Multiple sequence alignment - TraesCS7A01G318600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G318600 chr7A 100.000 3305 0 0 1 3305 459003481 459006785 0.000000e+00 6104.0
1 TraesCS7A01G318600 chr7A 94.872 234 10 2 33 264 74642128 74641895 6.740000e-97 364.0
2 TraesCS7A01G318600 chr7D 92.140 2799 135 38 554 3305 401145347 401148107 0.000000e+00 3871.0
3 TraesCS7A01G318600 chr7D 79.558 181 33 4 84 262 548230061 548229883 3.460000e-25 126.0
4 TraesCS7A01G318600 chr7B 92.180 2417 102 34 940 3305 410842485 410844865 0.000000e+00 3336.0
5 TraesCS7A01G318600 chr7B 91.803 244 9 2 590 833 410842246 410842478 2.460000e-86 329.0
6 TraesCS7A01G318600 chr7B 95.000 100 5 0 495 594 410841775 410841874 1.230000e-34 158.0
7 TraesCS7A01G318600 chr7B 89.076 119 7 6 264 377 410819763 410819880 3.440000e-30 143.0
8 TraesCS7A01G318600 chr7B 77.222 180 38 3 85 262 347687679 347687501 5.830000e-18 102.0
9 TraesCS7A01G318600 chr2A 96.226 265 9 1 1 264 613139917 613140181 1.820000e-117 433.0
10 TraesCS7A01G318600 chr5A 96.212 264 8 2 1 263 694506640 694506902 6.550000e-117 431.0
11 TraesCS7A01G318600 chr5A 94.175 206 10 2 56 260 22060792 22060588 2.480000e-81 313.0
12 TraesCS7A01G318600 chr5A 93.077 130 8 1 2916 3045 439421026 439420898 4.350000e-44 189.0
13 TraesCS7A01G318600 chr6A 96.198 263 9 1 1 262 76667554 76667292 2.360000e-116 429.0
14 TraesCS7A01G318600 chr6A 84.239 184 27 2 76 258 574283918 574283736 9.420000e-41 178.0
15 TraesCS7A01G318600 chr6A 91.071 56 4 1 2690 2745 135448713 135448767 1.270000e-09 75.0
16 TraesCS7A01G318600 chr2D 94.737 266 12 2 1 265 407952832 407952568 2.370000e-111 412.0
17 TraesCS7A01G318600 chr2D 91.358 162 14 0 2744 2905 134301481 134301642 4.290000e-54 222.0
18 TraesCS7A01G318600 chr4B 94.318 264 13 2 1 263 40607079 40607341 1.430000e-108 403.0
19 TraesCS7A01G318600 chr1A 90.530 264 23 2 1 262 165194599 165194862 6.790000e-92 348.0
20 TraesCS7A01G318600 chr1A 90.455 220 18 2 43 261 577987755 577987538 1.500000e-73 287.0
21 TraesCS7A01G318600 chr2B 94.393 214 12 0 1 214 575880450 575880663 2.460000e-86 329.0
22 TraesCS7A01G318600 chr2B 94.309 123 6 1 2916 3038 118598184 118598305 1.570000e-43 187.0
23 TraesCS7A01G318600 chr1D 91.064 235 19 2 29 262 481552996 481552763 1.910000e-82 316.0
24 TraesCS7A01G318600 chr5D 93.827 162 9 1 2745 2905 529218159 529218320 3.290000e-60 243.0
25 TraesCS7A01G318600 chr5D 90.698 43 4 0 90 132 454926918 454926960 1.280000e-04 58.4
26 TraesCS7A01G318600 chr4D 93.038 158 11 0 2748 2905 34661524 34661681 7.130000e-57 231.0
27 TraesCS7A01G318600 chr3D 92.547 161 10 2 2748 2907 87926165 87926006 2.570000e-56 230.0
28 TraesCS7A01G318600 chr3D 76.957 230 36 14 41 262 319841398 319841618 7.490000e-22 115.0
29 TraesCS7A01G318600 chr6B 92.405 158 12 0 2748 2905 226361515 226361672 3.320000e-55 226.0
30 TraesCS7A01G318600 chr6B 92.405 158 11 1 2748 2905 633056403 633056559 1.190000e-54 224.0
31 TraesCS7A01G318600 chr6B 92.308 130 8 2 2916 3044 490650621 490650493 2.030000e-42 183.0
32 TraesCS7A01G318600 chr6B 81.884 138 20 5 48 183 675494497 675494631 9.690000e-21 111.0
33 TraesCS7A01G318600 chr6B 89.286 56 5 1 2690 2745 199935415 199935469 5.920000e-08 69.4
34 TraesCS7A01G318600 chr3A 91.358 162 12 2 2742 2902 356085197 356085357 1.540000e-53 220.0
35 TraesCS7A01G318600 chr3B 93.846 130 6 2 2916 3045 354011379 354011252 9.360000e-46 195.0
36 TraesCS7A01G318600 chr3B 94.309 123 6 1 2916 3038 464340729 464340608 1.570000e-43 187.0
37 TraesCS7A01G318600 chr4A 91.971 137 8 3 2916 3051 658953813 658953947 4.350000e-44 189.0
38 TraesCS7A01G318600 chr1B 94.309 123 6 1 2916 3038 47635684 47635563 1.570000e-43 187.0
39 TraesCS7A01G318600 chr1B 92.000 50 4 0 86 135 560024073 560024122 1.650000e-08 71.3
40 TraesCS7A01G318600 chr1B 73.684 171 40 5 91 260 356897137 356896971 9.900000e-06 62.1
