Multiple sequence alignment - TraesCS7A01G319200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G319200 chr7A 100.000 4420 0 0 1 4420 459519725 459515306 0.000000e+00 8163.0
1 TraesCS7A01G319200 chr7A 95.775 142 6 0 1 142 497685669 497685810 3.440000e-56 230.0
2 TraesCS7A01G319200 chr7B 91.146 1344 61 18 2148 3470 411413627 411412321 0.000000e+00 1770.0
3 TraesCS7A01G319200 chr7B 94.135 1023 43 5 716 1731 411415978 411414966 0.000000e+00 1541.0
4 TraesCS7A01G319200 chr7B 90.037 271 20 5 389 655 411435924 411435657 1.180000e-90 344.0
5 TraesCS7A01G319200 chr7B 91.667 240 20 0 148 387 411457786 411457547 2.550000e-87 333.0
6 TraesCS7A01G319200 chr7B 89.032 155 8 3 1920 2072 411413790 411413643 2.720000e-42 183.0
7 TraesCS7A01G319200 chr7B 95.000 80 4 0 1850 1929 411414957 411414878 4.640000e-25 126.0
8 TraesCS7A01G319200 chr7D 89.970 1326 86 21 2166 3470 401782559 401781260 0.000000e+00 1668.0
9 TraesCS7A01G319200 chr7D 87.084 1022 69 40 652 1648 401783905 401782922 0.000000e+00 1098.0
10 TraesCS7A01G319200 chr7D 90.698 516 32 10 148 656 401788209 401787703 0.000000e+00 673.0
11 TraesCS7A01G319200 chr7D 93.023 43 3 0 1753 1795 578154370 578154328 3.690000e-06 63.9
12 TraesCS7A01G319200 chr3A 91.795 780 57 5 3646 4420 712644468 712643691 0.000000e+00 1079.0
13 TraesCS7A01G319200 chr3A 90.827 774 66 3 3652 4420 743767316 743766543 0.000000e+00 1031.0
14 TraesCS7A01G319200 chr3A 91.096 146 13 0 1 146 707919548 707919693 9.700000e-47 198.0
15 TraesCS7A01G319200 chr3A 89.933 149 15 0 1 149 24050511 24050363 4.510000e-45 193.0
16 TraesCS7A01G319200 chr4D 90.385 780 67 6 3646 4420 468013234 468014010 0.000000e+00 1018.0
17 TraesCS7A01G319200 chr4D 95.238 42 2 0 1753 1794 253767501 253767542 2.850000e-07 67.6
18 TraesCS7A01G319200 chr5A 90.128 780 67 8 3646 4418 316546792 316546016 0.000000e+00 1005.0
19 TraesCS7A01G319200 chr5A 89.960 757 73 3 3666 4420 224474664 224475419 0.000000e+00 974.0
20 TraesCS7A01G319200 chr5A 89.241 158 16 1 1 158 244431575 244431731 3.490000e-46 196.0
21 TraesCS7A01G319200 chr5A 81.757 148 25 2 3473 3619 86668927 86669073 6.000000e-24 122.0
22 TraesCS7A01G319200 chr6A 89.898 782 71 6 3645 4420 124440402 124441181 0.000000e+00 1000.0
23 TraesCS7A01G319200 chr6A 94.040 151 8 1 1 151 572571589 572571738 1.240000e-55 228.0
24 TraesCS7A01G319200 chr6A 93.478 46 3 0 1749 1794 67514478 67514523 7.930000e-08 69.4
25 TraesCS7A01G319200 chr6A 95.122 41 2 0 1754 1794 84047635 84047675 1.030000e-06 65.8
26 TraesCS7A01G319200 chr2A 89.770 782 71 7 3646 4420 30930351 30929572 0.000000e+00 992.0
27 TraesCS7A01G319200 chr2A 88.747 782 78 8 3646 4420 774832264 774833042 0.000000e+00 948.0
28 TraesCS7A01G319200 chr2A 95.172 145 3 1 1 145 25378864 25379004 4.450000e-55 226.0
29 TraesCS7A01G319200 chr2A 91.096 146 13 0 1 146 701016838 701016693 9.700000e-47 198.0
30 TraesCS7A01G319200 chr2A 89.610 154 15 1 1 154 38649913 38649761 1.250000e-45 195.0
31 TraesCS7A01G319200 chr4A 89.272 783 74 8 3645 4420 478577967 478578746 0.000000e+00 972.0
32 TraesCS7A01G319200 chr4A 95.238 42 2 0 1753 1794 200089206 200089165 2.850000e-07 67.6
33 TraesCS7A01G319200 chr4A 88.462 52 5 1 1753 1804 697983030 697983080 1.330000e-05 62.1
34 TraesCS7A01G319200 chrUn 91.096 146 13 0 1 146 397099561 397099706 9.700000e-47 198.0
35 TraesCS7A01G319200 chr2B 80.000 150 30 0 3473 3622 575377790 575377641 1.300000e-20 111.0
36 TraesCS7A01G319200 chr2B 91.304 46 4 0 1749 1794 514342206 514342161 3.690000e-06 63.9
37 TraesCS7A01G319200 chr3D 80.000 130 21 5 3473 3600 470721828 470721702 1.690000e-14 91.6
38 TraesCS7A01G319200 chr3D 93.023 43 3 0 1753 1795 388797501 388797459 3.690000e-06 63.9
39 TraesCS7A01G319200 chr1A 81.373 102 15 2 3518 3619 362676848 362676945 3.660000e-11 80.5
40 TraesCS7A01G319200 chr1A 81.188 101 16 3 3473 3571 557106836 557106737 1.320000e-10 78.7
41 TraesCS7A01G319200 chr1A 91.111 45 4 0 2242 2286 458396166 458396210 1.330000e-05 62.1
42 TraesCS7A01G319200 chr1B 78.333 120 18 6 2174 2286 480655841 480655959 2.210000e-08 71.3
43 TraesCS7A01G319200 chr6D 93.333 45 3 0 1753 1797 455738819 455738863 2.850000e-07 67.6
44 TraesCS7A01G319200 chr1D 77.311 119 21 4 2174 2286 357214198 357214316 1.030000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G319200 chr7A 459515306 459519725 4419 True 8163.000000 8163 100.000000 1 4420 1 chr7A.!!$R1 4419
1 TraesCS7A01G319200 chr7B 411412321 411415978 3657 True 905.000000 1770 92.328250 716 3470 4 chr7B.!!$R3 2754
2 TraesCS7A01G319200 chr7D 401781260 401788209 6949 True 1146.333333 1668 89.250667 148 3470 3 chr7D.!!$R2 3322
3 TraesCS7A01G319200 chr3A 712643691 712644468 777 True 1079.000000 1079 91.795000 3646 4420 1 chr3A.!!$R2 774
4 TraesCS7A01G319200 chr3A 743766543 743767316 773 True 1031.000000 1031 90.827000 3652 4420 1 chr3A.!!$R3 768
5 TraesCS7A01G319200 chr4D 468013234 468014010 776 False 1018.000000 1018 90.385000 3646 4420 1 chr4D.!!$F2 774
6 TraesCS7A01G319200 chr5A 316546016 316546792 776 True 1005.000000 1005 90.128000 3646 4418 1 chr5A.!!$R1 772
7 TraesCS7A01G319200 chr5A 224474664 224475419 755 False 974.000000 974 89.960000 3666 4420 1 chr5A.!!$F2 754
8 TraesCS7A01G319200 chr6A 124440402 124441181 779 False 1000.000000 1000 89.898000 3645 4420 1 chr6A.!!$F3 775
9 TraesCS7A01G319200 chr2A 30929572 30930351 779 True 992.000000 992 89.770000 3646 4420 1 chr2A.!!$R1 774
10 TraesCS7A01G319200 chr2A 774832264 774833042 778 False 948.000000 948 88.747000 3646 4420 1 chr2A.!!$F2 774
11 TraesCS7A01G319200 chr4A 478577967 478578746 779 False 972.000000 972 89.272000 3645 4420 1 chr4A.!!$F1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 473 0.037590 CCGGTTGGTGAGATTTGGGA 59.962 55.0 0.00 0.0 0.00 4.37 F
1101 4921 0.319641 GACCAGACAACACCGGAGTC 60.320 60.0 9.46 10.7 0.00 3.36 F
2503 7502 0.320073 GTCCATCGTGTTCGTGGGAA 60.320 55.0 0.00 0.0 39.99 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 5269 0.108615 ATCCTCCGAGTTCAACTGCG 60.109 55.0 0.00 0.00 0.00 5.18 R
2998 8011 0.036577 AGCGCATTCTCAGTTCTGCT 60.037 50.0 11.47 0.00 32.48 4.24 R
3649 8668 0.976641 GGGGGCTCCTTTTCCAAAAG 59.023 55.0 0.52 4.99 43.82 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 9.541143 TCATATGTCATTGATTTTACGCTAAGA 57.459 29.630 1.90 0.00 0.00 2.10
41 42 8.262715 TGTCATTGATTTTACGCTAAGATTCA 57.737 30.769 0.00 0.00 0.00 2.57
42 43 8.892723 TGTCATTGATTTTACGCTAAGATTCAT 58.107 29.630 0.00 0.00 0.00 2.57
43 44 9.162793 GTCATTGATTTTACGCTAAGATTCATG 57.837 33.333 0.00 0.00 0.00 3.07
44 45 7.857389 TCATTGATTTTACGCTAAGATTCATGC 59.143 33.333 0.00 0.00 0.00 4.06
45 46 6.676237 TGATTTTACGCTAAGATTCATGCA 57.324 33.333 0.00 0.00 0.00 3.96
46 47 7.082700 TGATTTTACGCTAAGATTCATGCAA 57.917 32.000 0.00 0.00 0.00 4.08
47 48 7.534282 TGATTTTACGCTAAGATTCATGCAAA 58.466 30.769 0.00 0.00 0.00 3.68
48 49 7.484641 TGATTTTACGCTAAGATTCATGCAAAC 59.515 33.333 0.00 0.00 0.00 2.93
49 50 3.764885 ACGCTAAGATTCATGCAAACC 57.235 42.857 0.00 0.00 0.00 3.27
50 51 3.347216 ACGCTAAGATTCATGCAAACCT 58.653 40.909 0.00 0.00 0.00 3.50
51 52 3.758554 ACGCTAAGATTCATGCAAACCTT 59.241 39.130 0.00 0.00 0.00 3.50
52 53 4.218417 ACGCTAAGATTCATGCAAACCTTT 59.782 37.500 0.00 0.00 0.00 3.11
53 54 5.163513 CGCTAAGATTCATGCAAACCTTTT 58.836 37.500 0.00 0.00 0.00 2.27
54 55 5.287035 CGCTAAGATTCATGCAAACCTTTTC 59.713 40.000 0.00 0.00 0.00 2.29
55 56 6.393171 GCTAAGATTCATGCAAACCTTTTCT 58.607 36.000 0.00 0.00 0.00 2.52
