Multiple sequence alignment - TraesCS7A01G318900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G318900 chr7A 100.000 2714 0 0 1 2714 459207798 459205085 0.000000e+00 5012.0
1 TraesCS7A01G318900 chr7A 96.622 977 23 9 1 975 163375307 163374339 0.000000e+00 1613.0
2 TraesCS7A01G318900 chr7A 97.479 476 11 1 2240 2714 459193600 459193125 0.000000e+00 811.0
3 TraesCS7A01G318900 chr7A 97.474 475 12 0 2240 2714 553790262 553789788 0.000000e+00 811.0
4 TraesCS7A01G318900 chr7A 95.706 326 14 0 1710 2035 459188482 459188157 2.390000e-145 525.0
5 TraesCS7A01G318900 chr1A 98.769 975 11 1 1 975 535411933 535412906 0.000000e+00 1733.0
6 TraesCS7A01G318900 chr1A 97.895 475 10 0 2240 2714 145991783 145991309 0.000000e+00 822.0
7 TraesCS7A01G318900 chr1A 97.263 475 13 0 2240 2714 4459125 4458651 0.000000e+00 806.0
8 TraesCS7A01G318900 chr5D 96.923 975 21 6 1 973 515643319 515642352 0.000000e+00 1626.0
9 TraesCS7A01G318900 chr5D 88.571 70 8 0 1334 1403 527584222 527584153 4.810000e-13 86.1
10 TraesCS7A01G318900 chr5D 88.571 70 8 0 1334 1403 527613845 527613776 4.810000e-13 86.1
11 TraesCS7A01G318900 chr1B 94.893 979 46 4 1 977 491698974 491697998 0.000000e+00 1528.0
12 TraesCS7A01G318900 chr1B 87.337 537 64 4 1704 2239 34783105 34783638 1.790000e-171 612.0
13 TraesCS7A01G318900 chr1B 87.337 537 64 4 1704 2239 34800011 34800544 1.790000e-171 612.0
14 TraesCS7A01G318900 chr4B 94.775 976 47 4 1 974 150733737 150732764 0.000000e+00 1517.0
15 TraesCS7A01G318900 chr7D 94.785 978 42 7 1 974 635392540 635393512 0.000000e+00 1515.0
16 TraesCS7A01G318900 chr7D 90.564 763 38 9 979 1713 401549087 401548331 0.000000e+00 979.0
17 TraesCS7A01G318900 chr5A 94.307 931 40 6 45 970 471513216 471514138 0.000000e+00 1413.0
18 TraesCS7A01G318900 chr5A 97.684 475 9 2 2240 2714 536733317 536733789 0.000000e+00 815.0
19 TraesCS7A01G318900 chr5A 96.687 483 16 0 2232 2714 470071762 470072244 0.000000e+00 804.0
20 TraesCS7A01G318900 chr5A 91.887 530 43 0 1710 2239 138083466 138083995 0.000000e+00 741.0
21 TraesCS7A01G318900 chr5A 91.466 539 42 4 1702 2239 173449275 173448740 0.000000e+00 737.0
22 TraesCS7A01G318900 chr5A 90.683 322 28 2 1710 2030 138088563 138088883 6.940000e-116 427.0
23 TraesCS7A01G318900 chr5A 90.214 327 30 2 1710 2035 173444169 173443844 2.500000e-115 425.0
24 TraesCS7A01G318900 chr5A 83.333 84 10 2 1110 1189 655144792 655144709 1.040000e-09 75.0
25 TraesCS7A01G318900 chr2A 92.945 978 53 7 4 975 733218632 733217665 0.000000e+00 1410.0
26 TraesCS7A01G318900 chr2A 97.474 475 12 0 2240 2714 323042165 323042639 0.000000e+00 811.0
27 TraesCS7A01G318900 chr2A 74.041 339 63 10 1252 1570 775616076 775615743 6.140000e-22 115.0
28 TraesCS7A01G318900 chr7B 91.581 974 72 10 1 970 658118138 658119105 0.000000e+00 1336.0
29 TraesCS7A01G318900 chr7B 90.123 729 24 7 998 1713 411058267 411057574 0.000000e+00 904.0
30 TraesCS7A01G318900 chr4A 97.899 476 9 1 2240 2714 561136463 561136938 0.000000e+00 822.0
31 TraesCS7A01G318900 chr4A 97.468 474 11 1 2242 2714 164655287 164654814 0.000000e+00 808.0
32 TraesCS7A01G318900 chr6D 91.908 519 42 0 1710 2228 273211970 273211452 0.000000e+00 726.0
33 TraesCS7A01G318900 chr6D 89.264 326 28 3 1710 2035 273206921 273206603 4.210000e-108 401.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G318900 chr7A 459205085 459207798 2713 True 5012 5012 100.000 1 2714 1 chr7A.!!$R4 2713
1 TraesCS7A01G318900 chr7A 163374339 163375307 968 True 1613 1613 96.622 1 975 1 chr7A.!!$R1 974
2 TraesCS7A01G318900 chr1A 535411933 535412906 973 False 1733 1733 98.769 1 975 1 chr1A.!!$F1 974
3 TraesCS7A01G318900 chr5D 515642352 515643319 967 True 1626 1626 96.923 1 973 1 chr5D.!!$R1 972
4 TraesCS7A01G318900 chr1B 491697998 491698974 976 True 1528 1528 94.893 1 977 1 chr1B.!!$R1 976
5 TraesCS7A01G318900 chr1B 34783105 34783638 533 False 612 612 87.337 1704 2239 1 chr1B.!!$F1 535
6 TraesCS7A01G318900 chr1B 34800011 34800544 533 False 612 612 87.337 1704 2239 1 chr1B.!!$F2 535
7 TraesCS7A01G318900 chr4B 150732764 150733737 973 True 1517 1517 94.775 1 974 1 chr4B.!!$R1 973
8 TraesCS7A01G318900 chr7D 635392540 635393512 972 False 1515 1515 94.785 1 974 1 chr7D.!!$F1 973
9 TraesCS7A01G318900 chr7D 401548331 401549087 756 True 979 979 90.564 979 1713 1 chr7D.!!$R1 734
10 TraesCS7A01G318900 chr5A 471513216 471514138 922 False 1413 1413 94.307 45 970 1 chr5A.!!$F4 925
11 TraesCS7A01G318900 chr5A 138083466 138083995 529 False 741 741 91.887 1710 2239 1 chr5A.!!$F1 529
12 TraesCS7A01G318900 chr5A 173448740 173449275 535 True 737 737 91.466 1702 2239 1 chr5A.!!$R2 537
13 TraesCS7A01G318900 chr2A 733217665 733218632 967 True 1410 1410 92.945 4 975 1 chr2A.!!$R1 971
14 TraesCS7A01G318900 chr7B 658118138 658119105 967 False 1336 1336 91.581 1 970 1 chr7B.!!$F1 969
15 TraesCS7A01G318900 chr7B 411057574 411058267 693 True 904 904 90.123 998 1713 1 chr7B.!!$R1 715
16 TraesCS7A01G318900 chr6D 273211452 273211970 518 True 726 726 91.908 1710 2228 1 chr6D.!!$R2 518

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
993 1015 2.231235 TCGGGTATCACCATCATCATCG 59.769 50.0 0.0 0.0 41.02 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2604 2659 0.033601 ACTCGACTGCCAGGAGATCT 60.034 55.0 0.0 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
993 1015 2.231235 TCGGGTATCACCATCATCATCG 59.769 50.000 0.00 0.00 41.02 3.84
996 1018 3.245797 GGTATCACCATCATCATCGTCG 58.754 50.000 0.00 0.00 38.42 5.12
1244 1266 0.324614 TACCACTCCTACCACGACGA 59.675 55.000 0.00 0.00 0.00 4.20
1589 1626 5.594725 TCAAGGAGCTCAACTACCAGTATAG 59.405 44.000 17.19 0.00 0.00 1.31
1590 1627 5.132043 AGGAGCTCAACTACCAGTATAGT 57.868 43.478 17.19 0.00 36.96 2.12
1591 1628 6.263412 AGGAGCTCAACTACCAGTATAGTA 57.737 41.667 17.19 0.00 34.18 1.82
1666 1716 6.006449 ACTCCACTGATTAATGAGTTGCTTT 58.994 36.000 4.67 0.00 32.61 3.51
1667 1721 6.491403 ACTCCACTGATTAATGAGTTGCTTTT 59.509 34.615 4.67 0.00 32.61 2.27
1674 1728 5.465532 TTAATGAGTTGCTTTTCATGGCA 57.534 34.783 0.00 0.00 34.43 4.92
1675 1729 4.546829 AATGAGTTGCTTTTCATGGCAT 57.453 36.364 0.00 0.00 38.30 4.40
1676 1730 5.664294 AATGAGTTGCTTTTCATGGCATA 57.336 34.783 0.00 0.00 38.30 3.14
1677 1731 5.864418 ATGAGTTGCTTTTCATGGCATAT 57.136 34.783 0.00 0.00 38.30 1.78
1678 1732 5.252969 TGAGTTGCTTTTCATGGCATATC 57.747 39.130 0.00 0.00 38.30 1.63
1679 1733 4.201940 TGAGTTGCTTTTCATGGCATATCG 60.202 41.667 0.00 0.00 38.30 2.92
1706 1760 0.905357 CGTTCAGTTCTGGGAGGGAT 59.095 55.000 0.00 0.00 0.00 3.85
1715 1769 3.706389 TCTGGGAGGGATGATGTAAGA 57.294 47.619 0.00 0.00 0.00 2.10
1732 1786 4.526650 TGTAAGAGGCACAGTTGTATCTCA 59.473 41.667 13.03 0.77 32.41 3.27
1789 1843 3.786516 TGGTAGCGATTACACGAATCA 57.213 42.857 0.00 0.00 43.76 2.57
1797 1851 5.035443 GCGATTACACGAATCAGAAGTAGT 58.965 41.667 0.00 0.00 43.76 2.73
1855 1910 3.246112 TTGGTAGCCGCCTGGTGT 61.246 61.111 6.49 0.00 37.67 4.16
1884 1939 3.497332 CGTGATCCTCTGGATACCCTAA 58.503 50.000 0.00 0.00 43.27 2.69
1911 1966 1.221021 GGGCGCCAGCTTAAGTACT 59.779 57.895 30.85 0.00 44.37 2.73
1968 2023 2.810410 AACGTAGCGTGGGTTGGGT 61.810 57.895 0.00 0.00 39.99 4.51
1976 2031 2.531685 TGGGTTGGGTCTGGAGGG 60.532 66.667 0.00 0.00 0.00 4.30
1980 2035 2.203182 TTGGGTCTGGAGGGACGT 59.797 61.111 0.00 0.00 37.12 4.34
1990 2045 1.681076 GAGGGACGTTTGGGCCTTA 59.319 57.895 4.53 0.00 0.00 2.69
1997 2052 3.013921 GACGTTTGGGCCTTAATGATGA 58.986 45.455 4.53 0.00 0.00 2.92
2005 2060 2.760092 GGCCTTAATGATGAGTTGGCAA 59.240 45.455 0.00 0.00 40.51 4.52
2119 2174 3.587061 TGCTTCTTTATCTTCCCAGGTGA 59.413 43.478 0.00 0.00 0.00 4.02
2160 2215 1.610038 CATTGGACTTGCACTTGCTCA 59.390 47.619 2.33 0.00 42.66 4.26
2181 2236 3.953712 TTCATAGCACCGTTCTTCTCA 57.046 42.857 0.00 0.00 0.00 3.27
2239 2294 1.339151 GGTCTTCTTCTTGCGGTGGAT 60.339 52.381 0.00 0.00 0.00 3.41
2240 2295 1.734465 GTCTTCTTCTTGCGGTGGATG 59.266 52.381 0.00 0.00 0.00 3.51
2241 2296 1.347707 TCTTCTTCTTGCGGTGGATGT 59.652 47.619 0.00 0.00 0.00 3.06
2242 2297 1.734465 CTTCTTCTTGCGGTGGATGTC 59.266 52.381 0.00 0.00 0.00 3.06
2243 2298 0.389817 TCTTCTTGCGGTGGATGTCG 60.390 55.000 0.00 0.00 0.00 4.35
2244 2299 0.670546 CTTCTTGCGGTGGATGTCGT 60.671 55.000 0.00 0.00 0.00 4.34
2245 2300 0.948623 TTCTTGCGGTGGATGTCGTG 60.949 55.000 0.00 0.00 0.00 4.35
2246 2301 2.358125 TTGCGGTGGATGTCGTGG 60.358 61.111 0.00 0.00 0.00 4.94
2247 2302 3.171828 TTGCGGTGGATGTCGTGGT 62.172 57.895 0.00 0.00 0.00 4.16
2248 2303 2.358247 GCGGTGGATGTCGTGGTT 60.358 61.111 0.00 0.00 0.00 3.67
2249 2304 2.388232 GCGGTGGATGTCGTGGTTC 61.388 63.158 0.00 0.00 0.00 3.62
2250 2305 1.292223 CGGTGGATGTCGTGGTTCT 59.708 57.895 0.00 0.00 0.00 3.01
2251 2306 0.528924 CGGTGGATGTCGTGGTTCTA 59.471 55.000 0.00 0.00 0.00 2.10