41 TraesCS7A01G318600 chr6D 76.692 133 27 4 98 228 391533343 391533473 1.650000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G318600 chr7A 459003481 459006785 3304 False 6104.000000 6104 100.000000 1 3305 1 chr7A.!!$F1 3304
1 TraesCS7A01G318600 chr7D 401145347 401148107 2760 False 3871.000000 3871 92.140000 554 3305 1 chr7D.!!$F1 2751
2 TraesCS7A01G318600 chr7B 410841775 410844865 3090 False 1274.333333 3336 92.994333 495 3305 3 chr7B.!!$F2 2810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
413 414 0.033504 TTGTGTCCTGCGTCTCTTCC 59.966 55.0 0.0 0.0 0.00 3.46 F
997 1379 0.035439 GTTTGCGAGGGGGAGAATCA 60.035 55.0 0.0 0.0 36.25 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2080 2462 0.602638 TCAAACAGCGCGAACTCCAT 60.603 50.0 12.1 0.0 0.00 3.41 R
2341 2735 0.602638 CCAGCAGTACTTCGGTTGCA 60.603 55.0 0.0 0.0 34.99 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 7.694388 TGAAATCAAGAAAGGTATATCGTCG 57.306 36.000 0.00 0.00 0.00 5.12
31 32 7.485810 TGAAATCAAGAAAGGTATATCGTCGA 58.514 34.615 0.00 0.00 0.00 4.20
32 33 7.977293 TGAAATCAAGAAAGGTATATCGTCGAA 59.023 33.333 0.00 0.00 0.00 3.71
33 34 8.888579 AAATCAAGAAAGGTATATCGTCGAAT 57.111 30.769 0.00 0.00 0.00 3.34
34 35 8.522178 AATCAAGAAAGGTATATCGTCGAATC 57.478 34.615 0.00 0.00 0.00 2.52
35 36 7.034685 TCAAGAAAGGTATATCGTCGAATCA 57.965 36.000 0.00 0.00 0.00 2.57
36 37 7.658261 TCAAGAAAGGTATATCGTCGAATCAT 58.342 34.615 0.00 0.00 0.00 2.45
37 38 7.595130 TCAAGAAAGGTATATCGTCGAATCATG 59.405 37.037 0.00 0.00 0.00 3.07
38 39 6.982852 AGAAAGGTATATCGTCGAATCATGT 58.017 36.000 0.00 0.00 0.00 3.21
39 40 6.863645 AGAAAGGTATATCGTCGAATCATGTG 59.136 38.462 0.00 0.00 0.00 3.21
40 41 5.060662 AGGTATATCGTCGAATCATGTGG 57.939 43.478 0.00 0.00 0.00 4.17
41 42 3.612860 GGTATATCGTCGAATCATGTGGC 59.387 47.826 0.00 0.00 0.00 5.01
42 43 2.880963 TATCGTCGAATCATGTGGCA 57.119 45.000 0.00 0.00 0.00 4.92
43 44 2.022764 ATCGTCGAATCATGTGGCAA 57.977 45.000 0.00 0.00 0.00 4.52
44 45 2.022764 TCGTCGAATCATGTGGCAAT 57.977 45.000 0.00 0.00 0.00 3.56
45 46 1.933181 TCGTCGAATCATGTGGCAATC 59.067 47.619 0.00 0.00 0.00 2.67
46 47 1.332290 CGTCGAATCATGTGGCAATCG 60.332 52.381 0.00 0.00 0.00 3.34
47 48 1.665679 GTCGAATCATGTGGCAATCGT 59.334 47.619 0.00 0.00 0.00 3.73
48 49 2.863740 GTCGAATCATGTGGCAATCGTA 59.136 45.455 0.00 0.00 0.00 3.43
49 50 2.863740 TCGAATCATGTGGCAATCGTAC 59.136 45.455 0.00 0.00 0.00 3.67
50 51 2.607180 CGAATCATGTGGCAATCGTACA 59.393 45.455 0.00 0.00 0.00 2.90
51 52 3.248363 CGAATCATGTGGCAATCGTACAT 59.752 43.478 0.00 0.00 35.56 2.29
57 58 4.614555 TGTGGCAATCGTACATGAAATC 57.385 40.909 0.00 0.00 0.00 2.17
58 59 4.006319 TGTGGCAATCGTACATGAAATCA 58.994 39.130 0.00 0.00 0.00 2.57
59 60 4.639755 TGTGGCAATCGTACATGAAATCAT 59.360 37.500 0.00 0.00 36.96 2.45
60 61 5.819901 TGTGGCAATCGTACATGAAATCATA 59.180 36.000 0.00 0.00 34.26 2.15
61 62 6.018016 TGTGGCAATCGTACATGAAATCATAG 60.018 38.462 0.00 0.00 34.26 2.23
62 63 6.202762 GTGGCAATCGTACATGAAATCATAGA 59.797 38.462 0.00 0.00 34.26 1.98
63 64 6.424812 TGGCAATCGTACATGAAATCATAGAG 59.575 38.462 0.00 0.00 34.26 2.43
64 65 6.646653 GGCAATCGTACATGAAATCATAGAGA 59.353 38.462 0.00 0.00 34.26 3.10
65 66 7.148672 GGCAATCGTACATGAAATCATAGAGAG 60.149 40.741 0.00 0.00 34.26 3.20
66 67 7.596621 GCAATCGTACATGAAATCATAGAGAGA 59.403 37.037 0.00 0.00 34.26 3.10
67 68 9.636879 CAATCGTACATGAAATCATAGAGAGAT 57.363 33.333 0.00 0.00 34.26 2.75
68 69 9.853555 AATCGTACATGAAATCATAGAGAGATC 57.146 33.333 0.00 0.00 34.26 2.75
69 70 7.522374 TCGTACATGAAATCATAGAGAGATCG 58.478 38.462 0.00 0.00 34.26 3.69
70 71 7.387948 TCGTACATGAAATCATAGAGAGATCGA 59.612 37.037 0.00 0.00 34.26 3.59
71 72 8.017946 CGTACATGAAATCATAGAGAGATCGAA 58.982 37.037 0.00 0.00 34.26 3.71
72 73 9.853555 GTACATGAAATCATAGAGAGATCGAAT 57.146 33.333 0.00 0.00 34.26 3.34