56 57 6.870439 GCTAAGATTCATGCAAACCTTTTCTT 59.130 34.615 0.00 0.00 0.00 2.52
57 58 7.386025 GCTAAGATTCATGCAAACCTTTTCTTT 59.614 33.333 0.00 0.00 0.00 2.52
58 59 7.486802 AAGATTCATGCAAACCTTTTCTTTG 57.513 32.000 0.00 0.00 0.00 2.77
59 60 6.585416 AGATTCATGCAAACCTTTTCTTTGT 58.415 32.000 0.00 0.00 32.18 2.83
60 61 6.703165 AGATTCATGCAAACCTTTTCTTTGTC 59.297 34.615 0.00 0.00 32.18 3.18
61 62 5.596836 TCATGCAAACCTTTTCTTTGTCT 57.403 34.783 0.00 0.00 32.18 3.41
62 63 5.976458 TCATGCAAACCTTTTCTTTGTCTT 58.024 33.333 0.00 0.00 32.18 3.01
63 64 6.405538 TCATGCAAACCTTTTCTTTGTCTTT 58.594 32.000 0.00 0.00 32.18 2.52
64 65 6.878389 TCATGCAAACCTTTTCTTTGTCTTTT 59.122 30.769 0.00 0.00 32.18 2.27
65 66 7.390162 TCATGCAAACCTTTTCTTTGTCTTTTT 59.610 29.630 0.00 0.00 32.18 1.94
104 105 8.939201 ATACTTGATTCACTCACTTAGATGTG 57.061 34.615 0.00 0.00 39.15 3.21
105 106 5.641209 ACTTGATTCACTCACTTAGATGTGC 59.359 40.000 0.00 0.00 37.81 4.57
106 107 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
107 108 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
108 109 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
109 110 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
110 111 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
111 112 7.601073 TTCACTCACTTAGATGTGCAATAAG 57.399 36.000 0.00 0.00 37.81 1.73
112 113 6.701340 TCACTCACTTAGATGTGCAATAAGT 58.299 36.000 8.35 8.35 39.67 2.24
113 114 7.836842 TCACTCACTTAGATGTGCAATAAGTA 58.163 34.615 12.07 4.39 37.59 2.24
114 115 7.976175 TCACTCACTTAGATGTGCAATAAGTAG 59.024 37.037 12.07 11.87 37.59 2.57
115 116 7.976175 CACTCACTTAGATGTGCAATAAGTAGA 59.024 37.037 12.07 11.12 37.59 2.59
116 117 8.194104 ACTCACTTAGATGTGCAATAAGTAGAG 58.806 37.037 21.28 21.28 37.59 2.43
117 118 6.980978 TCACTTAGATGTGCAATAAGTAGAGC 59.019 38.462 12.07 0.00 37.59 4.09
118 119 6.758416 CACTTAGATGTGCAATAAGTAGAGCA 59.242 38.462 12.07 0.00 37.59 4.26
126 127 6.715347 TGCAATAAGTAGAGCACATCTAGA 57.285 37.500 0.00 0.00 41.28 2.43
127 128 7.295322 TGCAATAAGTAGAGCACATCTAGAT 57.705 36.000 0.00 0.00 41.28 1.98
128 129 7.150640 TGCAATAAGTAGAGCACATCTAGATG 58.849 38.462 27.63 27.63 41.28 2.90
144 145 4.911901 TGTGCCCTAAACACACCC 57.088 55.556 0.00 0.00 42.88 4.61
145 146 2.236555 TGTGCCCTAAACACACCCT 58.763 52.632 0.00 0.00 42.88 4.34
146 147 0.109723 TGTGCCCTAAACACACCCTC 59.890 55.000 0.00 0.00 42.88 4.30
189 190 6.373759 ACCAAACCTTCTTCTTATCCTTTGT 58.626 36.000 0.00 0.00 0.00 2.83
193 194 7.929941 AACCTTCTTCTTATCCTTTGTGATC 57.070 36.000 0.00 0.00 0.00 2.92
199 200 4.921547 TCTTATCCTTTGTGATCGAGACG 58.078 43.478 0.00 0.00 0.00 4.18
206 207 5.124936 TCCTTTGTGATCGAGACGAATCTAA 59.875 40.000 0.00 0.00 39.99 2.10
215 216 4.798907 TCGAGACGAATCTAATGCAGTTTC 59.201 41.667 0.00 0.00 34.34 2.78
219 220 7.066374 AGACGAATCTAATGCAGTTTCTTTC 57.934 36.000 0.00 0.00 32.79 2.62
233 235 7.445096 TGCAGTTTCTTTCTGACATTGATCTTA 59.555 33.333 0.00 0.00 35.20 2.10
279 281 3.561120 AAATCCTGCCGCCAACCGA 62.561 57.895 0.00 0.00 40.02 4.69
280 282 3.976701 AATCCTGCCGCCAACCGAG 62.977 63.158 0.00 0.00 40.02 4.63
290 292 1.004918 CCAACCGAGTCCACACCTC 60.005 63.158 0.00 0.00 0.00 3.85
294 296 1.606601 CCGAGTCCACACCTCCAGA 60.607 63.158 0.00 0.00 0.00 3.86
301 303 3.395941 AGTCCACACCTCCAGAATTTCTT 59.604 43.478 0.00 0.00 0.00 2.52
303 305 3.652869 TCCACACCTCCAGAATTTCTTCT 59.347 43.478 0.00 0.00 42.59 2.85
305 307 5.488919 TCCACACCTCCAGAATTTCTTCTAT 59.511 40.000 0.00 0.00 39.78 1.98
312 314 3.316308 CCAGAATTTCTTCTATTGGGGCG 59.684 47.826 0.00 0.00 39.78 6.13
329 331 1.031571 GCGGCACATCCCTTCAATCA 61.032 55.000 0.00 0.00 0.00 2.57
330 332 0.734889 CGGCACATCCCTTCAATCAC 59.265 55.000 0.00 0.00 0.00 3.06
368 370 8.036575 AGTAATTATCTAACGCCGGCAAATATA 58.963 33.333 28.98 13.75 0.00 0.86
375 377 2.867975 ACGCCGGCAAATATACTGTAAC 59.132 45.455 28.98 0.00 0.00 2.50
416 420 2.132740 ATGTGCGCGTGTTCAAAAAT 57.867 40.000 8.43 0.00 0.00 1.82
450 454 6.019881 GCGGTTGATCCTAAAAATGTTTATGC 60.020 38.462 0.00 0.00 0.00 3.14
451 455 6.475402 CGGTTGATCCTAAAAATGTTTATGCC 59.525 38.462 0.00 0.00 0.00 4.40
465 469 2.799126 TATGCCGGTTGGTGAGATTT 57.201 45.000 1.90 0.00 37.67 2.17
468 472 1.595093 GCCGGTTGGTGAGATTTGGG 61.595 60.000 1.90 0.00 37.67 4.12
469 473 0.037590 CCGGTTGGTGAGATTTGGGA 59.962 55.000 0.00 0.00 0.00 4.37
470 474 1.546773 CCGGTTGGTGAGATTTGGGAA 60.547 52.381 0.00 0.00 0.00 3.97
485 489 9.962783 GAGATTTGGGAAGAAGATGATTAAATG 57.037 33.333 0.00 0.00 0.00 2.32
559 563 6.235664 GGGTAGTTCTTGGTTGTCTGAAATA 58.764 40.000 0.00 0.00 0.00 1.40
595 599 6.030228 CAGACCGAAATTTAAAGAATCAGGC 58.970 40.000 0.00 0.00 0.00 4.85
613 617 2.108250 AGGCTCTGTGGGCTTAAAAGAA 59.892 45.455 0.00 0.00 39.07 2.52
614 618 2.489722 GGCTCTGTGGGCTTAAAAGAAG 59.510 50.000 0.00 0.00 0.00 2.85
667 4477 5.462405 CGGACAACTAAGGATAGACTATGC 58.538 45.833 5.88 5.88 33.15 3.14
713 4523 1.757682 GGTTTCAACCCTGTGACACA 58.242 50.000 8.26 8.26 43.43 3.72
714 4524 2.306847 GGTTTCAACCCTGTGACACAT 58.693 47.619 9.11 0.00 43.43 3.21
1101 4921 0.319641 GACCAGACAACACCGGAGTC 60.320 60.000 9.46 10.70 0.00 3.36
1102 4922 1.004918 CCAGACAACACCGGAGTCC 60.005 63.158 9.46 0.00 32.82 3.85
1445 5269 1.066858 TCATTCCTTCTCCTGCACGAC 60.067 52.381 0.00 0.00 0.00 4.34
1542 5370 6.219417 TCAGACATGTTCATTTTGTTGGTT 57.781 33.333 0.00 0.00 0.00 3.67
1589 5417 3.548818 GCTAGCGTTTATTTCTGCCATGG 60.549 47.826 7.63 7.63 0.00 3.66
1606 5434 3.367703 CCATGGTCATTCTTTGCCAGAAC 60.368 47.826 2.57 0.00 44.70 3.01
1621 5449 3.728845 CCAGAACTCGACCAAAAGAGAA 58.271 45.455 0.00 0.00 37.87 2.87
1679 5541 4.395854 TGAACAATGCATGTCTGGTATGTC 59.604 41.667 0.00 0.00 42.99 3.06
1694 5556 7.066284 GTCTGGTATGTCTGCATCAGTAATTTT 59.934 37.037 0.00 0.00 36.58 1.82
1705 5567 7.307694 TGCATCAGTAATTTTTCTGCAAGTAG 58.692 34.615 0.00 0.00 35.42 2.57
1706 5568 7.040478 TGCATCAGTAATTTTTCTGCAAGTAGT 60.040 33.333 0.00 0.00 35.42 2.73
1709 5571 9.726438 ATCAGTAATTTTTCTGCAAGTAGTAGT 57.274 29.630 0.00 0.00 33.76 2.73
1710 5572 9.555727 TCAGTAATTTTTCTGCAAGTAGTAGTT 57.444 29.630 0.00 0.00 33.76 2.24
1738 5600 5.494390 TGTTTAAGTTTCCTACTCCCTCC 57.506 43.478 0.00 0.00 35.54 4.30
1739 5601 4.020839 TGTTTAAGTTTCCTACTCCCTCCG 60.021 45.833 0.00 0.00 35.54 4.63
1740 5602 2.322339 AAGTTTCCTACTCCCTCCGT 57.678 50.000 0.00 0.00 35.54 4.69
1741 5603 1.849977 AGTTTCCTACTCCCTCCGTC 58.150 55.000 0.00 0.00 28.23 4.79
1742 5604 1.358445 AGTTTCCTACTCCCTCCGTCT 59.642 52.381 0.00 0.00 28.23 4.18
1743 5605 2.177734 GTTTCCTACTCCCTCCGTCTT 58.822 52.381 0.00 0.00 0.00 3.01
1744 5606 3.011032 AGTTTCCTACTCCCTCCGTCTTA 59.989 47.826 0.00 0.00 28.23 2.10
1745 5607 3.959449 GTTTCCTACTCCCTCCGTCTTAT 59.041 47.826 0.00 0.00 0.00 1.73
1746 5608 5.103771 AGTTTCCTACTCCCTCCGTCTTATA 60.104 44.000 0.00 0.00 28.23 0.98
1748 5610 5.595814 TCCTACTCCCTCCGTCTTATAAT 57.404 43.478 0.00 0.00 0.00 1.28
1749 5611 6.708885 TCCTACTCCCTCCGTCTTATAATA 57.291 41.667 0.00 0.00 0.00 0.98
1751 5613 6.044754 TCCTACTCCCTCCGTCTTATAATACA 59.955 42.308 2.37 0.00 0.00 2.29
1752 5614 6.374894 CCTACTCCCTCCGTCTTATAATACAG 59.625 46.154 2.37 0.00 0.00 2.74
1753 5615 5.703310 ACTCCCTCCGTCTTATAATACAGT 58.297 41.667 2.37 0.00 0.00 3.55
1754 5616 6.845908 ACTCCCTCCGTCTTATAATACAGTA 58.154 40.000 2.37 0.00 0.00 2.74
1755 5617 6.941436 ACTCCCTCCGTCTTATAATACAGTAG 59.059 42.308 2.37 0.00 0.00 2.57
1756 5618 6.845908 TCCCTCCGTCTTATAATACAGTAGT 58.154 40.000 2.37 0.00 0.00 2.73
1757 5619 6.713903 TCCCTCCGTCTTATAATACAGTAGTG 59.286 42.308 0.00 0.00 0.00 2.74