2252 2307 1.067425 CGGTGGATGTCGTGGTTCTAA 60.067 52.381 0.00 0.00 0.00 2.10
2253 2308 2.344025 GGTGGATGTCGTGGTTCTAAC 58.656 52.381 0.00 0.00 0.00 2.34
2254 2309 2.028385 GGTGGATGTCGTGGTTCTAACT 60.028 50.000 0.00 0.00 0.00 2.24
2255 2310 3.251571 GTGGATGTCGTGGTTCTAACTC 58.748 50.000 0.00 0.00 0.00 3.01
2256 2311 3.056749 GTGGATGTCGTGGTTCTAACTCT 60.057 47.826 0.00 0.00 0.00 3.24
2257 2312 3.056821 TGGATGTCGTGGTTCTAACTCTG 60.057 47.826 0.00 0.00 0.00 3.35
2258 2313 3.192844 GGATGTCGTGGTTCTAACTCTGA 59.807 47.826 0.00 0.00 0.00 3.27
2259 2314 3.637998 TGTCGTGGTTCTAACTCTGAC 57.362 47.619 0.00 0.24 0.00 3.51
2260 2315 2.953648 TGTCGTGGTTCTAACTCTGACA 59.046 45.455 9.09 9.09 33.14 3.58
2261 2316 3.004419 TGTCGTGGTTCTAACTCTGACAG 59.996 47.826 0.00 0.00 31.99 3.51
2262 2317 3.004524 GTCGTGGTTCTAACTCTGACAGT 59.995 47.826 1.59 0.00 36.64 3.55
2263 2318 3.004419 TCGTGGTTCTAACTCTGACAGTG 59.996 47.826 1.59 2.34 34.56 3.66
2264 2319 3.004419 CGTGGTTCTAACTCTGACAGTGA 59.996 47.826 11.37 0.00 34.56 3.41
2265 2320 4.321304 CGTGGTTCTAACTCTGACAGTGAT 60.321 45.833 11.37 2.19 34.56 3.06
2266 2321 4.926238 GTGGTTCTAACTCTGACAGTGATG 59.074 45.833 11.37 1.75 34.56 3.07
2267 2322 4.588951 TGGTTCTAACTCTGACAGTGATGT 59.411 41.667 11.37 0.31 34.56 3.06
2268 2323 5.773176 TGGTTCTAACTCTGACAGTGATGTA 59.227 40.000 11.37 0.74 34.56 2.29
2269 2324 6.071896 TGGTTCTAACTCTGACAGTGATGTAG 60.072 42.308 11.37 9.06 34.56 2.74
2270 2325 6.326375 GTTCTAACTCTGACAGTGATGTAGG 58.674 44.000 11.37 1.06 34.56 3.18
2271 2326 4.950475 TCTAACTCTGACAGTGATGTAGGG 59.050 45.833 11.37 0.00 34.56 3.53
2272 2327 2.461695 ACTCTGACAGTGATGTAGGGG 58.538 52.381 11.37 0.00 32.26 4.79
2273 2328 1.759445 CTCTGACAGTGATGTAGGGGG 59.241 57.143 1.59 0.00 0.00 5.40
2289 2344 2.861147 GGGGGTATGTATGGAGAAGC 57.139 55.000 0.00 0.00 0.00 3.86
2290 2345 2.339769 GGGGGTATGTATGGAGAAGCT 58.660 52.381 0.00 0.00 0.00 3.74
2291 2346 3.517612 GGGGGTATGTATGGAGAAGCTA 58.482 50.000 0.00 0.00 0.00 3.32
2292 2347 3.515901 GGGGGTATGTATGGAGAAGCTAG 59.484 52.174 0.00 0.00 0.00 3.42
2293 2348 4.417437 GGGGTATGTATGGAGAAGCTAGA 58.583 47.826 0.00 0.00 0.00 2.43
2294 2349 5.026790 GGGGTATGTATGGAGAAGCTAGAT 58.973 45.833 0.00 0.00 0.00 1.98
2295 2350 5.128008 GGGGTATGTATGGAGAAGCTAGATC 59.872 48.000 0.00 0.00 0.00 2.75
2296 2351 5.955355 GGGTATGTATGGAGAAGCTAGATCT 59.045 44.000 0.00 0.00 0.00 2.75
2297 2352 6.439058 GGGTATGTATGGAGAAGCTAGATCTT 59.561 42.308 0.00 0.00 0.00 2.40
2298 2353 7.616150 GGGTATGTATGGAGAAGCTAGATCTTA 59.384 40.741 0.00 0.00 0.00 2.10
2299 2354 8.682710 GGTATGTATGGAGAAGCTAGATCTTAG 58.317 40.741 0.00 0.00 0.00 2.18
2300 2355 6.582677 TGTATGGAGAAGCTAGATCTTAGC 57.417 41.667 0.00 8.24 40.67 3.09
2310 2365 5.835113 GCTAGATCTTAGCTATGGAGGAG 57.165 47.826 0.00 0.00 37.56 3.69
2311 2366 5.261216 GCTAGATCTTAGCTATGGAGGAGT 58.739 45.833 0.00 0.00 37.56 3.85
2312 2367 5.714806 GCTAGATCTTAGCTATGGAGGAGTT 59.285 44.000 0.00 0.00 37.56 3.01
2313 2368 6.350110 GCTAGATCTTAGCTATGGAGGAGTTG 60.350 46.154 0.00 0.00 37.56 3.16
2314 2369 5.463154 AGATCTTAGCTATGGAGGAGTTGT 58.537 41.667 6.78 0.00 0.00 3.32
2315 2370 6.615617 AGATCTTAGCTATGGAGGAGTTGTA 58.384 40.000 6.78 0.00 0.00 2.41
2316 2371 7.069986 AGATCTTAGCTATGGAGGAGTTGTAA 58.930 38.462 6.78 0.00 0.00 2.41
2317 2372 6.716934 TCTTAGCTATGGAGGAGTTGTAAG 57.283 41.667 6.78 0.00 0.00 2.34
2318 2373 3.828875 AGCTATGGAGGAGTTGTAAGC 57.171 47.619 0.00 0.00 0.00 3.09
2319 2374 3.107601 AGCTATGGAGGAGTTGTAAGCA 58.892 45.455 0.00 0.00 0.00 3.91
2320 2375 3.118592 AGCTATGGAGGAGTTGTAAGCAC 60.119 47.826 0.00 0.00 0.00 4.40
2321 2376 3.369471 GCTATGGAGGAGTTGTAAGCACA 60.369 47.826 0.00 0.00 0.00 4.57
2322 2377 2.543777 TGGAGGAGTTGTAAGCACAC 57.456 50.000 0.00 0.00 33.30 3.82
2323 2378 1.270094 TGGAGGAGTTGTAAGCACACG 60.270 52.381 0.00 0.00 33.30 4.49
2324 2379 1.000506 GGAGGAGTTGTAAGCACACGA 59.999 52.381 0.00 0.00 33.30 4.35
2325 2380 2.329379 GAGGAGTTGTAAGCACACGAG 58.671 52.381 0.00 0.00 33.30 4.18
2326 2381 1.000955 AGGAGTTGTAAGCACACGAGG 59.999 52.381 0.00 0.00 33.30 4.63
2327 2382 1.000506 GGAGTTGTAAGCACACGAGGA 59.999 52.381 0.00 0.00 33.30 3.71
2328 2383 2.353803 GGAGTTGTAAGCACACGAGGAT 60.354 50.000 0.00 0.00 33.30 3.24
2329 2384 3.326747 GAGTTGTAAGCACACGAGGATT 58.673 45.455 0.00 0.00 33.30 3.01
2330 2385 4.491676 GAGTTGTAAGCACACGAGGATTA 58.508 43.478 0.00 0.00 33.30 1.75
2331 2386 4.243270 AGTTGTAAGCACACGAGGATTAC 58.757 43.478 0.00 0.00 33.30 1.89
2332 2387 2.871133 TGTAAGCACACGAGGATTACG 58.129 47.619 0.00 0.00 0.00 3.18
2333 2388 2.488937 TGTAAGCACACGAGGATTACGA 59.511 45.455 0.00 0.00 34.70 3.43
2334 2389 2.279582 AAGCACACGAGGATTACGAG 57.720 50.000 0.00 0.00 34.70 4.18
2335 2390 1.174783 AGCACACGAGGATTACGAGT 58.825 50.000 0.00 0.00 35.32 4.18
2336 2391 1.544691 AGCACACGAGGATTACGAGTT 59.455 47.619 0.00 0.00 33.07 3.01
2337 2392 1.918609 GCACACGAGGATTACGAGTTC 59.081 52.381 0.00 0.00 33.07 3.01
2338 2393 2.670229 GCACACGAGGATTACGAGTTCA 60.670 50.000 0.00 0.00 33.07 3.18
2339 2394 3.172050 CACACGAGGATTACGAGTTCAG 58.828 50.000 0.00 0.00 33.07 3.02
2340 2395 2.163815 ACACGAGGATTACGAGTTCAGG 59.836 50.000 0.00 0.00 31.58 3.86
2341 2396 1.134560 ACGAGGATTACGAGTTCAGGC 59.865 52.381 0.00 0.00 34.70 4.85
2342 2397 1.536284 CGAGGATTACGAGTTCAGGCC 60.536 57.143 0.00 0.00 0.00 5.19
2343 2398 0.831307 AGGATTACGAGTTCAGGCCC 59.169 55.000 0.00 0.00 0.00 5.80
2344 2399 0.831307 GGATTACGAGTTCAGGCCCT 59.169 55.000 0.00 0.00 0.00 5.19
2345 2400 1.209747 GGATTACGAGTTCAGGCCCTT 59.790 52.381 0.00 0.00 0.00 3.95
2346 2401 2.552031 GATTACGAGTTCAGGCCCTTC 58.448 52.381 0.00 0.00 0.00 3.46
2347 2402 1.640917 TTACGAGTTCAGGCCCTTCT 58.359 50.000 0.00 0.00 0.00 2.85
2348 2403 1.183549 TACGAGTTCAGGCCCTTCTC 58.816 55.000 0.00 1.73 0.00 2.87
2349 2404 1.153745 CGAGTTCAGGCCCTTCTCG 60.154 63.158 17.87 17.87 41.02 4.04
2350 2405 1.219393 GAGTTCAGGCCCTTCTCGG 59.781 63.158 0.00 0.00 0.00 4.63
2351 2406 1.229209 AGTTCAGGCCCTTCTCGGA 60.229 57.895 0.00 0.00 33.16 4.55
2352 2407 1.219393 GTTCAGGCCCTTCTCGGAG 59.781 63.158 0.00 0.00 33.16 4.63
2353 2408 1.990060 TTCAGGCCCTTCTCGGAGG 60.990 63.158 0.00 0.00 36.52 4.30
2354 2409 2.364317 CAGGCCCTTCTCGGAGGA 60.364 66.667 0.00 0.00 39.25 3.71
2355 2410 1.990060 CAGGCCCTTCTCGGAGGAA 60.990 63.158 0.00 0.00 39.25 3.36
2356 2411 1.687493 AGGCCCTTCTCGGAGGAAG 60.687 63.158 0.00 7.54 39.25 3.46
2357 2412 1.990614 GGCCCTTCTCGGAGGAAGT 60.991 63.158 4.96 0.00 40.56 3.01
2358 2413 0.686769 GGCCCTTCTCGGAGGAAGTA 60.687 60.000 4.96 0.00 40.56 2.24
2359 2414 0.747852 GCCCTTCTCGGAGGAAGTAG 59.252 60.000 4.96 3.53 40.56 2.57
2360 2415 0.747852 CCCTTCTCGGAGGAAGTAGC 59.252 60.000 4.96 0.00 40.56 3.58
2361 2416 1.475403 CCTTCTCGGAGGAAGTAGCA 58.525 55.000 4.96 0.00 40.56 3.49
2362 2417 1.407258 CCTTCTCGGAGGAAGTAGCAG 59.593 57.143 4.96 0.00 40.56 4.24
2363 2418 0.818296 TTCTCGGAGGAAGTAGCAGC 59.182 55.000 4.96 0.00 0.00 5.25
2364 2419 1.038130 TCTCGGAGGAAGTAGCAGCC 61.038 60.000 4.96 0.00 0.00 4.85
2365 2420 2.022240 CTCGGAGGAAGTAGCAGCCC 62.022 65.000 0.00 0.00 0.00 5.19
2366 2421 2.060980 CGGAGGAAGTAGCAGCCCT 61.061 63.158 0.00 0.00 0.00 5.19
2367 2422 0.755698 CGGAGGAAGTAGCAGCCCTA 60.756 60.000 0.00 0.00 0.00 3.53
2368 2423 1.723288 GGAGGAAGTAGCAGCCCTAT 58.277 55.000 0.00 0.00 0.00 2.57
2369 2424 1.346068 GGAGGAAGTAGCAGCCCTATG 59.654 57.143 0.00 0.00 0.00 2.23
2370 2425 2.043227 GAGGAAGTAGCAGCCCTATGT 58.957 52.381 0.00 0.00 0.00 2.29
2371 2426 2.036604 GAGGAAGTAGCAGCCCTATGTC 59.963 54.545 0.00 0.00 0.00 3.06
2372 2427 2.043227 GGAAGTAGCAGCCCTATGTCT 58.957 52.381 0.00 0.00 0.00 3.41
2373 2428 2.036604 GGAAGTAGCAGCCCTATGTCTC 59.963 54.545 0.00 0.00 0.00 3.36
2374 2429 1.323412 AGTAGCAGCCCTATGTCTCG 58.677 55.000 0.00 0.00 0.00 4.04
2375 2430 0.315568 GTAGCAGCCCTATGTCTCGG 59.684 60.000 0.00 0.00 0.00 4.63
2376 2431 0.106167 TAGCAGCCCTATGTCTCGGT 60.106 55.000 0.00 0.00 0.00 4.69
2377 2432 1.227380 GCAGCCCTATGTCTCGGTG 60.227 63.158 0.00 0.00 0.00 4.94
2378 2433 1.227380 CAGCCCTATGTCTCGGTGC 60.227 63.158 0.00 0.00 0.00 5.01
2379 2434 2.109181 GCCCTATGTCTCGGTGCC 59.891 66.667 0.00 0.00 0.00 5.01
2380 2435 2.822399 CCCTATGTCTCGGTGCCC 59.178 66.667 0.00 0.00 0.00 5.36
2398 2453 3.148279 GGAGGCGGTCGACTGGAT 61.148 66.667 25.20 5.10 30.74 3.41
2399 2454 2.722201 GGAGGCGGTCGACTGGATT 61.722 63.158 25.20 3.32 30.74 3.01
2400 2455 1.389609 GGAGGCGGTCGACTGGATTA 61.390 60.000 25.20 0.00 30.74 1.75
2401 2456 0.674534 GAGGCGGTCGACTGGATTAT 59.325 55.000 25.20 0.92 30.74 1.28
2402 2457 0.389391 AGGCGGTCGACTGGATTATG 59.611 55.000 25.20 2.50 28.47 1.90
2403 2458 0.104304 GGCGGTCGACTGGATTATGT 59.896 55.000 25.20 0.00 0.00 2.29
2404 2459 1.209128 GCGGTCGACTGGATTATGTG 58.791 55.000 25.20 0.09 0.00 3.21