73 74 8.760103 ACATGAAATCATAGAGAGATCGAATG 57.240 34.615 0.00 0.00 34.26 2.67
74 75 7.331440 ACATGAAATCATAGAGAGATCGAATGC 59.669 37.037 0.00 0.00 34.26 3.56
75 76 6.990798 TGAAATCATAGAGAGATCGAATGCT 58.009 36.000 0.00 0.00 0.00 3.79
76 77 7.440198 TGAAATCATAGAGAGATCGAATGCTT 58.560 34.615 0.00 0.00 0.00 3.91
77 78 7.930325 TGAAATCATAGAGAGATCGAATGCTTT 59.070 33.333 0.00 0.00 0.00 3.51
78 79 8.674263 AAATCATAGAGAGATCGAATGCTTTT 57.326 30.769 0.00 0.00 0.00 2.27
79 80 9.770097 AAATCATAGAGAGATCGAATGCTTTTA 57.230 29.630 0.00 0.00 0.00 1.52
80 81 9.941325 AATCATAGAGAGATCGAATGCTTTTAT 57.059 29.630 0.00 0.00 0.00 1.40
81 82 9.941325 ATCATAGAGAGATCGAATGCTTTTATT 57.059 29.630 0.00 0.00 0.00 1.40
82 83 9.201127 TCATAGAGAGATCGAATGCTTTTATTG 57.799 33.333 0.00 0.00 0.00 1.90
83 84 6.297694 AGAGAGATCGAATGCTTTTATTGC 57.702 37.500 0.00 0.00 0.00 3.56
84 85 6.054295 AGAGAGATCGAATGCTTTTATTGCT 58.946 36.000 0.00 0.00 0.00 3.91
85 86 6.541641 AGAGAGATCGAATGCTTTTATTGCTT 59.458 34.615 0.00 0.00 0.00 3.91
86 87 6.493116 AGAGATCGAATGCTTTTATTGCTTG 58.507 36.000 0.00 0.00 0.00 4.01
87 88 6.094603 AGAGATCGAATGCTTTTATTGCTTGT 59.905 34.615 0.00 0.00 0.00 3.16
88 89 7.280876 AGAGATCGAATGCTTTTATTGCTTGTA 59.719 33.333 0.00 0.00 0.00 2.41
89 90 7.761409 AGATCGAATGCTTTTATTGCTTGTAA 58.239 30.769 0.00 0.00 0.00 2.41
90 91 8.408601 AGATCGAATGCTTTTATTGCTTGTAAT 58.591 29.630 0.00 0.00 0.00 1.89
91 92 8.931385 ATCGAATGCTTTTATTGCTTGTAATT 57.069 26.923 0.00 0.00 0.00 1.40
92 93 8.755696 TCGAATGCTTTTATTGCTTGTAATTT 57.244 26.923 0.00 0.00 0.00 1.82
93 94 9.202273 TCGAATGCTTTTATTGCTTGTAATTTT 57.798 25.926 0.00 0.00 0.00 1.82
94 95 9.253275 CGAATGCTTTTATTGCTTGTAATTTTG 57.747 29.630 0.00 0.00 0.00 2.44
97 98 8.082334 TGCTTTTATTGCTTGTAATTTTGTCC 57.918 30.769 0.00 0.00 0.00 4.02
98 99 7.712639 TGCTTTTATTGCTTGTAATTTTGTCCA 59.287 29.630 0.00 0.00 0.00 4.02
99 100 8.720562 GCTTTTATTGCTTGTAATTTTGTCCAT 58.279 29.630 0.00 0.00 0.00 3.41
101 102 9.770097 TTTTATTGCTTGTAATTTTGTCCATGA 57.230 25.926 0.00 0.00 0.00 3.07
102 103 9.770097 TTTATTGCTTGTAATTTTGTCCATGAA 57.230 25.926 0.00 0.00 0.00 2.57
103 104 9.941325 TTATTGCTTGTAATTTTGTCCATGAAT 57.059 25.926 0.00 0.00 0.00 2.57
104 105 8.851541 ATTGCTTGTAATTTTGTCCATGAATT 57.148 26.923 0.00 0.00 0.00 2.17
105 106 8.674263 TTGCTTGTAATTTTGTCCATGAATTT 57.326 26.923 0.00 0.00 0.00 1.82
106 107 9.770097 TTGCTTGTAATTTTGTCCATGAATTTA 57.230 25.926 0.00 0.00 0.00 1.40
107 108 9.421806 TGCTTGTAATTTTGTCCATGAATTTAG 57.578 29.630 0.00 0.00 0.00 1.85
108 109 8.872845 GCTTGTAATTTTGTCCATGAATTTAGG 58.127 33.333 0.00 0.00 0.00 2.69
111 112 8.250332 TGTAATTTTGTCCATGAATTTAGGAGC 58.750 33.333 0.00 0.00 30.78 4.70
112 113 7.486407 AATTTTGTCCATGAATTTAGGAGCT 57.514 32.000 0.00 0.00 30.78 4.09
113 114 6.515272 TTTTGTCCATGAATTTAGGAGCTC 57.485 37.500 4.71 4.71 30.78 4.09
114 115 4.842531 TGTCCATGAATTTAGGAGCTCA 57.157 40.909 17.19 0.00 30.78 4.26
115 116 5.178096 TGTCCATGAATTTAGGAGCTCAA 57.822 39.130 17.19 1.16 30.78 3.02
116 117 5.569355 TGTCCATGAATTTAGGAGCTCAAA 58.431 37.500 17.19 8.90 30.78 2.69
117 118 6.189859 TGTCCATGAATTTAGGAGCTCAAAT 58.810 36.000 17.19 10.94 30.78 2.32
118 119 6.664816 TGTCCATGAATTTAGGAGCTCAAATT 59.335 34.615 19.34 19.34 37.12 1.82
119 120 7.178983 TGTCCATGAATTTAGGAGCTCAAATTT 59.821 33.333 19.93 13.81 35.14 1.82
120 121 7.704047 GTCCATGAATTTAGGAGCTCAAATTTC 59.296 37.037 19.93 19.43 35.14 2.17
121 122 6.694411 CCATGAATTTAGGAGCTCAAATTTCG 59.306 38.462 19.93 13.47 35.14 3.46
122 123 7.415541 CCATGAATTTAGGAGCTCAAATTTCGA 60.416 37.037 19.93 11.38 35.14 3.71
123 124 7.076842 TGAATTTAGGAGCTCAAATTTCGAG 57.923 36.000 19.93 11.18 35.14 4.04
124 125 6.094048 TGAATTTAGGAGCTCAAATTTCGAGG 59.906 38.462 19.93 0.00 35.14 4.63
125 126 1.743996 AGGAGCTCAAATTTCGAGGC 58.256 50.000 17.19 6.48 0.00 4.70