1758 5620 6.489361 CCCTCCGTCTTATAATACAGTAGTGT 59.511 42.308 8.55 8.55 41.06 3.55
1759 5621 7.308469 CCCTCCGTCTTATAATACAGTAGTGTC 60.308 44.444 6.44 0.00 38.19 3.67
1760 5622 7.228108 CCTCCGTCTTATAATACAGTAGTGTCA 59.772 40.741 6.44 0.00 38.19 3.58
1761 5623 8.510243 TCCGTCTTATAATACAGTAGTGTCAA 57.490 34.615 6.44 0.00 38.19 3.18
1762 5624 8.959548 TCCGTCTTATAATACAGTAGTGTCAAA 58.040 33.333 6.44 0.00 38.19 2.69
1763 5625 9.577110 CCGTCTTATAATACAGTAGTGTCAAAA 57.423 33.333 6.44 0.00 38.19 2.44
1786 5648 7.931578 AAAACGTCCTACATTATGAAATGGA 57.068 32.000 0.00 0.00 45.72 3.41
1795 5657 6.831664 ACATTATGAAATGGAGGGAGTAGT 57.168 37.500 0.00 0.00 45.72 2.73
1796 5658 7.931015 ACATTATGAAATGGAGGGAGTAGTA 57.069 36.000 0.00 0.00 45.72 1.82
1797 5659 8.331931 ACATTATGAAATGGAGGGAGTAGTAA 57.668 34.615 0.00 0.00 45.72 2.24
1798 5660 8.949421 ACATTATGAAATGGAGGGAGTAGTAAT 58.051 33.333 0.00 0.00 45.72 1.89
1799 5661 9.224267 CATTATGAAATGGAGGGAGTAGTAATG 57.776 37.037 0.00 0.00 39.10 1.90
1800 5662 6.831664 ATGAAATGGAGGGAGTAGTAATGT 57.168 37.500 0.00 0.00 0.00 2.71
1801 5663 7.931015 ATGAAATGGAGGGAGTAGTAATGTA 57.069 36.000 0.00 0.00 0.00 2.29
1802 5664 7.743116 TGAAATGGAGGGAGTAGTAATGTAA 57.257 36.000 0.00 0.00 0.00 2.41
1803 5665 8.153221 TGAAATGGAGGGAGTAGTAATGTAAA 57.847 34.615 0.00 0.00 0.00 2.01
1804 5666 8.044908 TGAAATGGAGGGAGTAGTAATGTAAAC 58.955 37.037 0.00 0.00 0.00 2.01
1805 5667 7.504926 AATGGAGGGAGTAGTAATGTAAACA 57.495 36.000 0.00 0.00 0.00 2.83
1806 5668 7.691993 ATGGAGGGAGTAGTAATGTAAACAT 57.308 36.000 0.00 0.00 38.41 2.71
1807 5669 6.884832 TGGAGGGAGTAGTAATGTAAACATG 58.115 40.000 0.00 0.00 36.56 3.21
1808 5670 5.758784 GGAGGGAGTAGTAATGTAAACATGC 59.241 44.000 0.00 0.00 36.56 4.06
1809 5671 6.308015 AGGGAGTAGTAATGTAAACATGCA 57.692 37.500 0.00 0.00 36.56 3.96
1810 5672 6.349300 AGGGAGTAGTAATGTAAACATGCAG 58.651 40.000 0.00 0.00 36.56 4.41
1811 5673 6.070194 AGGGAGTAGTAATGTAAACATGCAGT 60.070 38.462 0.00 0.00 36.56 4.40
1812 5674 7.125204 AGGGAGTAGTAATGTAAACATGCAGTA 59.875 37.037 0.00 0.00 36.56 2.74
1813 5675 7.224167 GGGAGTAGTAATGTAAACATGCAGTAC 59.776 40.741 0.00 5.82 36.56 2.73
1814 5676 7.762615 GGAGTAGTAATGTAAACATGCAGTACA 59.237 37.037 17.07 8.25 38.25 2.90
1815 5677 8.703604 AGTAGTAATGTAAACATGCAGTACAG 57.296 34.615 17.07 0.00 38.25 2.74
1816 5678 6.422776 AGTAATGTAAACATGCAGTACAGC 57.577 37.500 2.82 2.82 38.25 4.40
1824 5686 2.452116 TGCAGTACAGCAGTTCCCT 58.548 52.632 9.11 0.00 40.11 4.20
1825 5687 0.321671 TGCAGTACAGCAGTTCCCTC 59.678 55.000 9.11 0.00 40.11 4.30
1826 5688 0.321671 GCAGTACAGCAGTTCCCTCA 59.678 55.000 5.23 0.00 0.00 3.86
1827 5689 1.270839 GCAGTACAGCAGTTCCCTCAA 60.271 52.381 5.23 0.00 0.00 3.02
1828 5690 2.810400 GCAGTACAGCAGTTCCCTCAAA 60.810 50.000 5.23 0.00 0.00 2.69
1829 5691 3.476552 CAGTACAGCAGTTCCCTCAAAA 58.523 45.455 0.00 0.00 0.00 2.44
1830 5692 3.882888 CAGTACAGCAGTTCCCTCAAAAA 59.117 43.478 0.00 0.00 0.00 1.94
1905 5767 1.938577 CGGACAGAGCATTGATTCAGG 59.061 52.381 0.00 0.00 0.00 3.86
1913 5775 2.089980 GCATTGATTCAGGACAGCACT 58.910 47.619 0.00 0.00 0.00 4.40
1933 6893 2.107141 CGGACAGGAGCCGGATTC 59.893 66.667 5.05 0.00 44.87 2.52
1960 6925 3.234353 TCACAGTGAGATGAGGTTGACT 58.766 45.455 0.00 0.00 0.00 3.41
2043 7011 9.871238 TTTTCTAACAGTCTGTACTCCAATATC 57.129 33.333 5.77 0.00 31.97 1.63
2047 7015 6.472686 ACAGTCTGTACTCCAATATCCTTC 57.527 41.667 2.87 0.00 31.97 3.46
2074 7042 6.314400 GTGCATGATAAACCAAATGCTGATTT 59.686 34.615 0.00 0.00 44.53 2.17
2075 7043 6.879993 TGCATGATAAACCAAATGCTGATTTT 59.120 30.769 0.00 0.00 44.53 1.82
2118 7086 3.777465 CTGCTCATCAGGGAACATTTG 57.223 47.619 0.00 0.00 39.15 2.32
2119 7087 3.349927 CTGCTCATCAGGGAACATTTGA 58.650 45.455 0.00 0.00 39.15 2.69
2120 7088 3.349927 TGCTCATCAGGGAACATTTGAG 58.650 45.455 0.00 0.00 35.77 3.02
2121 7089 2.098770 GCTCATCAGGGAACATTTGAGC 59.901 50.000 6.93 6.93 44.49 4.26
2122 7090 3.618351 CTCATCAGGGAACATTTGAGCT 58.382 45.455 0.00 0.00 0.00 4.09
2123 7091 4.015084 CTCATCAGGGAACATTTGAGCTT 58.985 43.478 0.00 0.00 0.00 3.74
2124 7092 3.760151 TCATCAGGGAACATTTGAGCTTG 59.240 43.478 0.00 0.00 0.00 4.01
2125 7093 2.517959 TCAGGGAACATTTGAGCTTGG 58.482 47.619 0.00 0.00 0.00 3.61
2126 7094 1.547372 CAGGGAACATTTGAGCTTGGG 59.453 52.381 0.00 0.00 0.00 4.12
2127 7095 1.428912 AGGGAACATTTGAGCTTGGGA 59.571 47.619 0.00 0.00 0.00 4.37
2128 7096 2.043526 AGGGAACATTTGAGCTTGGGAT 59.956 45.455 0.00 0.00 0.00 3.85
2129 7097 2.428530 GGGAACATTTGAGCTTGGGATC 59.571 50.000 0.00 0.00 0.00 3.36
2130 7098 3.091545 GGAACATTTGAGCTTGGGATCA 58.908 45.455 0.00 0.00 35.97 2.92
2131 7099 3.129988 GGAACATTTGAGCTTGGGATCAG 59.870 47.826 0.00 0.00 39.13 2.90
2132 7100 3.726557 ACATTTGAGCTTGGGATCAGA 57.273 42.857 0.00 0.00 39.13 3.27
2133 7101 4.246712 ACATTTGAGCTTGGGATCAGAT 57.753 40.909 0.00 0.00 39.13 2.90
2134 7102 5.378230 ACATTTGAGCTTGGGATCAGATA 57.622 39.130 0.00 0.00 39.13 1.98
2135 7103 5.128919 ACATTTGAGCTTGGGATCAGATAC 58.871 41.667 0.00 0.00 39.13 2.24
2136 7104 5.104193 ACATTTGAGCTTGGGATCAGATACT 60.104 40.000 0.00 0.00 39.13 2.12
2137 7105 4.679373 TTGAGCTTGGGATCAGATACTC 57.321 45.455 0.00 0.00 39.13 2.59
2138 7106 2.968574 TGAGCTTGGGATCAGATACTCC 59.031 50.000 0.00 0.00 32.54 3.85
2139 7107 2.968574 GAGCTTGGGATCAGATACTCCA 59.031 50.000 0.00 0.00 32.90 3.86
2140 7108 2.703007 AGCTTGGGATCAGATACTCCAC 59.297 50.000 0.00 0.00 32.90 4.02
2141 7109 2.546795 GCTTGGGATCAGATACTCCACG 60.547 54.545 0.00 0.00 32.90 4.94
2142 7110 2.454336 TGGGATCAGATACTCCACGT 57.546 50.000 0.00 0.00 32.90 4.49
2143 7111 2.307768 TGGGATCAGATACTCCACGTC 58.692 52.381 0.00 0.00 32.90 4.34
2144 7112 1.614413 GGGATCAGATACTCCACGTCC 59.386 57.143 0.00 0.00 32.90 4.79
2145 7113 2.588620 GGATCAGATACTCCACGTCCT 58.411 52.381 0.00 0.00 0.00 3.85
2146 7114 2.554893 GGATCAGATACTCCACGTCCTC 59.445 54.545 0.00 0.00 0.00 3.71
2147 7115 3.482436 GATCAGATACTCCACGTCCTCT 58.518 50.000 0.00 0.00 0.00 3.69
2148 7116 2.920524 TCAGATACTCCACGTCCTCTC 58.079 52.381 0.00 0.00 0.00 3.20
2151 7119 3.697045 CAGATACTCCACGTCCTCTCTTT 59.303 47.826 0.00 0.00 0.00 2.52
2307 7276 1.505425 AAGCGGTGGAAACTTCGTAC 58.495 50.000 0.00 0.00 0.00 3.67
2311 7280 1.453148 CGGTGGAAACTTCGTACGAAC 59.547 52.381 26.00 16.03 0.00 3.95
2323 7292 4.224715 TCGTACGAACTCATCCATGATC 57.775 45.455 17.11 0.00 36.02 2.92
2324 7293 3.004419 TCGTACGAACTCATCCATGATCC 59.996 47.826 17.11 0.00 36.02 3.36
2325 7294 3.243401 CGTACGAACTCATCCATGATCCA 60.243 47.826 10.44 0.00 36.02 3.41
2326 7295 4.559502 CGTACGAACTCATCCATGATCCAT 60.560 45.833 10.44 0.00 36.02 3.41
2327 7296 4.000331 ACGAACTCATCCATGATCCATC 58.000 45.455 0.00 0.00 36.02 3.51
2328 7297 3.244353 ACGAACTCATCCATGATCCATCC 60.244 47.826 0.00 0.00 36.02 3.51
2329 7298 3.244318 CGAACTCATCCATGATCCATCCA 60.244 47.826 0.00 0.00 36.02 3.41
2345 7314 7.453439 TGATCCATCCATGATTGCATCTAATTT 59.547 33.333 0.00 0.00 30.68 1.82
2352 7321 8.357402 TCCATGATTGCATCTAATTTTGATCAG 58.643 33.333 0.00 0.00 30.68 2.90
2378 7347 0.460284 ACGATGATCAACTGCCGGTC 60.460 55.000 1.90 0.00 0.00 4.79
2435 7404 2.564947 AGCAGATCCAGAACTTCGAGTT 59.435 45.455 0.71 0.71 41.95 3.01
2502 7501 1.290955 GTCCATCGTGTTCGTGGGA 59.709 57.895 0.00 0.00 38.12 4.37
2503 7502 0.320073 GTCCATCGTGTTCGTGGGAA 60.320 55.000 0.00 0.00 39.99 3.97
2529 7528 2.475487 GAGCAACGACTACCTGAACAAC 59.525 50.000 0.00 0.00 0.00 3.32
2539 7538 5.178797 ACTACCTGAACAACTACATCATGC 58.821 41.667 0.00 0.00 0.00 4.06
2623 7622 2.893398 CCTCCCAGCTCACCGTAC 59.107 66.667 0.00 0.00 0.00 3.67
