCAGTGGTCAGGGGCAGT 60.122 61.111 0.00 0.00 0.00 4.40
92 93 2.033141 CAGTGGTCAGGGGCAGTG 59.967 66.667 0.00 0.00 0.00 3.66
93 94 3.958860 AGTGGTCAGGGGCAGTGC 61.959 66.667 6.55 6.55 0.00 4.40
94 95 3.958860 GTGGTCAGGGGCAGTGCT 61.959 66.667 16.11 0.00 0.00 4.40
95 96 3.177884 TGGTCAGGGGCAGTGCTT 61.178 61.111 16.11 0.00 0.00 3.91
96 97 2.360475 GGTCAGGGGCAGTGCTTC 60.360 66.667 16.11 7.74 0.00 3.86
97 98 2.360475 GTCAGGGGCAGTGCTTCC 60.360 66.667 16.11 16.45 0.00 3.46
98 99 2.530151 TCAGGGGCAGTGCTTCCT 60.530 61.111 19.89 19.89 34.06 3.36
99 100 2.156098 TCAGGGGCAGTGCTTCCTT 61.156 57.895 22.04 8.26 32.28 3.36
100 101 1.676967 CAGGGGCAGTGCTTCCTTC 60.677 63.158 22.04 3.42 32.28 3.46
101 102 1.849823 AGGGGCAGTGCTTCCTTCT 60.850 57.895 19.89 4.56 31.06 2.85
102 103 1.676967 GGGGCAGTGCTTCCTTCTG 60.677 63.158 16.11 0.00 0.00 3.02
103 104 1.073897 GGGCAGTGCTTCCTTCTGT 59.926 57.895 16.11 0.00 0.00 3.41
104 105 0.324943 GGGCAGTGCTTCCTTCTGTA 59.675 55.000 16.11 0.00 0.00 2.74
105 106 1.271379 GGGCAGTGCTTCCTTCTGTAA 60.271 52.381 16.11 0.00 0.00 2.41
106 107 2.504367 GGCAGTGCTTCCTTCTGTAAA 58.496 47.619 16.11 0.00 0.00 2.01
107 108 2.226674 GGCAGTGCTTCCTTCTGTAAAC 59.773 50.000 16.11 0.00 0.00 2.01
108 109 3.142174 GCAGTGCTTCCTTCTGTAAACT 58.858 45.455 8.18 0.00 0.00 2.66
109 110 3.058639 GCAGTGCTTCCTTCTGTAAACTG 60.059 47.826 8.18 0.00 37.45 3.16
110 111 4.380531 CAGTGCTTCCTTCTGTAAACTGA 58.619 43.478 0.00 0.00 36.71 3.41
111 112 4.999950 CAGTGCTTCCTTCTGTAAACTGAT 59.000 41.667 0.00 0.00 36.71 2.90
112 113 6.166279 CAGTGCTTCCTTCTGTAAACTGATA 58.834 40.000 0.00 0.00 36.71 2.15
113 114 6.820656 CAGTGCTTCCTTCTGTAAACTGATAT 59.179 38.462 0.00 0.00 36.71 1.63
114 115 7.981789 CAGTGCTTCCTTCTGTAAACTGATATA 59.018 37.037 0.00 0.00 36.71 0.86
115 116 8.540388 AGTGCTTCCTTCTGTAAACTGATATAA 58.460 33.333 0.00 0.00 0.00 0.98
116 117 8.821894 GTGCTTCCTTCTGTAAACTGATATAAG 58.178 37.037 0.00 0.00 0.00 1.73
117 118 8.758829 TGCTTCCTTCTGTAAACTGATATAAGA 58.241 33.333 0.00 0.00 0.00 2.10
118 119 9.771534 GCTTCCTTCTGTAAACTGATATAAGAT 57.228 33.333 0.00 0.00 0.00 2.40
120 121 9.967346 TTCCTTCTGTAAACTGATATAAGATCG 57.033 33.333 0.00 0.00 0.00 3.69
121 122 9.132923 TCCTTCTGTAAACTGATATAAGATCGT 57.867 33.333 0.00 0.00 0.00 3.73
122 123 9.751542 CCTTCTGTAAACTGATATAAGATCGTT 57.248 33.333 0.00 0.00 0.00 3.85
148 149 9.529325 TTAGATCACTACCAAACTAATTCATCG 57.471 33.333 0.00 0.00 0.00 3.84
157 158 6.030228 CCAAACTAATTCATCGAAAAGCCTC 58.970 40.000 0.00 0.00 0.00 4.70
161 162 6.612306 ACTAATTCATCGAAAAGCCTCAAAC 58.388 36.000 0.00 0.00 0.00 2.93
175 176 9.750125 AAAAGCCTCAAACTTTTCAACTATAAG 57.250 29.630 0.00 0.00 42.22 1.73
237 274 4.270008 ACATTACACTAATTCAGCACCCC 58.730 43.478 0.00 0.00 0.00 4.95
260 298 3.002759 GGCTGCTATTTCTGATTTCCGAC 59.997 47.826 0.00 0.00 0.00 4.79
271 309 1.730612 GATTTCCGACGGAACAAGTCC 59.269 52.381 28.45 10.37 41.87 3.85
430 476 5.006153 TCCGAAAAGATTTATGAGCGAGA 57.994 39.130 0.00 0.00 0.00 4.04
448 494 2.907897 GAATCGTGACCGGGGAGCAG 62.908 65.000 6.32 0.00 33.95 4.24
455 501 3.470888 CCGGGGAGCAGGAATCGT 61.471 66.667 0.00 0.00 0.00 3.73
472 518 5.107453 GGAATCGTATATTCAACAGCTTCCG 60.107 44.000 0.00 0.00 0.00 4.30
479 525 3.044305 AACAGCTTCCGCGACTGC 61.044 61.111 8.23 8.51 42.32 4.40
506 552 1.787847 CGCCTACTTTTCCACGCAG 59.212 57.895 0.00 0.00 0.00 5.18
517 563 0.178767 TCCACGCAGCTGAGCATATT 59.821 50.000 20.43 0.00 0.00 1.28
599 645 0.601558 CGTCTTCGTCCCCTTCTTGA 59.398 55.000 0.00 0.00 0.00 3.02
630 676 2.581216 TATAGACAGCTACCTCGGGG 57.419 55.000 0.00 0.00 38.88 5.73
708 757 4.055820 TCTTCTCCTCCTCCTATGTAGGT 58.944 47.826 6.01 0.00 44.02 3.08
721 787 3.983044 ATGTAGGTGGTTCTCTTGGTC 57.017 47.619 0.00 0.00 0.00 4.02
727 793 2.879026 GGTGGTTCTCTTGGTCTGTTTC 59.121 50.000 0.00 0.00 0.00 2.78
740 806 5.868454 TGGTCTGTTTCAAATCTGATGAGA 58.132 37.500 0.00 0.00 0.00 3.27
744 810 7.040823 GGTCTGTTTCAAATCTGATGAGAAGTT 60.041 37.037 0.00 0.00 0.00 2.66
746 815 7.716560 TCTGTTTCAAATCTGATGAGAAGTTCA 59.283 33.333 5.50 0.00 40.85 3.18
769 846 6.663523 TCAGTTCTTCTGACCATGTGTATCTA 59.336 38.462 0.00 0.00 46.77 1.98
770 847 6.754209 CAGTTCTTCTGACCATGTGTATCTAC 59.246 42.308 0.00 0.00 46.27 2.59
790 867 2.691011 ACTCCAGTCGAATTAGCTCCTC 59.309 50.000 0.00 0.00 0.00 3.71
797 874 1.802069 GAATTAGCTCCTCCATCGGC 58.198 55.000 0.00 0.00 0.00 5.54
819 896 3.988976 TCTGAAGATGGGAAGTTCAGG 57.011 47.619 5.01 0.00 44.87 3.86
832 909 1.032014 GTTCAGGGTTTGAGCAAGCA 58.968 50.000 0.00 0.00 37.04 3.91
839 916 2.029918 GGGTTTGAGCAAGCAAAGGTAG 60.030 50.000 0.00 0.00 38.33 3.18
880 957 4.082125 TCCTTCCATTTCTTTGGCTTCTC 58.918 43.478 0.00 0.00 36.66 2.87
881 958 3.828451 CCTTCCATTTCTTTGGCTTCTCA 59.172 43.478 0.00 0.00 36.66 3.27
884 961 6.423776 TTCCATTTCTTTGGCTTCTCATTT 57.576 33.333 0.00 0.00 36.66 2.32
885 962 6.029346 TCCATTTCTTTGGCTTCTCATTTC 57.971 37.500 0.00 0.00 36.66 2.17
887 964 5.867716 CCATTTCTTTGGCTTCTCATTTCTG 59.132 40.000 0.00 0.00 0.00 3.02
889 966 5.443185 TTCTTTGGCTTCTCATTTCTGTG 57.557 39.130 0.00 0.00 0.00 3.66
893 1130 4.025040 TGGCTTCTCATTTCTGTGATGT 57.975 40.909 0.00 0.00 0.00 3.06
919 1156 2.035066 ACATGGTTGTTCTTGCTTCAGC 59.965 45.455 0.00 0.00 35.27 4.26
1021 1262 2.635714 TGCTTAGCATGACCACTGATG 58.364 47.619 1.39 0.00 31.71 3.07
1048 1289 4.520111 TGACAATTGTAAGCAAGCATGTCT 59.480 37.500 11.95 0.00 41.70 3.41
1049 1290 4.801891 ACAATTGTAAGCAAGCATGTCTG 58.198 39.130 9.97 0.00 38.10 3.51
1050 1291 4.279169 ACAATTGTAAGCAAGCATGTCTGT 59.721 37.500 9.97 0.00 38.10 3.41
1051 1292 4.691860 ATTGTAAGCAAGCATGTCTGTC 57.308 40.909 0.00 0.00 38.10 3.51
1098 1339 2.423185 TGCATTTAGAACCAAGGATGCG 59.577 45.455 0.00 0.00 41.93 4.73
1131 1380 3.836949 CAACATAAACACTGACCATGGC 58.163 45.455 13.04 5.35 0.00 4.40
1299 1552 7.661536 AATTATTCTGCCTAGTCAGTACTCA 57.338 36.000 0.00 0.00 37.15 3.41
1300 1553 7.661536 ATTATTCTGCCTAGTCAGTACTCAA 57.338 36.000 0.00 0.00 37.15 3.02
1301 1554 7.661536 TTATTCTGCCTAGTCAGTACTCAAT 57.338 36.000 0.00 0.00 37.15 2.57
1324 1577 4.144297 AGTAGCCAGTGAAATTGCTGAAA 58.856 39.130 0.00 0.00 35.34 2.69
1326 1579 3.721035 AGCCAGTGAAATTGCTGAAAAC 58.279 40.909 0.00 0.00 34.87 2.43
1329 1582 4.025480 GCCAGTGAAATTGCTGAAAACTTG 60.025 41.667 0.00 0.00 34.87 3.16
1332 1585 6.237915 CCAGTGAAATTGCTGAAAACTTGTTC 60.238 38.462 0.00 0.00 34.87 3.18
1348 1612 2.912771 TGTTCTCTTGTTTCGCCAAGA 58.087 42.857 10.30 10.30 46.43 3.02
1476 1794 0.312102 GAGACTTGCCTTGGTTGTGC 59.688 55.000 0.00 0.00 0.00 4.57