126 127 1.280421 AGGAGCTCAAATTTCGAGGCT 59.720 47.619 17.19 10.08 0.00 4.58
127 128 1.668237 GGAGCTCAAATTTCGAGGCTC 59.332 52.381 17.19 3.87 35.10 4.70
128 129 2.350522 GAGCTCAAATTTCGAGGCTCA 58.649 47.619 15.95 0.00 35.52 4.26
129 130 2.079925 AGCTCAAATTTCGAGGCTCAC 58.920 47.619 15.95 0.00 0.00 3.51
130 131 1.806542 GCTCAAATTTCGAGGCTCACA 59.193 47.619 15.95 0.00 0.00 3.58
131 132 2.226437 GCTCAAATTTCGAGGCTCACAA 59.774 45.455 15.95 6.57 0.00 3.33
132 133 3.119708 GCTCAAATTTCGAGGCTCACAAT 60.120 43.478 15.95 8.72 0.00 2.71
133 134 4.656041 CTCAAATTTCGAGGCTCACAATC 58.344 43.478 15.95 0.00 0.00 2.67
134 135 4.326826 TCAAATTTCGAGGCTCACAATCT 58.673 39.130 15.95 0.00 0.00 2.40
135 136 4.761739 TCAAATTTCGAGGCTCACAATCTT 59.238 37.500 15.95 6.36 0.00 2.40
136 137 4.691860 AATTTCGAGGCTCACAATCTTG 57.308 40.909 15.95 0.00 0.00 3.02
137 138 1.442769 TTCGAGGCTCACAATCTTGC 58.557 50.000 15.95 0.00 0.00 4.01
138 139 0.610174 TCGAGGCTCACAATCTTGCT 59.390 50.000 15.95 0.00 0.00 3.91
139 140 1.824852 TCGAGGCTCACAATCTTGCTA 59.175 47.619 15.95 0.00 0.00 3.49
140 141 2.159184 TCGAGGCTCACAATCTTGCTAG 60.159 50.000 15.95 0.00 0.00 3.42
141 142 2.559440 GAGGCTCACAATCTTGCTAGG 58.441 52.381 10.25 0.00 0.00 3.02
142 143 1.020437 GGCTCACAATCTTGCTAGGC 58.980 55.000 0.00 3.87 33.75 3.93
143 144 1.679944 GGCTCACAATCTTGCTAGGCA 60.680 52.381 11.44 0.00 38.13 4.75
144 145 2.295885 GCTCACAATCTTGCTAGGCAT 58.704 47.619 0.00 0.00 38.76 4.40
145 146 2.033049 GCTCACAATCTTGCTAGGCATG 59.967 50.000 0.00 0.00 38.76 4.06
146 147 2.019249 TCACAATCTTGCTAGGCATGC 58.981 47.619 9.90 9.90 38.76 4.06
147 148 1.746787 CACAATCTTGCTAGGCATGCA 59.253 47.619 21.36 0.00 38.76 3.96
148 149 1.747355 ACAATCTTGCTAGGCATGCAC 59.253 47.619 21.36 9.10 40.40 4.57
149 150 2.022195 CAATCTTGCTAGGCATGCACT 58.978 47.619 21.36 16.19 40.40 4.40
150 151 2.426024 CAATCTTGCTAGGCATGCACTT 59.574 45.455 21.36 6.93 40.40 3.16
151 152 2.205022 TCTTGCTAGGCATGCACTTT 57.795 45.000 21.36 4.24 40.40 2.66
152 153 2.086869 TCTTGCTAGGCATGCACTTTC 58.913 47.619 21.36 0.72 40.40 2.62
153 154 0.804364 TTGCTAGGCATGCACTTTCG 59.196 50.000 21.36 7.53 40.40 3.46
154 155 1.063166 GCTAGGCATGCACTTTCGC 59.937 57.895 21.36 12.82 0.00 4.70
155 156 1.372087 GCTAGGCATGCACTTTCGCT 61.372 55.000 21.36 7.82 0.00 4.93
156 157 0.654683 CTAGGCATGCACTTTCGCTC 59.345 55.000 21.36 0.00 0.00 5.03
157 158 1.083806 TAGGCATGCACTTTCGCTCG 61.084 55.000 21.36 0.00 0.00 5.03
158 159 2.099062 GCATGCACTTTCGCTCGG 59.901 61.111 14.21 0.00 0.00 4.63
159 160 2.787249 CATGCACTTTCGCTCGGG 59.213 61.111 0.00 0.00 0.00 5.14
160 161 2.034879 CATGCACTTTCGCTCGGGT 61.035 57.895 0.00 0.00 0.00 5.28
161 162 1.302511 ATGCACTTTCGCTCGGGTT 60.303 52.632 0.00 0.00 0.00 4.11
162 163 0.036765 ATGCACTTTCGCTCGGGTTA 60.037 50.000 0.00 0.00 0.00 2.85
163 164 0.669318 TGCACTTTCGCTCGGGTTAG 60.669 55.000 0.00 0.00 0.00 2.34
164 165 1.359459 GCACTTTCGCTCGGGTTAGG 61.359 60.000 0.00 0.00 0.00 2.69
165 166 1.079336 ACTTTCGCTCGGGTTAGGC 60.079 57.895 0.00 0.00 0.00 3.93
166 167 1.814169 CTTTCGCTCGGGTTAGGCC 60.814 63.158 0.00 0.00 0.00 5.19
167 168 3.652539 TTTCGCTCGGGTTAGGCCG 62.653 63.158 0.00 0.00 38.44 6.13
175 176 4.078516 GGTTAGGCCGCCGTGTCT 62.079 66.667 3.05 0.00 0.00 3.41
176 177 2.813908 GTTAGGCCGCCGTGTCTG 60.814 66.667 3.05 0.00 0.00 3.51
177 178 4.077184 TTAGGCCGCCGTGTCTGG 62.077 66.667 3.05 0.00 0.00 3.86
180 181 4.382320 GGCCGCCGTGTCTGGTTA 62.382 66.667 0.00 0.00 0.00 2.85
181 182 2.813908 GCCGCCGTGTCTGGTTAG 60.814 66.667 0.00 0.00 0.00 2.34
182 183 2.125673 CCGCCGTGTCTGGTTAGG 60.126 66.667 0.00 0.00 0.00 2.69
183 184 2.813908 CGCCGTGTCTGGTTAGGC 60.814 66.667 0.00 0.00 44.00 3.93
184 185 2.436115 GCCGTGTCTGGTTAGGCC 60.436 66.667 0.00 0.00 41.81 5.19
185 186 2.955881 GCCGTGTCTGGTTAGGCCT 61.956 63.158 11.78 11.78 41.81 5.19