2405 2460 1.470979 GCGGTCGACTGGATTATGTGT 60.471 52.381 25.20 0.00 0.00 3.72
2406 2461 2.193447 CGGTCGACTGGATTATGTGTG 58.807 52.381 16.99 0.00 0.00 3.82
2407 2462 2.416836 CGGTCGACTGGATTATGTGTGT 60.417 50.000 16.99 0.00 0.00 3.72
2408 2463 3.181494 CGGTCGACTGGATTATGTGTGTA 60.181 47.826 16.99 0.00 0.00 2.90
2409 2464 4.499188 CGGTCGACTGGATTATGTGTGTAT 60.499 45.833 16.99 0.00 0.00 2.29
2410 2465 4.745125 GGTCGACTGGATTATGTGTGTATG 59.255 45.833 16.46 0.00 0.00 2.39
2411 2466 5.451381 GGTCGACTGGATTATGTGTGTATGA 60.451 44.000 16.46 0.00 0.00 2.15
2412 2467 6.040247 GTCGACTGGATTATGTGTGTATGAA 58.960 40.000 8.70 0.00 0.00 2.57
2413 2468 6.701841 GTCGACTGGATTATGTGTGTATGAAT 59.298 38.462 8.70 0.00 0.00 2.57
2414 2469 7.865889 GTCGACTGGATTATGTGTGTATGAATA 59.134 37.037 8.70 0.00 0.00 1.75
2415 2470 8.417884 TCGACTGGATTATGTGTGTATGAATAA 58.582 33.333 0.00 0.00 0.00 1.40
2416 2471 8.487970 CGACTGGATTATGTGTGTATGAATAAC 58.512 37.037 0.00 0.00 0.00 1.89
2417 2472 9.325198 GACTGGATTATGTGTGTATGAATAACA 57.675 33.333 0.00 0.00 0.00 2.41
2418 2473 9.330063 ACTGGATTATGTGTGTATGAATAACAG 57.670 33.333 0.00 0.00 0.00 3.16
2419 2474 8.675705 TGGATTATGTGTGTATGAATAACAGG 57.324 34.615 0.00 0.00 0.00 4.00
2420 2475 7.719193 TGGATTATGTGTGTATGAATAACAGGG 59.281 37.037 0.00 0.00 0.00 4.45
2421 2476 7.174946 GGATTATGTGTGTATGAATAACAGGGG 59.825 40.741 0.00 0.00 0.00 4.79
2422 2477 4.919774 TGTGTGTATGAATAACAGGGGT 57.080 40.909 0.00 0.00 0.00 4.95
2423 2478 4.584874 TGTGTGTATGAATAACAGGGGTG 58.415 43.478 0.00 0.00 0.00 4.61
2424 2479 3.377172 GTGTGTATGAATAACAGGGGTGC 59.623 47.826 0.00 0.00 0.00 5.01
2425 2480 2.612212 GTGTATGAATAACAGGGGTGCG 59.388 50.000 0.00 0.00 0.00 5.34
2426 2481 2.502130 TGTATGAATAACAGGGGTGCGA 59.498 45.455 0.00 0.00 0.00 5.10
2427 2482 2.799126 ATGAATAACAGGGGTGCGAA 57.201 45.000 0.00 0.00 0.00 4.70
2428 2483 1.816074 TGAATAACAGGGGTGCGAAC 58.184 50.000 0.00 0.00 0.00 3.95
2429 2484 1.092348 GAATAACAGGGGTGCGAACC 58.908 55.000 2.96 2.96 0.00 3.62
2437 2492 2.776659 GGGTGCGAACCCTTGATAC 58.223 57.895 25.95 0.00 46.39 2.24
2438 2493 0.252197 GGGTGCGAACCCTTGATACT 59.748 55.000 25.95 0.00 46.39 2.12
2439 2494 1.369625 GGTGCGAACCCTTGATACTG 58.630 55.000 0.00 0.00 0.00 2.74
2440 2495 1.066430 GGTGCGAACCCTTGATACTGA 60.066 52.381 0.00 0.00 0.00 3.41
2441 2496 2.271800 GTGCGAACCCTTGATACTGAG 58.728 52.381 0.00 0.00 0.00 3.35
2442 2497 1.207089 TGCGAACCCTTGATACTGAGG 59.793 52.381 0.00 0.00 0.00 3.86
2443 2498 1.480954 GCGAACCCTTGATACTGAGGA 59.519 52.381 0.00 0.00 34.91 3.71
2444 2499 2.482142 GCGAACCCTTGATACTGAGGAG 60.482 54.545 0.00 0.00 34.91 3.69
2445 2500 2.101582 CGAACCCTTGATACTGAGGAGG 59.898 54.545 0.00 0.00 34.91 4.30
2447 2502 1.428869 CCCTTGATACTGAGGAGGGG 58.571 60.000 0.00 0.00 42.73 4.79
2448 2503 1.428869 CCTTGATACTGAGGAGGGGG 58.571 60.000 0.00 0.00 34.91 5.40
2449 2504 1.344496 CCTTGATACTGAGGAGGGGGT 60.344 57.143 0.00 0.00 34.91 4.95
2450 2505 1.765314 CTTGATACTGAGGAGGGGGTG 59.235 57.143 0.00 0.00 0.00 4.61
2451 2506 1.015609 TGATACTGAGGAGGGGGTGA 58.984 55.000 0.00 0.00 0.00 4.02
2452 2507 1.343075 TGATACTGAGGAGGGGGTGAC 60.343 57.143 0.00 0.00 0.00 3.67
2453 2508 1.019650 ATACTGAGGAGGGGGTGACT 58.980 55.000 0.00 0.00 0.00 3.41
2454 2509 0.790993 TACTGAGGAGGGGGTGACTT 59.209 55.000 0.00 0.00 0.00 3.01
2455 2510 0.790993 ACTGAGGAGGGGGTGACTTA 59.209 55.000 0.00 0.00 0.00 2.24
2456 2511 1.366435 ACTGAGGAGGGGGTGACTTAT 59.634 52.381 0.00 0.00 0.00 1.73
2457 2512 2.590611 ACTGAGGAGGGGGTGACTTATA 59.409 50.000 0.00 0.00 0.00 0.98
2458 2513 3.210074 ACTGAGGAGGGGGTGACTTATAT 59.790 47.826 0.00 0.00 0.00 0.86
2459 2514 4.422592 ACTGAGGAGGGGGTGACTTATATA 59.577 45.833 0.00 0.00 0.00 0.86
2460 2515 5.011982 TGAGGAGGGGGTGACTTATATAG 57.988 47.826 0.00 0.00 0.00 1.31
2461 2516 4.673132 TGAGGAGGGGGTGACTTATATAGA 59.327 45.833 0.00 0.00 0.00 1.98
2462 2517 5.222358 TGAGGAGGGGGTGACTTATATAGAG 60.222 48.000 0.00 0.00 0.00 2.43
2463 2518 4.675550 AGGAGGGGGTGACTTATATAGAGT 59.324 45.833 0.00 0.00 0.00 3.24
2464 2519 5.138123 AGGAGGGGGTGACTTATATAGAGTT 59.862 44.000 0.00 0.00 0.00 3.01
2465 2520 5.481122 GGAGGGGGTGACTTATATAGAGTTC 59.519 48.000 0.00 0.00 0.00 3.01
2466 2521 5.078256 AGGGGGTGACTTATATAGAGTTCG 58.922 45.833 0.00 0.00 0.00 3.95
2467 2522 4.321824 GGGGGTGACTTATATAGAGTTCGC 60.322 50.000 0.00 0.00 0.00 4.70
2468 2523 4.321824 GGGGTGACTTATATAGAGTTCGCC 60.322 50.000 2.65 2.65 32.36 5.54
2469 2524 4.280174 GGGTGACTTATATAGAGTTCGCCA 59.720 45.833 10.41 0.00 31.91 5.69
2470 2525 5.462405 GGTGACTTATATAGAGTTCGCCAG 58.538 45.833 5.45 0.00 31.27 4.85
2471 2526 5.462405 GTGACTTATATAGAGTTCGCCAGG 58.538 45.833 0.00 0.00 0.00 4.45
2472 2527 4.022242 TGACTTATATAGAGTTCGCCAGGC 60.022 45.833 0.00 0.00 0.00 4.85
2473 2528 3.258622 ACTTATATAGAGTTCGCCAGGCC 59.741 47.826 5.63 0.00 0.00 5.19
2474 2529 0.977395 ATATAGAGTTCGCCAGGCCC 59.023 55.000 5.63 0.00 0.00 5.80
2475 2530 1.119574 TATAGAGTTCGCCAGGCCCC 61.120 60.000 5.63 0.00 0.00 5.80
2476 2531 2.898472 ATAGAGTTCGCCAGGCCCCT 62.898 60.000 5.63 0.00 0.00 4.79
2477 2532 4.475135 GAGTTCGCCAGGCCCCTC 62.475 72.222 5.63 4.86 0.00 4.30
2489 2544 2.368594 CCCCTCCAGCCCTCAGTA 59.631 66.667 0.00 0.00 0.00 2.74
2490 2545 1.306997 CCCCTCCAGCCCTCAGTAA 60.307 63.158 0.00 0.00 0.00 2.24
2491 2546 0.695803 CCCCTCCAGCCCTCAGTAAT 60.696 60.000 0.00 0.00 0.00 1.89
2492 2547 0.471617 CCCTCCAGCCCTCAGTAATG 59.528 60.000 0.00 0.00 0.00 1.90
2493 2548 0.179034 CCTCCAGCCCTCAGTAATGC 60.179 60.000 0.00 0.00 0.00 3.56
2494 2549 0.543277 CTCCAGCCCTCAGTAATGCA 59.457 55.000 0.00 0.00 0.00 3.96
2495 2550 0.543277 TCCAGCCCTCAGTAATGCAG 59.457 55.000 0.00 0.00 0.00 4.41
2496 2551 0.465097 CCAGCCCTCAGTAATGCAGG 60.465 60.000 0.00 2.77 0.00 4.85
2500 2555 2.514458 CCCTCAGTAATGCAGGGTTT 57.486 50.000 15.47 0.00 42.02 3.27
2501 2556 2.094675 CCCTCAGTAATGCAGGGTTTG 58.905 52.381 15.47 0.00 42.02 2.93
2502 2557 2.290896 CCCTCAGTAATGCAGGGTTTGA 60.291 50.000 15.47 0.00 42.02 2.69
2503 2558 3.420893 CCTCAGTAATGCAGGGTTTGAA 58.579 45.455 0.00 0.00 0.00 2.69
2504 2559 3.441572 CCTCAGTAATGCAGGGTTTGAAG 59.558 47.826 0.00 0.00 0.00 3.02
2505 2560 4.074970 CTCAGTAATGCAGGGTTTGAAGT 58.925 43.478 0.00 0.00 0.00 3.01
2506 2561 5.235850 TCAGTAATGCAGGGTTTGAAGTA 57.764 39.130 0.00 0.00 0.00 2.24
2507 2562 5.001232 TCAGTAATGCAGGGTTTGAAGTAC 58.999 41.667 0.00 0.00 36.37 2.73
2508 2563 4.759693 CAGTAATGCAGGGTTTGAAGTACA 59.240 41.667 0.00 0.00 38.18 2.90
2509 2564 5.415701 CAGTAATGCAGGGTTTGAAGTACAT 59.584 40.000 0.00 0.00 38.18 2.29
2510 2565 6.010219 AGTAATGCAGGGTTTGAAGTACATT 58.990 36.000 0.00 0.00 38.18 2.71
2511 2566 7.120579 CAGTAATGCAGGGTTTGAAGTACATTA 59.879 37.037 0.00 0.00 38.18 1.90
2512 2567 6.909550 AATGCAGGGTTTGAAGTACATTAA 57.090 33.333 0.00 0.00 0.00 1.40
2513 2568 5.957842 TGCAGGGTTTGAAGTACATTAAG 57.042 39.130 0.00 0.00 0.00 1.85
2514 2569 5.626142 TGCAGGGTTTGAAGTACATTAAGA 58.374 37.500 0.00 0.00 0.00 2.10
2515 2570 6.245408 TGCAGGGTTTGAAGTACATTAAGAT 58.755 36.000 0.00 0.00 0.00 2.40
2516 2571 6.719370 TGCAGGGTTTGAAGTACATTAAGATT 59.281 34.615 0.00 0.00 0.00 2.40
2517 2572 7.029563 GCAGGGTTTGAAGTACATTAAGATTG 58.970 38.462 0.00 0.00 0.00 2.67
2518 2573 7.538575 CAGGGTTTGAAGTACATTAAGATTGG 58.461 38.462 0.00 0.00 0.00 3.16
2519 2574 6.663523 AGGGTTTGAAGTACATTAAGATTGGG 59.336 38.462 0.00 0.00 0.00 4.12
2520 2575 6.127451 GGGTTTGAAGTACATTAAGATTGGGG 60.127 42.308 0.00 0.00 0.00 4.96
2521 2576 6.127451 GGTTTGAAGTACATTAAGATTGGGGG 60.127 42.308 0.00 0.00 0.00 5.40
2522 2577 5.789574 TGAAGTACATTAAGATTGGGGGT 57.210 39.130 0.00 0.00 0.00 4.95
2523 2578 6.147437 TGAAGTACATTAAGATTGGGGGTT 57.853 37.500 0.00 0.00 0.00 4.11
2524 2579 7.273457 TGAAGTACATTAAGATTGGGGGTTA 57.727 36.000 0.00 0.00 0.00 2.85
2525 2580 7.114095 TGAAGTACATTAAGATTGGGGGTTAC 58.886 38.462 0.00 0.00 0.00 2.50
2526 2581 6.903340 AGTACATTAAGATTGGGGGTTACT 57.097 37.500 0.00 0.00 0.00 2.24
2527 2582 6.659824 AGTACATTAAGATTGGGGGTTACTG 58.340 40.000 0.00 0.00 0.00 2.74
2528 2583 4.867086 ACATTAAGATTGGGGGTTACTGG 58.133 43.478 0.00 0.00 0.00 4.00
2529 2584 4.293901 ACATTAAGATTGGGGGTTACTGGT 59.706 41.667 0.00 0.00 0.00 4.00
2530 2585 5.493250 ACATTAAGATTGGGGGTTACTGGTA 59.507 40.000 0.00 0.00 0.00 3.25
2531 2586 6.011451 ACATTAAGATTGGGGGTTACTGGTAA 60.011 38.462 0.00 0.00 0.00 2.85
2532 2587 4.311520 AAGATTGGGGGTTACTGGTAAC 57.688 45.455 13.38 13.38 43.40 2.50
2533 2588 2.237893 AGATTGGGGGTTACTGGTAACG 59.762 50.000 14.78 0.00 44.67 3.18
2536 2591 4.623814 GGGTTACTGGTAACGCCC 57.376 61.111 21.92 13.55 46.69 6.13
2537 2592 1.078214 GGGTTACTGGTAACGCCCC 60.078 63.158 21.92 13.00 46.69 5.80
2538 2593 1.556373 GGGTTACTGGTAACGCCCCT 61.556 60.000 21.92 0.00 46.69 4.79