1642 2297 5.220892 GGATATACGAAGAGAAGCCTATCCG 60.221 48.000 0.00 0.00 0.00 4.18
1696 2352 4.790140 CACTTGCTTTCATTAGTCGCAATC 59.210 41.667 0.00 0.00 39.52 2.67
1735 2425 6.349860 GGAAAAACGTCTTATATTGCCCACTT 60.350 38.462 0.00 0.00 0.00 3.16
1836 2526 5.489792 TCTCCTCAAGTAAGCAGTGAAAT 57.510 39.130 0.00 0.00 0.00 2.17
2038 2809 4.222145 TGGTACATTCCTTACCTGACAGAC 59.778 45.833 3.32 0.00 39.94 3.51
2100 2953 8.342270 TCTGGTAGAACCTACTAACCTTCTATT 58.658 37.037 4.40 0.00 39.58 1.73
2239 3093 8.339714 TCACTTTTACGGTACATTTTCTTCTTG 58.660 33.333 0.00 0.00 0.00 3.02
2269 3134 2.953466 ACAAATGATGCCACATGAGC 57.047 45.000 0.00 2.13 0.00 4.26
2277 3145 0.036105 TGCCACATGAGCGATTCAGT 60.036 50.000 0.00 0.00 39.68 3.41
2282 3150 4.682787 CCACATGAGCGATTCAGTACTTA 58.317 43.478 0.00 0.00 39.68 2.24
2418 3307 3.815401 ACAGACACAACATCTTTGTAGCC 59.185 43.478 0.00 0.00 34.06 3.93
2437 3328 5.921962 AGCCAGGATTTGACCTTAATTTC 57.078 39.130 0.00 0.00 38.32 2.17
2439 3330 4.466015 GCCAGGATTTGACCTTAATTTCCA 59.534 41.667 0.00 0.00 38.32 3.53
2445 3340 6.751888 GGATTTGACCTTAATTTCCATGTTCG 59.248 38.462 0.00 0.00 0.00 3.95
2495 3390 1.909302 AGAACTGACGGGGAATCACAT 59.091 47.619 0.00 0.00 0.00 3.21
2552 3447 1.267532 GCTTGATGCGATGTGGTAACG 60.268 52.381 0.00 0.00 42.51 3.18
2579 3497 4.514441 AGCAAACTCTCTGACAATGACAAG 59.486 41.667 0.00 0.00 0.00 3.16
2813 6550 4.099419 GTCAAGAAACATGGTTCCTTTGGT 59.901 41.667 19.90 0.00 0.00 3.67
3015 7004 2.275748 TCGGCCTGGATCGAGACT 59.724 61.111 6.27 0.00 0.00 3.24
3117 7108 8.951787 ATCTCTCTGAAGATTGAGATTTCTTG 57.048 34.615 6.35 0.00 41.74 3.02
3288 7309 9.319143 CCATTAAACCGCCAAATTATTGAATTA 57.681 29.630 0.00 0.00 38.94 1.40
3766 8492 1.377366 CTACTCCTCCTTCGCGCTGA 61.377 60.000 5.56 1.08 0.00 4.26
5036 9779 2.414138 CCCTGAAACATTCCGTCGTAAC 59.586 50.000 0.00 0.00 0.00 2.50
5052 9795 5.491973 GTCGTAACGTCTAGACAATCTCTC 58.508 45.833 22.37 4.55 34.09 3.20
5058 9801 5.116180 ACGTCTAGACAATCTCTCAGAGAG 58.884 45.833 22.37 20.25 42.26 3.20
5075 9818 3.133721 AGAGAGGCGTCTTGATAAAGCAT 59.866 43.478 10.79 0.00 30.97 3.79
5084 9827 4.034510 GTCTTGATAAAGCATTCCGTCTGG 59.965 45.833 0.00 0.00 0.00 3.86
5099 9842 3.565482 CCGTCTGGAATATCATTTGTGGG 59.435 47.826 0.00 0.00 37.49 4.61
5116 9859 4.661222 TGTGGGATCTTTTGATTAGCACA 58.339 39.130 0.00 0.00 39.67 4.57
5118 9861 5.716228 TGTGGGATCTTTTGATTAGCACAAT 59.284 36.000 0.00 0.00 39.67 2.71
5130 9873 8.746922 TTGATTAGCACAATTCTTAAAGCAAG 57.253 30.769 0.00 0.00 35.38 4.01
5138 9881 5.127682 ACAATTCTTAAAGCAAGCCTATGGG 59.872 40.000 0.00 0.00 33.94 4.00
5139 9882 3.297134 TCTTAAAGCAAGCCTATGGGG 57.703 47.619 0.00 0.00 33.94 4.96
5140 9883 2.849943 TCTTAAAGCAAGCCTATGGGGA 59.150 45.455 0.00 0.00 36.66 4.81
5141 9884 3.268334 TCTTAAAGCAAGCCTATGGGGAA 59.732 43.478 0.00 0.00 36.66 3.97
5142 9885 2.621556 AAAGCAAGCCTATGGGGAAA 57.378 45.000 0.00 0.00 37.23 3.13
5143 9886 2.854736 AAGCAAGCCTATGGGGAAAT 57.145 45.000 0.00 0.00 37.23 2.17
5144 9887 3.971468 AAGCAAGCCTATGGGGAAATA 57.029 42.857 0.00 0.00 37.23 1.40
5145 9888 4.475919 AAGCAAGCCTATGGGGAAATAT 57.524 40.909 0.00 0.00 37.23 1.28
5146 9889 5.599048 AAGCAAGCCTATGGGGAAATATA 57.401 39.130 0.00 0.00 37.23 0.86
5147 9890 4.923415 AGCAAGCCTATGGGGAAATATAC 58.077 43.478 0.00 0.00 37.23 1.47
5148 9891 3.689649 GCAAGCCTATGGGGAAATATACG 59.310 47.826 0.00 0.00 37.23 3.06
5149 9892 4.806286 GCAAGCCTATGGGGAAATATACGT 60.806 45.833 0.00 0.00 37.23 3.57
5150 9893 5.570034 GCAAGCCTATGGGGAAATATACGTA 60.570 44.000 0.00 0.00 37.23 3.57
5151 9894 6.469410 CAAGCCTATGGGGAAATATACGTAA 58.531 40.000 0.00 0.00 37.23 3.18
5152 9895 6.691255 AGCCTATGGGGAAATATACGTAAA 57.309 37.500 0.00 0.00 37.23 2.01
5153 9896 7.081857 AGCCTATGGGGAAATATACGTAAAA 57.918 36.000 0.00 0.00 37.23 1.52
5154 9897 7.519927 AGCCTATGGGGAAATATACGTAAAAA 58.480 34.615 0.00 0.00 37.23 1.94
5155 9898 7.664318 AGCCTATGGGGAAATATACGTAAAAAG 59.336 37.037 0.00 0.00 37.23 2.27
5156 9899 7.662669 GCCTATGGGGAAATATACGTAAAAAGA 59.337 37.037 0.00 0.00 37.23 2.52
5157 9900 8.996271 CCTATGGGGAAATATACGTAAAAAGAC 58.004 37.037 0.00 0.00 37.23 3.01
5158 9901 7.812690 ATGGGGAAATATACGTAAAAAGACC 57.187 36.000 0.00 0.00 0.00 3.85
5159 9902 6.719301 TGGGGAAATATACGTAAAAAGACCA 58.281 36.000 0.00 0.72 0.00 4.02
5160 9903 7.173722 TGGGGAAATATACGTAAAAAGACCAA 58.826 34.615 0.00 0.00 0.00 3.67
5161 9904 7.835181 TGGGGAAATATACGTAAAAAGACCAAT 59.165 33.333 0.00 0.00 0.00 3.16
5162 9905 9.341078 GGGGAAATATACGTAAAAAGACCAATA 57.659 33.333 0.00 0.00 0.00 1.90
5171 9914 8.260270 ACGTAAAAAGACCAATAATCCTACAC 57.740 34.615 0.00 0.00 0.00 2.90
5172 9915 8.098912 ACGTAAAAAGACCAATAATCCTACACT 58.901 33.333 0.00 0.00 0.00 3.55
5173 9916 8.601476 CGTAAAAAGACCAATAATCCTACACTC 58.399 37.037 0.00 0.00 0.00 3.51
5174 9917 9.444600 GTAAAAAGACCAATAATCCTACACTCA 57.555 33.333 0.00 0.00 0.00 3.41
5176 9919 8.511604 AAAAGACCAATAATCCTACACTCATG 57.488 34.615 0.00 0.00 0.00 3.07
5177 9920 6.179906 AGACCAATAATCCTACACTCATGG 57.820 41.667 0.00 0.00 0.00 3.66
5178 9921 5.072329 AGACCAATAATCCTACACTCATGGG 59.928 44.000 0.00 0.00 0.00 4.00
5179 9922 4.074970 CCAATAATCCTACACTCATGGGC 58.925 47.826 0.00 0.00 0.00 5.36
5180 9923 4.202503 CCAATAATCCTACACTCATGGGCT 60.203 45.833 0.00 0.00 0.00 5.19
5181 9924 4.630644 ATAATCCTACACTCATGGGCTG 57.369 45.455 0.00 0.00 0.00 4.85
5182 9925 1.885049 ATCCTACACTCATGGGCTGT 58.115 50.000 0.00 0.00 0.00 4.40
5183 9926 1.656587 TCCTACACTCATGGGCTGTT 58.343 50.000 6.19 0.00 0.00 3.16
5184 9927 1.985159 TCCTACACTCATGGGCTGTTT 59.015 47.619 6.19 0.00 0.00 2.83
5185 9928 3.178046 TCCTACACTCATGGGCTGTTTA 58.822 45.455 6.19 0.00 0.00 2.01
5186 9929 3.585289 TCCTACACTCATGGGCTGTTTAA 59.415 43.478 6.19 0.00 0.00 1.52
5187 9930 4.042311 TCCTACACTCATGGGCTGTTTAAA 59.958 41.667 6.19 0.00 0.00 1.52
5188 9931 4.396166 CCTACACTCATGGGCTGTTTAAAG 59.604 45.833 6.19 0.00 0.00 1.85
5189 9932 3.157087 ACACTCATGGGCTGTTTAAAGG 58.843 45.455 0.00 0.00 0.00 3.11
5190 9933 2.094545 CACTCATGGGCTGTTTAAAGGC 60.095 50.000 0.00 4.94 41.86 4.35
5191 9934 1.133025 CTCATGGGCTGTTTAAAGGCG 59.867 52.381 0.00 0.00 43.45 5.52
5192 9935 0.458370 CATGGGCTGTTTAAAGGCGC 60.458 55.000 17.43 17.43 43.45 6.53
5193 9936 0.611896 ATGGGCTGTTTAAAGGCGCT 60.612 50.000 21.72 11.07 43.45 5.92
5194 9937 0.825840 TGGGCTGTTTAAAGGCGCTT 60.826 50.000 21.72 0.00 43.45 4.68
5195 9938 0.317160 GGGCTGTTTAAAGGCGCTTT 59.683 50.000 7.64 1.79 43.45 3.51