186 187 1.218316 CCGTGTCTGGTTAGGCCTC 59.782 63.158 9.68 0.00 38.35 4.70
187 188 1.218316 CGTGTCTGGTTAGGCCTCC 59.782 63.158 9.68 5.89 38.35 4.30
188 189 1.602771 GTGTCTGGTTAGGCCTCCC 59.397 63.158 9.68 12.09 38.35 4.30
189 190 1.615424 TGTCTGGTTAGGCCTCCCC 60.615 63.158 9.68 11.65 38.35 4.81
190 191 2.365105 TCTGGTTAGGCCTCCCCG 60.365 66.667 9.68 7.57 39.21 5.73
191 192 2.365105 CTGGTTAGGCCTCCCCGA 60.365 66.667 9.68 0.63 39.21 5.14
192 193 1.993391 CTGGTTAGGCCTCCCCGAA 60.993 63.158 9.68 0.00 39.21 4.30
193 194 1.972660 CTGGTTAGGCCTCCCCGAAG 61.973 65.000 9.68 0.68 39.21 3.79
194 195 1.688187 GGTTAGGCCTCCCCGAAGA 60.688 63.158 9.68 0.00 39.21 2.87
195 196 1.054978 GGTTAGGCCTCCCCGAAGAT 61.055 60.000 9.68 0.00 39.21 2.40
196 197 0.837940 GTTAGGCCTCCCCGAAGATT 59.162 55.000 9.68 0.00 39.21 2.40
197 198 1.212195 GTTAGGCCTCCCCGAAGATTT 59.788 52.381 9.68 0.00 39.21 2.17
198 199 0.837272 TAGGCCTCCCCGAAGATTTG 59.163 55.000 9.68 0.00 39.21 2.32
199 200 0.914417 AGGCCTCCCCGAAGATTTGA 60.914 55.000 0.00 0.00 39.21 2.69
200 201 0.034477 GGCCTCCCCGAAGATTTGAA 60.034 55.000 0.00 0.00 0.00 2.69
201 202 1.410224 GGCCTCCCCGAAGATTTGAAT 60.410 52.381 0.00 0.00 0.00 2.57
202 203 2.379005 GCCTCCCCGAAGATTTGAATT 58.621 47.619 0.00 0.00 0.00 2.17
203 204 2.760650 GCCTCCCCGAAGATTTGAATTT 59.239 45.455 0.00 0.00 0.00 1.82
204 205 3.195610 GCCTCCCCGAAGATTTGAATTTT 59.804 43.478 0.00 0.00 0.00 1.82
205 206 4.401202 GCCTCCCCGAAGATTTGAATTTTA 59.599 41.667 0.00 0.00 0.00 1.52
206 207 5.069119 GCCTCCCCGAAGATTTGAATTTTAT 59.931 40.000 0.00 0.00 0.00 1.40
207 208 6.735968 GCCTCCCCGAAGATTTGAATTTTATC 60.736 42.308 0.00 0.00 0.00 1.75
208 209 6.239036 CCTCCCCGAAGATTTGAATTTTATCC 60.239 42.308 0.00 0.00 0.00 2.59
209 210 5.596772 TCCCCGAAGATTTGAATTTTATCCC 59.403 40.000 0.00 0.00 0.00 3.85
210 211 5.598417 CCCCGAAGATTTGAATTTTATCCCT 59.402 40.000 0.00 0.00 0.00 4.20
211 212 6.461509 CCCCGAAGATTTGAATTTTATCCCTG 60.462 42.308 0.00 0.00 0.00 4.45
212 213 6.096846 CCCGAAGATTTGAATTTTATCCCTGT 59.903 38.462 0.00 0.00 0.00 4.00
213 214 7.284489 CCCGAAGATTTGAATTTTATCCCTGTA 59.716 37.037 0.00 0.00 0.00 2.74
214 215 8.682710 CCGAAGATTTGAATTTTATCCCTGTAA 58.317 33.333 0.00 0.00 0.00 2.41
241 242 8.776376 ATTGTGACAATTTAAATAAAGCCTGG 57.224 30.769 4.72 0.00 0.00 4.45
242 243 6.162777 TGTGACAATTTAAATAAAGCCTGGC 58.837 36.000 11.65 11.65 0.00 4.85
243 244 5.288472 GTGACAATTTAAATAAAGCCTGGCG 59.712 40.000 13.96 0.00 0.00 5.69
244 245 5.184096 TGACAATTTAAATAAAGCCTGGCGA 59.816 36.000 13.96 3.00 0.00 5.54
245 246 5.650543 ACAATTTAAATAAAGCCTGGCGAG 58.349 37.500 13.96 0.00 0.00 5.03
246 247 4.918810 ATTTAAATAAAGCCTGGCGAGG 57.081 40.909 13.96 10.99 43.19 4.63
247 248 3.637911 TTAAATAAAGCCTGGCGAGGA 57.362 42.857 20.35 0.00 42.93 3.71
248 249 2.736670 AAATAAAGCCTGGCGAGGAT 57.263 45.000 20.35 9.97 42.93 3.24
249 250 1.972872 AATAAAGCCTGGCGAGGATG 58.027 50.000 20.35 0.00 42.93 3.51
250 251 0.839946 ATAAAGCCTGGCGAGGATGT 59.160 50.000 20.35 10.42 42.93 3.06
251 252 0.178068 TAAAGCCTGGCGAGGATGTC 59.822 55.000 20.35 0.00 42.93 3.06
252 253 1.557269 AAAGCCTGGCGAGGATGTCT 61.557 55.000 20.35 2.60 42.93 3.41
253 254 1.965754 AAGCCTGGCGAGGATGTCTC 61.966 60.000 20.35 0.00 42.93 3.36
254 255 2.725312 GCCTGGCGAGGATGTCTCA 61.725 63.158 20.35 0.00 42.93 3.27
255 256 1.900351 CCTGGCGAGGATGTCTCAA 59.100 57.895 9.58 0.00 42.93 3.02
256 257 0.250234 CCTGGCGAGGATGTCTCAAA 59.750 55.000 9.58 0.00 42.93 2.69
257 258 1.339055 CCTGGCGAGGATGTCTCAAAA 60.339 52.381 9.58 0.00 42.93 2.44
258 259 2.426522 CTGGCGAGGATGTCTCAAAAA 58.573 47.619 0.00 0.00 42.55 1.94
283 284 2.227194 ACGTTCTTAGCCAGTTTTGGG 58.773 47.619 0.00 0.00 45.16 4.12
284 285 2.158726 ACGTTCTTAGCCAGTTTTGGGA 60.159 45.455 0.00 0.00 45.16 4.37
285 286 2.484264 CGTTCTTAGCCAGTTTTGGGAG 59.516 50.000 0.00 0.00 45.16 4.30
286 287 2.820197 GTTCTTAGCCAGTTTTGGGAGG 59.180 50.000 0.00 0.00 45.16 4.30