2642 7655 4.381863 CGTACGATATCGATCAAAACCCTG 59.618 45.833 30.75 5.05 43.02 4.45
2681 7694 2.296190 GCTTGGAAGTTGGAACCGAATT 59.704 45.455 0.00 0.00 0.00 2.17
2682 7695 3.857010 GCTTGGAAGTTGGAACCGAATTG 60.857 47.826 0.00 0.00 0.00 2.32
2683 7696 3.216187 TGGAAGTTGGAACCGAATTGA 57.784 42.857 0.00 0.00 0.00 2.57
2684 7697 3.556999 TGGAAGTTGGAACCGAATTGAA 58.443 40.909 0.00 0.00 0.00 2.69
2685 7698 4.148838 TGGAAGTTGGAACCGAATTGAAT 58.851 39.130 0.00 0.00 0.00 2.57
2703 7716 3.648067 TGAATGACCAAGTCTCTCCAACT 59.352 43.478 0.00 0.00 33.15 3.16
2926 7939 1.668047 CCTTCACGTACCTCGACAACC 60.668 57.143 0.00 0.00 42.86 3.77
2979 7992 1.266446 GCCTCCTACGGTAAGATCGAC 59.734 57.143 0.00 0.00 0.00 4.20
2988 8001 1.452651 TAAGATCGACGGCCGGAGT 60.453 57.895 31.76 8.67 39.14 3.85
2999 8012 3.077556 CCGGAGTCCAGGGTCCAG 61.078 72.222 10.49 2.93 32.55 3.86
3000 8013 3.775654 CGGAGTCCAGGGTCCAGC 61.776 72.222 10.49 0.00 32.55 4.85
3001 8014 2.607750 GGAGTCCAGGGTCCAGCA 60.608 66.667 3.60 0.00 32.55 4.41
3002 8015 2.664081 GGAGTCCAGGGTCCAGCAG 61.664 68.421 3.60 0.00 32.55 4.24
3003 8016 1.610673 GAGTCCAGGGTCCAGCAGA 60.611 63.158 0.00 0.00 0.00 4.26
3004 8017 1.152030 AGTCCAGGGTCCAGCAGAA 60.152 57.895 0.00 0.00 0.00 3.02
3107 8123 4.467084 GGGTTGCTGCGGGATCGA 62.467 66.667 0.00 0.00 39.00 3.59
3132 8148 4.760047 GGCGGGCAGATGACGTGT 62.760 66.667 0.00 0.00 0.00 4.49
3301 8317 2.821366 AGCTCTGAAATGCCGGCG 60.821 61.111 23.90 6.13 0.00 6.46
3317 8333 1.648467 GGCGGCCACTTGATCTGAAC 61.648 60.000 15.62 0.00 0.00 3.18
3323 8339 3.370953 GGCCACTTGATCTGAACTACCAT 60.371 47.826 0.00 0.00 0.00 3.55
3325 8341 3.624861 CCACTTGATCTGAACTACCATGC 59.375 47.826 0.00 0.00 0.00 4.06
3332 8348 2.426024 TCTGAACTACCATGCCGACTAC 59.574 50.000 0.00 0.00 0.00 2.73
3333 8349 2.427453 CTGAACTACCATGCCGACTACT 59.573 50.000 0.00 0.00 0.00 2.57
3334 8350 2.165641 TGAACTACCATGCCGACTACTG 59.834 50.000 0.00 0.00 0.00 2.74
3372 8391 9.400638 CTCCGTAGTTAATAATCTGATCAGAAC 57.599 37.037 28.40 19.86 41.36 3.01
3383 8402 1.071605 GATCAGAACCAGACGTGTGC 58.928 55.000 7.28 0.00 0.00 4.57
3415 8434 6.536688 GCATGCAAAATTAAACTGAATGGAC 58.463 36.000 14.21 0.00 0.00 4.02
3452 8471 3.157087 ATGCTTGACATTTCCGAAGGTT 58.843 40.909 0.00 0.00 43.34 3.50
3453 8472 3.191371 ATGCTTGACATTTCCGAAGGTTC 59.809 43.478 0.00 0.00 43.34 3.62
3454 8473 5.877842 ATGCTTGACATTTCCGAAGGTTCC 61.878 45.833 0.00 0.00 43.34 3.62
3465 8484 1.001974 CGAAGGTTCCATGGTGAGTGA 59.998 52.381 12.58 0.00 0.00 3.41
3470 8489 5.255397 AGGTTCCATGGTGAGTGAAATTA 57.745 39.130 12.58 0.00 0.00 1.40
3471 8490 5.256474 AGGTTCCATGGTGAGTGAAATTAG 58.744 41.667 12.58 0.00 0.00 1.73
3472 8491 5.010282 GGTTCCATGGTGAGTGAAATTAGT 58.990 41.667 12.58 0.00 0.00 2.24
3473 8492 6.012858 AGGTTCCATGGTGAGTGAAATTAGTA 60.013 38.462 12.58 0.00 0.00 1.82
3474 8493 6.093633 GGTTCCATGGTGAGTGAAATTAGTAC 59.906 42.308 12.58 0.00 0.00 2.73
3475 8494 6.620877 TCCATGGTGAGTGAAATTAGTACT 57.379 37.500 12.58 0.00 0.00 2.73
3476 8495 7.727578 TCCATGGTGAGTGAAATTAGTACTA 57.272 36.000 12.58 0.00 0.00 1.82
3477 8496 7.553334 TCCATGGTGAGTGAAATTAGTACTAC 58.447 38.462 12.58 0.00 0.00 2.73
3478 8497 7.179516 TCCATGGTGAGTGAAATTAGTACTACA 59.820 37.037 12.58 0.00 0.00 2.74
3479 8498 7.987458 CCATGGTGAGTGAAATTAGTACTACAT 59.013 37.037 2.57 0.00 0.00 2.29
3480 8499 9.035607 CATGGTGAGTGAAATTAGTACTACATC 57.964 37.037 0.91 2.26 0.00 3.06
3481 8500 7.553334 TGGTGAGTGAAATTAGTACTACATCC 58.447 38.462 0.91 1.12 0.00 3.51
3482 8501 6.696148 GGTGAGTGAAATTAGTACTACATCCG 59.304 42.308 0.91 0.00 0.00 4.18
3483 8502 7.256286 GTGAGTGAAATTAGTACTACATCCGT 58.744 38.462 0.91 0.00 0.00 4.69
3484 8503 7.431668 GTGAGTGAAATTAGTACTACATCCGTC 59.568 40.741 0.91 2.41 0.00 4.79
3485 8504 6.803642 AGTGAAATTAGTACTACATCCGTCC 58.196 40.000 0.91 0.00 0.00 4.79
3486 8505 6.606395 AGTGAAATTAGTACTACATCCGTCCT 59.394 38.462 0.91 0.00 0.00 3.85
3487 8506 6.696148 GTGAAATTAGTACTACATCCGTCCTG 59.304 42.308 0.91 0.00 0.00 3.86
3488 8507 6.604396 TGAAATTAGTACTACATCCGTCCTGA 59.396 38.462 0.91 0.00 0.00 3.86
3489 8508 7.287005 TGAAATTAGTACTACATCCGTCCTGAT 59.713 37.037 0.91 0.00 0.00 2.90
3490 8509 7.598759 AATTAGTACTACATCCGTCCTGATT 57.401 36.000 0.91 0.00 0.00 2.57
3491 8510 7.598759 ATTAGTACTACATCCGTCCTGATTT 57.401 36.000 0.91 0.00 0.00 2.17
3492 8511 8.701908 ATTAGTACTACATCCGTCCTGATTTA 57.298 34.615 0.91 0.00 0.00 1.40
3493 8512 8.701908 TTAGTACTACATCCGTCCTGATTTAT 57.298 34.615 0.91 0.00 0.00 1.40
3494 8513 7.598759 AGTACTACATCCGTCCTGATTTATT 57.401 36.000 0.00 0.00 0.00 1.40
3495 8514 7.434492 AGTACTACATCCGTCCTGATTTATTG 58.566 38.462 0.00 0.00 0.00 1.90
3496 8515 5.611374 ACTACATCCGTCCTGATTTATTGG 58.389 41.667 0.00 0.00 0.00 3.16
3497 8516 4.503714 ACATCCGTCCTGATTTATTGGT 57.496 40.909 0.00 0.00 0.00 3.67
3498 8517 4.451900 ACATCCGTCCTGATTTATTGGTC 58.548 43.478 0.00 0.00 0.00 4.02
3499 8518 3.553828 TCCGTCCTGATTTATTGGTCC 57.446 47.619 0.00 0.00 0.00 4.46
3500 8519 3.112263 TCCGTCCTGATTTATTGGTCCT 58.888 45.455 0.00 0.00 0.00 3.85
3501 8520 3.134081 TCCGTCCTGATTTATTGGTCCTC 59.866 47.826 0.00 0.00 0.00 3.71
3502 8521 3.134804 CCGTCCTGATTTATTGGTCCTCT 59.865 47.826 0.00 0.00 0.00 3.69
3503 8522 4.384208 CCGTCCTGATTTATTGGTCCTCTT 60.384 45.833 0.00 0.00 0.00 2.85
3504 8523 4.811557 CGTCCTGATTTATTGGTCCTCTTC 59.188 45.833 0.00 0.00 0.00 2.87
3505 8524 5.626809 CGTCCTGATTTATTGGTCCTCTTCA 60.627 44.000 0.00 0.00 0.00 3.02
3506 8525 6.360618 GTCCTGATTTATTGGTCCTCTTCAT 58.639 40.000 0.00 0.00 0.00 2.57
3507 8526 7.509546 GTCCTGATTTATTGGTCCTCTTCATA 58.490 38.462 0.00 0.00 0.00 2.15
3508 8527 8.160106 GTCCTGATTTATTGGTCCTCTTCATAT 58.840 37.037 0.00 0.00 0.00 1.78
3509 8528 8.727149 TCCTGATTTATTGGTCCTCTTCATATT 58.273 33.333 0.00 0.00 0.00 1.28
3510 8529 9.359653 CCTGATTTATTGGTCCTCTTCATATTT 57.640 33.333 0.00 0.00 0.00 1.40
3516 8535 9.967451 TTATTGGTCCTCTTCATATTTTACACA 57.033 29.630 0.00 0.00 0.00 3.72
3517 8536 8.877864 ATTGGTCCTCTTCATATTTTACACAA 57.122 30.769 0.00 0.00 0.00 3.33
3518 8537 8.698973 TTGGTCCTCTTCATATTTTACACAAA 57.301 30.769 0.00 0.00 0.00 2.83
3519 8538 8.698973 TGGTCCTCTTCATATTTTACACAAAA 57.301 30.769 0.00 0.00 38.00 2.44
3520 8539 9.308000 TGGTCCTCTTCATATTTTACACAAAAT 57.692 29.630 1.44 1.44 44.60 1.82
3639 8658 9.759473 ATATTTCATAATAAACCATGAGGGAGG 57.241 33.333 0.00 0.00 33.58 4.30
3640 8659 6.590656 TTCATAATAAACCATGAGGGAGGT 57.409 37.500 0.00 0.00 41.15 3.85
3641 8660 7.699709 TTCATAATAAACCATGAGGGAGGTA 57.300 36.000 0.00 0.00 41.15 3.08
3642 8661 7.316393 TCATAATAAACCATGAGGGAGGTAG 57.684 40.000 0.00 0.00 41.15 3.18
3643 8662 6.849697 TCATAATAAACCATGAGGGAGGTAGT 59.150 38.462 0.00 0.00 41.15 2.73
3644 8663 8.014263 TCATAATAAACCATGAGGGAGGTAGTA 58.986 37.037 0.00 0.00 41.15 1.82
3649 8668 5.632034 ACCATGAGGGAGGTAGTATTTTC 57.368 43.478 0.00 0.00 41.15 2.29
3806 8830 6.781014 ACCTCAAGATTATAACCGGTGATAGA 59.219 38.462 8.52 2.58 0.00 1.98
3814 8838 5.888982 ATAACCGGTGATAGAAACAGGAT 57.111 39.130 8.52 0.00 36.50 3.24
3871 8895 5.277974 CGCCATCCAAACCAGTTGAATATAG 60.278 44.000 0.00 0.00 39.87 1.31
3897 8921 4.503123 CGTGCTATCATCTCCCATTGGTTA 60.503 45.833 1.20 0.00 0.00 2.85
3932 8956 1.734655 GGCTCCCTGGATTCCATAGA 58.265 55.000 5.70 5.32 30.82 1.98
3957 8981 4.028131 TGAGTAAGGACCACATACGGATT 58.972 43.478 0.00 0.00 0.00 3.01
3992 9016 3.405831 TGAAGATGACCTGCAAGAAGTG 58.594 45.455 0.00 0.00 34.07 3.16
4005 9029 8.421002 ACCTGCAAGAAGTGTAAAAATTATTGT 58.579 29.630 0.00 0.00 34.07 2.71
4031 9055 5.065090 TGTTAAAGATCATGTCATTCCTGCG 59.935 40.000 0.00 0.00 0.00 5.18