5196 9939 1.542472 GGGCTGTTTAAAGGCGCTTTA 59.458 47.619 4.75 6.57 43.45 1.85
5197 9940 2.592194 GGCTGTTTAAAGGCGCTTTAC 58.408 47.619 4.75 0.37 35.94 2.01
5198 9941 2.030628 GGCTGTTTAAAGGCGCTTTACA 60.031 45.455 4.75 5.66 35.94 2.41
5199 9942 3.551250 GGCTGTTTAAAGGCGCTTTACAA 60.551 43.478 4.75 0.00 35.94 2.41
5200 9943 4.045783 GCTGTTTAAAGGCGCTTTACAAA 58.954 39.130 4.75 6.53 35.94 2.83
5201 9944 4.504826 GCTGTTTAAAGGCGCTTTACAAAA 59.495 37.500 4.75 4.32 35.94 2.44
5202 9945 5.555631 GCTGTTTAAAGGCGCTTTACAAAAC 60.556 40.000 20.91 20.91 35.94 2.43
5203 9946 4.804665 TGTTTAAAGGCGCTTTACAAAACC 59.195 37.500 22.96 11.22 35.94 3.27
5204 9947 4.922471 TTAAAGGCGCTTTACAAAACCT 57.078 36.364 4.75 0.00 35.94 3.50
5205 9948 3.812156 AAAGGCGCTTTACAAAACCTT 57.188 38.095 4.75 0.00 39.15 3.50
5206 9949 3.364889 AAGGCGCTTTACAAAACCTTC 57.635 42.857 7.64 0.00 32.04 3.46
5207 9950 1.611977 AGGCGCTTTACAAAACCTTCC 59.388 47.619 7.64 0.00 0.00 3.46
5208 9951 1.338655 GGCGCTTTACAAAACCTTCCA 59.661 47.619 7.64 0.00 0.00 3.53
5209 9952 2.223852 GGCGCTTTACAAAACCTTCCAA 60.224 45.455 7.64 0.00 0.00 3.53
5210 9953 3.554129 GGCGCTTTACAAAACCTTCCAAT 60.554 43.478 7.64 0.00 0.00 3.16
5211 9954 4.055360 GCGCTTTACAAAACCTTCCAATT 58.945 39.130 0.00 0.00 0.00 2.32
5212 9955 5.224135 GCGCTTTACAAAACCTTCCAATTA 58.776 37.500 0.00 0.00 0.00 1.40
5213 9956 5.692654 GCGCTTTACAAAACCTTCCAATTAA 59.307 36.000 0.00 0.00 0.00 1.40
5214 9957 6.367695 GCGCTTTACAAAACCTTCCAATTAAT 59.632 34.615 0.00 0.00 0.00 1.40
5215 9958 7.411480 GCGCTTTACAAAACCTTCCAATTAATC 60.411 37.037 0.00 0.00 0.00 1.75
5216 9959 7.812669 CGCTTTACAAAACCTTCCAATTAATCT 59.187 33.333 0.00 0.00 0.00 2.40
5217 9960 9.489084 GCTTTACAAAACCTTCCAATTAATCTT 57.511 29.630 0.00 0.00 0.00 2.40
5222 9965 9.710900 ACAAAACCTTCCAATTAATCTTCAATC 57.289 29.630 0.00 0.00 0.00 2.67
5223 9966 9.154847 CAAAACCTTCCAATTAATCTTCAATCC 57.845 33.333 0.00 0.00 0.00 3.01
5224 9967 7.423844 AACCTTCCAATTAATCTTCAATCCC 57.576 36.000 0.00 0.00 0.00 3.85
5225 9968 5.899547 ACCTTCCAATTAATCTTCAATCCCC 59.100 40.000 0.00 0.00 0.00 4.81
5226 9969 5.305386 CCTTCCAATTAATCTTCAATCCCCC 59.695 44.000 0.00 0.00 0.00 5.40
5227 9970 5.480058 TCCAATTAATCTTCAATCCCCCA 57.520 39.130 0.00 0.00 0.00 4.96
5228 9971 6.041910 TCCAATTAATCTTCAATCCCCCAT 57.958 37.500 0.00 0.00 0.00 4.00
5229 9972 6.451714 TCCAATTAATCTTCAATCCCCCATT 58.548 36.000 0.00 0.00 0.00 3.16
5230 9973 6.327104 TCCAATTAATCTTCAATCCCCCATTG 59.673 38.462 0.00 0.00 43.15 2.82
5239 9982 4.686891 TCAATCCCCCATTGAATTTCACT 58.313 39.130 0.00 0.00 46.68 3.41
5240 9983 4.467082 TCAATCCCCCATTGAATTTCACTG 59.533 41.667 9.20 9.20 46.68 3.66
5241 9984 2.818921 TCCCCCATTGAATTTCACTGG 58.181 47.619 22.55 22.55 44.15 4.00
5245 9988 3.598019 CCATTGAATTTCACTGGGGTG 57.402 47.619 22.02 3.13 41.77 4.61
5246 9989 2.234414 CCATTGAATTTCACTGGGGTGG 59.766 50.000 22.02 10.22 41.77 4.61
5247 9990 2.008242 TTGAATTTCACTGGGGTGGG 57.992 50.000 0.00 0.00 43.17 4.61
5248 9991 0.541764 TGAATTTCACTGGGGTGGGC 60.542 55.000 0.00 0.00 43.17 5.36
5249 9992 1.229177 AATTTCACTGGGGTGGGCC 60.229 57.895 0.00 0.00 43.17 5.80
5263 10006 2.941583 GGCCCCAACCCTCTTCCT 60.942 66.667 0.00 0.00 0.00 3.36
5264 10007 2.356667 GCCCCAACCCTCTTCCTG 59.643 66.667 0.00 0.00 0.00 3.86
5265 10008 2.539081 GCCCCAACCCTCTTCCTGT 61.539 63.158 0.00 0.00 0.00 4.00
5266 10009 1.685820 CCCCAACCCTCTTCCTGTC 59.314 63.158 0.00 0.00 0.00 3.51
5267 10010 0.842467 CCCCAACCCTCTTCCTGTCT 60.842 60.000 0.00 0.00 0.00 3.41
5268 10011 1.068121 CCCAACCCTCTTCCTGTCTT 58.932 55.000 0.00 0.00 0.00 3.01
5269 10012 1.003696 CCCAACCCTCTTCCTGTCTTC 59.996 57.143 0.00 0.00 0.00 2.87
5270 10013 1.003696 CCAACCCTCTTCCTGTCTTCC 59.996 57.143 0.00 0.00 0.00 3.46
5271 10014 0.977395 AACCCTCTTCCTGTCTTCCG 59.023 55.000 0.00 0.00 0.00 4.30
5272 10015 0.114560 ACCCTCTTCCTGTCTTCCGA 59.885 55.000 0.00 0.00 0.00 4.55
5273 10016 1.273324 ACCCTCTTCCTGTCTTCCGAT 60.273 52.381 0.00 0.00 0.00 4.18
5274 10017 1.410882 CCCTCTTCCTGTCTTCCGATC 59.589 57.143 0.00 0.00 0.00 3.69
5275 10018 1.066303 CCTCTTCCTGTCTTCCGATCG 59.934 57.143 8.51 8.51 0.00 3.69
5276 10019 1.746220 CTCTTCCTGTCTTCCGATCGT 59.254 52.381 15.09 0.00 0.00 3.73
5277 10020 2.164624 CTCTTCCTGTCTTCCGATCGTT 59.835 50.000 15.09 0.00 0.00 3.85
5278 10021 2.561419 TCTTCCTGTCTTCCGATCGTTT 59.439 45.455 15.09 0.00 0.00 3.60
5279 10022 3.006537 TCTTCCTGTCTTCCGATCGTTTT 59.993 43.478 15.09 0.00 0.00 2.43
5280 10023 2.683968 TCCTGTCTTCCGATCGTTTTG 58.316 47.619 15.09 0.00 0.00 2.44
5281 10024 2.036733 TCCTGTCTTCCGATCGTTTTGT 59.963 45.455 15.09 0.00 0.00 2.83
5282 10025 2.412089 CCTGTCTTCCGATCGTTTTGTC 59.588 50.000 15.09 0.79 0.00 3.18
5283 10026 2.409975 TGTCTTCCGATCGTTTTGTCC 58.590 47.619 15.09 0.00 0.00 4.02
5284 10027 1.730612 GTCTTCCGATCGTTTTGTCCC 59.269 52.381 15.09 0.00 0.00 4.46
5285 10028 0.719465 CTTCCGATCGTTTTGTCCCG 59.281 55.000 15.09 0.00 0.00 5.14
5286 10029 0.317799 TTCCGATCGTTTTGTCCCGA 59.682 50.000 15.09 0.00 37.51 5.14
5287 10030 0.317799 TCCGATCGTTTTGTCCCGAA 59.682 50.000 15.09 0.00 36.57 4.30
5288 10031 1.149987 CCGATCGTTTTGTCCCGAAA 58.850 50.000 15.09 0.00 36.57 3.46
5289 10032 1.127951 CCGATCGTTTTGTCCCGAAAG 59.872 52.381 15.09 0.00 36.57 2.62
5290 10033 1.463528 CGATCGTTTTGTCCCGAAAGC 60.464 52.381 7.03 0.00 36.57 3.51
5291 10034 1.533731 GATCGTTTTGTCCCGAAAGCA 59.466 47.619 0.00 0.00 36.57 3.91
5292 10035 1.380524 TCGTTTTGTCCCGAAAGCAA 58.619 45.000 0.00 0.00 0.00 3.91
5293 10036 1.064357 TCGTTTTGTCCCGAAAGCAAC 59.936 47.619 0.00 0.00 0.00 4.17
5294 10037 1.064952 CGTTTTGTCCCGAAAGCAACT 59.935 47.619 0.00 0.00 0.00 3.16
5295 10038 2.288458 CGTTTTGTCCCGAAAGCAACTA 59.712 45.455 0.00 0.00 0.00 2.24
5296 10039 3.606153 CGTTTTGTCCCGAAAGCAACTAG 60.606 47.826 0.00 0.00 0.00 2.57
5297 10040 2.922740 TTGTCCCGAAAGCAACTAGT 57.077 45.000 0.00 0.00 0.00 2.57
5298 10041 2.922740 TGTCCCGAAAGCAACTAGTT 57.077 45.000 1.12 1.12 0.00 2.24
5299 10042 4.339872 TTGTCCCGAAAGCAACTAGTTA 57.660 40.909 8.04 0.00 0.00 2.24
5300 10043 4.339872 TGTCCCGAAAGCAACTAGTTAA 57.660 40.909 8.04 0.00 0.00 2.01
5301 10044 4.060205 TGTCCCGAAAGCAACTAGTTAAC 58.940 43.478 8.04 3.72 0.00 2.01
5302 10045 3.122445 GTCCCGAAAGCAACTAGTTAACG 59.878 47.826 8.04 9.37 0.00 3.18
5303 10046 3.005684 TCCCGAAAGCAACTAGTTAACGA 59.994 43.478 8.04 0.00 0.00 3.85
5304 10047 3.367025 CCCGAAAGCAACTAGTTAACGAG 59.633 47.826 13.50 13.50 0.00 4.18
5305 10048 3.985925 CCGAAAGCAACTAGTTAACGAGT 59.014 43.478 14.80 14.80 33.17 4.18