2539 2594 1.194218 GGTTACTGGTAACGCCCCTA 58.806 55.000 14.78 0.00 44.67 3.53
2540 2595 1.554617 GGTTACTGGTAACGCCCCTAA 59.445 52.381 14.78 0.00 44.67 2.69
2541 2596 2.171237 GGTTACTGGTAACGCCCCTAAT 59.829 50.000 14.78 0.00 44.67 1.73
2542 2597 3.387699 GGTTACTGGTAACGCCCCTAATA 59.612 47.826 14.78 0.00 44.67 0.98
2543 2598 4.141733 GGTTACTGGTAACGCCCCTAATAA 60.142 45.833 14.78 0.00 44.67 1.40
2544 2599 5.427378 GTTACTGGTAACGCCCCTAATAAA 58.573 41.667 7.70 0.00 36.47 1.40
2545 2600 4.146745 ACTGGTAACGCCCCTAATAAAG 57.853 45.455 0.00 0.00 42.51 1.85
2546 2601 3.520721 ACTGGTAACGCCCCTAATAAAGT 59.479 43.478 0.00 0.00 42.51 2.66
2547 2602 3.875134 CTGGTAACGCCCCTAATAAAGTG 59.125 47.826 0.00 0.00 42.51 3.16
2548 2603 2.615447 GGTAACGCCCCTAATAAAGTGC 59.385 50.000 0.00 0.00 0.00 4.40
2549 2604 2.801077 AACGCCCCTAATAAAGTGCT 57.199 45.000 0.00 0.00 0.00 4.40
2550 2605 3.918294 AACGCCCCTAATAAAGTGCTA 57.082 42.857 0.00 0.00 0.00 3.49
2551 2606 4.432980 AACGCCCCTAATAAAGTGCTAT 57.567 40.909 0.00 0.00 0.00 2.97
2552 2607 3.740115 ACGCCCCTAATAAAGTGCTATG 58.260 45.455 0.00 0.00 0.00 2.23
2553 2608 3.389983 ACGCCCCTAATAAAGTGCTATGA 59.610 43.478 0.00 0.00 0.00 2.15
2554 2609 4.041691 ACGCCCCTAATAAAGTGCTATGAT 59.958 41.667 0.00 0.00 0.00 2.45
2555 2610 4.393062 CGCCCCTAATAAAGTGCTATGATG 59.607 45.833 0.00 0.00 0.00 3.07
2556 2611 5.560724 GCCCCTAATAAAGTGCTATGATGA 58.439 41.667 0.00 0.00 0.00 2.92
2557 2612 5.412904 GCCCCTAATAAAGTGCTATGATGAC 59.587 44.000 0.00 0.00 0.00 3.06
2558 2613 5.940470 CCCCTAATAAAGTGCTATGATGACC 59.060 44.000 0.00 0.00 0.00 4.02
2559 2614 6.465751 CCCCTAATAAAGTGCTATGATGACCA 60.466 42.308 0.00 0.00 0.00 4.02
2560 2615 7.170965 CCCTAATAAAGTGCTATGATGACCAT 58.829 38.462 0.00 0.00 39.25 3.55
2561 2616 8.321353 CCCTAATAAAGTGCTATGATGACCATA 58.679 37.037 0.00 0.00 36.71 2.74
2562 2617 9.725019 CCTAATAAAGTGCTATGATGACCATAA 57.275 33.333 0.00 0.00 37.30 1.90
2566 2621 6.382869 AAGTGCTATGATGACCATAAAAGC 57.617 37.500 0.00 0.00 37.30 3.51
2567 2622 5.688807 AGTGCTATGATGACCATAAAAGCT 58.311 37.500 9.70 0.00 37.30 3.74
2568 2623 6.830912 AGTGCTATGATGACCATAAAAGCTA 58.169 36.000 0.00 0.00 37.30 3.32
2569 2624 6.708054 AGTGCTATGATGACCATAAAAGCTAC 59.292 38.462 0.00 7.38 37.30 3.58
2570 2625 6.708054 GTGCTATGATGACCATAAAAGCTACT 59.292 38.462 0.00 0.00 37.30 2.57
2571 2626 7.227512 GTGCTATGATGACCATAAAAGCTACTT 59.772 37.037 0.00 0.00 37.30 2.24
2572 2627 8.428852 TGCTATGATGACCATAAAAGCTACTTA 58.571 33.333 0.00 0.00 37.30 2.24
2573 2628 9.273016 GCTATGATGACCATAAAAGCTACTTAA 57.727 33.333 0.00 0.00 37.30 1.85
2576 2631 9.851686 ATGATGACCATAAAAGCTACTTAATGA 57.148 29.630 0.00 0.00 32.72 2.57
2577 2632 9.109393 TGATGACCATAAAAGCTACTTAATGAC 57.891 33.333 0.00 0.00 0.00 3.06
2578 2633 7.859325 TGACCATAAAAGCTACTTAATGACC 57.141 36.000 0.00 0.00 0.00 4.02
2579 2634 6.537301 TGACCATAAAAGCTACTTAATGACCG 59.463 38.462 0.00 0.00 0.00 4.79
2580 2635 6.646267 ACCATAAAAGCTACTTAATGACCGA 58.354 36.000 0.00 0.00 0.00 4.69
2581 2636 6.537660 ACCATAAAAGCTACTTAATGACCGAC 59.462 38.462 0.00 0.00 0.00 4.79
2582 2637 6.761714 CCATAAAAGCTACTTAATGACCGACT 59.238 38.462 0.00 0.00 0.00 4.18
2583 2638 7.254455 CCATAAAAGCTACTTAATGACCGACTG 60.254 40.741 0.00 0.00 0.00 3.51
2584 2639 4.803098 AAGCTACTTAATGACCGACTGT 57.197 40.909 0.00 0.00 0.00 3.55
2585 2640 4.803098 AGCTACTTAATGACCGACTGTT 57.197 40.909 0.00 0.00 0.00 3.16
2586 2641 5.148651 AGCTACTTAATGACCGACTGTTT 57.851 39.130 0.00 0.00 0.00 2.83
2587 2642 4.929808 AGCTACTTAATGACCGACTGTTTG 59.070 41.667 0.00 0.00 0.00 2.93
2588 2643 4.435651 GCTACTTAATGACCGACTGTTTGC 60.436 45.833 0.00 0.00 0.00 3.68
2589 2644 2.478894 ACTTAATGACCGACTGTTTGCG 59.521 45.455 0.00 0.00 0.00 4.85
2590 2645 2.157834 TAATGACCGACTGTTTGCGT 57.842 45.000 0.00 0.00 0.00 5.24
2591 2646 0.586319 AATGACCGACTGTTTGCGTG 59.414 50.000 0.00 0.00 0.00 5.34
2592 2647 1.841663 ATGACCGACTGTTTGCGTGC 61.842 55.000 0.00 0.00 0.00 5.34
2593 2648 2.512745 ACCGACTGTTTGCGTGCA 60.513 55.556 0.00 0.00 0.00 4.57
2594 2649 2.249309 CCGACTGTTTGCGTGCAG 59.751 61.111 0.00 0.00 38.58 4.41
2595 2650 2.249309 CGACTGTTTGCGTGCAGG 59.751 61.111 1.01 1.01 37.07 4.85
2596 2651 2.639286 GACTGTTTGCGTGCAGGG 59.361 61.111 8.72 0.00 37.07 4.45
2597 2652 3.542629 GACTGTTTGCGTGCAGGGC 62.543 63.158 8.72 5.59 37.07 5.19
2598 2653 4.688419 CTGTTTGCGTGCAGGGCG 62.688 66.667 8.72 0.00 0.00 6.13
2600 2655 4.683334 GTTTGCGTGCAGGGCGAC 62.683 66.667 8.72 4.65 0.00 5.19
2601 2656 4.927782 TTTGCGTGCAGGGCGACT 62.928 61.111 8.72 0.00 0.00 4.18
2602 2657 4.927782 TTGCGTGCAGGGCGACTT 62.928 61.111 8.72 0.00 0.00 3.01
2603 2658 4.927782 TGCGTGCAGGGCGACTTT 62.928 61.111 8.72 0.00 0.00 2.66
2604 2659 2.740826 GCGTGCAGGGCGACTTTA 60.741 61.111 8.72 0.00 0.00 1.85
2605 2660 2.740714 GCGTGCAGGGCGACTTTAG 61.741 63.158 8.72 0.00 0.00 1.85
2606 2661 1.080093 CGTGCAGGGCGACTTTAGA 60.080 57.895 0.00 0.00 0.00 2.10
2607 2662 0.460284 CGTGCAGGGCGACTTTAGAT 60.460 55.000 0.00 0.00 0.00 1.98
2608 2663 1.291132 GTGCAGGGCGACTTTAGATC 58.709 55.000 0.00 0.00 0.00 2.75
2609 2664 1.134670 GTGCAGGGCGACTTTAGATCT 60.135 52.381 0.00 0.00 0.00 2.75
2610 2665 1.137086 TGCAGGGCGACTTTAGATCTC 59.863 52.381 0.00 0.00 0.00 2.75
2611 2666 1.539280 GCAGGGCGACTTTAGATCTCC 60.539 57.143 0.00 0.00 0.00 3.71
2612 2667 2.035632 CAGGGCGACTTTAGATCTCCT 58.964 52.381 0.00 0.00 0.00 3.69
2613 2668 2.035632 AGGGCGACTTTAGATCTCCTG 58.964 52.381 0.00 0.00 0.00 3.86
2614 2669 1.069358 GGGCGACTTTAGATCTCCTGG 59.931 57.143 0.00 0.00 0.00 4.45
2615 2670 1.539280 GGCGACTTTAGATCTCCTGGC 60.539 57.143 0.00 0.00 0.00 4.85
2616 2671 1.137086 GCGACTTTAGATCTCCTGGCA 59.863 52.381 0.00 0.00 0.00 4.92
2617 2672 2.801342 GCGACTTTAGATCTCCTGGCAG 60.801 54.545 7.75 7.75 0.00 4.85
2618 2673 2.428890 CGACTTTAGATCTCCTGGCAGT 59.571 50.000 14.43 0.00 0.00 4.40
2619 2674 3.490078 CGACTTTAGATCTCCTGGCAGTC 60.490 52.174 14.43 4.15 0.00 3.51
2620 2675 2.428890 ACTTTAGATCTCCTGGCAGTCG 59.571 50.000 14.43 3.79 0.00 4.18
2621 2676 2.437085 TTAGATCTCCTGGCAGTCGA 57.563 50.000 14.43 9.50 0.00 4.20
2622 2677 1.974265 TAGATCTCCTGGCAGTCGAG 58.026 55.000 14.43 13.53 0.00 4.04
2623 2678 0.033601 AGATCTCCTGGCAGTCGAGT 60.034 55.000 14.43 4.94 0.00 4.18
2624 2679 0.102120 GATCTCCTGGCAGTCGAGTG 59.898 60.000 16.15 16.15 0.00 3.51
2625 2680 1.326213 ATCTCCTGGCAGTCGAGTGG 61.326 60.000 21.39 5.21 0.00 4.00
2626 2681 2.203640 TCCTGGCAGTCGAGTGGT 60.204 61.111 21.39 0.00 0.00 4.16
2627 2682 1.821061 CTCCTGGCAGTCGAGTGGTT 61.821 60.000 21.39 0.00 0.00 3.67
2628 2683 1.669115 CCTGGCAGTCGAGTGGTTG 60.669 63.158 21.39 0.00 0.00 3.77
2629 2684 1.669115 CTGGCAGTCGAGTGGTTGG 60.669 63.158 21.39 0.00 0.00 3.77
2630 2685 2.099652 CTGGCAGTCGAGTGGTTGGA 62.100 60.000 21.39 0.00 0.00 3.53
2631 2686 1.296715 GGCAGTCGAGTGGTTGGAT 59.703 57.895 21.39 0.00 0.00 3.41
2632 2687 0.741221 GGCAGTCGAGTGGTTGGATC 60.741 60.000 21.39 3.02 0.00 3.36
2633 2688 0.247736 GCAGTCGAGTGGTTGGATCT 59.752 55.000 21.39 0.00 0.00 2.75
2634 2689 1.338200 GCAGTCGAGTGGTTGGATCTT 60.338 52.381 21.39 0.00 0.00 2.40
2635 2690 2.341257 CAGTCGAGTGGTTGGATCTTG 58.659 52.381 12.66 0.00 0.00 3.02
2636 2691 1.276421 AGTCGAGTGGTTGGATCTTGG 59.724 52.381 0.00 0.00 0.00 3.61
2637 2692 1.002087 GTCGAGTGGTTGGATCTTGGT 59.998 52.381 0.00 0.00 0.00 3.67
2638 2693 1.275291 TCGAGTGGTTGGATCTTGGTC 59.725 52.381 0.00 0.00 0.00 4.02
2639 2694 1.726853 GAGTGGTTGGATCTTGGTCG 58.273 55.000 0.00 0.00 0.00 4.79
2640 2695 1.275291 GAGTGGTTGGATCTTGGTCGA 59.725 52.381 0.00 0.00 0.00 4.20
2641 2696 1.276421 AGTGGTTGGATCTTGGTCGAG 59.724 52.381 0.00 0.00 0.00 4.04
2642 2697 1.002087 GTGGTTGGATCTTGGTCGAGT 59.998 52.381 0.00 0.00 0.00 4.18
2643 2698 1.001974 TGGTTGGATCTTGGTCGAGTG 59.998 52.381 0.00 0.00 0.00 3.51
2644 2699 1.275291 GGTTGGATCTTGGTCGAGTGA 59.725 52.381 0.00 0.00 0.00 3.41
2645 2700 2.093447 GGTTGGATCTTGGTCGAGTGAT 60.093 50.000 0.00 0.00 0.00 3.06
2646 2701 3.600388 GTTGGATCTTGGTCGAGTGATT 58.400 45.455 0.00 0.00 0.00 2.57
2647 2702 3.251479 TGGATCTTGGTCGAGTGATTG 57.749 47.619 0.00 0.00 0.00 2.67
2648 2703 1.936547 GGATCTTGGTCGAGTGATTGC 59.063 52.381 0.00 0.00 0.00 3.56
2649 2704 2.419297 GGATCTTGGTCGAGTGATTGCT 60.419 50.000 0.00 0.00 0.00 3.91
2650 2705 2.839486 TCTTGGTCGAGTGATTGCTT 57.161 45.000 0.00 0.00 0.00 3.91
2651 2706 2.688507 TCTTGGTCGAGTGATTGCTTC 58.311 47.619 0.00 0.00 0.00 3.86
2652 2707 1.391485 CTTGGTCGAGTGATTGCTTCG 59.609 52.381 0.00 0.00 0.00 3.79
2653 2708 0.317160 TGGTCGAGTGATTGCTTCGT 59.683 50.000 0.00 0.00 0.00 3.85
2654 2709 0.716108 GGTCGAGTGATTGCTTCGTG 59.284 55.000 0.00 0.00 0.00 4.35
2655 2710 0.716108 GTCGAGTGATTGCTTCGTGG 59.284 55.000 0.00 0.00 0.00 4.94
2656 2711 0.317160 TCGAGTGATTGCTTCGTGGT 59.683 50.000 0.00 0.00 0.00 4.16