4046 9070 0.670546 CTGCGGTTCCATATAGCCCG 60.671 60.000 0.00 0.00 41.50 6.13
4111 9135 1.843851 GATCCACCCCATCTAACCACA 59.156 52.381 0.00 0.00 0.00 4.17
4113 9137 1.563879 TCCACCCCATCTAACCACATG 59.436 52.381 0.00 0.00 0.00 3.21
4136 9160 5.460419 TGCCAAACAACGATTCAATGTTAAC 59.540 36.000 0.00 0.00 36.33 2.01
4144 9168 4.019681 ACGATTCAATGTTAACTGGAGGGA 60.020 41.667 7.22 0.00 0.00 4.20
4215 9239 5.183904 AGGACAATCTATGAAAAGGTGTTGC 59.816 40.000 0.00 0.00 0.00 4.17
4258 9282 0.952497 ACAACATCGTGAGCTGCCTG 60.952 55.000 0.00 0.00 0.00 4.85
4311 9335 4.702831 TGAGAATCACTTGCTTGTGTACA 58.297 39.130 0.00 0.00 42.56 2.90
4329 9353 7.199766 TGTGTACAAACCACATGAAGATTTTC 58.800 34.615 0.00 0.00 37.88 2.29
4362 9386 5.377478 GGGACCTTAACTTTCCAGATATGG 58.623 45.833 0.00 0.00 31.94 2.74
4374 9398 3.011708 TCCAGATATGGATGGATCTCCGA 59.988 47.826 4.55 0.00 40.70 4.55
4395 9419 5.123227 CGAATTGGGCCAGAGTTAATTAGA 58.877 41.667 6.23 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.541143 TCTTAGCGTAAAATCAATGACATATGA 57.459 29.630 10.38 0.00 0.00 2.15
15 16 8.892723 TGAATCTTAGCGTAAAATCAATGACAT 58.107 29.630 0.00 0.00 0.00 3.06
16 17 8.262715 TGAATCTTAGCGTAAAATCAATGACA 57.737 30.769 0.00 0.00 0.00 3.58
17 18 9.162793 CATGAATCTTAGCGTAAAATCAATGAC 57.837 33.333 0.00 0.00 0.00 3.06
18 19 7.857389 GCATGAATCTTAGCGTAAAATCAATGA 59.143 33.333 0.00 0.00 0.00 2.57
19 20 7.644945 TGCATGAATCTTAGCGTAAAATCAATG 59.355 33.333 0.00 0.00 0.00 2.82
20 21 7.706159 TGCATGAATCTTAGCGTAAAATCAAT 58.294 30.769 0.00 0.00 0.00 2.57
21 22 7.082700 TGCATGAATCTTAGCGTAAAATCAA 57.917 32.000 0.00 0.00 0.00 2.57
22 23 6.676237 TGCATGAATCTTAGCGTAAAATCA 57.324 33.333 0.00 0.00 0.00 2.57
23 24 7.044052 GGTTTGCATGAATCTTAGCGTAAAATC 60.044 37.037 0.00 0.00 0.00 2.17
24 25 6.751888 GGTTTGCATGAATCTTAGCGTAAAAT 59.248 34.615 0.00 0.00 0.00 1.82
25 26 6.072175 AGGTTTGCATGAATCTTAGCGTAAAA 60.072 34.615 0.00 0.00 0.00 1.52
26 27 5.414454 AGGTTTGCATGAATCTTAGCGTAAA 59.586 36.000 0.00 0.00 0.00 2.01
27 28 4.941263 AGGTTTGCATGAATCTTAGCGTAA 59.059 37.500 0.00 0.00 0.00 3.18
28 29 4.513442 AGGTTTGCATGAATCTTAGCGTA 58.487 39.130 0.00 0.00 0.00 4.42
29 30 3.347216 AGGTTTGCATGAATCTTAGCGT 58.653 40.909 0.00 0.00 0.00 5.07
30 31 4.361451 AAGGTTTGCATGAATCTTAGCG 57.639 40.909 0.00 0.00 28.48 4.26
31 32 6.393171 AGAAAAGGTTTGCATGAATCTTAGC 58.607 36.000 0.00 0.00 30.08 3.09
32 33 8.706035 CAAAGAAAAGGTTTGCATGAATCTTAG 58.294 33.333 0.00 0.00 30.08 2.18
33 34 8.203485 ACAAAGAAAAGGTTTGCATGAATCTTA 58.797 29.630 0.00 0.00 38.27 2.10
34 35 7.049754 ACAAAGAAAAGGTTTGCATGAATCTT 58.950 30.769 0.00 0.00 38.27 2.40
35 36 6.585416 ACAAAGAAAAGGTTTGCATGAATCT 58.415 32.000 0.00 0.00 38.27 2.40
36 37 6.703165 AGACAAAGAAAAGGTTTGCATGAATC 59.297 34.615 0.00 0.00 38.27 2.52
37 38 6.585416 AGACAAAGAAAAGGTTTGCATGAAT 58.415 32.000 0.00 0.00 38.27 2.57
38 39 5.976458 AGACAAAGAAAAGGTTTGCATGAA 58.024 33.333 0.00 0.00 38.27 2.57
39 40 5.596836 AGACAAAGAAAAGGTTTGCATGA 57.403 34.783 0.00 0.00 38.27 3.07
40 41 6.667007 AAAGACAAAGAAAAGGTTTGCATG 57.333 33.333 0.00 0.00 38.27 4.06
41 42 7.686438 AAAAAGACAAAGAAAAGGTTTGCAT 57.314 28.000 0.00 0.00 38.27 3.96
79 80 7.493971 GCACATCTAAGTGAGTGAATCAAGTAT 59.506 37.037 0.00 0.00 42.05 2.12
80 81 6.813649 GCACATCTAAGTGAGTGAATCAAGTA 59.186 38.462 0.00 0.00 42.05 2.24
81 82 5.641209 GCACATCTAAGTGAGTGAATCAAGT 59.359 40.000 0.00 0.00 42.05 3.16
82 83 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
83 84 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
84 85 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
85 86 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
86 87 7.826252 ACTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 8.56 0.00 42.05 2.57
87 88 7.161404 ACTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 8.56 0.00 42.05 3.18
88 89 6.701340 ACTTATTGCACATCTAAGTGAGTGA 58.299 36.000 8.56 0.00 42.05 3.41
89 90 6.974932 ACTTATTGCACATCTAAGTGAGTG 57.025 37.500 8.56 0.00 42.05 3.51
90 91 8.067751 TCTACTTATTGCACATCTAAGTGAGT 57.932 34.615 15.31 0.00 42.05 3.41
91 92 7.168972 GCTCTACTTATTGCACATCTAAGTGAG 59.831 40.741 15.31 17.02 42.05 3.51
92 93 6.980978 GCTCTACTTATTGCACATCTAAGTGA 59.019 38.462 15.31 11.30 42.05 3.41
93 94 6.758416 TGCTCTACTTATTGCACATCTAAGTG 59.242 38.462 15.31 0.00 42.37 3.16
94 95 6.878317 TGCTCTACTTATTGCACATCTAAGT 58.122 36.000 12.25 12.25 38.75 2.24
103 104 6.715347 TCTAGATGTGCTCTACTTATTGCA 57.285 37.500 0.00 0.00 35.28 4.08
104 105 7.579589 CATCTAGATGTGCTCTACTTATTGC 57.420 40.000 22.42 0.00 35.28 3.56
119 120 4.572389 GTGTGTTTAGGGCACATCTAGATG 59.428 45.833 27.63 27.63 46.66 2.90
120 121 4.384208 GGTGTGTTTAGGGCACATCTAGAT 60.384 45.833 0.00 0.00 46.66 1.98
121 122 3.055385 GGTGTGTTTAGGGCACATCTAGA 60.055 47.826 0.00 0.00 46.66 2.43
122 123 3.270877 GGTGTGTTTAGGGCACATCTAG 58.729 50.000 1.42 0.00 46.66 2.43
123 124 2.026636 GGGTGTGTTTAGGGCACATCTA 60.027 50.000 8.33 0.00 46.66 1.98
124 125 1.271926 GGGTGTGTTTAGGGCACATCT 60.272 52.381 8.33 0.00 46.66 2.90
125 126 1.173913 GGGTGTGTTTAGGGCACATC 58.826 55.000 1.42 0.96 46.66 3.06
126 127 0.777446 AGGGTGTGTTTAGGGCACAT 59.223 50.000 1.42 0.00 46.66 3.21
127 128 0.109723 GAGGGTGTGTTTAGGGCACA 59.890 55.000 0.00 0.00 43.60 4.57
128 129 0.400594 AGAGGGTGTGTTTAGGGCAC 59.599 55.000 0.00 0.00 37.37 5.01
129 130 1.145571 AAGAGGGTGTGTTTAGGGCA 58.854 50.000 0.00 0.00 0.00 5.36
130 131 2.160205 GAAAGAGGGTGTGTTTAGGGC 58.840 52.381 0.00 0.00 0.00 5.19
131 132 3.502123 TGAAAGAGGGTGTGTTTAGGG 57.498 47.619 0.00 0.00 0.00 3.53
132 133 6.095440 CCAATATGAAAGAGGGTGTGTTTAGG 59.905 42.308 0.00 0.00 0.00 2.69
133 134 6.884295 TCCAATATGAAAGAGGGTGTGTTTAG 59.116 38.462 0.00 0.00 0.00 1.85
134 135 6.657541 GTCCAATATGAAAGAGGGTGTGTTTA 59.342 38.462 0.00 0.00 0.00 2.01
135 136 5.476945 GTCCAATATGAAAGAGGGTGTGTTT 59.523 40.000 0.00 0.00 0.00 2.83
136 137 5.010282 GTCCAATATGAAAGAGGGTGTGTT 58.990 41.667 0.00 0.00 0.00 3.32
137 138 4.289672 AGTCCAATATGAAAGAGGGTGTGT 59.710 41.667 0.00 0.00 0.00 3.72
138 139 4.848357 AGTCCAATATGAAAGAGGGTGTG 58.152 43.478 0.00 0.00 0.00 3.82
139 140 5.014123 TCAAGTCCAATATGAAAGAGGGTGT 59.986 40.000 0.00 0.00 0.00 4.16
140 141 5.500234 TCAAGTCCAATATGAAAGAGGGTG 58.500 41.667 0.00 0.00 0.00 4.61
141 142 5.779241 TCAAGTCCAATATGAAAGAGGGT 57.221 39.130 0.00 0.00 0.00 4.34
142 143 6.712547 GGTATCAAGTCCAATATGAAAGAGGG 59.287 42.308 0.00 0.00 0.00 4.30
143 144 7.282585 TGGTATCAAGTCCAATATGAAAGAGG 58.717 38.462 0.00 0.00 0.00 3.69
144 145 8.737168 TTGGTATCAAGTCCAATATGAAAGAG 57.263 34.615 0.00 0.00 38.57 2.85
145 146 8.956426 GTTTGGTATCAAGTCCAATATGAAAGA 58.044 33.333 0.00 0.00 42.25 2.52
146 147 8.190784 GGTTTGGTATCAAGTCCAATATGAAAG 58.809 37.037 7.02 0.00 42.25 2.62
189 190 4.036852 ACTGCATTAGATTCGTCTCGATCA 59.963 41.667 0.00 0.00 35.23 2.92
193 194 4.800993 AGAAACTGCATTAGATTCGTCTCG 59.199 41.667 0.00 0.00 41.56 4.04
199 200 7.810658 TGTCAGAAAGAAACTGCATTAGATTC 58.189 34.615 0.00 0.00 38.19 2.52
206 207 6.433404 AGATCAATGTCAGAAAGAAACTGCAT 59.567 34.615 0.00 0.00 35.46 3.96
215 216 5.578336 TCGTGCTAAGATCAATGTCAGAAAG 59.422 40.000 0.00 0.00 0.00 2.62
219 220 4.033358 GGTTCGTGCTAAGATCAATGTCAG 59.967 45.833 0.00 0.00 0.00 3.51
233 235 2.490991 GACTTTGTTAGGGTTCGTGCT 58.509 47.619 0.00 0.00 0.00 4.40
279 281 2.982488 AGAAATTCTGGAGGTGTGGACT 59.018 45.455 0.00 0.00 0.00 3.85
280 282 3.425162 AGAAATTCTGGAGGTGTGGAC 57.575 47.619 0.00 0.00 0.00 4.02
281 283 3.652869 AGAAGAAATTCTGGAGGTGTGGA 59.347 43.478 0.00 0.00 0.00 4.02