5306 10049 4.143389 CCGAAAGCAACTAGTTAACGAGTG 60.143 45.833 20.22 15.02 32.16 3.51
5307 10050 4.663389 CGAAAGCAACTAGTTAACGAGTGC 60.663 45.833 20.22 21.84 32.16 4.40
5308 10051 3.662247 AGCAACTAGTTAACGAGTGCT 57.338 42.857 25.20 25.20 34.26 4.40
5309 10052 3.576648 AGCAACTAGTTAACGAGTGCTC 58.423 45.455 25.20 16.84 34.09 4.26
5310 10053 2.666994 GCAACTAGTTAACGAGTGCTCC 59.333 50.000 20.22 7.19 32.16 4.70
5311 10054 3.614390 GCAACTAGTTAACGAGTGCTCCT 60.614 47.826 20.22 3.49 32.16 3.69
5312 10055 4.557205 CAACTAGTTAACGAGTGCTCCTT 58.443 43.478 20.22 2.81 32.16 3.36
5313 10056 5.706916 CAACTAGTTAACGAGTGCTCCTTA 58.293 41.667 20.22 0.00 32.16 2.69
5314 10057 5.564048 ACTAGTTAACGAGTGCTCCTTAG 57.436 43.478 19.05 5.34 30.59 2.18
5315 10058 3.870633 AGTTAACGAGTGCTCCTTAGG 57.129 47.619 0.00 0.00 0.00 2.69
5316 10059 2.496470 AGTTAACGAGTGCTCCTTAGGG 59.504 50.000 0.00 0.00 0.00 3.53
5317 10060 2.226962 TAACGAGTGCTCCTTAGGGT 57.773 50.000 0.00 0.00 0.00 4.34
5318 10061 1.349067 AACGAGTGCTCCTTAGGGTT 58.651 50.000 0.00 0.00 0.00 4.11
5319 10062 0.896226 ACGAGTGCTCCTTAGGGTTC 59.104 55.000 0.00 0.00 0.00 3.62
5320 10063 1.187087 CGAGTGCTCCTTAGGGTTCT 58.813 55.000 0.00 0.00 0.00 3.01
5321 10064 1.135333 CGAGTGCTCCTTAGGGTTCTC 59.865 57.143 0.00 1.57 0.00 2.87
5322 10065 2.462723 GAGTGCTCCTTAGGGTTCTCT 58.537 52.381 0.00 0.00 0.00 3.10
5323 10066 3.633418 GAGTGCTCCTTAGGGTTCTCTA 58.367 50.000 0.00 0.00 0.00 2.43
5350 10093 3.381983 ATGTGTCGCGCTCTGGGA 61.382 61.111 5.56 0.00 37.17 4.37
5463 10230 7.116805 TCGGTCTTCCTTAACTTTTCGATAAAC 59.883 37.037 0.00 0.00 0.00 2.01
5547 10344 1.070786 TTTTGCTTCCGCGAGAGGT 59.929 52.632 8.23 0.00 39.65 3.85
5548 10345 0.319083 TTTTGCTTCCGCGAGAGGTA 59.681 50.000 8.23 0.00 39.65 3.08
5549 10346 0.389426 TTTGCTTCCGCGAGAGGTAC 60.389 55.000 8.23 0.00 39.65 3.34
5550 10347 2.278013 GCTTCCGCGAGAGGTACG 60.278 66.667 8.23 0.00 0.00 3.67
5552 10349 2.360350 TTCCGCGAGAGGTACGGT 60.360 61.111 8.23 0.00 46.92 4.83
5553 10350 1.930908 CTTCCGCGAGAGGTACGGTT 61.931 60.000 8.23 0.00 46.92 4.44
5554 10351 1.526575 TTCCGCGAGAGGTACGGTTT 61.527 55.000 8.23 0.00 46.92 3.27
5555 10352 1.080298 CCGCGAGAGGTACGGTTTT 60.080 57.895 8.23 0.00 42.01 2.43
5556 10353 1.349259 CCGCGAGAGGTACGGTTTTG 61.349 60.000 8.23 0.00 42.01 2.44
5557 10354 1.785951 GCGAGAGGTACGGTTTTGC 59.214 57.895 0.00 0.00 0.00 3.68
5558 10355 0.669625 GCGAGAGGTACGGTTTTGCT 60.670 55.000 0.00 0.00 0.00 3.91
5559 10356 1.792006 CGAGAGGTACGGTTTTGCTT 58.208 50.000 0.00 0.00 0.00 3.91
5560 10357 2.140717 CGAGAGGTACGGTTTTGCTTT 58.859 47.619 0.00 0.00 0.00 3.51
5561 10358 2.157085 CGAGAGGTACGGTTTTGCTTTC 59.843 50.000 0.00 0.00 0.00 2.62
5562 10359 2.140717 AGAGGTACGGTTTTGCTTTCG 58.859 47.619 0.00 0.00 0.00 3.46
5563 10360 1.869132 GAGGTACGGTTTTGCTTTCGT 59.131 47.619 0.00 0.00 39.30 3.85
5564 10361 1.600485 AGGTACGGTTTTGCTTTCGTG 59.400 47.619 0.00 0.00 37.10 4.35
5565 10362 1.598601 GGTACGGTTTTGCTTTCGTGA 59.401 47.619 0.00 0.00 37.10 4.35
5566 10363 2.349155 GGTACGGTTTTGCTTTCGTGAG 60.349 50.000 0.00 0.00 37.10 3.51
5567 10364 1.658994 ACGGTTTTGCTTTCGTGAGA 58.341 45.000 0.00 0.00 34.40 3.27
5568 10365 1.597663 ACGGTTTTGCTTTCGTGAGAG 59.402 47.619 0.00 0.00 43.69 3.20
5569 10366 1.597663 CGGTTTTGCTTTCGTGAGAGT 59.402 47.619 0.00 0.00 43.69 3.24
5570 10367 2.348591 CGGTTTTGCTTTCGTGAGAGTC 60.349 50.000 0.00 0.00 43.69 3.36
5571 10368 2.612212 GGTTTTGCTTTCGTGAGAGTCA 59.388 45.455 0.00 0.00 43.69 3.41
5572 10369 3.546218 GGTTTTGCTTTCGTGAGAGTCAC 60.546 47.826 0.00 0.00 43.65 3.67
5579 10376 4.192000 GTGAGAGTCACGGCCATG 57.808 61.111 2.24 0.00 37.67 3.66
5580 10377 1.448540 GTGAGAGTCACGGCCATGG 60.449 63.158 7.63 7.63 37.67 3.66
5581 10378 2.512515 GAGAGTCACGGCCATGGC 60.513 66.667 29.47 29.47 41.06 4.40
5582 10379 3.005539 AGAGTCACGGCCATGGCT 61.006 61.111 34.70 5.15 37.20 4.75
5583 10380 2.512515 GAGTCACGGCCATGGCTC 60.513 66.667 34.70 18.83 43.66 4.70
5584 10381 3.005539 AGTCACGGCCATGGCTCT 61.006 61.111 34.70 20.99 41.60 4.09
5585 10382 2.512515 GTCACGGCCATGGCTCTC 60.513 66.667 34.70 18.38 41.60 3.20
5586 10383 4.147449 TCACGGCCATGGCTCTCG 62.147 66.667 34.70 29.92 41.60 4.04
5589 10386 4.161295 CGGCCATGGCTCTCGGAA 62.161 66.667 34.70 0.00 41.60 4.30
5590 10387 2.272146 GGCCATGGCTCTCGGAAA 59.728 61.111 34.70 0.00 41.60 3.13
5591 10388 2.115291 GGCCATGGCTCTCGGAAAC 61.115 63.158 34.70 12.27 41.60 2.78
5592 10389 1.377202 GCCATGGCTCTCGGAAACA 60.377 57.895 29.98 0.00 38.26 2.83
5593 10390 1.372087 GCCATGGCTCTCGGAAACAG 61.372 60.000 29.98 0.00 38.26 3.16
5594 10391 0.250234 CCATGGCTCTCGGAAACAGA 59.750 55.000 0.00 0.00 0.00 3.41
5595 10392 1.339055 CCATGGCTCTCGGAAACAGAA 60.339 52.381 0.00 0.00 0.00 3.02
5596 10393 2.426522 CATGGCTCTCGGAAACAGAAA 58.573 47.619 0.00 0.00 0.00 2.52
5597 10394 2.631160 TGGCTCTCGGAAACAGAAAA 57.369 45.000 0.00 0.00 0.00 2.29
5598 10395 2.925724 TGGCTCTCGGAAACAGAAAAA 58.074 42.857 0.00 0.00 0.00 1.94
5635 10432 1.792006 TTTTCTTTCGCGAGAGTCCC 58.208 50.000 24.05 0.00 43.69 4.46
5636 10433 0.388134 TTTCTTTCGCGAGAGTCCCG 60.388 55.000 24.05 1.60 43.69 5.14
5637 10434 2.202623 CTTTCGCGAGAGTCCCGG 60.203 66.667 17.92 0.00 43.69 5.73
5638 10435 2.987547 TTTCGCGAGAGTCCCGGT 60.988 61.111 9.59 0.00 43.69 5.28
5639 10436 2.488087 CTTTCGCGAGAGTCCCGGTT 62.488 60.000 17.92 0.00 43.69 4.44
5640 10437 2.091102 TTTCGCGAGAGTCCCGGTTT 62.091 55.000 9.59 0.00 43.69 3.27
5641 10438 2.758770 TTCGCGAGAGTCCCGGTTTG 62.759 60.000 9.59 0.00 43.69 2.93
5642 10439 3.119096 GCGAGAGTCCCGGTTTGC 61.119 66.667 0.00 0.00 0.00 3.68
5643 10440 2.657237 CGAGAGTCCCGGTTTGCT 59.343 61.111 0.00 0.00 0.00 3.91
5644 10441 1.004918 CGAGAGTCCCGGTTTGCTT 60.005 57.895 0.00 0.00 0.00 3.91
5645 10442 1.014564 CGAGAGTCCCGGTTTGCTTC 61.015 60.000 0.00 0.00 0.00 3.86
5646 10443 0.673956 GAGAGTCCCGGTTTGCTTCC 60.674 60.000 0.00 0.00 0.00 3.46
5647 10444 2.032071 AGTCCCGGTTTGCTTCCG 59.968 61.111 0.00 7.58 46.49 4.30
5648 10445 3.733960 GTCCCGGTTTGCTTCCGC 61.734 66.667 0.00 0.00 45.71 5.54
5651 10448 3.788766 CCGGTTTGCTTCCGCGAG 61.789 66.667 8.23 0.00 45.71 5.03
5652 10449 2.736995 CGGTTTGCTTCCGCGAGA 60.737 61.111 8.23 0.00 41.48 4.04
5653 10450 2.730672 CGGTTTGCTTCCGCGAGAG 61.731 63.158 8.23 5.93 41.48 3.20
5654 10451 1.374252 GGTTTGCTTCCGCGAGAGA 60.374 57.895 8.23 0.00 39.65 3.10
5684 10481 0.171455 CTTTAGCGAGAGTCACGGCT 59.829 55.000 11.95 11.09 37.10 5.52
5744 10879 5.721876 TTTTTCTTTTGCGAGAGTAACGA 57.278 34.783 0.00 0.00 34.74 3.85