2657 2712 0.716108 CGAGTGATTGCTTCGTGGTC 59.284 55.000 0.00 0.00 0.00 4.02
2658 2713 0.716108 GAGTGATTGCTTCGTGGTCG 59.284 55.000 0.00 0.00 38.55 4.79
2659 2714 0.317160 AGTGATTGCTTCGTGGTCGA 59.683 50.000 0.00 0.00 44.66 4.20
2660 2715 0.716108 GTGATTGCTTCGTGGTCGAG 59.284 55.000 0.00 0.00 46.81 4.04
2661 2716 0.317160 TGATTGCTTCGTGGTCGAGT 59.683 50.000 0.00 0.00 46.81 4.18
2662 2717 0.716108 GATTGCTTCGTGGTCGAGTG 59.284 55.000 0.00 0.00 46.81 3.51
2663 2718 0.033504 ATTGCTTCGTGGTCGAGTGT 59.966 50.000 0.00 0.00 46.81 3.55
2664 2719 0.596600 TTGCTTCGTGGTCGAGTGTC 60.597 55.000 0.00 0.00 46.81 3.67
2665 2720 1.286260 GCTTCGTGGTCGAGTGTCT 59.714 57.895 0.00 0.00 46.81 3.41
2666 2721 0.318784 GCTTCGTGGTCGAGTGTCTT 60.319 55.000 0.00 0.00 46.81 3.01
2667 2722 1.409412 CTTCGTGGTCGAGTGTCTTG 58.591 55.000 0.00 0.00 46.81 3.02
2668 2723 1.001706 CTTCGTGGTCGAGTGTCTTGA 60.002 52.381 0.00 0.00 46.81 3.02
2669 2724 1.026584 TCGTGGTCGAGTGTCTTGAA 58.973 50.000 0.00 0.00 41.35 2.69
2670 2725 1.611977 TCGTGGTCGAGTGTCTTGAAT 59.388 47.619 0.00 0.00 41.35 2.57
2671 2726 1.986378 CGTGGTCGAGTGTCTTGAATC 59.014 52.381 0.00 0.00 39.71 2.52
2672 2727 2.338500 GTGGTCGAGTGTCTTGAATCC 58.662 52.381 0.00 0.00 0.00 3.01
2673 2728 1.067846 TGGTCGAGTGTCTTGAATCCG 60.068 52.381 0.00 0.00 0.00 4.18
2674 2729 1.067776 GGTCGAGTGTCTTGAATCCGT 60.068 52.381 0.00 0.00 0.00 4.69
2675 2730 2.251893 GTCGAGTGTCTTGAATCCGTC 58.748 52.381 0.00 0.00 0.00 4.79
2676 2731 1.135774 TCGAGTGTCTTGAATCCGTCG 60.136 52.381 0.00 0.00 0.00 5.12
2677 2732 1.135774 CGAGTGTCTTGAATCCGTCGA 60.136 52.381 0.00 0.00 0.00 4.20
2678 2733 2.520979 GAGTGTCTTGAATCCGTCGAG 58.479 52.381 0.00 0.00 38.95 4.04
2679 2734 1.887198 AGTGTCTTGAATCCGTCGAGT 59.113 47.619 0.00 0.00 38.72 4.18
2680 2735 1.986378 GTGTCTTGAATCCGTCGAGTG 59.014 52.381 0.00 0.00 38.72 3.51
2681 2736 1.067846 TGTCTTGAATCCGTCGAGTGG 60.068 52.381 0.00 0.00 38.72 4.00
2682 2737 0.530744 TCTTGAATCCGTCGAGTGGG 59.469 55.000 3.91 0.00 38.72 4.61
2683 2738 0.530744 CTTGAATCCGTCGAGTGGGA 59.469 55.000 3.91 3.23 33.48 4.37
2684 2739 1.137086 CTTGAATCCGTCGAGTGGGAT 59.863 52.381 6.74 6.74 44.83 3.85
2685 2740 2.061509 TGAATCCGTCGAGTGGGATA 57.938 50.000 11.74 0.00 42.14 2.59
2686 2741 1.679680 TGAATCCGTCGAGTGGGATAC 59.320 52.381 11.74 0.61 42.14 2.24
2702 2757 4.402056 GGATACCTCCAAGTCGATTGAA 57.598 45.455 8.56 0.00 41.83 2.69
2703 2758 4.766375 GGATACCTCCAAGTCGATTGAAA 58.234 43.478 8.56 0.00 41.83 2.69
2704 2759 4.811557 GGATACCTCCAAGTCGATTGAAAG 59.188 45.833 8.56 6.25 41.83 2.62
2705 2760 3.059352 ACCTCCAAGTCGATTGAAAGG 57.941 47.619 17.30 17.30 42.71 3.11
2706 2761 2.372172 ACCTCCAAGTCGATTGAAAGGT 59.628 45.455 18.04 18.04 43.99 3.50
2707 2762 2.744202 CCTCCAAGTCGATTGAAAGGTG 59.256 50.000 8.56 0.00 41.83 4.00
2708 2763 3.557054 CCTCCAAGTCGATTGAAAGGTGA 60.557 47.826 8.56 0.00 41.83 4.02
2709 2764 3.399330 TCCAAGTCGATTGAAAGGTGAC 58.601 45.455 8.56 0.00 41.83 3.67
2710 2765 3.071023 TCCAAGTCGATTGAAAGGTGACT 59.929 43.478 8.56 0.00 42.12 3.41
2712 2767 4.083802 CCAAGTCGATTGAAAGGTGACTTC 60.084 45.833 3.15 0.00 44.37 3.01
2713 2768 6.256440 CCAAGTCGATTGAAAGGTGACTTCT 61.256 44.000 3.15 0.00 44.37 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
347 364 9.167311 ACATTAGATTCACTCATTTGAAGTACC 57.833 33.333 0.00 0.00 38.87 3.34
977 999 3.568007 TGACGACGATGATGATGGTGATA 59.432 43.478 0.00 0.00 0.00 2.15
982 1004 2.477754 CCATTGACGACGATGATGATGG 59.522 50.000 15.50 2.76 39.55 3.51
993 1015 2.100631 CGCTGACCCCATTGACGAC 61.101 63.158 0.00 0.00 0.00 4.34
996 1018 2.438434 CCCGCTGACCCCATTGAC 60.438 66.667 0.00 0.00 0.00 3.18
1228 1250 0.675837 TCCTCGTCGTGGTAGGAGTG 60.676 60.000 12.76 0.00 34.46 3.51
1244 1266 3.764466 CGCTCGACTTGGCCTCCT 61.764 66.667 3.32 0.00 0.00 3.69
1272 1294 2.603473 AGGTACGCCAGCACCTCA 60.603 61.111 0.00 0.00 39.99 3.86
1589 1626 8.999431 TGATTGAAGGAGAAGTTTGTAATGTAC 58.001 33.333 0.00 0.00 0.00 2.90
1590 1627 9.739276 ATGATTGAAGGAGAAGTTTGTAATGTA 57.261 29.630 0.00 0.00 0.00 2.29
1591 1628 8.517878 CATGATTGAAGGAGAAGTTTGTAATGT 58.482 33.333 0.00 0.00 0.00 2.71
1679 1733 3.066342 TCCCAGAACTGAACGACGATATC 59.934 47.826 0.00 0.00 0.00 1.63
1698 1752 1.349357 GCCTCTTACATCATCCCTCCC 59.651 57.143 0.00 0.00 0.00 4.30
1706 1760 3.769739 ACAACTGTGCCTCTTACATCA 57.230 42.857 0.00 0.00 0.00 3.07
1715 1769 6.319658 CCAATATTTGAGATACAACTGTGCCT 59.680 38.462 0.00 0.00 38.29 4.75
1732 1786 5.126061 GTGAGTGAGATTGCCACCAATATTT 59.874 40.000 0.00 0.00 41.60 1.40
1789 1843 3.952967 CCGCTAGAACCCTAACTACTTCT 59.047 47.826 0.00 0.00 0.00 2.85
1797 1851 0.398098 CCTCCCCGCTAGAACCCTAA 60.398 60.000 0.00 0.00 0.00 2.69
1968 2023 2.890766 GCCCAAACGTCCCTCCAGA 61.891 63.158 0.00 0.00 0.00 3.86
1976 2031 3.013921 TCATCATTAAGGCCCAAACGTC 58.986 45.455 0.00 0.00 0.00 4.34
1980 2035 3.768757 CCAACTCATCATTAAGGCCCAAA 59.231 43.478 0.00 0.00 0.00 3.28
1990 2045 2.173519 CCCACTTGCCAACTCATCATT 58.826 47.619 0.00 0.00 0.00 2.57
1997 2052 0.611896 GCATACCCCACTTGCCAACT 60.612 55.000 0.00 0.00 0.00 3.16
2005 2060 1.274703 CCTGACCAGCATACCCCACT 61.275 60.000 0.00 0.00 0.00 4.00
2096 2151 4.228210 TCACCTGGGAAGATAAAGAAGCAT 59.772 41.667 0.00 0.00 0.00 3.79
2119 2174 1.755380 GTCTACTCCTGCGGTTGGTAT 59.245 52.381 0.00 0.00 0.00 2.73
2160 2215 4.184629 GTGAGAAGAACGGTGCTATGAAT 58.815 43.478 0.00 0.00 0.00 2.57
2181 2236 0.961857 TGCTGCAATCAAGATGGCGT 60.962 50.000 0.00 0.00 40.64 5.68
2239 2294 2.953648 TGTCAGAGTTAGAACCACGACA 59.046 45.455 0.00 0.00 0.00 4.35
2240 2295 3.004524 ACTGTCAGAGTTAGAACCACGAC 59.995 47.826 6.91 0.00 0.00 4.34
2241 2296 3.004419 CACTGTCAGAGTTAGAACCACGA 59.996 47.826 6.91 0.00 29.75 4.35
2242 2297 3.004419 TCACTGTCAGAGTTAGAACCACG 59.996 47.826 6.91 0.00 29.75 4.94
2243 2298 4.585955 TCACTGTCAGAGTTAGAACCAC 57.414 45.455 6.91 0.00 29.75 4.16
2244 2299 4.588951 ACATCACTGTCAGAGTTAGAACCA 59.411 41.667 6.91 0.00 29.75 3.67
2245 2300 5.140747 ACATCACTGTCAGAGTTAGAACC 57.859 43.478 6.91 0.00 29.75 3.62
2246 2301 6.326375 CCTACATCACTGTCAGAGTTAGAAC 58.674 44.000 6.91 0.00 36.79 3.01
2247 2302 5.419155 CCCTACATCACTGTCAGAGTTAGAA 59.581 44.000 6.91 0.00 36.79 2.10
2248 2303 4.950475 CCCTACATCACTGTCAGAGTTAGA 59.050 45.833 6.91 0.00 36.79 2.10
2249 2304 4.098654 CCCCTACATCACTGTCAGAGTTAG 59.901 50.000 6.91 2.37 36.79 2.34
2250 2305 4.023980 CCCCTACATCACTGTCAGAGTTA 58.976 47.826 6.91 0.00 36.79 2.24
2251 2306 2.834549 CCCCTACATCACTGTCAGAGTT 59.165 50.000 6.91 0.00 36.79 3.01
2252 2307 2.461695 CCCCTACATCACTGTCAGAGT 58.538 52.381 6.91 2.40 36.79 3.24
2253 2308 1.759445 CCCCCTACATCACTGTCAGAG 59.241 57.143 6.91 0.00 36.79 3.35
2254 2309 1.866015 CCCCCTACATCACTGTCAGA 58.134 55.000 6.91 0.00 36.79 3.27
2270 2325 2.339769 AGCTTCTCCATACATACCCCC 58.660 52.381 0.00 0.00 0.00 5.40
2271 2326 4.417437 TCTAGCTTCTCCATACATACCCC 58.583 47.826 0.00 0.00 0.00 4.95
2272 2327 5.955355 AGATCTAGCTTCTCCATACATACCC 59.045 44.000 0.00 0.00 0.00 3.69
2273 2328 7.475137 AAGATCTAGCTTCTCCATACATACC 57.525 40.000 0.00 0.00 0.00 2.73
2274 2329 8.188139 GCTAAGATCTAGCTTCTCCATACATAC 58.812 40.741 13.67 0.00 37.56 2.39
2275 2330 8.287439 GCTAAGATCTAGCTTCTCCATACATA 57.713 38.462 13.67 0.00 37.56 2.29
2276 2331 7.169158 GCTAAGATCTAGCTTCTCCATACAT 57.831 40.000 13.67 0.00 37.56 2.29
2277 2332 6.582677 GCTAAGATCTAGCTTCTCCATACA 57.417 41.667 13.67 0.00 37.56 2.29
2288 2343 5.261216 ACTCCTCCATAGCTAAGATCTAGC 58.739 45.833 13.28 13.28 40.67 3.42
2289 2344 6.719370 ACAACTCCTCCATAGCTAAGATCTAG 59.281 42.308 0.00 0.00 0.00 2.43
2290 2345 6.615617 ACAACTCCTCCATAGCTAAGATCTA 58.384 40.000 0.00 0.00 0.00 1.98
2291 2346 5.463154 ACAACTCCTCCATAGCTAAGATCT 58.537 41.667 0.00 0.00 0.00 2.75
2292 2347 5.799827 ACAACTCCTCCATAGCTAAGATC 57.200 43.478 0.00 0.00 0.00 2.75
2293 2348 6.239458 GCTTACAACTCCTCCATAGCTAAGAT 60.239 42.308 0.00 0.00 0.00 2.40
2294 2349 5.069251 GCTTACAACTCCTCCATAGCTAAGA 59.931 44.000 0.00 0.00 0.00 2.10
2295 2350 5.163405 TGCTTACAACTCCTCCATAGCTAAG 60.163 44.000 0.00 0.00 0.00 2.18
2296 2351 4.714802 TGCTTACAACTCCTCCATAGCTAA 59.285 41.667 0.00 0.00 0.00 3.09
2297 2352 4.099573 GTGCTTACAACTCCTCCATAGCTA 59.900 45.833 0.00 0.00 0.00 3.32
2298 2353 3.107601 TGCTTACAACTCCTCCATAGCT 58.892 45.455 0.00 0.00 0.00 3.32
2299 2354 3.198872 GTGCTTACAACTCCTCCATAGC 58.801 50.000 0.00 0.00 0.00 2.97
2300 2355 4.184629 GTGTGCTTACAACTCCTCCATAG 58.815 47.826 0.00 0.00 0.00 2.23
2301 2356 3.368013 CGTGTGCTTACAACTCCTCCATA 60.368 47.826 0.00 0.00 0.00 2.74
2302 2357 2.612972 CGTGTGCTTACAACTCCTCCAT 60.613 50.000 0.00 0.00 0.00 3.41
2303 2358 1.270094 CGTGTGCTTACAACTCCTCCA 60.270 52.381 0.00 0.00 0.00 3.86
2304 2359 1.000506 TCGTGTGCTTACAACTCCTCC 59.999 52.381 0.00 0.00 0.00 4.30