282 284 4.026356 AGAAGAAATTCTGGAGGTGTGG 57.974 45.455 0.00 0.00 0.00 4.17
283 285 6.094603 CCAATAGAAGAAATTCTGGAGGTGTG 59.905 42.308 0.00 0.00 32.72 3.82
284 286 6.183347 CCAATAGAAGAAATTCTGGAGGTGT 58.817 40.000 0.00 0.00 32.72 4.16
290 292 3.316308 CGCCCCAATAGAAGAAATTCTGG 59.684 47.826 0.00 0.00 32.72 3.86
294 296 2.031870 GCCGCCCCAATAGAAGAAATT 58.968 47.619 0.00 0.00 0.00 1.82
301 303 1.148273 GATGTGCCGCCCCAATAGA 59.852 57.895 0.00 0.00 0.00 1.98
303 305 2.194597 GGATGTGCCGCCCCAATA 59.805 61.111 0.00 0.00 0.00 1.90
312 314 1.747355 CTGTGATTGAAGGGATGTGCC 59.253 52.381 0.00 0.00 0.00 5.01
349 351 3.994392 CAGTATATTTGCCGGCGTTAGAT 59.006 43.478 23.90 14.20 0.00 1.98
356 358 4.261031 CCAAGTTACAGTATATTTGCCGGC 60.261 45.833 22.73 22.73 0.00 6.13
357 359 5.120399 TCCAAGTTACAGTATATTTGCCGG 58.880 41.667 0.00 0.00 0.00 6.13
368 370 5.026121 TCTCCAGATCATCCAAGTTACAGT 58.974 41.667 0.00 0.00 0.00 3.55
375 377 4.750021 TTCACTCTCCAGATCATCCAAG 57.250 45.455 0.00 0.00 0.00 3.61
387 389 1.291877 ACGCGCACATTTCACTCTCC 61.292 55.000 5.73 0.00 0.00 3.71
450 454 0.037590 TCCCAAATCTCACCAACCGG 59.962 55.000 0.00 0.00 38.77 5.28
451 455 1.812571 CTTCCCAAATCTCACCAACCG 59.187 52.381 0.00 0.00 0.00 4.44
465 469 6.649155 TCGACATTTAATCATCTTCTTCCCA 58.351 36.000 0.00 0.00 0.00 4.37
510 514 2.293122 CGGTGTGACAATGTTGGATGTT 59.707 45.455 0.00 0.00 0.00 2.71
519 523 0.322456 ACCCCATCGGTGTGACAATG 60.322 55.000 0.00 0.00 46.09 2.82
566 570 8.883731 TGATTCTTTAAATTTCGGTCTGAGATC 58.116 33.333 0.00 0.00 0.00 2.75
573 577 6.094186 AGAGCCTGATTCTTTAAATTTCGGTC 59.906 38.462 0.00 0.00 0.00 4.79
595 599 4.899502 TCTCTTCTTTTAAGCCCACAGAG 58.100 43.478 0.00 0.00 0.00 3.35
667 4477 4.913335 CAACCTTCAAGGATGGATGATG 57.087 45.455 11.59 0.00 37.67 3.07
710 4520 3.875727 GGAGAAGGACATGATGTGATGTG 59.124 47.826 1.23 0.00 36.67 3.21
711 4521 3.779183 AGGAGAAGGACATGATGTGATGT 59.221 43.478 1.23 0.00 39.34 3.06
712 4522 4.141779 TGAGGAGAAGGACATGATGTGATG 60.142 45.833 1.23 0.00 0.00 3.07
713 4523 4.035814 TGAGGAGAAGGACATGATGTGAT 58.964 43.478 1.23 0.00 0.00 3.06
714 4524 3.444029 TGAGGAGAAGGACATGATGTGA 58.556 45.455 1.23 0.00 0.00 3.58
1000 4812 2.223994 GGAGCAGGACGAGGGTAAATAC 60.224 54.545 0.00 0.00 0.00 1.89
1101 4921 4.087892 CAGGCCCTGTCACTCCGG 62.088 72.222 1.39 0.00 0.00 5.14
1102 4922 4.767255 GCAGGCCCTGTCACTCCG 62.767 72.222 13.35 0.00 33.43 4.63
1103 4923 4.767255 CGCAGGCCCTGTCACTCC 62.767 72.222 13.35 0.00 33.43 3.85
1155 4975 3.911155 GAAACGCGCTCACGGCAAG 62.911 63.158 5.73 0.00 41.91 4.01
1415 5239 5.066246 CAGGAGAAGGAATGAAGCAATTCTC 59.934 44.000 4.55 4.55 41.09 2.87
1416 5240 4.948621 CAGGAGAAGGAATGAAGCAATTCT 59.051 41.667 6.72 0.00 36.87 2.40
1445 5269 0.108615 ATCCTCCGAGTTCAACTGCG 60.109 55.000 0.00 0.00 0.00 5.18
1542 5370 8.677300 GCTTCTCACTGGAAATAATGATAAACA 58.323 33.333 0.00 0.00 0.00 2.83
1589 5417 3.067106 TCGAGTTCTGGCAAAGAATGAC 58.933 45.455 4.58 0.00 46.53 3.06
1606 5434 7.414436 TGTATTTTGTTTCTCTTTTGGTCGAG 58.586 34.615 0.00 0.00 0.00 4.04
1679 5541 6.154445 ACTTGCAGAAAAATTACTGATGCAG 58.846 36.000 10.14 0.00 42.48 4.41
1718 5580 4.162651 ACGGAGGGAGTAGGAAACTTAAA 58.837 43.478 0.00 0.00 43.67 1.52
1731 5593 6.941436 ACTACTGTATTATAAGACGGAGGGAG 59.059 42.308 22.67 15.56 31.23 4.30
1733 5595 6.489361 ACACTACTGTATTATAAGACGGAGGG 59.511 42.308 22.67 16.87 31.23 4.30
1735 5597 8.151141 TGACACTACTGTATTATAAGACGGAG 57.849 38.462 22.67 16.03 31.23 4.63
1736 5598 8.510243 TTGACACTACTGTATTATAAGACGGA 57.490 34.615 22.67 6.48 31.23 4.69
1737 5599 9.577110 TTTTGACACTACTGTATTATAAGACGG 57.423 33.333 15.87 15.87 32.91 4.79
1761 5623 8.343168 TCCATTTCATAATGTAGGACGTTTTT 57.657 30.769 0.00 0.00 39.62 1.94
1762 5624 7.067008 CCTCCATTTCATAATGTAGGACGTTTT 59.933 37.037 4.08 0.00 45.82 2.43
1763 5625 6.542370 CCTCCATTTCATAATGTAGGACGTTT 59.458 38.462 4.08 0.00 45.82 3.60
1764 5626 6.055588 CCTCCATTTCATAATGTAGGACGTT 58.944 40.000 4.08 0.00 45.82 3.99
1765 5627 5.454755 CCCTCCATTTCATAATGTAGGACGT 60.455 44.000 10.11 0.00 45.82 4.34
1766 5628 4.997395 CCCTCCATTTCATAATGTAGGACG 59.003 45.833 10.11 0.00 45.82 4.79
1767 5629 6.183361 ACTCCCTCCATTTCATAATGTAGGAC 60.183 42.308 10.11 0.00 45.82 3.85
1768 5630 5.911178 ACTCCCTCCATTTCATAATGTAGGA 59.089 40.000 10.11 6.06 45.82 2.94
1769 5631 6.192970 ACTCCCTCCATTTCATAATGTAGG 57.807 41.667 3.31 3.31 43.77 3.18
1770 5632 7.967908 ACTACTCCCTCCATTTCATAATGTAG 58.032 38.462 0.00 0.00 39.62 2.74
1771 5633 7.931015 ACTACTCCCTCCATTTCATAATGTA 57.069 36.000 0.00 0.00 39.62 2.29
1772 5634 6.831664 ACTACTCCCTCCATTTCATAATGT 57.168 37.500 0.00 0.00 39.62 2.71
1773 5635 9.224267 CATTACTACTCCCTCCATTTCATAATG 57.776 37.037 0.00 0.00 40.70 1.90
1774 5636 8.949421 ACATTACTACTCCCTCCATTTCATAAT 58.051 33.333 0.00 0.00 0.00 1.28
1775 5637 8.331931 ACATTACTACTCCCTCCATTTCATAA 57.668 34.615 0.00 0.00 0.00 1.90
1776 5638 7.931015 ACATTACTACTCCCTCCATTTCATA 57.069 36.000 0.00 0.00 0.00 2.15
1777 5639 6.831664 ACATTACTACTCCCTCCATTTCAT 57.168 37.500 0.00 0.00 0.00 2.57
1778 5640 7.743116 TTACATTACTACTCCCTCCATTTCA 57.257 36.000 0.00 0.00 0.00 2.69
1779 5641 8.044908 TGTTTACATTACTACTCCCTCCATTTC 58.955 37.037 0.00 0.00 0.00 2.17
1780 5642 7.924541 TGTTTACATTACTACTCCCTCCATTT 58.075 34.615 0.00 0.00 0.00 2.32
1781 5643 7.504926 TGTTTACATTACTACTCCCTCCATT 57.495 36.000 0.00 0.00 0.00 3.16
1782 5644 7.509546 CATGTTTACATTACTACTCCCTCCAT 58.490 38.462 0.00 0.00 33.61 3.41
1783 5645 6.631766 GCATGTTTACATTACTACTCCCTCCA 60.632 42.308 0.00 0.00 33.61 3.86
1784 5646 5.758784 GCATGTTTACATTACTACTCCCTCC 59.241 44.000 0.00 0.00 33.61 4.30
1785 5647 6.346096 TGCATGTTTACATTACTACTCCCTC 58.654 40.000 0.00 0.00 33.61 4.30
1786 5648 6.070194 ACTGCATGTTTACATTACTACTCCCT 60.070 38.462 0.00 0.00 33.61 4.20
1787 5649 6.113411 ACTGCATGTTTACATTACTACTCCC 58.887 40.000 0.00 0.00 33.61 4.30
1788 5650 7.762615 TGTACTGCATGTTTACATTACTACTCC 59.237 37.037 0.00 0.00 33.61 3.85
1789 5651 8.697846 TGTACTGCATGTTTACATTACTACTC 57.302 34.615 0.00 0.00 33.61 2.59
1790 5652 7.277981 GCTGTACTGCATGTTTACATTACTACT 59.722 37.037 18.75 0.00 33.61 2.57
1791 5653 7.064134 TGCTGTACTGCATGTTTACATTACTAC 59.936 37.037 21.93 0.00 38.12 2.73
1792 5654 7.100409 TGCTGTACTGCATGTTTACATTACTA 58.900 34.615 21.93 0.00 38.12 1.82
1793 5655 5.937540 TGCTGTACTGCATGTTTACATTACT 59.062 36.000 21.93 0.00 38.12 2.24
1794 5656 6.128282 ACTGCTGTACTGCATGTTTACATTAC 60.128 38.462 25.20 0.00 42.48 1.89
1795 5657 5.937540 ACTGCTGTACTGCATGTTTACATTA 59.062 36.000 25.20 0.96 42.48 1.90
1796 5658 4.761739 ACTGCTGTACTGCATGTTTACATT 59.238 37.500 25.20 2.75 42.48 2.71
1797 5659 4.326826 ACTGCTGTACTGCATGTTTACAT 58.673 39.130 25.20 4.12 42.48 2.29
1798 5660 3.738982 ACTGCTGTACTGCATGTTTACA 58.261 40.909 25.20 2.81 42.48 2.41
1799 5661 4.378459 GGAACTGCTGTACTGCATGTTTAC 60.378 45.833 25.20 20.31 42.48 2.01
1800 5662 3.751175 GGAACTGCTGTACTGCATGTTTA 59.249 43.478 25.20 4.18 42.48 2.01
1801 5663 2.554032 GGAACTGCTGTACTGCATGTTT 59.446 45.455 25.20 18.30 42.48 2.83
1802 5664 2.154462 GGAACTGCTGTACTGCATGTT 58.846 47.619 26.57 26.57 42.48 2.71
1803 5665 1.611673 GGGAACTGCTGTACTGCATGT 60.612 52.381 25.20 20.81 42.48 3.21
1804 5666 1.089920 GGGAACTGCTGTACTGCATG 58.910 55.000 25.20 20.27 42.48 4.06
1805 5667 0.987294 AGGGAACTGCTGTACTGCAT 59.013 50.000 25.20 13.47 42.48 3.96
1806 5668 0.321671 GAGGGAACTGCTGTACTGCA 59.678 55.000 23.80 23.80 44.43 4.41
1807 5669 0.321671 TGAGGGAACTGCTGTACTGC 59.678 55.000 17.07 17.07 44.43 4.40
1808 5670 2.839486 TTGAGGGAACTGCTGTACTG 57.161 50.000 0.00 0.00 44.43 2.74