5781 10916 2.853457 CACAGTTGTGTTTTCGCGG 58.147 52.632 6.13 0.00 40.96 6.46
5807 10948 1.678970 GGCCGTGCCTCTTGGAAAT 60.679 57.895 7.58 0.00 46.69 2.17
5871 11016 3.795561 ACGATTTTGCTTTCGTGAGAG 57.204 42.857 0.00 0.00 46.03 3.20
5872 11017 2.480419 ACGATTTTGCTTTCGTGAGAGG 59.520 45.455 0.00 0.00 46.03 3.69
5873 11018 2.726066 CGATTTTGCTTTCGTGAGAGGC 60.726 50.000 0.00 0.00 43.69 4.70
5874 11019 1.674359 TTTTGCTTTCGTGAGAGGCA 58.326 45.000 0.00 0.00 44.45 4.75
5875 11020 0.944386 TTTGCTTTCGTGAGAGGCAC 59.056 50.000 0.00 0.00 45.26 5.01
5882 11027 3.159984 GTGAGAGGCACGCTTTCG 58.840 61.111 0.00 0.00 39.71 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.866582 CATCCACTCCCTCGCCCC 61.867 72.222 0.00 0.00 0.00 5.80
47 48 2.764128 TCATCCACTCCCTCGCCC 60.764 66.667 0.00 0.00 0.00 6.13
48 49 2.818132 CTCATCCACTCCCTCGCC 59.182 66.667 0.00 0.00 0.00 5.54
49 50 2.107953 GCTCATCCACTCCCTCGC 59.892 66.667 0.00 0.00 0.00 5.03
50 51 0.754957 AGAGCTCATCCACTCCCTCG 60.755 60.000 17.77 0.00 33.18 4.63
51 52 1.039856 GAGAGCTCATCCACTCCCTC 58.960 60.000 17.77 0.00 33.18 4.30
52 53 0.337773 TGAGAGCTCATCCACTCCCT 59.662 55.000 17.77 0.00 34.14 4.20
53 54 0.752054 CTGAGAGCTCATCCACTCCC 59.248 60.000 17.77 0.00 39.13 4.30
54 55 0.104671 GCTGAGAGCTCATCCACTCC 59.895 60.000 17.77 0.00 39.13 3.85
55 56 3.665544 GCTGAGAGCTCATCCACTC 57.334 57.895 17.77 3.83 39.13 3.51
65 66 0.108709 CTGACCACTGAGCTGAGAGC 60.109 60.000 7.36 0.00 42.84 4.09
66 67 0.531657 CCTGACCACTGAGCTGAGAG 59.468 60.000 7.36 0.00 0.00 3.20
67 68 0.902048 CCCTGACCACTGAGCTGAGA 60.902 60.000 7.36 0.00 0.00 3.27
68 69 1.595882 CCCTGACCACTGAGCTGAG 59.404 63.158 0.00 0.00 0.00 3.35
69 70 1.915266 CCCCTGACCACTGAGCTGA 60.915 63.158 0.00 0.00 0.00 4.26
70 71 2.667418 CCCCTGACCACTGAGCTG 59.333 66.667 0.00 0.00 0.00 4.24
71 72 3.325753 GCCCCTGACCACTGAGCT 61.326 66.667 0.00 0.00 0.00 4.09
72 73 3.618780 CTGCCCCTGACCACTGAGC 62.619 68.421 0.00 0.00 0.00 4.26
73 74 2.219875 ACTGCCCCTGACCACTGAG 61.220 63.158 0.00 0.00 0.00 3.35
74 75 2.122413 ACTGCCCCTGACCACTGA 60.122 61.111 0.00 0.00 0.00 3.41
75 76 2.033141 CACTGCCCCTGACCACTG 59.967 66.667 0.00 0.00 0.00 3.66
76 77 3.958860 GCACTGCCCCTGACCACT 61.959 66.667 0.00 0.00 0.00 4.00
77 78 3.497884 AAGCACTGCCCCTGACCAC 62.498 63.158 0.00 0.00 0.00 4.16
78 79 3.177884 AAGCACTGCCCCTGACCA 61.178 61.111 0.00 0.00 0.00 4.02
79 80 2.360475 GAAGCACTGCCCCTGACC 60.360 66.667 0.00 0.00 0.00 4.02
80 81 2.360475 GGAAGCACTGCCCCTGAC 60.360 66.667 0.00 0.00 0.00 3.51
81 82 2.129555 GAAGGAAGCACTGCCCCTGA 62.130 60.000 12.01 0.00 33.57 3.86
82 83 1.676967 GAAGGAAGCACTGCCCCTG 60.677 63.158 12.01 0.00 33.57 4.45
83 84 1.849823 AGAAGGAAGCACTGCCCCT 60.850 57.895 6.73 6.73 34.45 4.79
84 85 1.676967 CAGAAGGAAGCACTGCCCC 60.677 63.158 0.00 0.00 0.00 5.80
85 86 0.324943 TACAGAAGGAAGCACTGCCC 59.675 55.000 0.00 0.00 35.38 5.36
86 87 2.185004 TTACAGAAGGAAGCACTGCC 57.815 50.000 0.00 0.00 35.38 4.85
87 88 3.058639 CAGTTTACAGAAGGAAGCACTGC 60.059 47.826 0.00 0.00 35.38 4.40
88 89 4.380531 TCAGTTTACAGAAGGAAGCACTG 58.619 43.478 0.00 0.00 37.62 3.66
89 90 4.689612 TCAGTTTACAGAAGGAAGCACT 57.310 40.909 0.00 0.00 0.00 4.40
90 91 8.718102 TTATATCAGTTTACAGAAGGAAGCAC 57.282 34.615 0.00 0.00 0.00 4.40
91 92 8.758829 TCTTATATCAGTTTACAGAAGGAAGCA 58.241 33.333 0.00 0.00 0.00 3.91
92 93 9.771534 ATCTTATATCAGTTTACAGAAGGAAGC 57.228 33.333 0.00 0.00 0.00 3.86
94 95 9.967346 CGATCTTATATCAGTTTACAGAAGGAA 57.033 33.333 0.00 0.00 0.00 3.36
95 96 9.132923 ACGATCTTATATCAGTTTACAGAAGGA 57.867 33.333 0.00 0.00 0.00 3.36
96 97 9.751542 AACGATCTTATATCAGTTTACAGAAGG 57.248 33.333 0.00 0.00 0.00 3.46
117 118 9.886132 AATTAGTTTGGTAGTGATCTAAACGAT 57.114 29.630 0.00 0.00 39.83 3.73
118 119 9.362539 GAATTAGTTTGGTAGTGATCTAAACGA 57.637 33.333 0.00 0.00 39.83 3.85
119 120 9.146984 TGAATTAGTTTGGTAGTGATCTAAACG 57.853 33.333 0.00 0.00 39.83 3.60
122 123 9.529325 CGATGAATTAGTTTGGTAGTGATCTAA 57.471 33.333 0.00 0.00 0.00 2.10
123 124 8.909923 TCGATGAATTAGTTTGGTAGTGATCTA 58.090 33.333 0.00 0.00 0.00 1.98
124 125 7.782049 TCGATGAATTAGTTTGGTAGTGATCT 58.218 34.615 0.00 0.00 0.00 2.75
125 126 8.420374 TTCGATGAATTAGTTTGGTAGTGATC 57.580 34.615 0.00 0.00 0.00 2.92
126 127 8.786826 TTTCGATGAATTAGTTTGGTAGTGAT 57.213 30.769 0.00 0.00 0.00 3.06
127 128 8.610248 TTTTCGATGAATTAGTTTGGTAGTGA 57.390 30.769 0.00 0.00 0.00 3.41
128 129 7.481798 GCTTTTCGATGAATTAGTTTGGTAGTG 59.518 37.037 0.00 0.00 0.00 2.74
129 130 7.361799 GGCTTTTCGATGAATTAGTTTGGTAGT 60.362 37.037 0.00 0.00 0.00 2.73
130 131 6.967199 GGCTTTTCGATGAATTAGTTTGGTAG 59.033 38.462 0.00 0.00 0.00 3.18
131 132 6.657541 AGGCTTTTCGATGAATTAGTTTGGTA 59.342 34.615 0.00 0.00 0.00 3.25
132 133 5.476945 AGGCTTTTCGATGAATTAGTTTGGT 59.523 36.000 0.00 0.00 0.00 3.67
133 134 5.954335 AGGCTTTTCGATGAATTAGTTTGG 58.046 37.500 0.00 0.00 0.00 3.28
165 166 9.828039 TCTGACGAATAGACTACTTATAGTTGA 57.172 33.333 0.00 0.00 41.98 3.18
175 176 8.185505 ACAAATTCTCTCTGACGAATAGACTAC 58.814 37.037 0.00 0.00 30.19 2.73
219 221 1.208535 CCGGGGTGCTGAATTAGTGTA 59.791 52.381 0.00 0.00 0.00 2.90
237 274 2.032549 CGGAAATCAGAAATAGCAGCCG 60.033 50.000 0.00 0.00 0.00 5.52
271 309 0.232303 GACTGTCGCGTGGTTTCTTG 59.768 55.000 5.77 0.00 0.00 3.02
402 448 6.630443 CGCTCATAAATCTTTTCGGAGAATTG 59.370 38.462 0.00 0.00 45.90 2.32
430 476 3.000819 TGCTCCCCGGTCACGATT 61.001 61.111 0.00 0.00 44.60 3.34
448 494 5.107453 CGGAAGCTGTTGAATATACGATTCC 60.107 44.000 0.00 0.00 34.44 3.01
482 528 2.095843 GAAAAGTAGGCGCGCACG 59.904 61.111 34.42 0.00 44.07 5.34
487 533 2.240612 CTGCGTGGAAAAGTAGGCGC 62.241 60.000 0.00 0.00 44.29 6.53
506 552 6.967767 GCATCAGATATTCAAATATGCTCAGC 59.032 38.462 0.00 0.00 31.96 4.26
517 563 3.216800 GCTGGTGGCATCAGATATTCAA 58.783 45.455 31.13 0.00 41.35 2.69
599 645 7.666388 AGGTAGCTGTCTATATAACTCATTCGT 59.334 37.037 0.00 0.00 0.00 3.85
604 650 5.938710 CCGAGGTAGCTGTCTATATAACTCA 59.061 44.000 0.00 0.00 0.00 3.41
708 757 3.924114 TGAAACAGACCAAGAGAACCA 57.076 42.857 0.00 0.00 0.00 3.67
721 787 7.868775 TGAACTTCTCATCAGATTTGAAACAG 58.131 34.615 0.00 0.00 36.78 3.16
727 793 7.670009 AGAACTGAACTTCTCATCAGATTTG 57.330 36.000 9.56 0.00 44.64 2.32
746 815 6.665680 AGTAGATACACATGGTCAGAAGAACT 59.334 38.462 0.00 0.00 30.86 3.01
754 823 4.610333 ACTGGAGTAGATACACATGGTCA 58.390 43.478 0.00 0.00 0.00 4.02
755 824 4.261238 CGACTGGAGTAGATACACATGGTC 60.261 50.000 0.00 0.00 0.00 4.02