2305 2360 2.329379 CTCGTGTGCTTACAACTCCTC 58.671 52.381 0.00 0.00 0.00 3.71
2306 2361 1.000955 CCTCGTGTGCTTACAACTCCT 59.999 52.381 0.00 0.00 0.00 3.69
2307 2362 1.000506 TCCTCGTGTGCTTACAACTCC 59.999 52.381 0.00 0.00 0.00 3.85
2308 2363 2.433868 TCCTCGTGTGCTTACAACTC 57.566 50.000 0.00 0.00 0.00 3.01
2309 2364 3.402628 AATCCTCGTGTGCTTACAACT 57.597 42.857 0.00 0.00 0.00 3.16
2310 2365 3.060363 CGTAATCCTCGTGTGCTTACAAC 59.940 47.826 0.00 0.00 0.00 3.32
2311 2366 3.057386 TCGTAATCCTCGTGTGCTTACAA 60.057 43.478 0.00 0.00 0.00 2.41
2312 2367 2.488937 TCGTAATCCTCGTGTGCTTACA 59.511 45.455 0.00 0.00 0.00 2.41
2313 2368 3.106672 CTCGTAATCCTCGTGTGCTTAC 58.893 50.000 0.00 0.00 0.00 2.34
2314 2369 2.751259 ACTCGTAATCCTCGTGTGCTTA 59.249 45.455 0.00 0.00 34.58 3.09
2315 2370 1.544691 ACTCGTAATCCTCGTGTGCTT 59.455 47.619 0.00 0.00 34.58 3.91
2316 2371 1.174783 ACTCGTAATCCTCGTGTGCT 58.825 50.000 0.00 0.00 34.58 4.40
2317 2372 1.918609 GAACTCGTAATCCTCGTGTGC 59.081 52.381 0.00 0.00 35.70 4.57
2318 2373 3.172050 CTGAACTCGTAATCCTCGTGTG 58.828 50.000 0.00 0.00 35.70 3.82
2319 2374 2.163815 CCTGAACTCGTAATCCTCGTGT 59.836 50.000 0.00 0.00 36.77 4.49
2320 2375 2.798680 CCTGAACTCGTAATCCTCGTG 58.201 52.381 0.00 0.00 0.00 4.35
2321 2376 1.134560 GCCTGAACTCGTAATCCTCGT 59.865 52.381 0.00 0.00 0.00 4.18
2322 2377 1.536284 GGCCTGAACTCGTAATCCTCG 60.536 57.143 0.00 0.00 0.00 4.63
2323 2378 1.202545 GGGCCTGAACTCGTAATCCTC 60.203 57.143 0.84 0.00 0.00 3.71
2324 2379 0.831307 GGGCCTGAACTCGTAATCCT 59.169 55.000 0.84 0.00 0.00 3.24
2325 2380 0.831307 AGGGCCTGAACTCGTAATCC 59.169 55.000 4.50 0.00 0.00 3.01
2326 2381 2.168728 AGAAGGGCCTGAACTCGTAATC 59.831 50.000 6.92 0.00 0.00 1.75
2327 2382 2.168728 GAGAAGGGCCTGAACTCGTAAT 59.831 50.000 6.92 0.00 0.00 1.89
2328 2383 1.549170 GAGAAGGGCCTGAACTCGTAA 59.451 52.381 6.92 0.00 0.00 3.18
2329 2384 1.183549 GAGAAGGGCCTGAACTCGTA 58.816 55.000 6.92 0.00 0.00 3.43
2330 2385 1.878656 CGAGAAGGGCCTGAACTCGT 61.879 60.000 31.25 9.99 43.19 4.18
2331 2386 1.153745 CGAGAAGGGCCTGAACTCG 60.154 63.158 29.13 29.13 42.77 4.18
2332 2387 1.219393 CCGAGAAGGGCCTGAACTC 59.781 63.158 6.92 15.44 35.97 3.01
2333 2388 1.229209 TCCGAGAAGGGCCTGAACT 60.229 57.895 6.92 7.41 41.52 3.01
2334 2389 1.219393 CTCCGAGAAGGGCCTGAAC 59.781 63.158 6.92 1.62 41.52 3.18
2335 2390 1.990060 CCTCCGAGAAGGGCCTGAA 60.990 63.158 6.92 0.00 41.52 3.02
2336 2391 2.364317 CCTCCGAGAAGGGCCTGA 60.364 66.667 6.92 0.00 41.52 3.86
2337 2392 1.965754 CTTCCTCCGAGAAGGGCCTG 61.966 65.000 6.92 0.00 39.71 4.85
2338 2393 1.687493 CTTCCTCCGAGAAGGGCCT 60.687 63.158 0.00 0.00 39.71 5.19
2339 2394 0.686769 TACTTCCTCCGAGAAGGGCC 60.687 60.000 0.00 0.00 46.24 5.80
2340 2395 0.747852 CTACTTCCTCCGAGAAGGGC 59.252 60.000 12.46 0.00 46.24 5.19
2341 2396 0.747852 GCTACTTCCTCCGAGAAGGG 59.252 60.000 12.46 7.35 46.24 3.95
2342 2397 1.407258 CTGCTACTTCCTCCGAGAAGG 59.593 57.143 12.46 4.01 46.24 3.46
2344 2399 0.818296 GCTGCTACTTCCTCCGAGAA 59.182 55.000 0.00 0.00 0.00 2.87
2345 2400 1.038130 GGCTGCTACTTCCTCCGAGA 61.038 60.000 0.00 0.00 0.00 4.04
2346 2401 1.439644 GGCTGCTACTTCCTCCGAG 59.560 63.158 0.00 0.00 0.00 4.63
2347 2402 2.058595 GGGCTGCTACTTCCTCCGA 61.059 63.158 0.00 0.00 0.00 4.55
2348 2403 0.755698 TAGGGCTGCTACTTCCTCCG 60.756 60.000 0.00 0.00 0.00 4.63
2349 2404 1.346068 CATAGGGCTGCTACTTCCTCC 59.654 57.143 0.00 0.00 0.00 4.30
2350 2405 2.036604 GACATAGGGCTGCTACTTCCTC 59.963 54.545 0.00 0.00 0.00 3.71
2351 2406 2.043227 GACATAGGGCTGCTACTTCCT 58.957 52.381 0.00 0.00 0.00 3.36
2352 2407 2.036604 GAGACATAGGGCTGCTACTTCC 59.963 54.545 0.00 0.00 0.00 3.46
2353 2408 2.287909 CGAGACATAGGGCTGCTACTTC 60.288 54.545 0.00 0.00 0.00 3.01
2354 2409 1.683917 CGAGACATAGGGCTGCTACTT 59.316 52.381 0.00 0.00 0.00 2.24
2355 2410 1.323412 CGAGACATAGGGCTGCTACT 58.677 55.000 0.00 0.90 0.00 2.57
2356 2411 0.315568 CCGAGACATAGGGCTGCTAC 59.684 60.000 0.00 0.00 0.00 3.58
2357 2412 0.106167 ACCGAGACATAGGGCTGCTA 60.106 55.000 0.00 0.00 0.00 3.49
2358 2413 1.381872 ACCGAGACATAGGGCTGCT 60.382 57.895 0.00 0.00 0.00 4.24
2359 2414 1.227380 CACCGAGACATAGGGCTGC 60.227 63.158 0.00 0.00 0.00 5.25
2360 2415 1.227380 GCACCGAGACATAGGGCTG 60.227 63.158 0.00 0.00 0.00 4.85
2361 2416 2.435693 GGCACCGAGACATAGGGCT 61.436 63.158 0.00 0.00 0.00 5.19
2362 2417 2.109181 GGCACCGAGACATAGGGC 59.891 66.667 0.00 0.00 0.00 5.19
2363 2418 2.822399 GGGCACCGAGACATAGGG 59.178 66.667 0.00 0.00 40.86 3.53
2381 2436 1.389609 TAATCCAGTCGACCGCCTCC 61.390 60.000 13.01 0.00 0.00 4.30
2382 2437 0.674534 ATAATCCAGTCGACCGCCTC 59.325 55.000 13.01 0.00 0.00 4.70
2383 2438 0.389391 CATAATCCAGTCGACCGCCT 59.611 55.000 13.01 0.00 0.00 5.52
2384 2439 0.104304 ACATAATCCAGTCGACCGCC 59.896 55.000 13.01 0.00 0.00 6.13
2385 2440 1.209128 CACATAATCCAGTCGACCGC 58.791 55.000 13.01 0.00 0.00 5.68
2386 2441 2.193447 CACACATAATCCAGTCGACCG 58.807 52.381 13.01 0.70 0.00 4.79
2387 2442 3.247006 ACACACATAATCCAGTCGACC 57.753 47.619 13.01 0.00 0.00 4.79
2388 2443 5.588240 TCATACACACATAATCCAGTCGAC 58.412 41.667 7.70 7.70 0.00 4.20
2389 2444 5.845391 TCATACACACATAATCCAGTCGA 57.155 39.130 0.00 0.00 0.00 4.20
2390 2445 8.487970 GTTATTCATACACACATAATCCAGTCG 58.512 37.037 0.00 0.00 0.00 4.18
2391 2446 9.325198 TGTTATTCATACACACATAATCCAGTC 57.675 33.333 0.00 0.00 0.00 3.51
2392 2447 9.330063 CTGTTATTCATACACACATAATCCAGT 57.670 33.333 0.00 0.00 0.00 4.00
2393 2448 8.777413 CCTGTTATTCATACACACATAATCCAG 58.223 37.037 0.00 0.00 0.00 3.86
2394 2449 7.719193 CCCTGTTATTCATACACACATAATCCA 59.281 37.037 0.00 0.00 0.00 3.41
2395 2450 7.174946 CCCCTGTTATTCATACACACATAATCC 59.825 40.741 0.00 0.00 0.00 3.01
2396 2451 7.719633 ACCCCTGTTATTCATACACACATAATC 59.280 37.037 0.00 0.00 0.00 1.75
2397 2452 7.502226 CACCCCTGTTATTCATACACACATAAT 59.498 37.037 0.00 0.00 0.00 1.28
2398 2453 6.826231 CACCCCTGTTATTCATACACACATAA 59.174 38.462 0.00 0.00 0.00 1.90
2399 2454 6.353323 CACCCCTGTTATTCATACACACATA 58.647 40.000 0.00 0.00 0.00 2.29
2400 2455 5.192927 CACCCCTGTTATTCATACACACAT 58.807 41.667 0.00 0.00 0.00 3.21
2401 2456 4.584874 CACCCCTGTTATTCATACACACA 58.415 43.478 0.00 0.00 0.00 3.72
2402 2457 3.377172 GCACCCCTGTTATTCATACACAC 59.623 47.826 0.00 0.00 0.00 3.82
2403 2458 3.616219 GCACCCCTGTTATTCATACACA 58.384 45.455 0.00 0.00 0.00 3.72
2404 2459 2.612212 CGCACCCCTGTTATTCATACAC 59.388 50.000 0.00 0.00 0.00 2.90
2405 2460 2.502130 TCGCACCCCTGTTATTCATACA 59.498 45.455 0.00 0.00 0.00 2.29
2406 2461 3.188159 TCGCACCCCTGTTATTCATAC 57.812 47.619 0.00 0.00 0.00 2.39
2407 2462 3.537580 GTTCGCACCCCTGTTATTCATA 58.462 45.455 0.00 0.00 0.00 2.15
2408 2463 2.365582 GTTCGCACCCCTGTTATTCAT 58.634 47.619 0.00 0.00 0.00 2.57
2409 2464 1.612199 GGTTCGCACCCCTGTTATTCA 60.612 52.381 0.00 0.00 37.03 2.57
2410 2465 1.092348 GGTTCGCACCCCTGTTATTC 58.908 55.000 0.00 0.00 37.03 1.75
2411 2466 3.259592 GGTTCGCACCCCTGTTATT 57.740 52.632 0.00 0.00 37.03 1.40
2420 2475 1.066430 TCAGTATCAAGGGTTCGCACC 60.066 52.381 0.00 0.00 43.37 5.01
2421 2476 2.271800 CTCAGTATCAAGGGTTCGCAC 58.728 52.381 0.00 0.00 0.00 5.34
2422 2477 1.207089 CCTCAGTATCAAGGGTTCGCA 59.793 52.381 0.00 0.00 0.00 5.10
2423 2478 1.480954 TCCTCAGTATCAAGGGTTCGC 59.519 52.381 0.00 0.00 33.21 4.70
2424 2479 2.101582 CCTCCTCAGTATCAAGGGTTCG 59.898 54.545 0.00 0.00 33.21 3.95
2425 2480 2.436173 CCCTCCTCAGTATCAAGGGTTC 59.564 54.545 0.00 0.00 41.56 3.62
2426 2481 2.482494 CCCTCCTCAGTATCAAGGGTT 58.518 52.381 0.00 0.00 41.56 4.11
2427 2482 1.344496 CCCCTCCTCAGTATCAAGGGT 60.344 57.143 5.11 0.00 44.44 4.34
2428 2483 1.428869 CCCCTCCTCAGTATCAAGGG 58.571 60.000 0.00 0.00 45.34 3.95
2429 2484 1.344496 ACCCCCTCCTCAGTATCAAGG 60.344 57.143 0.00 0.00 0.00 3.61
2430 2485 1.765314 CACCCCCTCCTCAGTATCAAG 59.235 57.143 0.00 0.00 0.00 3.02
2431 2486 1.364678 TCACCCCCTCCTCAGTATCAA 59.635 52.381 0.00 0.00 0.00 2.57
2432 2487 1.015609 TCACCCCCTCCTCAGTATCA 58.984 55.000 0.00 0.00 0.00 2.15
2433 2488 1.062810 AGTCACCCCCTCCTCAGTATC 60.063 57.143 0.00 0.00 0.00 2.24
2434 2489 1.019650 AGTCACCCCCTCCTCAGTAT 58.980 55.000 0.00 0.00 0.00 2.12
2435 2490 0.790993 AAGTCACCCCCTCCTCAGTA 59.209 55.000 0.00 0.00 0.00 2.74
2436 2491 0.790993 TAAGTCACCCCCTCCTCAGT 59.209 55.000 0.00 0.00 0.00 3.41
2437 2492 2.182516 ATAAGTCACCCCCTCCTCAG 57.817 55.000 0.00 0.00 0.00 3.35
2438 2493 4.673132 TCTATATAAGTCACCCCCTCCTCA 59.327 45.833 0.00 0.00 0.00 3.86
2439 2494 5.222379 ACTCTATATAAGTCACCCCCTCCTC 60.222 48.000 0.00 0.00 0.00 3.71
2440 2495 4.675550 ACTCTATATAAGTCACCCCCTCCT 59.324 45.833 0.00 0.00 0.00 3.69
2441 2496 5.013258 ACTCTATATAAGTCACCCCCTCC 57.987 47.826 0.00 0.00 0.00 4.30
2442 2497 5.183522 CGAACTCTATATAAGTCACCCCCTC 59.816 48.000 0.11 0.00 0.00 4.30
2443 2498 5.078256 CGAACTCTATATAAGTCACCCCCT 58.922 45.833 0.11 0.00 0.00 4.79