1809 5671 3.857157 TTTTGAGGGAACTGCTGTACT 57.143 42.857 0.00 0.00 44.43 2.73
1833 5695 8.311836 TGCTCTAGTACTGCTGTATTACTTTTT 58.688 33.333 5.39 0.00 0.00 1.94
1834 5696 7.837863 TGCTCTAGTACTGCTGTATTACTTTT 58.162 34.615 5.39 0.00 0.00 2.27
1835 5697 7.339721 TCTGCTCTAGTACTGCTGTATTACTTT 59.660 37.037 5.39 0.00 0.00 2.66
1836 5698 6.829298 TCTGCTCTAGTACTGCTGTATTACTT 59.171 38.462 5.39 0.00 0.00 2.24
1837 5699 6.358178 TCTGCTCTAGTACTGCTGTATTACT 58.642 40.000 5.39 4.95 0.00 2.24
1838 5700 6.621316 TCTGCTCTAGTACTGCTGTATTAC 57.379 41.667 5.39 0.00 0.00 1.89
1839 5701 6.602009 TGTTCTGCTCTAGTACTGCTGTATTA 59.398 38.462 5.39 6.30 0.00 0.98
1840 5702 5.419155 TGTTCTGCTCTAGTACTGCTGTATT 59.581 40.000 5.39 5.41 0.00 1.89
1841 5703 4.950475 TGTTCTGCTCTAGTACTGCTGTAT 59.050 41.667 5.39 0.00 0.00 2.29
1842 5704 4.156190 GTGTTCTGCTCTAGTACTGCTGTA 59.844 45.833 5.39 0.00 0.00 2.74
1843 5705 3.057174 GTGTTCTGCTCTAGTACTGCTGT 60.057 47.826 5.39 0.66 0.00 4.40
1844 5706 3.057245 TGTGTTCTGCTCTAGTACTGCTG 60.057 47.826 5.39 4.98 0.00 4.41
1845 5707 3.157881 TGTGTTCTGCTCTAGTACTGCT 58.842 45.455 5.39 0.00 0.00 4.24
1846 5708 3.577649 TGTGTTCTGCTCTAGTACTGC 57.422 47.619 5.39 0.59 0.00 4.40
1847 5709 5.960113 AGATTGTGTTCTGCTCTAGTACTG 58.040 41.667 5.39 0.00 0.00 2.74
1848 5710 6.887545 ACTAGATTGTGTTCTGCTCTAGTACT 59.112 38.462 0.00 0.00 44.09 2.73
1905 5767 1.373497 CCTGTCCGTCAGTGCTGTC 60.373 63.158 0.00 0.00 42.19 3.51
1913 5775 3.957435 ATCCGGCTCCTGTCCGTCA 62.957 63.158 0.00 0.00 45.09 4.35
1951 6916 5.880332 TCCATAAATGCAACTAGTCAACCTC 59.120 40.000 0.00 0.00 0.00 3.85
1952 6917 5.815581 TCCATAAATGCAACTAGTCAACCT 58.184 37.500 0.00 0.00 0.00 3.50
1953 6918 6.072175 TGTTCCATAAATGCAACTAGTCAACC 60.072 38.462 0.00 0.00 0.00 3.77
1954 6919 6.908825 TGTTCCATAAATGCAACTAGTCAAC 58.091 36.000 0.00 0.00 0.00 3.18
1955 6920 6.939730 TCTGTTCCATAAATGCAACTAGTCAA 59.060 34.615 0.00 0.00 0.00 3.18
1956 6921 6.472016 TCTGTTCCATAAATGCAACTAGTCA 58.528 36.000 0.00 0.00 0.00 3.41
1960 6925 6.405731 GCCATTCTGTTCCATAAATGCAACTA 60.406 38.462 0.00 0.00 0.00 2.24
1986 6951 2.160219 TGCTGTTGCGTTTCAGATGATC 59.840 45.455 6.96 0.00 43.34 2.92
2040 7008 6.000246 TGGTTTATCATGCACAGAAGGATA 58.000 37.500 0.00 0.00 0.00 2.59
2043 7011 5.389859 TTTGGTTTATCATGCACAGAAGG 57.610 39.130 0.00 0.00 0.00 3.46
2047 7015 4.565166 CAGCATTTGGTTTATCATGCACAG 59.435 41.667 5.82 0.00 43.81 3.66
2088 7056 7.450014 TGTTCCCTGATGAGCAGTAAAATAAAA 59.550 33.333 0.00 0.00 43.33 1.52
2090 7058 6.480763 TGTTCCCTGATGAGCAGTAAAATAA 58.519 36.000 0.00 0.00 43.33 1.40
2091 7059 6.061022 TGTTCCCTGATGAGCAGTAAAATA 57.939 37.500 0.00 0.00 43.33 1.40
2092 7060 4.922206 TGTTCCCTGATGAGCAGTAAAAT 58.078 39.130 0.00 0.00 43.33 1.82
2093 7061 4.365514 TGTTCCCTGATGAGCAGTAAAA 57.634 40.909 0.00 0.00 43.33 1.52
2094 7062 4.574674 ATGTTCCCTGATGAGCAGTAAA 57.425 40.909 0.00 0.00 43.33 2.01
2095 7063 4.574674 AATGTTCCCTGATGAGCAGTAA 57.425 40.909 0.00 0.00 43.33 2.24
2096 7064 4.019411 TCAAATGTTCCCTGATGAGCAGTA 60.019 41.667 0.00 0.00 43.33 2.74
2097 7065 3.087031 CAAATGTTCCCTGATGAGCAGT 58.913 45.455 0.00 0.00 43.33 4.40
2098 7066 3.349927 TCAAATGTTCCCTGATGAGCAG 58.650 45.455 0.00 0.00 44.49 4.24
2099 7067 3.349927 CTCAAATGTTCCCTGATGAGCA 58.650 45.455 0.00 0.00 0.00 4.26
2101 7069 3.618351 AGCTCAAATGTTCCCTGATGAG 58.382 45.455 0.00 0.00 37.83 2.90
2102 7070 3.726557 AGCTCAAATGTTCCCTGATGA 57.273 42.857 0.00 0.00 0.00 2.92
2103 7071 3.119245 CCAAGCTCAAATGTTCCCTGATG 60.119 47.826 0.00 0.00 0.00 3.07
2104 7072 3.094572 CCAAGCTCAAATGTTCCCTGAT 58.905 45.455 0.00 0.00 0.00 2.90
2105 7073 2.517959 CCAAGCTCAAATGTTCCCTGA 58.482 47.619 0.00 0.00 0.00 3.86
2106 7074 1.547372 CCCAAGCTCAAATGTTCCCTG 59.453 52.381 0.00 0.00 0.00 4.45
2107 7075 1.428912 TCCCAAGCTCAAATGTTCCCT 59.571 47.619 0.00 0.00 0.00 4.20
2108 7076 1.923356 TCCCAAGCTCAAATGTTCCC 58.077 50.000 0.00 0.00 0.00 3.97
2109 7077 3.091545 TGATCCCAAGCTCAAATGTTCC 58.908 45.455 0.00 0.00 0.00 3.62
2110 7078 4.012374 TCTGATCCCAAGCTCAAATGTTC 58.988 43.478 0.00 0.00 0.00 3.18
2111 7079 4.038271 TCTGATCCCAAGCTCAAATGTT 57.962 40.909 0.00 0.00 0.00 2.71
2112 7080 3.726557 TCTGATCCCAAGCTCAAATGT 57.273 42.857 0.00 0.00 0.00 2.71
2113 7081 5.374921 AGTATCTGATCCCAAGCTCAAATG 58.625 41.667 0.00 0.00 0.00 2.32
2114 7082 5.455899 GGAGTATCTGATCCCAAGCTCAAAT 60.456 44.000 0.00 0.00 33.73 2.32
2115 7083 4.141620 GGAGTATCTGATCCCAAGCTCAAA 60.142 45.833 0.00 0.00 33.73 2.69
2116 7084 3.389329 GGAGTATCTGATCCCAAGCTCAA 59.611 47.826 0.00 0.00 33.73 3.02
2117 7085 2.968574 GGAGTATCTGATCCCAAGCTCA 59.031 50.000 0.00 0.00 33.73 4.26
2118 7086 2.968574 TGGAGTATCTGATCCCAAGCTC 59.031 50.000 0.00 0.00 34.47 4.09
2119 7087 2.703007 GTGGAGTATCTGATCCCAAGCT 59.297 50.000 0.00 0.00 34.47 3.74
2120 7088 2.546795 CGTGGAGTATCTGATCCCAAGC 60.547 54.545 0.00 0.00 34.47 4.01
2121 7089 2.695666 ACGTGGAGTATCTGATCCCAAG 59.304 50.000 13.61 13.61 34.47 3.61
2122 7090 2.693591 GACGTGGAGTATCTGATCCCAA 59.306 50.000 0.00 0.00 34.47 4.12
2123 7091 2.307768 GACGTGGAGTATCTGATCCCA 58.692 52.381 0.00 0.00 34.47 4.37
2124 7092 1.614413 GGACGTGGAGTATCTGATCCC 59.386 57.143 0.00 0.00 34.47 3.85
2125 7093 2.554893 GAGGACGTGGAGTATCTGATCC 59.445 54.545 0.00 0.00 36.05 3.36
2126 7094 3.482436 AGAGGACGTGGAGTATCTGATC 58.518 50.000 0.00 0.00 33.73 2.92
2127 7095 3.137544 AGAGAGGACGTGGAGTATCTGAT 59.862 47.826 0.00 0.00 31.41 2.90
2128 7096 2.506231 AGAGAGGACGTGGAGTATCTGA 59.494 50.000 0.00 0.00 31.41 3.27
2129 7097 2.925724 AGAGAGGACGTGGAGTATCTG 58.074 52.381 0.00 0.00 31.41 2.90
2130 7098 3.655615 AAGAGAGGACGTGGAGTATCT 57.344 47.619 0.00 0.00 33.25 1.98
2131 7099 4.399934 AGAAAAGAGAGGACGTGGAGTATC 59.600 45.833 0.00 0.00 0.00 2.24
2132 7100 4.345854 AGAAAAGAGAGGACGTGGAGTAT 58.654 43.478 0.00 0.00 0.00 2.12
2133 7101 3.764218 AGAAAAGAGAGGACGTGGAGTA 58.236 45.455 0.00 0.00 0.00 2.59
2134 7102 2.599677 AGAAAAGAGAGGACGTGGAGT 58.400 47.619 0.00 0.00 0.00 3.85
2135 7103 4.022242 TGTTAGAAAAGAGAGGACGTGGAG 60.022 45.833 0.00 0.00 0.00 3.86
2136 7104 3.893200 TGTTAGAAAAGAGAGGACGTGGA 59.107 43.478 0.00 0.00 0.00 4.02
2137 7105 4.238514 CTGTTAGAAAAGAGAGGACGTGG 58.761 47.826 0.00 0.00 0.00 4.94
2138 7106 4.238514 CCTGTTAGAAAAGAGAGGACGTG 58.761 47.826 0.00 0.00 0.00 4.49
2139 7107 3.896272 ACCTGTTAGAAAAGAGAGGACGT 59.104 43.478 0.00 0.00 0.00 4.34
2140 7108 4.522722 ACCTGTTAGAAAAGAGAGGACG 57.477 45.455 0.00 0.00 0.00 4.79
2141 7109 8.850007 AATAAACCTGTTAGAAAAGAGAGGAC 57.150 34.615 0.00 0.00 0.00 3.85
2307 7276 3.244318 TGGATGGATCATGGATGAGTTCG 60.244 47.826 0.00 0.00 40.64 3.95
2311 7280 4.569719 TCATGGATGGATCATGGATGAG 57.430 45.455 0.00 0.00 41.51 2.90
2345 7314 3.874392 TCATCGTCAGAAGCTGATCAA 57.126 42.857 0.00 0.00 42.73 2.57
2352 7321 2.030213 GCAGTTGATCATCGTCAGAAGC 59.970 50.000 0.00 0.00 0.00 3.86
2378 7347 2.223021 CGTCCAACCTGCATTGATTACG 60.223 50.000 1.52 5.25 0.00 3.18
2435 7404 3.822192 CGATCTGGCCGACGGTCA 61.822 66.667 21.85 21.85 35.34 4.02
2479 7478 2.158959 CGAACACGATGGACCGAGC 61.159 63.158 0.00 0.00 0.00 5.03
2502 7501 0.252197 GGTAGTCGTTGCTCCCCATT 59.748 55.000 0.00 0.00 0.00 3.16
2503 7502 0.617820 AGGTAGTCGTTGCTCCCCAT 60.618 55.000 0.00 0.00 0.00 4.00
2529 7528 3.452755 TCGTAGTTGGGCATGATGTAG 57.547 47.619 0.00 0.00 0.00 2.74
2539 7538 0.390735 CTCCGGGTTTCGTAGTTGGG 60.391 60.000 0.00 0.00 37.11 4.12
2623 7622 2.480419 GGCAGGGTTTTGATCGATATCG 59.520 50.000 19.14 19.14 41.45 2.92