756 825 3.632604 CGACTGGAGTAGATACACATGGT 59.367 47.826 0.00 0.00 0.00 3.55
757 826 3.883489 TCGACTGGAGTAGATACACATGG 59.117 47.826 0.00 0.00 0.00 3.66
758 827 5.500645 TTCGACTGGAGTAGATACACATG 57.499 43.478 0.00 0.00 30.07 3.21
759 828 6.716934 AATTCGACTGGAGTAGATACACAT 57.283 37.500 0.00 0.00 30.07 3.21
761 830 6.016943 AGCTAATTCGACTGGAGTAGATACAC 60.017 42.308 0.00 0.00 30.07 2.90
769 846 2.691011 GAGGAGCTAATTCGACTGGAGT 59.309 50.000 0.00 0.00 0.00 3.85
770 847 2.035321 GGAGGAGCTAATTCGACTGGAG 59.965 54.545 0.00 0.00 0.00 3.86
790 867 1.590932 CCATCTTCAGAAGCCGATGG 58.409 55.000 13.07 13.07 44.71 3.51
797 874 4.260170 CCTGAACTTCCCATCTTCAGAAG 58.740 47.826 3.45 3.45 42.36 2.85
819 896 2.608016 GCTACCTTTGCTTGCTCAAACC 60.608 50.000 0.00 0.00 32.99 3.27
839 916 0.036022 AGCTGTTTCAGGTCAGGAGC 59.964 55.000 0.00 0.00 37.71 4.70
880 957 5.182570 ACCATGTCAGAACATCACAGAAATG 59.817 40.000 0.00 0.00 44.41 2.32
881 958 5.319453 ACCATGTCAGAACATCACAGAAAT 58.681 37.500 0.00 0.00 44.41 2.17
884 961 4.067192 CAACCATGTCAGAACATCACAGA 58.933 43.478 0.00 0.00 44.41 3.41
885 962 3.817084 ACAACCATGTCAGAACATCACAG 59.183 43.478 0.00 0.00 44.41 3.66
887 964 4.516698 AGAACAACCATGTCAGAACATCAC 59.483 41.667 0.00 0.00 44.41 3.06
889 966 5.455392 CAAGAACAACCATGTCAGAACATC 58.545 41.667 0.00 0.00 44.41 3.06
893 1130 3.554934 AGCAAGAACAACCATGTCAGAA 58.445 40.909 0.00 0.00 39.40 3.02
919 1156 1.591594 AGTCGACGTGCAAGTGTGG 60.592 57.895 10.87 0.04 0.00 4.17
944 1181 0.532115 CCAAGTTATTGCTGGTGGCC 59.468 55.000 0.00 0.00 40.92 5.36
1021 1262 4.858935 TGCTTGCTTACAATTGTCAAGAC 58.141 39.130 28.98 22.40 37.03 3.01
1049 1290 4.273148 AGAAAGGTACAGTCCATGTGAC 57.727 45.455 6.29 6.29 43.80 3.67
1050 1291 6.428083 TTTAGAAAGGTACAGTCCATGTGA 57.572 37.500 0.00 0.00 43.80 3.58
1051 1292 7.687941 AATTTAGAAAGGTACAGTCCATGTG 57.312 36.000 0.00 0.00 43.80 3.21
1098 1339 7.041644 TCAGTGTTTATGTTGCAAAGGTAGTAC 60.042 37.037 0.00 0.00 0.00 2.73
1186 1435 1.597663 CGACTCACTTGGTTTTTCGCT 59.402 47.619 0.00 0.00 0.00 4.93
1299 1552 5.500234 TCAGCAATTTCACTGGCTACTATT 58.500 37.500 0.00 0.00 34.25 1.73
1300 1553 5.102953 TCAGCAATTTCACTGGCTACTAT 57.897 39.130 0.00 0.00 34.25 2.12
1301 1554 4.551702 TCAGCAATTTCACTGGCTACTA 57.448 40.909 0.00 0.00 34.25 1.82
1324 1577 3.013921 TGGCGAAACAAGAGAACAAGTT 58.986 40.909 0.00 0.00 0.00 2.66
1326 1579 3.691049 TTGGCGAAACAAGAGAACAAG 57.309 42.857 0.00 0.00 0.00 3.16
1476 1794 1.202371 GGCCATGCATGAATGTCACAG 60.202 52.381 28.31 8.75 0.00 3.66
1642 2297 2.561478 TTACTGAGAACTGGTTGGGC 57.439 50.000 0.00 0.00 0.00 5.36
1686 2342 5.527214 CACCATAAATTGAGGATTGCGACTA 59.473 40.000 0.00 0.00 0.00 2.59
1690 2346 3.631686 TCCACCATAAATTGAGGATTGCG 59.368 43.478 0.00 0.00 0.00 4.85
1696 2352 5.778862 ACGTTTTTCCACCATAAATTGAGG 58.221 37.500 0.00 0.00 0.00 3.86
1735 2425 5.116180 CGAATGCCTAGACAGGTGAAAATA 58.884 41.667 0.00 0.00 44.68 1.40
1836 2526 5.241728 CGATATACAGGTGAGATTGTGAGGA 59.758 44.000 0.00 0.00 0.00 3.71
1845 2535 6.062095 TCAGATGAACGATATACAGGTGAGA 58.938 40.000 0.00 0.00 0.00 3.27
1909 2637 4.411013 GGCTTTATCTATTCCCCTGCAAT 58.589 43.478 0.00 0.00 0.00 3.56
2038 2809 1.999048 TGTTACCGGCGACAACTATG 58.001 50.000 9.30 0.00 0.00 2.23
2100 2953 3.613671 CGCCTACATTGCAATTGTGGAAA 60.614 43.478 9.83 0.00 38.70 3.13
2239 3093 4.691685 TGGCATCATTTGTTTGATTTGCTC 59.308 37.500 0.00 0.00 34.09 4.26
2269 3134 8.893727 AGGGATCAAAATTTAAGTACTGAATCG 58.106 33.333 0.00 0.00 0.00 3.34
2277 3145 8.469200 CAAGCATCAGGGATCAAAATTTAAGTA 58.531 33.333 0.00 0.00 0.00 2.24
2282 3150 4.020039 TGCAAGCATCAGGGATCAAAATTT 60.020 37.500 0.00 0.00 0.00 1.82
2336 3210 3.076621 TGTGAAGAGCAATGTGACATCC 58.923 45.455 0.00 0.00 0.00 3.51
2418 3307 7.174107 ACATGGAAATTAAGGTCAAATCCTG 57.826 36.000 0.00 0.00 37.93 3.86
2437 3328 2.357327 TTCTACACGGACGAACATGG 57.643 50.000 0.00 0.00 0.00 3.66
2439 3330 3.518590 GGAATTCTACACGGACGAACAT 58.481 45.455 5.23 0.00 0.00 2.71
2445 3340 1.636988 CCACGGAATTCTACACGGAC 58.363 55.000 5.23 0.00 0.00 4.79
2495 3390 5.462530 TCGTTACTTGATTCTGGAGTTGA 57.537 39.130 0.00 0.00 0.00 3.18
2552 3447 0.250467 TGTCAGAGAGTTTGCTGCCC 60.250 55.000 0.00 0.00 32.27 5.36
2579 3497 1.264288 CACGCAACAAGGAAGAAGACC 59.736 52.381 0.00 0.00 0.00 3.85
2759 6496 1.966451 GTCCTTGGCCGTGAACTGG 60.966 63.158 0.00 0.00 0.00 4.00
2847 6584 0.035458 CCAATAGACGATCCAGGCCC 59.965 60.000 0.00 0.00 0.00 5.80
3015 7004 2.664851 CAGTTGTTCTGCGGCGGA 60.665 61.111 9.78 7.57 37.36 5.54
3117 7108 4.783242 ACACGCAGACACAACAAATATTC 58.217 39.130 0.00 0.00 0.00 1.75
3288 7309 7.009179 TCTGTTCTGGAATCAAACTATGACT 57.991 36.000 0.00 0.00 41.93 3.41
3741 8467 2.093106 GCGAAGGAGGAGTAGAAGTGA 58.907 52.381 0.00 0.00 0.00 3.41
3862 8591 2.805353 CTTGCGTGGGACGTCGAG 60.805 66.667 9.92 1.71 44.73 4.04
4350 9079 0.179048 CGGCCATGATGGACTTGCTA 60.179 55.000 17.22 0.00 45.79 3.49
4546 9275 0.604780 CACACCTCCTTGGACTGCAG 60.605 60.000 13.48 13.48 39.71 4.41
5028 9771 4.032672 AGAGATTGTCTAGACGTTACGACG 59.967 45.833 17.85 0.14 44.07 5.12
5036 9779 4.511454 CCTCTCTGAGAGATTGTCTAGACG 59.489 50.000 31.14 9.86 45.07 4.18
5052 9795 2.863137 GCTTTATCAAGACGCCTCTCTG 59.137 50.000 0.00 0.00 30.57 3.35
5058 9801 2.286418 CGGAATGCTTTATCAAGACGCC 60.286 50.000 0.00 0.00 30.57 5.68
5116 9859 4.651045 CCCCATAGGCTTGCTTTAAGAATT 59.349 41.667 0.00 0.00 38.76 2.17
5118 9861 3.268334 TCCCCATAGGCTTGCTTTAAGAA 59.732 43.478 0.00 0.00 38.76 2.52
5130 9873 7.662669 TCTTTTTACGTATATTTCCCCATAGGC 59.337 37.037 0.00 0.00 34.51 3.93
5145 9888 9.369904 GTGTAGGATTATTGGTCTTTTTACGTA 57.630 33.333 0.00 0.00 0.00 3.57
5146 9889 8.098912 AGTGTAGGATTATTGGTCTTTTTACGT 58.901 33.333 0.00 0.00 0.00 3.57
5147 9890 8.488651 AGTGTAGGATTATTGGTCTTTTTACG 57.511 34.615 0.00 0.00 0.00 3.18
5148 9891 9.444600 TGAGTGTAGGATTATTGGTCTTTTTAC 57.555 33.333 0.00 0.00 0.00 2.01
5150 9893 8.960591 CATGAGTGTAGGATTATTGGTCTTTTT 58.039 33.333 0.00 0.00 0.00 1.94
5151 9894 7.557719 CCATGAGTGTAGGATTATTGGTCTTTT 59.442 37.037 0.00 0.00 0.00 2.27
5152 9895 7.056635 CCATGAGTGTAGGATTATTGGTCTTT 58.943 38.462 0.00 0.00 0.00 2.52
5153 9896 6.409695 CCCATGAGTGTAGGATTATTGGTCTT 60.410 42.308 0.00 0.00 0.00 3.01
5154 9897 5.072329 CCCATGAGTGTAGGATTATTGGTCT 59.928 44.000 0.00 0.00 0.00 3.85
5155 9898 5.308825 CCCATGAGTGTAGGATTATTGGTC 58.691 45.833 0.00 0.00 0.00 4.02
5156 9899 4.446311 GCCCATGAGTGTAGGATTATTGGT 60.446 45.833 0.00 0.00 0.00 3.67
5157 9900 4.074970 GCCCATGAGTGTAGGATTATTGG 58.925 47.826 0.00 0.00 0.00 3.16