2444 2499 4.321824 GCGAACTCTATATAAGTCACCCCC 60.322 50.000 0.00 0.00 0.00 5.40
2445 2500 4.321824 GGCGAACTCTATATAAGTCACCCC 60.322 50.000 0.00 0.00 0.00 4.95
2446 2501 4.280174 TGGCGAACTCTATATAAGTCACCC 59.720 45.833 0.00 0.00 0.00 4.61
2447 2502 5.449107 TGGCGAACTCTATATAAGTCACC 57.551 43.478 0.00 0.00 0.00 4.02
2448 2503 5.462405 CCTGGCGAACTCTATATAAGTCAC 58.538 45.833 0.00 0.00 0.00 3.67
2449 2504 4.022242 GCCTGGCGAACTCTATATAAGTCA 60.022 45.833 1.35 0.00 0.00 3.41
2450 2505 4.487019 GCCTGGCGAACTCTATATAAGTC 58.513 47.826 1.35 0.00 0.00 3.01
2451 2506 3.258622 GGCCTGGCGAACTCTATATAAGT 59.741 47.826 13.40 0.00 0.00 2.24
2452 2507 3.368531 GGGCCTGGCGAACTCTATATAAG 60.369 52.174 13.40 0.00 0.00 1.73
2453 2508 2.565834 GGGCCTGGCGAACTCTATATAA 59.434 50.000 13.40 0.00 0.00 0.98
2454 2509 2.176889 GGGCCTGGCGAACTCTATATA 58.823 52.381 13.40 0.00 0.00 0.86
2455 2510 0.977395 GGGCCTGGCGAACTCTATAT 59.023 55.000 13.40 0.00 0.00 0.86
2456 2511 1.119574 GGGGCCTGGCGAACTCTATA 61.120 60.000 13.40 0.00 0.00 1.31
2457 2512 2.444256 GGGGCCTGGCGAACTCTAT 61.444 63.158 13.40 0.00 0.00 1.98
2458 2513 3.081409 GGGGCCTGGCGAACTCTA 61.081 66.667 13.40 0.00 0.00 2.43
2460 2515 4.475135 GAGGGGCCTGGCGAACTC 62.475 72.222 13.40 15.25 0.00 3.01
2472 2527 0.695803 ATTACTGAGGGCTGGAGGGG 60.696 60.000 0.00 0.00 0.00 4.79
2473 2528 0.471617 CATTACTGAGGGCTGGAGGG 59.528 60.000 0.00 0.00 0.00 4.30
2474 2529 0.179034 GCATTACTGAGGGCTGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
2475 2530 0.543277 TGCATTACTGAGGGCTGGAG 59.457 55.000 0.00 0.00 0.00 3.86
2476 2531 0.543277 CTGCATTACTGAGGGCTGGA 59.457 55.000 0.00 0.00 0.00 3.86
2477 2532 0.465097 CCTGCATTACTGAGGGCTGG 60.465 60.000 0.00 0.00 38.67 4.85
2478 2533 0.465097 CCCTGCATTACTGAGGGCTG 60.465 60.000 0.00 0.00 40.22 4.85
2479 2534 1.918253 CCCTGCATTACTGAGGGCT 59.082 57.895 0.00 0.00 40.22 5.19
2480 2535 4.567318 CCCTGCATTACTGAGGGC 57.433 61.111 0.00 0.00 40.22 5.19
2482 2537 3.071874 TCAAACCCTGCATTACTGAGG 57.928 47.619 0.00 0.00 0.00 3.86
2483 2538 4.074970 ACTTCAAACCCTGCATTACTGAG 58.925 43.478 0.00 0.00 0.00 3.35
2484 2539 4.098914 ACTTCAAACCCTGCATTACTGA 57.901 40.909 0.00 0.00 0.00 3.41
2485 2540 4.759693 TGTACTTCAAACCCTGCATTACTG 59.240 41.667 0.00 0.00 0.00 2.74
2486 2541 4.980573 TGTACTTCAAACCCTGCATTACT 58.019 39.130 0.00 0.00 0.00 2.24
2487 2542 5.897377 ATGTACTTCAAACCCTGCATTAC 57.103 39.130 0.00 0.00 0.00 1.89
2488 2543 7.885922 TCTTAATGTACTTCAAACCCTGCATTA 59.114 33.333 0.00 0.00 0.00 1.90
2489 2544 6.719370 TCTTAATGTACTTCAAACCCTGCATT 59.281 34.615 0.00 0.00 0.00 3.56
2490 2545 6.245408 TCTTAATGTACTTCAAACCCTGCAT 58.755 36.000 0.00 0.00 0.00 3.96
2491 2546 5.626142 TCTTAATGTACTTCAAACCCTGCA 58.374 37.500 0.00 0.00 0.00 4.41
2492 2547 6.759497 ATCTTAATGTACTTCAAACCCTGC 57.241 37.500 0.00 0.00 0.00 4.85
2493 2548 7.362920 CCCAATCTTAATGTACTTCAAACCCTG 60.363 40.741 0.00 0.00 0.00 4.45
2494 2549 6.663523 CCCAATCTTAATGTACTTCAAACCCT 59.336 38.462 0.00 0.00 0.00 4.34
2495 2550 6.127451 CCCCAATCTTAATGTACTTCAAACCC 60.127 42.308 0.00 0.00 0.00 4.11
2496 2551 6.127451 CCCCCAATCTTAATGTACTTCAAACC 60.127 42.308 0.00 0.00 0.00 3.27
2497 2552 6.436218 ACCCCCAATCTTAATGTACTTCAAAC 59.564 38.462 0.00 0.00 0.00 2.93
2498 2553 6.557568 ACCCCCAATCTTAATGTACTTCAAA 58.442 36.000 0.00 0.00 0.00 2.69
2499 2554 6.147437 ACCCCCAATCTTAATGTACTTCAA 57.853 37.500 0.00 0.00 0.00 2.69
2500 2555 5.789574 ACCCCCAATCTTAATGTACTTCA 57.210 39.130 0.00 0.00 0.00 3.02
2501 2556 7.282450 CAGTAACCCCCAATCTTAATGTACTTC 59.718 40.741 0.00 0.00 0.00 3.01
2502 2557 7.116736 CAGTAACCCCCAATCTTAATGTACTT 58.883 38.462 0.00 0.00 0.00 2.24
2503 2558 6.353602 CCAGTAACCCCCAATCTTAATGTACT 60.354 42.308 0.00 0.00 0.00 2.73
2504 2559 5.826208 CCAGTAACCCCCAATCTTAATGTAC 59.174 44.000 0.00 0.00 0.00 2.90
2505 2560 5.493250 ACCAGTAACCCCCAATCTTAATGTA 59.507 40.000 0.00 0.00 0.00 2.29
2506 2561 4.293901 ACCAGTAACCCCCAATCTTAATGT 59.706 41.667 0.00 0.00 0.00 2.71
2507 2562 4.867086 ACCAGTAACCCCCAATCTTAATG 58.133 43.478 0.00 0.00 0.00 1.90
2508 2563 6.429151 GTTACCAGTAACCCCCAATCTTAAT 58.571 40.000 9.14 0.00 39.48 1.40
2509 2564 5.571251 CGTTACCAGTAACCCCCAATCTTAA 60.571 44.000 13.61 0.00 41.66 1.85
2510 2565 4.080975 CGTTACCAGTAACCCCCAATCTTA 60.081 45.833 13.61 0.00 41.66 2.10
2511 2566 3.307904 CGTTACCAGTAACCCCCAATCTT 60.308 47.826 13.61 0.00 41.66 2.40
2512 2567 2.237893 CGTTACCAGTAACCCCCAATCT 59.762 50.000 13.61 0.00 41.66 2.40
2513 2568 2.635714 CGTTACCAGTAACCCCCAATC 58.364 52.381 13.61 0.00 41.66 2.67
2514 2569 1.340308 GCGTTACCAGTAACCCCCAAT 60.340 52.381 13.61 0.00 41.66 3.16
2515 2570 0.036590 GCGTTACCAGTAACCCCCAA 59.963 55.000 13.61 0.00 41.66 4.12
2516 2571 1.678724 GCGTTACCAGTAACCCCCA 59.321 57.895 13.61 0.00 41.66 4.96
2517 2572 1.078214 GGCGTTACCAGTAACCCCC 60.078 63.158 13.61 10.79 41.66 5.40
2518 2573 1.078214 GGGCGTTACCAGTAACCCC 60.078 63.158 21.39 21.39 43.05 4.95
2519 2574 1.078214 GGGGCGTTACCAGTAACCC 60.078 63.158 13.61 14.26 41.66 4.11
2520 2575 1.194218 TAGGGGCGTTACCAGTAACC 58.806 55.000 13.61 7.56 41.66 2.85
2521 2576 3.548745 ATTAGGGGCGTTACCAGTAAC 57.451 47.619 10.09 10.09 42.05 2.50
2522 2577 5.189539 ACTTTATTAGGGGCGTTACCAGTAA 59.810 40.000 0.00 0.00 42.05 2.24
2523 2578 4.716287 ACTTTATTAGGGGCGTTACCAGTA 59.284 41.667 0.00 0.00 42.05 2.74
2524 2579 3.520721 ACTTTATTAGGGGCGTTACCAGT 59.479 43.478 0.00 0.00 42.05 4.00
2525 2580 3.875134 CACTTTATTAGGGGCGTTACCAG 59.125 47.826 0.00 0.00 42.05 4.00
2526 2581 3.876341 CACTTTATTAGGGGCGTTACCA 58.124 45.455 0.00 0.00 42.05 3.25
2527 2582 2.615447 GCACTTTATTAGGGGCGTTACC 59.385 50.000 0.00 0.00 37.93 2.85
2528 2583 3.538591 AGCACTTTATTAGGGGCGTTAC 58.461 45.455 0.00 0.00 34.57 2.50
2529 2584 3.918294 AGCACTTTATTAGGGGCGTTA 57.082 42.857 0.00 0.00 34.57 3.18
2530 2585 2.801077 AGCACTTTATTAGGGGCGTT 57.199 45.000 0.00 0.00 34.57 4.84
2531 2586 3.389983 TCATAGCACTTTATTAGGGGCGT 59.610 43.478 0.00 0.00 34.57 5.68
2532 2587 4.002906 TCATAGCACTTTATTAGGGGCG 57.997 45.455 0.00 0.00 34.57 6.13
2533 2588 5.412904 GTCATCATAGCACTTTATTAGGGGC 59.587 44.000 0.00 0.00 0.00 5.80
2534 2589 5.940470 GGTCATCATAGCACTTTATTAGGGG 59.060 44.000 0.00 0.00 0.00 4.79
2535 2590 6.533730 TGGTCATCATAGCACTTTATTAGGG 58.466 40.000 0.00 0.00 0.00 3.53
2536 2591 9.725019 TTATGGTCATCATAGCACTTTATTAGG 57.275 33.333 0.00 0.00 39.29 2.69
2540 2595 8.571336 GCTTTTATGGTCATCATAGCACTTTAT 58.429 33.333 0.00 0.00 39.29 1.40
2541 2596 7.775093 AGCTTTTATGGTCATCATAGCACTTTA 59.225 33.333 9.16 0.00 39.29 1.85
2542 2597 6.604795 AGCTTTTATGGTCATCATAGCACTTT 59.395 34.615 9.16 0.00 39.29 2.66
2543 2598 6.125029 AGCTTTTATGGTCATCATAGCACTT 58.875 36.000 9.16 0.00 39.29 3.16
2544 2599 5.688807 AGCTTTTATGGTCATCATAGCACT 58.311 37.500 9.16 0.00 39.29 4.40
2545 2600 6.708054 AGTAGCTTTTATGGTCATCATAGCAC 59.292 38.462 0.00 6.36 39.29 4.40
2546 2601 6.830912 AGTAGCTTTTATGGTCATCATAGCA 58.169 36.000 0.00 0.00 39.29 3.49
2547 2602 7.736447 AAGTAGCTTTTATGGTCATCATAGC 57.264 36.000 0.00 0.00 39.29 2.97
2550 2605 9.851686 TCATTAAGTAGCTTTTATGGTCATCAT 57.148 29.630 0.00 0.00 39.78 2.45
2551 2606 9.109393 GTCATTAAGTAGCTTTTATGGTCATCA 57.891 33.333 0.00 0.00 0.00 3.07
2552 2607 8.560374 GGTCATTAAGTAGCTTTTATGGTCATC 58.440 37.037 0.00 0.00 0.00 2.92
2553 2608 7.226720 CGGTCATTAAGTAGCTTTTATGGTCAT 59.773 37.037 0.00 0.00 0.00 3.06
2554 2609 6.537301 CGGTCATTAAGTAGCTTTTATGGTCA 59.463 38.462 0.00 0.00 0.00 4.02
2555 2610 6.759827 TCGGTCATTAAGTAGCTTTTATGGTC 59.240 38.462 0.00 0.00 0.00 4.02
2556 2611 6.537660 GTCGGTCATTAAGTAGCTTTTATGGT 59.462 38.462 0.00 0.00 0.00 3.55
2557 2612 6.761714 AGTCGGTCATTAAGTAGCTTTTATGG 59.238 38.462 0.00 0.00 0.00 2.74
2558 2613 7.277981 ACAGTCGGTCATTAAGTAGCTTTTATG 59.722 37.037 0.00 0.00 0.00 1.90
2559 2614 7.328737 ACAGTCGGTCATTAAGTAGCTTTTAT 58.671 34.615 0.00 0.00 0.00 1.40
2560 2615 6.694447 ACAGTCGGTCATTAAGTAGCTTTTA 58.306 36.000 0.00 0.00 0.00 1.52
2561 2616 5.548406 ACAGTCGGTCATTAAGTAGCTTTT 58.452 37.500 0.00 0.00 0.00 2.27
2562 2617 5.148651 ACAGTCGGTCATTAAGTAGCTTT 57.851 39.130 0.00 0.00 0.00 3.51
2563 2618 4.803098 ACAGTCGGTCATTAAGTAGCTT 57.197 40.909 0.00 0.00 0.00 3.74
2564 2619 4.803098 AACAGTCGGTCATTAAGTAGCT 57.197 40.909 0.00 0.00 0.00 3.32
2565 2620 4.435651 GCAAACAGTCGGTCATTAAGTAGC 60.436 45.833 0.00 0.00 0.00 3.58
2566 2621 4.201589 CGCAAACAGTCGGTCATTAAGTAG 60.202 45.833 0.00 0.00 0.00 2.57
2567 2622 3.676172 CGCAAACAGTCGGTCATTAAGTA 59.324 43.478 0.00 0.00 0.00 2.24
2568 2623 2.478894 CGCAAACAGTCGGTCATTAAGT 59.521 45.455 0.00 0.00 0.00 2.24
2569 2624 2.478894 ACGCAAACAGTCGGTCATTAAG 59.521 45.455 0.00 0.00 0.00 1.85
2570 2625 2.222213 CACGCAAACAGTCGGTCATTAA 59.778 45.455 0.00 0.00 0.00 1.40