287 288 1.177401 CTTAGCCAGTTTTGGGAGGC 58.823 55.000 0.00 0.00 45.16 4.70
289 290 4.198087 GCCAGTTTTGGGAGGCTT 57.802 55.556 0.00 0.00 45.16 4.35
290 291 1.967535 GCCAGTTTTGGGAGGCTTC 59.032 57.895 0.00 0.00 45.16 3.86
291 292 0.540597 GCCAGTTTTGGGAGGCTTCT 60.541 55.000 0.00 0.00 45.16 2.85
292 293 1.271926 GCCAGTTTTGGGAGGCTTCTA 60.272 52.381 0.00 0.00 45.16 2.10
293 294 2.716217 CCAGTTTTGGGAGGCTTCTAG 58.284 52.381 0.00 0.00 41.05 2.43
294 295 2.305927 CCAGTTTTGGGAGGCTTCTAGA 59.694 50.000 0.00 0.00 41.05 2.43
295 296 3.244911 CCAGTTTTGGGAGGCTTCTAGAA 60.245 47.826 4.81 4.81 41.05 2.10
296 297 4.398319 CAGTTTTGGGAGGCTTCTAGAAA 58.602 43.478 6.63 0.00 0.00 2.52
297 298 4.216472 CAGTTTTGGGAGGCTTCTAGAAAC 59.784 45.833 6.63 1.57 0.00 2.78
298 299 4.104897 AGTTTTGGGAGGCTTCTAGAAACT 59.895 41.667 6.63 7.78 32.89 2.66
299 300 4.724279 TTTGGGAGGCTTCTAGAAACTT 57.276 40.909 6.63 0.00 0.00 2.66
300 301 3.983044 TGGGAGGCTTCTAGAAACTTC 57.017 47.619 6.63 7.98 0.00 3.01
301 302 2.572104 TGGGAGGCTTCTAGAAACTTCC 59.428 50.000 22.62 22.62 0.00 3.46
302 303 2.418884 GGGAGGCTTCTAGAAACTTCCG 60.419 54.545 23.34 6.82 0.00 4.30
303 304 2.418884 GGAGGCTTCTAGAAACTTCCGG 60.419 54.545 18.12 0.00 0.00 5.14
304 305 1.066071 AGGCTTCTAGAAACTTCCGGC 60.066 52.381 6.63 6.15 0.00 6.13
305 306 1.066071 GGCTTCTAGAAACTTCCGGCT 60.066 52.381 6.63 0.00 0.00 5.52
306 307 2.167900 GGCTTCTAGAAACTTCCGGCTA 59.832 50.000 6.63 0.00 0.00 3.93
307 308 3.449632 GCTTCTAGAAACTTCCGGCTAG 58.550 50.000 6.63 0.26 33.37 3.42
308 309 3.119065 GCTTCTAGAAACTTCCGGCTAGT 60.119 47.826 6.63 0.00 33.72 2.57
309 310 4.621038 GCTTCTAGAAACTTCCGGCTAGTT 60.621 45.833 13.95 13.95 37.43 2.24
310 311 5.479124 TTCTAGAAACTTCCGGCTAGTTT 57.521 39.130 25.25 25.25 45.73 2.66
311 312 5.479124 TCTAGAAACTTCCGGCTAGTTTT 57.521 39.130 25.54 19.41 43.76 2.43
312 313 5.476614 TCTAGAAACTTCCGGCTAGTTTTC 58.523 41.667 25.54 19.91 43.76 2.29
313 314 4.353383 AGAAACTTCCGGCTAGTTTTCT 57.647 40.909 25.54 21.13 43.76 2.52
314 315 4.715713 AGAAACTTCCGGCTAGTTTTCTT 58.284 39.130 25.54 16.18 43.76 2.52
315 316 4.515567 AGAAACTTCCGGCTAGTTTTCTTG 59.484 41.667 25.54 0.00 43.76 3.02
316 317 3.487120 ACTTCCGGCTAGTTTTCTTGT 57.513 42.857 0.00 0.00 0.00 3.16
317 318 3.816994 ACTTCCGGCTAGTTTTCTTGTT 58.183 40.909 0.00 0.00 0.00 2.83
318 319 4.204799 ACTTCCGGCTAGTTTTCTTGTTT 58.795 39.130 0.00 0.00 0.00 2.83
319 320 4.275196 ACTTCCGGCTAGTTTTCTTGTTTC 59.725 41.667 0.00 0.00 0.00 2.78
320 321 3.143728 TCCGGCTAGTTTTCTTGTTTCC 58.856 45.455 0.00 0.00 0.00 3.13
321 322 2.882137 CCGGCTAGTTTTCTTGTTTCCA 59.118 45.455 0.00 0.00 0.00 3.53
322 323 3.506067 CCGGCTAGTTTTCTTGTTTCCAT 59.494 43.478 0.00 0.00 0.00 3.41
323 324 4.379499 CCGGCTAGTTTTCTTGTTTCCATC 60.379 45.833 0.00 0.00 0.00 3.51
324 325 4.455877 CGGCTAGTTTTCTTGTTTCCATCT 59.544 41.667 0.00 0.00 0.00 2.90
325 326 5.617751 CGGCTAGTTTTCTTGTTTCCATCTG 60.618 44.000 0.00 0.00 0.00 2.90
326 327 5.335976 GGCTAGTTTTCTTGTTTCCATCTGG 60.336 44.000 0.00 0.00 0.00 3.86
327 328 5.241728 GCTAGTTTTCTTGTTTCCATCTGGT 59.758 40.000 0.00 0.00 36.34 4.00
328 329 6.239036 GCTAGTTTTCTTGTTTCCATCTGGTT 60.239 38.462 0.00 0.00 36.34 3.67
329 330 6.544928 AGTTTTCTTGTTTCCATCTGGTTT 57.455 33.333 0.00 0.00 36.34 3.27
330 331 6.946340 AGTTTTCTTGTTTCCATCTGGTTTT 58.054 32.000 0.00 0.00 36.34 2.43
331 332 7.394016 AGTTTTCTTGTTTCCATCTGGTTTTT 58.606 30.769 0.00 0.00 36.34 1.94
399 400 3.651562 CGTCTCACGAACTTTTTGTGT 57.348 42.857 6.25 0.00 46.05 3.72
400 401 3.594312 CGTCTCACGAACTTTTTGTGTC 58.406 45.455 6.25 0.02 46.05 3.67
401 402 3.543460 CGTCTCACGAACTTTTTGTGTCC 60.543 47.826 6.25 0.00 46.05 4.02
402 403 3.621715 GTCTCACGAACTTTTTGTGTCCT 59.378 43.478 6.25 0.00 43.93 3.85
403 404 3.621268 TCTCACGAACTTTTTGTGTCCTG 59.379 43.478 6.25 0.00 43.93 3.86