5158 9901 4.758674 CAGCCCATGAGTGTAGGATTATTG 59.241 45.833 0.00 0.00 0.00 1.90
5159 9902 4.413520 ACAGCCCATGAGTGTAGGATTATT 59.586 41.667 0.00 0.00 0.00 1.40
5160 9903 3.976654 ACAGCCCATGAGTGTAGGATTAT 59.023 43.478 0.00 0.00 0.00 1.28
5161 9904 3.384168 ACAGCCCATGAGTGTAGGATTA 58.616 45.455 0.00 0.00 0.00 1.75
5162 9905 2.200081 ACAGCCCATGAGTGTAGGATT 58.800 47.619 0.00 0.00 0.00 3.01
5163 9906 1.885049 ACAGCCCATGAGTGTAGGAT 58.115 50.000 0.00 0.00 0.00 3.24
5164 9907 1.656587 AACAGCCCATGAGTGTAGGA 58.343 50.000 0.00 0.00 0.00 2.94
5165 9908 2.496899 AAACAGCCCATGAGTGTAGG 57.503 50.000 0.00 0.00 0.00 3.18
5166 9909 4.396166 CCTTTAAACAGCCCATGAGTGTAG 59.604 45.833 0.00 0.00 0.00 2.74
5167 9910 4.331968 CCTTTAAACAGCCCATGAGTGTA 58.668 43.478 0.00 0.00 0.00 2.90
5168 9911 3.157087 CCTTTAAACAGCCCATGAGTGT 58.843 45.455 0.00 0.00 0.00 3.55
5169 9912 2.094545 GCCTTTAAACAGCCCATGAGTG 60.095 50.000 0.00 0.00 0.00 3.51
5170 9913 2.171003 GCCTTTAAACAGCCCATGAGT 58.829 47.619 0.00 0.00 0.00 3.41
5171 9914 1.133025 CGCCTTTAAACAGCCCATGAG 59.867 52.381 0.00 0.00 0.00 2.90
5172 9915 1.173043 CGCCTTTAAACAGCCCATGA 58.827 50.000 0.00 0.00 0.00 3.07
5173 9916 0.458370 GCGCCTTTAAACAGCCCATG 60.458 55.000 0.00 0.00 0.00 3.66
5174 9917 0.611896 AGCGCCTTTAAACAGCCCAT 60.612 50.000 2.29 0.00 0.00 4.00
5175 9918 0.825840 AAGCGCCTTTAAACAGCCCA 60.826 50.000 2.29 0.00 0.00 5.36
5176 9919 0.317160 AAAGCGCCTTTAAACAGCCC 59.683 50.000 2.29 0.00 31.35 5.19
5177 9920 2.030628 TGTAAAGCGCCTTTAAACAGCC 60.031 45.455 2.29 0.00 37.62 4.85
5178 9921 3.276882 TGTAAAGCGCCTTTAAACAGC 57.723 42.857 2.29 0.00 37.62 4.40
5179 9922 5.051307 GGTTTTGTAAAGCGCCTTTAAACAG 60.051 40.000 2.29 0.00 37.62 3.16
5180 9923 4.804665 GGTTTTGTAAAGCGCCTTTAAACA 59.195 37.500 2.29 4.00 37.62 2.83
5181 9924 5.045215 AGGTTTTGTAAAGCGCCTTTAAAC 58.955 37.500 2.29 11.11 37.62 2.01
5182 9925 5.265350 AGGTTTTGTAAAGCGCCTTTAAA 57.735 34.783 2.29 0.76 37.62 1.52
5183 9926 4.922471 AGGTTTTGTAAAGCGCCTTTAA 57.078 36.364 2.29 0.00 37.62 1.52
5184 9927 4.261698 GGAAGGTTTTGTAAAGCGCCTTTA 60.262 41.667 2.29 5.86 36.58 1.85
5185 9928 3.491964 GGAAGGTTTTGTAAAGCGCCTTT 60.492 43.478 2.29 6.93 36.58 3.11
5186 9929 2.035449 GGAAGGTTTTGTAAAGCGCCTT 59.965 45.455 2.29 0.00 38.83 4.35
5187 9930 1.611977 GGAAGGTTTTGTAAAGCGCCT 59.388 47.619 2.29 0.00 0.00 5.52
5188 9931 1.338655 TGGAAGGTTTTGTAAAGCGCC 59.661 47.619 2.29 0.00 0.00 6.53
5189 9932 2.785713 TGGAAGGTTTTGTAAAGCGC 57.214 45.000 0.00 0.00 0.00 5.92
5190 9933 7.812669 AGATTAATTGGAAGGTTTTGTAAAGCG 59.187 33.333 0.00 0.00 0.00 4.68
5191 9934 9.489084 AAGATTAATTGGAAGGTTTTGTAAAGC 57.511 29.630 0.00 0.00 0.00 3.51
5196 9939 9.710900 GATTGAAGATTAATTGGAAGGTTTTGT 57.289 29.630 0.00 0.00 0.00 2.83
5197 9940 9.154847 GGATTGAAGATTAATTGGAAGGTTTTG 57.845 33.333 0.00 0.00 0.00 2.44
5198 9941 8.321353 GGGATTGAAGATTAATTGGAAGGTTTT 58.679 33.333 0.00 0.00 0.00 2.43
5199 9942 7.092891 GGGGATTGAAGATTAATTGGAAGGTTT 60.093 37.037 0.00 0.00 0.00 3.27
5200 9943 6.384015 GGGGATTGAAGATTAATTGGAAGGTT 59.616 38.462 0.00 0.00 0.00 3.50
5201 9944 5.899547 GGGGATTGAAGATTAATTGGAAGGT 59.100 40.000 0.00 0.00 0.00 3.50
5202 9945 5.305386 GGGGGATTGAAGATTAATTGGAAGG 59.695 44.000 0.00 0.00 0.00 3.46
5203 9946 5.898972 TGGGGGATTGAAGATTAATTGGAAG 59.101 40.000 0.00 0.00 0.00 3.46
5204 9947 5.848004 TGGGGGATTGAAGATTAATTGGAA 58.152 37.500 0.00 0.00 0.00 3.53
5205 9948 5.480058 TGGGGGATTGAAGATTAATTGGA 57.520 39.130 0.00 0.00 0.00 3.53
5206 9949 6.327104 TCAATGGGGGATTGAAGATTAATTGG 59.673 38.462 0.00 0.00 46.19 3.16
5207 9950 7.364149 TCAATGGGGGATTGAAGATTAATTG 57.636 36.000 0.00 0.00 46.19 2.32
5218 9961 4.761975 CAGTGAAATTCAATGGGGGATTG 58.238 43.478 14.81 0.00 38.65 2.67
5246 9989 2.941583 AGGAAGAGGGTTGGGGCC 60.942 66.667 0.00 0.00 0.00 5.80
5247 9990 2.356667 CAGGAAGAGGGTTGGGGC 59.643 66.667 0.00 0.00 0.00 5.80
5248 9991 0.842467 AGACAGGAAGAGGGTTGGGG 60.842 60.000 0.00 0.00 0.00 4.96
5249 9992 1.003696 GAAGACAGGAAGAGGGTTGGG 59.996 57.143 0.00 0.00 0.00 4.12
5250 9993 1.003696 GGAAGACAGGAAGAGGGTTGG 59.996 57.143 0.00 0.00 0.00 3.77
5251 9994 1.338200 CGGAAGACAGGAAGAGGGTTG 60.338 57.143 0.00 0.00 0.00 3.77
5252 9995 0.977395 CGGAAGACAGGAAGAGGGTT 59.023 55.000 0.00 0.00 0.00 4.11
5253 9996 0.114560 TCGGAAGACAGGAAGAGGGT 59.885 55.000 0.00 0.00 33.31 4.34
5254 9997 1.410882 GATCGGAAGACAGGAAGAGGG 59.589 57.143 0.00 0.00 46.97 4.30
5255 9998 1.066303 CGATCGGAAGACAGGAAGAGG 59.934 57.143 7.38 0.00 46.97 3.69
5256 9999 1.746220 ACGATCGGAAGACAGGAAGAG 59.254 52.381 20.98 0.00 46.97 2.85
5257 10000 1.835494 ACGATCGGAAGACAGGAAGA 58.165 50.000 20.98 0.00 46.97 2.87
5258 10001 2.656560 AACGATCGGAAGACAGGAAG 57.343 50.000 20.98 0.00 46.97 3.46
5259 10002 3.064207 CAAAACGATCGGAAGACAGGAA 58.936 45.455 20.98 0.00 46.97 3.36
5260 10003 2.036733 ACAAAACGATCGGAAGACAGGA 59.963 45.455 20.98 0.00 46.97 3.86
5261 10004 2.412089 GACAAAACGATCGGAAGACAGG 59.588 50.000 20.98 2.95 46.97 4.00
5262 10005 2.412089 GGACAAAACGATCGGAAGACAG 59.588 50.000 20.98 4.94 46.97 3.51
5263 10006 2.409975 GGACAAAACGATCGGAAGACA 58.590 47.619 20.98 0.00 46.97 3.41
5264 10007 1.730612 GGGACAAAACGATCGGAAGAC 59.269 52.381 20.98 6.56 46.97 3.01
5266 10009 0.719465 CGGGACAAAACGATCGGAAG 59.281 55.000 20.98 8.71 0.00 3.46
5267 10010 0.317799 TCGGGACAAAACGATCGGAA 59.682 50.000 20.98 0.00 33.69 4.30
5268 10011 0.317799 TTCGGGACAAAACGATCGGA 59.682 50.000 20.98 0.07 39.06 4.55
5269 10012 1.127951 CTTTCGGGACAAAACGATCGG 59.872 52.381 20.98 3.61 39.06 4.18
5270 10013 1.463528 GCTTTCGGGACAAAACGATCG 60.464 52.381 14.88 14.88 39.06 3.69
5271 10014 1.533731 TGCTTTCGGGACAAAACGATC 59.466 47.619 0.00 0.00 39.06 3.69
5272 10015 1.600023 TGCTTTCGGGACAAAACGAT 58.400 45.000 0.00 0.00 39.06 3.73
5273 10016 1.064357 GTTGCTTTCGGGACAAAACGA 59.936 47.619 0.00 0.00 37.33 3.85
5274 10017 1.064952 AGTTGCTTTCGGGACAAAACG 59.935 47.619 0.00 0.00 0.00 3.60
5275 10018 2.863401 AGTTGCTTTCGGGACAAAAC 57.137 45.000 0.00 0.00 0.00 2.43
5276 10019 3.547746 ACTAGTTGCTTTCGGGACAAAA 58.452 40.909 0.00 0.00 0.00 2.44
5277 10020 3.202829 ACTAGTTGCTTTCGGGACAAA 57.797 42.857 0.00 0.00 0.00 2.83
5278 10021 2.922740 ACTAGTTGCTTTCGGGACAA 57.077 45.000 0.00 0.00 0.00 3.18
5279 10022 2.922740 AACTAGTTGCTTTCGGGACA 57.077 45.000 7.48 0.00 0.00 4.02
5280 10023 3.122445 CGTTAACTAGTTGCTTTCGGGAC 59.878 47.826 18.56 2.61 0.00 4.46
5281 10024 3.005684 TCGTTAACTAGTTGCTTTCGGGA 59.994 43.478 18.56 1.86 0.00 5.14