2571 2626 1.795872 CACGCAAACAGTCGGTCATTA 59.204 47.619 0.00 0.00 0.00 1.90
2572 2627 0.586319 CACGCAAACAGTCGGTCATT 59.414 50.000 0.00 0.00 0.00 2.57
2573 2628 1.841663 GCACGCAAACAGTCGGTCAT 61.842 55.000 0.00 0.00 0.00 3.06
2574 2629 2.530497 GCACGCAAACAGTCGGTCA 61.530 57.895 0.00 0.00 0.00 4.02
2575 2630 2.248431 GCACGCAAACAGTCGGTC 59.752 61.111 0.00 0.00 0.00 4.79
2576 2631 2.512745 TGCACGCAAACAGTCGGT 60.513 55.556 0.00 0.00 0.00 4.69
2577 2632 2.249309 CTGCACGCAAACAGTCGG 59.751 61.111 0.00 0.00 0.00 4.79
2578 2633 2.249309 CCTGCACGCAAACAGTCG 59.751 61.111 0.00 0.00 31.76 4.18
2579 2634 2.639286 CCCTGCACGCAAACAGTC 59.361 61.111 0.00 0.00 31.76 3.51
2580 2635 3.595758 GCCCTGCACGCAAACAGT 61.596 61.111 0.00 0.00 31.76 3.55
2581 2636 4.688419 CGCCCTGCACGCAAACAG 62.688 66.667 2.20 0.00 0.00 3.16
2583 2638 4.683334 GTCGCCCTGCACGCAAAC 62.683 66.667 2.20 0.00 0.00 2.93
2584 2639 4.927782 AGTCGCCCTGCACGCAAA 62.928 61.111 2.20 0.00 0.00 3.68
2585 2640 2.997952 TAAAGTCGCCCTGCACGCAA 62.998 55.000 2.20 0.00 0.00 4.85
2586 2641 3.523087 TAAAGTCGCCCTGCACGCA 62.523 57.895 2.20 0.00 0.00 5.24
2587 2642 2.740714 CTAAAGTCGCCCTGCACGC 61.741 63.158 0.00 0.00 0.00 5.34
2588 2643 0.460284 ATCTAAAGTCGCCCTGCACG 60.460 55.000 0.00 0.00 0.00 5.34
2589 2644 1.134670 AGATCTAAAGTCGCCCTGCAC 60.135 52.381 0.00 0.00 0.00 4.57
2590 2645 1.137086 GAGATCTAAAGTCGCCCTGCA 59.863 52.381 0.00 0.00 0.00 4.41
2591 2646 1.539280 GGAGATCTAAAGTCGCCCTGC 60.539 57.143 0.00 0.00 30.34 4.85
2592 2647 2.035632 AGGAGATCTAAAGTCGCCCTG 58.964 52.381 0.00 0.00 36.35 4.45
2593 2648 2.035632 CAGGAGATCTAAAGTCGCCCT 58.964 52.381 0.00 0.00 36.35 5.19
2594 2649 1.069358 CCAGGAGATCTAAAGTCGCCC 59.931 57.143 0.00 0.00 36.35 6.13
2595 2650 1.539280 GCCAGGAGATCTAAAGTCGCC 60.539 57.143 0.00 0.00 36.00 5.54
2596 2651 1.137086 TGCCAGGAGATCTAAAGTCGC 59.863 52.381 0.00 0.00 0.00 5.19
2597 2652 2.428890 ACTGCCAGGAGATCTAAAGTCG 59.571 50.000 0.00 0.00 0.00 4.18
2598 2653 3.490078 CGACTGCCAGGAGATCTAAAGTC 60.490 52.174 0.00 2.45 0.00 3.01
2599 2654 2.428890 CGACTGCCAGGAGATCTAAAGT 59.571 50.000 0.00 0.00 0.00 2.66
2600 2655 2.690497 TCGACTGCCAGGAGATCTAAAG 59.310 50.000 0.00 0.00 0.00 1.85
2601 2656 2.690497 CTCGACTGCCAGGAGATCTAAA 59.310 50.000 0.00 0.00 0.00 1.85
2602 2657 2.302260 CTCGACTGCCAGGAGATCTAA 58.698 52.381 0.00 0.00 0.00 2.10
2603 2658 1.213182 ACTCGACTGCCAGGAGATCTA 59.787 52.381 0.00 0.00 0.00 1.98
2604 2659 0.033601 ACTCGACTGCCAGGAGATCT 60.034 55.000 0.00 0.00 0.00 2.75
2605 2660 0.102120 CACTCGACTGCCAGGAGATC 59.898 60.000 5.17 0.00 0.00 2.75
2606 2661 1.326213 CCACTCGACTGCCAGGAGAT 61.326 60.000 5.17 0.00 0.00 2.75
2607 2662 1.979155 CCACTCGACTGCCAGGAGA 60.979 63.158 5.17 0.00 0.00 3.71
2608 2663 1.821061 AACCACTCGACTGCCAGGAG 61.821 60.000 0.00 0.00 0.00 3.69
2609 2664 1.837051 AACCACTCGACTGCCAGGA 60.837 57.895 0.00 0.00 0.00 3.86
2610 2665 1.669115 CAACCACTCGACTGCCAGG 60.669 63.158 0.00 0.00 0.00 4.45
2611 2666 1.669115 CCAACCACTCGACTGCCAG 60.669 63.158 0.00 0.00 0.00 4.85
2612 2667 1.480212 ATCCAACCACTCGACTGCCA 61.480 55.000 0.00 0.00 0.00 4.92
2613 2668 0.741221 GATCCAACCACTCGACTGCC 60.741 60.000 0.00 0.00 0.00 4.85
2614 2669 0.247736 AGATCCAACCACTCGACTGC 59.752 55.000 0.00 0.00 0.00 4.40
2615 2670 2.341257 CAAGATCCAACCACTCGACTG 58.659 52.381 0.00 0.00 0.00 3.51
2616 2671 1.276421 CCAAGATCCAACCACTCGACT 59.724 52.381 0.00 0.00 0.00 4.18
2617 2672 1.002087 ACCAAGATCCAACCACTCGAC 59.998 52.381 0.00 0.00 0.00 4.20
2618 2673 1.275291 GACCAAGATCCAACCACTCGA 59.725 52.381 0.00 0.00 0.00 4.04
2619 2674 1.726853 GACCAAGATCCAACCACTCG 58.273 55.000 0.00 0.00 0.00 4.18
2620 2675 1.275291 TCGACCAAGATCCAACCACTC 59.725 52.381 0.00 0.00 0.00 3.51
2621 2676 1.276421 CTCGACCAAGATCCAACCACT 59.724 52.381 0.00 0.00 0.00 4.00
2622 2677 1.002087 ACTCGACCAAGATCCAACCAC 59.998 52.381 0.00 0.00 0.00 4.16
2623 2678 1.001974 CACTCGACCAAGATCCAACCA 59.998 52.381 0.00 0.00 0.00 3.67
2624 2679 1.275291 TCACTCGACCAAGATCCAACC 59.725 52.381 0.00 0.00 0.00 3.77
2625 2680 2.743636 TCACTCGACCAAGATCCAAC 57.256 50.000 0.00 0.00 0.00 3.77
2626 2681 3.599343 CAATCACTCGACCAAGATCCAA 58.401 45.455 0.00 0.00 0.00 3.53
2627 2682 2.677902 GCAATCACTCGACCAAGATCCA 60.678 50.000 0.00 0.00 0.00 3.41
2628 2683 1.936547 GCAATCACTCGACCAAGATCC 59.063 52.381 0.00 0.00 0.00 3.36
2629 2684 2.898705 AGCAATCACTCGACCAAGATC 58.101 47.619 0.00 0.00 0.00 2.75
2630 2685 3.265791 GAAGCAATCACTCGACCAAGAT 58.734 45.455 0.00 0.00 0.00 2.40
2631 2686 2.688507 GAAGCAATCACTCGACCAAGA 58.311 47.619 0.00 0.00 0.00 3.02
2632 2687 1.391485 CGAAGCAATCACTCGACCAAG 59.609 52.381 0.00 0.00 0.00 3.61
2633 2688 1.270094 ACGAAGCAATCACTCGACCAA 60.270 47.619 0.00 0.00 0.00 3.67
2634 2689 0.317160 ACGAAGCAATCACTCGACCA 59.683 50.000 0.00 0.00 0.00 4.02
2635 2690 0.716108 CACGAAGCAATCACTCGACC 59.284 55.000 0.00 0.00 0.00 4.79
2636 2691 0.716108 CCACGAAGCAATCACTCGAC 59.284 55.000 0.00 0.00 0.00 4.20
2637 2692 0.317160 ACCACGAAGCAATCACTCGA 59.683 50.000 0.00 0.00 0.00 4.04
2638 2693 0.716108 GACCACGAAGCAATCACTCG 59.284 55.000 0.00 0.00 0.00 4.18
2639 2694 0.716108 CGACCACGAAGCAATCACTC 59.284 55.000 0.00 0.00 42.66 3.51
2640 2695 0.317160 TCGACCACGAAGCAATCACT 59.683 50.000 0.00 0.00 45.74 3.41
2641 2696 2.822306 TCGACCACGAAGCAATCAC 58.178 52.632 0.00 0.00 45.74 3.06
2650 2705 1.026584 TTCAAGACACTCGACCACGA 58.973 50.000 0.00 0.00 46.56 4.35
2651 2706 1.986378 GATTCAAGACACTCGACCACG 59.014 52.381 0.00 0.00 41.26 4.94
2652 2707 2.338500 GGATTCAAGACACTCGACCAC 58.662 52.381 0.00 0.00 0.00 4.16
2653 2708 1.067846 CGGATTCAAGACACTCGACCA 60.068 52.381 0.00 0.00 0.00 4.02
2654 2709 1.067776 ACGGATTCAAGACACTCGACC 60.068 52.381 0.00 0.00 0.00 4.79
2655 2710 2.251893 GACGGATTCAAGACACTCGAC 58.748 52.381 0.00 0.00 0.00 4.20
2656 2711 1.135774 CGACGGATTCAAGACACTCGA 60.136 52.381 0.00 0.00 0.00 4.04
2657 2712 1.135774 TCGACGGATTCAAGACACTCG 60.136 52.381 0.00 0.00 0.00 4.18
2658 2713 2.095161 ACTCGACGGATTCAAGACACTC 60.095 50.000 0.00 0.00 0.00 3.51
2659 2714 1.887198 ACTCGACGGATTCAAGACACT 59.113 47.619 0.00 0.00 0.00 3.55
2660 2715 1.986378 CACTCGACGGATTCAAGACAC 59.014 52.381 0.00 0.00 0.00 3.67
2661 2716 1.067846 CCACTCGACGGATTCAAGACA 60.068 52.381 0.00 0.00 0.00 3.41
2662 2717 1.630148 CCACTCGACGGATTCAAGAC 58.370 55.000 0.00 0.00 0.00 3.01
2663 2718 0.530744 CCCACTCGACGGATTCAAGA 59.469 55.000 0.00 0.00 0.00 3.02
2664 2719 0.530744 TCCCACTCGACGGATTCAAG 59.469 55.000 0.00 0.00 0.00 3.02
2665 2720 1.191535 ATCCCACTCGACGGATTCAA 58.808 50.000 0.00 0.00 35.21 2.69
2666 2721 1.679680 GTATCCCACTCGACGGATTCA 59.320 52.381 8.76 0.00 39.62 2.57
2667 2722 1.000496 GGTATCCCACTCGACGGATTC 60.000 57.143 8.76 4.90 39.62 2.52
2668 2723 1.038280 GGTATCCCACTCGACGGATT 58.962 55.000 8.76 0.00 39.62 3.01
2669 2724 0.185416 AGGTATCCCACTCGACGGAT 59.815 55.000 8.56 8.56 41.79 4.18
2670 2725 0.465097 GAGGTATCCCACTCGACGGA 60.465 60.000 0.00 0.00 0.00 4.69
2671 2726 1.453762 GGAGGTATCCCACTCGACGG 61.454 65.000 0.00 0.00 40.03 4.79
2672 2727 0.750546 TGGAGGTATCCCACTCGACG 60.751 60.000 0.00 0.00 46.04 5.12
2673 2728 1.409427 CTTGGAGGTATCCCACTCGAC 59.591 57.143 0.00 0.00 46.04 4.20
2674 2729 1.006758 ACTTGGAGGTATCCCACTCGA 59.993 52.381 0.00 0.00 46.04 4.04
2675 2730 1.409427 GACTTGGAGGTATCCCACTCG 59.591 57.143 0.00 0.00 46.04 4.18
2676 2731 1.409427 CGACTTGGAGGTATCCCACTC 59.591 57.143 0.00 0.00 46.04 3.51
2677 2732 1.006758 TCGACTTGGAGGTATCCCACT 59.993 52.381 0.00 0.00 46.04 4.00
2678 2733 1.481871 TCGACTTGGAGGTATCCCAC 58.518 55.000 0.00 0.00 46.04 4.61
2679 2734 2.434336 CAATCGACTTGGAGGTATCCCA 59.566 50.000 0.00 0.00 46.04 4.37
2680 2735 2.698797 TCAATCGACTTGGAGGTATCCC 59.301 50.000 0.00 0.00 46.04 3.85
2681 2736 4.402056 TTCAATCGACTTGGAGGTATCC 57.598 45.455 0.00 0.00 46.87 2.59
2682 2737 4.811557 CCTTTCAATCGACTTGGAGGTATC 59.188 45.833 14.86 0.00 35.54 2.24
2683 2738 4.225267 ACCTTTCAATCGACTTGGAGGTAT 59.775 41.667 20.77 9.18 43.70 2.73
2684 2739 3.581332 ACCTTTCAATCGACTTGGAGGTA 59.419 43.478 20.77 1.31 43.70 3.08
2685 2740 2.372172 ACCTTTCAATCGACTTGGAGGT 59.628 45.455 18.78 18.78 42.22 3.85
2686 2741 2.744202 CACCTTTCAATCGACTTGGAGG 59.256 50.000 18.05 18.05 41.00 4.30
2687 2742 3.433615 GTCACCTTTCAATCGACTTGGAG 59.566 47.826 0.00 0.00 35.43 3.86
2688 2743 3.071023 AGTCACCTTTCAATCGACTTGGA 59.929 43.478 0.00 0.00 33.20 3.53
2689 2744 3.403038 AGTCACCTTTCAATCGACTTGG 58.597 45.455 0.00 0.00 33.20 3.61
2690 2745 4.752101 AGAAGTCACCTTTCAATCGACTTG 59.248 41.667 7.75 0.00 44.66 3.16
2691 2746 4.962155 AGAAGTCACCTTTCAATCGACTT 58.038 39.130 2.93 2.93 46.66 3.01
2692 2747 4.608948 AGAAGTCACCTTTCAATCGACT 57.391 40.909 0.00 0.00 38.55 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.