404 405 2.096819 TCACGAACTTTTTGTGTCCTGC 59.903 45.455 6.25 0.00 43.93 4.85
405 406 1.063469 ACGAACTTTTTGTGTCCTGCG 59.937 47.619 0.00 0.00 0.00 5.18
406 407 1.063469 CGAACTTTTTGTGTCCTGCGT 59.937 47.619 0.00 0.00 0.00 5.24
407 408 2.716398 GAACTTTTTGTGTCCTGCGTC 58.284 47.619 0.00 0.00 0.00 5.19
408 409 2.038387 ACTTTTTGTGTCCTGCGTCT 57.962 45.000 0.00 0.00 0.00 4.18
409 410 1.940613 ACTTTTTGTGTCCTGCGTCTC 59.059 47.619 0.00 0.00 0.00 3.36
410 411 2.213499 CTTTTTGTGTCCTGCGTCTCT 58.787 47.619 0.00 0.00 0.00 3.10
411 412 2.325583 TTTTGTGTCCTGCGTCTCTT 57.674 45.000 0.00 0.00 0.00 2.85
412 413 1.865865 TTTGTGTCCTGCGTCTCTTC 58.134 50.000 0.00 0.00 0.00 2.87
413 414 0.033504 TTGTGTCCTGCGTCTCTTCC 59.966 55.000 0.00 0.00 0.00 3.46
414 415 0.827925 TGTGTCCTGCGTCTCTTCCT 60.828 55.000 0.00 0.00 0.00 3.36
415 416 0.109039 GTGTCCTGCGTCTCTTCCTC 60.109 60.000 0.00 0.00 0.00 3.71
416 417 0.251386 TGTCCTGCGTCTCTTCCTCT 60.251 55.000 0.00 0.00 0.00 3.69
417 418 0.454196 GTCCTGCGTCTCTTCCTCTC 59.546 60.000 0.00 0.00 0.00 3.20
418 419 1.027255 TCCTGCGTCTCTTCCTCTCG 61.027 60.000 0.00 0.00 0.00 4.04
419 420 1.309499 CCTGCGTCTCTTCCTCTCGT 61.309 60.000 0.00 0.00 0.00 4.18
420 421 0.098025 CTGCGTCTCTTCCTCTCGTC 59.902 60.000 0.00 0.00 0.00 4.20
421 422 1.306642 TGCGTCTCTTCCTCTCGTCC 61.307 60.000 0.00 0.00 0.00 4.79
422 423 1.716760 CGTCTCTTCCTCTCGTCCG 59.283 63.158 0.00 0.00 0.00 4.79
423 424 0.740164 CGTCTCTTCCTCTCGTCCGA 60.740 60.000 0.00 0.00 0.00 4.55
424 425 1.451067 GTCTCTTCCTCTCGTCCGAA 58.549 55.000 0.00 0.00 0.00 4.30
425 426 2.018515 GTCTCTTCCTCTCGTCCGAAT 58.981 52.381 0.00 0.00 0.00 3.34
426 427 2.032426 GTCTCTTCCTCTCGTCCGAATC 59.968 54.545 0.00 0.00 0.00 2.52
427 428 1.335496 CTCTTCCTCTCGTCCGAATCC 59.665 57.143 0.00 0.00 0.00 3.01
428 429 0.386113 CTTCCTCTCGTCCGAATCCC 59.614 60.000 0.00 0.00 0.00 3.85
429 430 1.041447 TTCCTCTCGTCCGAATCCCC 61.041 60.000 0.00 0.00 0.00 4.81
430 431 1.455959 CCTCTCGTCCGAATCCCCT 60.456 63.158 0.00 0.00 0.00 4.79
431 432 1.736586 CTCTCGTCCGAATCCCCTG 59.263 63.158 0.00 0.00 0.00 4.45
432 433 1.000019 TCTCGTCCGAATCCCCTGT 60.000 57.895 0.00 0.00 0.00 4.00
433 434 1.035932 TCTCGTCCGAATCCCCTGTC 61.036 60.000 0.00 0.00 0.00 3.51
434 435 1.000019 TCGTCCGAATCCCCTGTCT 60.000 57.895 0.00 0.00 0.00 3.41
435 436 0.613853 TCGTCCGAATCCCCTGTCTT 60.614 55.000 0.00 0.00 0.00 3.01
436 437 0.249398 CGTCCGAATCCCCTGTCTTT 59.751 55.000 0.00 0.00 0.00 2.52
437 438 1.739371 CGTCCGAATCCCCTGTCTTTC 60.739 57.143 0.00 0.00 0.00 2.62
438 439 0.909623 TCCGAATCCCCTGTCTTTCC 59.090 55.000 0.00 0.00 0.00 3.13
439 440 0.462047 CCGAATCCCCTGTCTTTCCG 60.462 60.000 0.00 0.00 0.00 4.30
440 441 0.535335 CGAATCCCCTGTCTTTCCGA 59.465 55.000 0.00 0.00 0.00 4.55
441 442 1.139058 CGAATCCCCTGTCTTTCCGAT 59.861 52.381 0.00 0.00 0.00 4.18
442 443 2.565841 GAATCCCCTGTCTTTCCGATG 58.434 52.381 0.00 0.00 0.00 3.84
443 444 0.839946 ATCCCCTGTCTTTCCGATGG 59.160 55.000 0.00 0.00 0.00 3.51
444 445 1.452108 CCCCTGTCTTTCCGATGGC 60.452 63.158 0.00 0.00 0.00 4.40
445 446 1.452108 CCCTGTCTTTCCGATGGCC 60.452 63.158 0.00 0.00 0.00 5.36
446 447 1.815421 CCTGTCTTTCCGATGGCCG 60.815 63.158 0.00 0.00 38.18 6.13
447 448 2.435938 TGTCTTTCCGATGGCCGC 60.436 61.111 0.00 0.00 36.84 6.53
448 449 2.125106 GTCTTTCCGATGGCCGCT 60.125 61.111 0.00 0.00 36.84 5.52
449 450 2.174319 GTCTTTCCGATGGCCGCTC 61.174 63.158 0.00 0.00 36.84 5.03
450 451 2.187946 CTTTCCGATGGCCGCTCT 59.812 61.111 0.00 0.00 36.84 4.09
451 452 1.884926 CTTTCCGATGGCCGCTCTC 60.885 63.158 0.00 0.00 36.84 3.20
452 453 3.385749 TTTCCGATGGCCGCTCTCC 62.386 63.158 0.00 0.00 36.84 3.71
454 455 4.899239 CCGATGGCCGCTCTCCAC 62.899 72.222 0.00 0.00 36.26 4.02
455 456 4.147449 CGATGGCCGCTCTCCACA 62.147 66.667 0.00 0.00 36.26 4.17
456 457 2.268920 GATGGCCGCTCTCCACAA 59.731 61.111 0.00 0.00 36.26 3.33