5282 10025 3.319755 TCGTTAACTAGTTGCTTTCGGG 58.680 45.455 18.56 0.00 0.00 5.14
5283 10026 3.985925 ACTCGTTAACTAGTTGCTTTCGG 59.014 43.478 18.56 10.66 0.00 4.30
5284 10027 4.663389 GCACTCGTTAACTAGTTGCTTTCG 60.663 45.833 18.56 13.80 0.00 3.46
5285 10028 4.448060 AGCACTCGTTAACTAGTTGCTTTC 59.552 41.667 18.56 3.39 30.88 2.62
5286 10029 4.377897 AGCACTCGTTAACTAGTTGCTTT 58.622 39.130 18.56 9.27 30.88 3.51
5287 10030 3.988517 GAGCACTCGTTAACTAGTTGCTT 59.011 43.478 24.25 15.27 33.35 3.91
5288 10031 3.576648 GAGCACTCGTTAACTAGTTGCT 58.423 45.455 23.95 23.95 34.79 3.91
5289 10032 2.666994 GGAGCACTCGTTAACTAGTTGC 59.333 50.000 18.56 18.40 0.00 4.17
5290 10033 4.175787 AGGAGCACTCGTTAACTAGTTG 57.824 45.455 18.56 3.38 0.00 3.16
5291 10034 4.868314 AAGGAGCACTCGTTAACTAGTT 57.132 40.909 13.68 13.68 36.12 2.24
5292 10035 4.398673 CCTAAGGAGCACTCGTTAACTAGT 59.601 45.833 6.95 6.95 38.81 2.57
5293 10036 4.202030 CCCTAAGGAGCACTCGTTAACTAG 60.202 50.000 12.40 5.63 38.81 2.57
5294 10037 3.698040 CCCTAAGGAGCACTCGTTAACTA 59.302 47.826 12.40 0.00 38.81 2.24
5295 10038 2.496470 CCCTAAGGAGCACTCGTTAACT 59.504 50.000 12.40 0.00 38.81 2.24
5296 10039 2.233186 ACCCTAAGGAGCACTCGTTAAC 59.767 50.000 12.40 0.00 38.81 2.01
5297 10040 2.532843 ACCCTAAGGAGCACTCGTTAA 58.467 47.619 12.40 0.47 38.81 2.01
5298 10041 2.226962 ACCCTAAGGAGCACTCGTTA 57.773 50.000 11.20 11.20 38.46 3.18
5299 10042 1.275573 GAACCCTAAGGAGCACTCGTT 59.724 52.381 10.17 10.17 40.33 3.85
5300 10043 0.896226 GAACCCTAAGGAGCACTCGT 59.104 55.000 0.00 0.00 36.73 4.18
5301 10044 1.135333 GAGAACCCTAAGGAGCACTCG 59.865 57.143 0.00 0.00 36.73 4.18
5302 10045 2.462723 AGAGAACCCTAAGGAGCACTC 58.537 52.381 0.00 0.00 36.73 3.51
5303 10046 2.632763 AGAGAACCCTAAGGAGCACT 57.367 50.000 0.00 0.00 36.73 4.40
5304 10047 2.431419 GGTAGAGAACCCTAAGGAGCAC 59.569 54.545 0.00 0.00 43.16 4.40
5305 10048 2.748388 GGTAGAGAACCCTAAGGAGCA 58.252 52.381 0.00 0.00 43.16 4.26
5316 10059 4.495422 ACACATGACGAATGGTAGAGAAC 58.505 43.478 0.00 0.00 40.94 3.01
5317 10060 4.674362 CGACACATGACGAATGGTAGAGAA 60.674 45.833 0.00 0.00 40.94 2.87
5318 10061 3.181500 CGACACATGACGAATGGTAGAGA 60.181 47.826 0.00 0.00 40.94 3.10
5319 10062 3.108881 CGACACATGACGAATGGTAGAG 58.891 50.000 0.00 0.00 40.94 2.43
5320 10063 2.734175 GCGACACATGACGAATGGTAGA 60.734 50.000 7.91 0.00 40.94 2.59
5321 10064 1.588404 GCGACACATGACGAATGGTAG 59.412 52.381 7.91 0.00 40.94 3.18
5322 10065 1.635844 GCGACACATGACGAATGGTA 58.364 50.000 7.91 0.00 40.94 3.25
5323 10066 1.351430 CGCGACACATGACGAATGGT 61.351 55.000 0.00 0.00 40.94 3.55
5377 10133 4.032331 GCCAAAAACGCGTGCAAAATATAT 59.968 37.500 14.98 0.00 0.00 0.86
5378 10134 3.365220 GCCAAAAACGCGTGCAAAATATA 59.635 39.130 14.98 0.00 0.00 0.86
5379 10135 2.156697 GCCAAAAACGCGTGCAAAATAT 59.843 40.909 14.98 0.00 0.00 1.28
5437 10204 4.589216 TCGAAAAGTTAAGGAAGACCGA 57.411 40.909 0.00 0.00 41.83 4.69
5506 10292 3.303725 CCATGACTCTCGCGAAACAAAAA 60.304 43.478 11.33 0.00 0.00 1.94
5511 10300 1.429463 AACCATGACTCTCGCGAAAC 58.571 50.000 11.33 2.35 0.00 2.78
5547 10344 2.798283 CTCTCACGAAAGCAAAACCGTA 59.202 45.455 0.00 0.00 33.62 4.02
5548 10345 1.597663 CTCTCACGAAAGCAAAACCGT 59.402 47.619 0.00 0.00 35.46 4.83
5549 10346 1.597663 ACTCTCACGAAAGCAAAACCG 59.402 47.619 0.00 0.00 0.00 4.44
5550 10347 2.612212 TGACTCTCACGAAAGCAAAACC 59.388 45.455 0.00 0.00 0.00 3.27
5551 10348 3.608456 GTGACTCTCACGAAAGCAAAAC 58.392 45.455 0.00 0.00 37.67 2.43
5552 10349 3.944422 GTGACTCTCACGAAAGCAAAA 57.056 42.857 0.00 0.00 37.67 2.44
5562 10359 1.448540 CCATGGCCGTGACTCTCAC 60.449 63.158 27.13 0.00 43.65 3.51
5563 10360 2.981302 CCATGGCCGTGACTCTCA 59.019 61.111 27.13 0.00 0.00 3.27
5564 10361 2.512515 GCCATGGCCGTGACTCTC 60.513 66.667 27.24 6.01 34.56 3.20
5565 10362 3.005539 AGCCATGGCCGTGACTCT 61.006 61.111 33.14 16.19 43.17 3.24
5566 10363 2.512515 GAGCCATGGCCGTGACTC 60.513 66.667 33.14 25.13 43.17 3.36
5567 10364 3.005539 AGAGCCATGGCCGTGACT 61.006 61.111 33.14 21.03 43.17 3.41
5568 10365 2.512515 GAGAGCCATGGCCGTGAC 60.513 66.667 33.14 15.74 43.17 3.67
5569 10366 4.147449 CGAGAGCCATGGCCGTGA 62.147 66.667 33.14 0.00 43.17 4.35
5572 10369 3.680620 TTTCCGAGAGCCATGGCCG 62.681 63.158 33.14 27.10 43.17 6.13
5573 10370 2.115291 GTTTCCGAGAGCCATGGCC 61.115 63.158 33.14 23.29 43.17 5.36
5574 10371 1.372087 CTGTTTCCGAGAGCCATGGC 61.372 60.000 30.12 30.12 42.33 4.40
5575 10372 0.250234 TCTGTTTCCGAGAGCCATGG 59.750 55.000 7.63 7.63 0.00 3.66
5576 10373 2.099141 TTCTGTTTCCGAGAGCCATG 57.901 50.000 0.00 0.00 0.00 3.66
5577 10374 2.859165 TTTCTGTTTCCGAGAGCCAT 57.141 45.000 0.00 0.00 0.00 4.40
5578 10375 2.631160 TTTTCTGTTTCCGAGAGCCA 57.369 45.000 0.00 0.00 0.00 4.75
5615 10412 2.140717 GGGACTCTCGCGAAAGAAAAA 58.859 47.619 17.91 0.00 0.00 1.94
5616 10413 1.792006 GGGACTCTCGCGAAAGAAAA 58.208 50.000 17.91 0.00 0.00 2.29
5617 10414 3.509388 GGGACTCTCGCGAAAGAAA 57.491 52.632 17.91 0.00 0.00 2.52
5625 10422 3.119096 GCAAACCGGGACTCTCGC 61.119 66.667 6.32 0.00 0.00 5.03
5626 10423 1.004918 AAGCAAACCGGGACTCTCG 60.005 57.895 6.32 0.00 0.00 4.04
5627 10424 0.673956 GGAAGCAAACCGGGACTCTC 60.674 60.000 6.32 0.00 0.00 3.20
5628 10425 1.375326 GGAAGCAAACCGGGACTCT 59.625 57.895 6.32 0.00 0.00 3.24
5629 10426 2.033194 CGGAAGCAAACCGGGACTC 61.033 63.158 6.32 0.00 45.65 3.36
5630 10427 2.032071 CGGAAGCAAACCGGGACT 59.968 61.111 6.32 0.00 45.65 3.85
5647 10444 2.658707 GCACAACCGTGTCTCTCGC 61.659 63.158 0.00 0.00 45.50 5.03
5648 10445 0.597637 AAGCACAACCGTGTCTCTCG 60.598 55.000 0.00 0.00 45.50 4.04
5649 10446 1.583054 AAAGCACAACCGTGTCTCTC 58.417 50.000 0.00 0.00 45.50 3.20
5650 10447 2.755650 CTAAAGCACAACCGTGTCTCT 58.244 47.619 0.00 0.00 45.50 3.10
5651 10448 1.194772 GCTAAAGCACAACCGTGTCTC 59.805 52.381 0.00 0.00 45.50 3.36
5652 10449 1.226746 GCTAAAGCACAACCGTGTCT 58.773 50.000 0.00 0.00 45.50 3.41
5653 10450 0.110823 CGCTAAAGCACAACCGTGTC 60.111 55.000 2.44 0.00 45.50 3.67
5654 10451 0.531090 TCGCTAAAGCACAACCGTGT 60.531 50.000 2.44 0.00 45.50 4.49
5731 10866 2.683968 AGCAAAATCGTTACTCTCGCA 58.316 42.857 0.00 0.00 0.00 5.10
5875 11020 3.159984 GTGCCTCTCACGAAAGCG 58.840 61.111 0.00 0.00 44.79 4.68
5945 11091 9.774413 AAAGGAAGAAGAATAAGAGAAAACGTA 57.226 29.630 0.00 0.00 0.00 3.57
5967 11115 0.037232 ACTCTCGCGGAAGGAAAAGG 60.037 55.000 6.13 0.00 0.00 3.11
5968 11116 3.516578 ACTCTCGCGGAAGGAAAAG 57.483 52.632 6.13 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.