2642 7655 0.385974 GCAAGAACACACATGACGGC 60.386 55.000 0.00 0.00 0.00 5.68
2681 7694 3.648067 AGTTGGAGAGACTTGGTCATTCA 59.352 43.478 0.52 0.00 34.60 2.57
2682 7695 3.999663 CAGTTGGAGAGACTTGGTCATTC 59.000 47.826 0.52 0.00 34.60 2.67
2683 7696 3.648067 TCAGTTGGAGAGACTTGGTCATT 59.352 43.478 0.52 0.00 34.60 2.57
2684 7697 3.242867 TCAGTTGGAGAGACTTGGTCAT 58.757 45.455 0.52 0.00 34.60 3.06
2685 7698 2.677914 TCAGTTGGAGAGACTTGGTCA 58.322 47.619 0.52 0.00 34.60 4.02
2703 7716 1.453197 CCTCTGCATGCAGCCATCA 60.453 57.895 37.48 21.89 44.83 3.07
2926 7939 0.957395 ATGAGCTTGAACAGGCGGTG 60.957 55.000 3.48 0.00 38.56 4.94
2949 7962 4.346889 TAGGAGGCAGGGTGGGCA 62.347 66.667 0.00 0.00 35.46 5.36
2988 8001 1.152030 AGTTCTGCTGGACCCTGGA 60.152 57.895 0.00 0.00 0.00 3.86
2993 8006 2.354259 CATTCTCAGTTCTGCTGGACC 58.646 52.381 0.00 0.00 45.08 4.46
2994 8007 1.736681 GCATTCTCAGTTCTGCTGGAC 59.263 52.381 0.00 0.00 45.08 4.02
2995 8008 1.673923 CGCATTCTCAGTTCTGCTGGA 60.674 52.381 0.00 0.00 45.08 3.86
2996 8009 0.725686 CGCATTCTCAGTTCTGCTGG 59.274 55.000 0.00 0.00 45.08 4.85
2997 8010 0.096628 GCGCATTCTCAGTTCTGCTG 59.903 55.000 0.30 0.00 46.34 4.41
2998 8011 0.036577 AGCGCATTCTCAGTTCTGCT 60.037 50.000 11.47 0.00 32.48 4.24
2999 8012 0.801251 AAGCGCATTCTCAGTTCTGC 59.199 50.000 11.47 0.00 0.00 4.26
3000 8013 2.344950 AGAAGCGCATTCTCAGTTCTG 58.655 47.619 11.47 0.00 45.50 3.02
3001 8014 2.758736 AGAAGCGCATTCTCAGTTCT 57.241 45.000 11.47 4.07 45.50 3.01
3014 8027 1.268386 CCATGCATGCTACAAGAAGCG 60.268 52.381 21.69 0.00 45.85 4.68
3045 8061 2.202743 ACGCATCCGTCGTCCATG 60.203 61.111 0.00 0.00 46.39 3.66
3132 8148 4.802051 GGCGGCATGAAGGGCAGA 62.802 66.667 3.07 0.00 0.00 4.26
3165 8181 1.030488 CGTCCCAGAAGAGGTAGCGA 61.030 60.000 0.00 0.00 0.00 4.93
3301 8317 2.027192 TGGTAGTTCAGATCAAGTGGCC 60.027 50.000 0.00 0.00 0.00 5.36
3309 8325 2.101582 AGTCGGCATGGTAGTTCAGATC 59.898 50.000 0.00 0.00 0.00 2.75
3317 8333 2.287668 GCTACAGTAGTCGGCATGGTAG 60.288 54.545 9.42 0.00 0.00 3.18
3323 8339 2.093075 ACTCTAGCTACAGTAGTCGGCA 60.093 50.000 9.42 0.00 0.00 5.69
3325 8341 4.947645 AGTACTCTAGCTACAGTAGTCGG 58.052 47.826 8.93 0.41 0.00 4.79
3332 8348 4.947645 ACTACGGAGTACTCTAGCTACAG 58.052 47.826 21.88 11.67 45.11 2.74
3333 8349 5.350504 AACTACGGAGTACTCTAGCTACA 57.649 43.478 21.88 1.18 45.11 2.74
3334 8350 7.961325 ATTAACTACGGAGTACTCTAGCTAC 57.039 40.000 21.88 3.82 45.11 3.58
3452 8471 6.620877 AGTACTAATTTCACTCACCATGGA 57.379 37.500 21.47 0.00 0.00 3.41
3453 8472 7.327975 TGTAGTACTAATTTCACTCACCATGG 58.672 38.462 11.19 11.19 0.00 3.66
3454 8473 8.948631 ATGTAGTACTAATTTCACTCACCATG 57.051 34.615 3.61 0.00 0.00 3.66
3465 8484 7.598759 ATCAGGACGGATGTAGTACTAATTT 57.401 36.000 3.61 0.00 30.29 1.82
3470 8489 7.434492 CAATAAATCAGGACGGATGTAGTACT 58.566 38.462 0.00 0.00 31.85 2.73
3471 8490 6.645415 CCAATAAATCAGGACGGATGTAGTAC 59.355 42.308 0.00 0.00 0.00 2.73
3472 8491 6.325545 ACCAATAAATCAGGACGGATGTAGTA 59.674 38.462 0.00 0.00 0.00 1.82
3473 8492 5.130477 ACCAATAAATCAGGACGGATGTAGT 59.870 40.000 0.00 0.00 0.00 2.73
3474 8493 5.611374 ACCAATAAATCAGGACGGATGTAG 58.389 41.667 0.00 0.00 0.00 2.74
3475 8494 5.454187 GGACCAATAAATCAGGACGGATGTA 60.454 44.000 0.00 0.00 0.00 2.29
3476 8495 4.451900 GACCAATAAATCAGGACGGATGT 58.548 43.478 0.00 0.00 0.00 3.06
3477 8496 3.815401 GGACCAATAAATCAGGACGGATG 59.185 47.826 0.00 0.00 0.00 3.51
3478 8497 3.716872 AGGACCAATAAATCAGGACGGAT 59.283 43.478 0.00 0.00 0.00 4.18
3479 8498 3.112263 AGGACCAATAAATCAGGACGGA 58.888 45.455 0.00 0.00 0.00 4.69
3480 8499 3.134804 AGAGGACCAATAAATCAGGACGG 59.865 47.826 0.00 0.00 0.00 4.79
3481 8500 4.408182 AGAGGACCAATAAATCAGGACG 57.592 45.455 0.00 0.00 0.00 4.79
3482 8501 5.745227 TGAAGAGGACCAATAAATCAGGAC 58.255 41.667 0.00 0.00 0.00 3.85
3483 8502 6.581388 ATGAAGAGGACCAATAAATCAGGA 57.419 37.500 0.00 0.00 0.00 3.86
3484 8503 8.930846 AATATGAAGAGGACCAATAAATCAGG 57.069 34.615 0.00 0.00 0.00 3.86
3490 8509 9.967451 TGTGTAAAATATGAAGAGGACCAATAA 57.033 29.630 0.00 0.00 0.00 1.40
3491 8510 9.967451 TTGTGTAAAATATGAAGAGGACCAATA 57.033 29.630 0.00 0.00 0.00 1.90
3492 8511 8.877864 TTGTGTAAAATATGAAGAGGACCAAT 57.122 30.769 0.00 0.00 0.00 3.16
3493 8512 8.698973 TTTGTGTAAAATATGAAGAGGACCAA 57.301 30.769 0.00 0.00 0.00 3.67
3494 8513 8.698973 TTTTGTGTAAAATATGAAGAGGACCA 57.301 30.769 0.00 0.00 31.13 4.02
3613 8632 9.759473 CCTCCCTCATGGTTTATTATGAAATAT 57.241 33.333 0.00 0.00 33.30 1.28
3614 8633 8.732854 ACCTCCCTCATGGTTTATTATGAAATA 58.267 33.333 0.00 0.00 33.30 1.40
3615 8634 7.595488 ACCTCCCTCATGGTTTATTATGAAAT 58.405 34.615 0.00 0.00 33.30 2.17
3616 8635 6.980577 ACCTCCCTCATGGTTTATTATGAAA 58.019 36.000 0.00 0.00 33.30 2.69
3617 8636 6.590656 ACCTCCCTCATGGTTTATTATGAA 57.409 37.500 0.00 0.00 33.30 2.57
3618 8637 6.849697 ACTACCTCCCTCATGGTTTATTATGA 59.150 38.462 0.00 0.00 37.74 2.15
3619 8638 7.079451 ACTACCTCCCTCATGGTTTATTATG 57.921 40.000 0.00 0.00 37.74 1.90
3620 8639 8.990693 ATACTACCTCCCTCATGGTTTATTAT 57.009 34.615 0.00 0.00 37.74 1.28
3621 8640 8.808240 AATACTACCTCCCTCATGGTTTATTA 57.192 34.615 0.00 0.00 37.74 0.98
3622 8641 7.707467 AATACTACCTCCCTCATGGTTTATT 57.293 36.000 0.00 0.00 37.74 1.40
3623 8642 7.707467 AAATACTACCTCCCTCATGGTTTAT 57.293 36.000 0.00 0.00 37.74 1.40
3624 8643 7.404980 AGAAAATACTACCTCCCTCATGGTTTA 59.595 37.037 0.00 0.00 37.74 2.01
3625 8644 6.217693 AGAAAATACTACCTCCCTCATGGTTT 59.782 38.462 0.00 0.00 37.74 3.27
3626 8645 5.731678 AGAAAATACTACCTCCCTCATGGTT 59.268 40.000 0.00 0.00 37.74 3.67
3627 8646 5.289510 AGAAAATACTACCTCCCTCATGGT 58.710 41.667 0.00 0.00 40.12 3.55
3628 8647 5.896073 AGAAAATACTACCTCCCTCATGG 57.104 43.478 0.00 0.00 0.00 3.66
3629 8648 7.067494 CCAAAAGAAAATACTACCTCCCTCATG 59.933 40.741 0.00 0.00 0.00 3.07
3630 8649 7.036863 TCCAAAAGAAAATACTACCTCCCTCAT 60.037 37.037 0.00 0.00 0.00 2.90
3631 8650 6.273730 TCCAAAAGAAAATACTACCTCCCTCA 59.726 38.462 0.00 0.00 0.00 3.86
3632 8651 6.718294 TCCAAAAGAAAATACTACCTCCCTC 58.282 40.000 0.00 0.00 0.00 4.30
3633 8652 6.713731 TCCAAAAGAAAATACTACCTCCCT 57.286 37.500 0.00 0.00 0.00 4.20
3634 8653 7.770366 TTTCCAAAAGAAAATACTACCTCCC 57.230 36.000 0.00 0.00 41.56 4.30
3649 8668 0.976641 GGGGGCTCCTTTTCCAAAAG 59.023 55.000 0.52 4.99 43.82 2.27
3793 8817 5.687166 AATCCTGTTTCTATCACCGGTTA 57.313 39.130 2.97 0.00 0.00 2.85
3806 8830 5.894964 GGAGTCTAGGTCTCTAATCCTGTTT 59.105 44.000 12.89 0.00 35.51 2.83
3814 8838 5.912354 ACAGGATAGGAGTCTAGGTCTCTAA 59.088 44.000 12.89 5.21 33.06 2.10
3871 8895 1.004440 GGGAGATGATAGCACGGGC 60.004 63.158 0.00 0.00 41.61 6.13
3897 8921 2.747686 CCGCTGGTTACTGGGTGT 59.252 61.111 0.00 0.00 0.00 4.16
3932 8956 3.194968 CCGTATGTGGTCCTTACTCACTT 59.805 47.826 0.00 0.00 31.73 3.16
3957 8981 1.474330 TCTTCAGAGCTACCGCATGA 58.526 50.000 0.00 0.00 39.10 3.07
4005 9029 6.317140 GCAGGAATGACATGATCTTTAACAGA 59.683 38.462 0.00 0.00 35.33 3.41
4031 9055 2.200373 ATTGCGGGCTATATGGAACC 57.800 50.000 0.00 0.00 0.00 3.62
4111 9135 4.255833 ACATTGAATCGTTGTTTGGCAT 57.744 36.364 0.00 0.00 0.00 4.40
4113 9137 5.689961 AGTTAACATTGAATCGTTGTTTGGC 59.310 36.000 8.61 0.00 35.37 4.52
4136 9160 2.229784 GCTTTCAACATTGTCCCTCCAG 59.770 50.000 0.00 0.00 0.00 3.86
4258 9282 3.907894 TCTGTTAAAACGACATTGGGC 57.092 42.857 0.00 0.00 0.00 5.36
4329 9353 2.093128 AGTTAAGGTCCCCTTGCGTATG 60.093 50.000 5.78 0.00 44.44 2.39
4362 9386 1.528129 GCCCAATTCGGAGATCCATC 58.472 55.000 0.00 0.00 36.56 3.51
4374 9398 6.071320 GGATCTAATTAACTCTGGCCCAATT 58.929 40.000 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.