457 458 1.377202 GATGGCCGCTCTCCACAAA 60.377 57.895 0.00 0.00 36.26 2.83
458 459 1.648467 GATGGCCGCTCTCCACAAAC 61.648 60.000 0.00 0.00 36.26 2.93
459 460 3.423154 GGCCGCTCTCCACAAACG 61.423 66.667 0.00 0.00 0.00 3.60
460 461 3.423154 GCCGCTCTCCACAAACGG 61.423 66.667 0.00 0.00 46.50 4.44
461 462 3.423154 CCGCTCTCCACAAACGGC 61.423 66.667 0.00 0.00 37.05 5.68
462 463 3.777925 CGCTCTCCACAAACGGCG 61.778 66.667 4.80 4.80 36.89 6.46
463 464 2.665185 GCTCTCCACAAACGGCGT 60.665 61.111 6.77 6.77 0.00 5.68
464 465 2.668280 GCTCTCCACAAACGGCGTC 61.668 63.158 15.17 0.00 0.00 5.19
465 466 1.300620 CTCTCCACAAACGGCGTCA 60.301 57.895 15.17 0.00 0.00 4.35
466 467 1.284982 CTCTCCACAAACGGCGTCAG 61.285 60.000 15.17 11.85 0.00 3.51
467 468 2.954753 CTCCACAAACGGCGTCAGC 61.955 63.158 15.17 0.00 44.18 4.26
477 478 4.116878 GCGTCAGCATCCTCTTCC 57.883 61.111 0.00 0.00 44.35 3.46
478 479 1.519719 GCGTCAGCATCCTCTTCCT 59.480 57.895 0.00 0.00 44.35 3.36
479 480 0.529555 GCGTCAGCATCCTCTTCCTC 60.530 60.000 0.00 0.00 44.35 3.71
480 481 0.820226 CGTCAGCATCCTCTTCCTCA 59.180 55.000 0.00 0.00 0.00 3.86
481 482 1.470632 CGTCAGCATCCTCTTCCTCAC 60.471 57.143 0.00 0.00 0.00 3.51
482 483 0.820226 TCAGCATCCTCTTCCTCACG 59.180 55.000 0.00 0.00 0.00 4.35
483 484 0.534412 CAGCATCCTCTTCCTCACGT 59.466 55.000 0.00 0.00 0.00 4.49
484 485 0.820871 AGCATCCTCTTCCTCACGTC 59.179 55.000 0.00 0.00 0.00 4.34
485 486 0.820871 GCATCCTCTTCCTCACGTCT 59.179 55.000 0.00 0.00 0.00 4.18
486 487 1.470632 GCATCCTCTTCCTCACGTCTG 60.471 57.143 0.00 0.00 0.00 3.51
487 488 1.135915 CATCCTCTTCCTCACGTCTGG 59.864 57.143 0.00 0.00 0.00 3.86
488 489 0.612174 TCCTCTTCCTCACGTCTGGG 60.612 60.000 3.82 0.00 0.00 4.45
489 490 1.216710 CTCTTCCTCACGTCTGGGC 59.783 63.158 3.82 0.00 0.00 5.36
490 491 2.125912 CTTCCTCACGTCTGGGCG 60.126 66.667 3.82 0.00 37.94 6.13
491 492 2.915659 TTCCTCACGTCTGGGCGT 60.916 61.111 0.00 0.00 46.88 5.68
492 493 2.820767 CTTCCTCACGTCTGGGCGTC 62.821 65.000 0.00 0.00 43.83 5.19
493 494 3.374402 CCTCACGTCTGGGCGTCT 61.374 66.667 0.00 0.00 43.83 4.18
548 549 8.409371 TGTGTGATACTATGAAACAAAAGCAAA 58.591 29.630 0.00 0.00 0.00 3.68
608 985 2.128035 CGGACCGACTGCTATCATTTC 58.872 52.381 8.64 0.00 0.00 2.17
612 989 5.357257 GGACCGACTGCTATCATTTCTTTA 58.643 41.667 0.00 0.00 0.00 1.85
614 991 6.483640 GGACCGACTGCTATCATTTCTTTAAT 59.516 38.462 0.00 0.00 0.00 1.40
615 992 7.307455 GGACCGACTGCTATCATTTCTTTAATC 60.307 40.741 0.00 0.00 0.00 1.75
616 993 7.275920 ACCGACTGCTATCATTTCTTTAATCT 58.724 34.615 0.00 0.00 0.00 2.40
617 994 7.225538 ACCGACTGCTATCATTTCTTTAATCTG 59.774 37.037 0.00 0.00 0.00 2.90
618 995 7.307632 CCGACTGCTATCATTTCTTTAATCTGG 60.308 40.741 0.00 0.00 0.00 3.86
619 996 7.269477 ACTGCTATCATTTCTTTAATCTGGC 57.731 36.000 0.00 0.00 0.00 4.85
620 997 7.059156 ACTGCTATCATTTCTTTAATCTGGCT 58.941 34.615 0.00 0.00 0.00 4.75
621 998 8.213679 ACTGCTATCATTTCTTTAATCTGGCTA 58.786 33.333 0.00 0.00 0.00 3.93
622 999 8.978874 TGCTATCATTTCTTTAATCTGGCTAA 57.021 30.769 0.00 0.00 0.00 3.09
705 1082 2.076863 CAAACGACCTCCAGATTCACC 58.923 52.381 0.00 0.00 0.00 4.02
706 1083 1.348064 AACGACCTCCAGATTCACCA 58.652 50.000 0.00 0.00 0.00 4.17
748 1125 6.239298 CGTGCATTAACGTTGTAGTAGTAG 57.761 41.667 11.99 0.00 38.74 2.57
749 1126 5.796935 CGTGCATTAACGTTGTAGTAGTAGT 59.203 40.000 11.99 0.00 38.74 2.73
769 1146 2.988010 ATGGATCTGCAAGCGTCTTA 57.012 45.000 0.00 0.00 0.00 2.10
821 1198 4.943927 GATTGAATCAAGCTCGATCGATG 58.056 43.478 19.78 14.41 0.00 3.84
822 1199 2.747436 TGAATCAAGCTCGATCGATGG 58.253 47.619 19.78 9.24 0.00 3.51
844 1221 6.385443 TGGATCCTCCACTCTAAACTATCAT 58.615 40.000 14.23 0.00 42.67 2.45
845 1222 6.846505 TGGATCCTCCACTCTAAACTATCATT 59.153 38.462 14.23 0.00 42.67 2.57
846 1223 8.010697 TGGATCCTCCACTCTAAACTATCATTA 58.989 37.037 14.23 0.00 42.67 1.90
851 1228 9.575868 CCTCCACTCTAAACTATCATTACTAGA 57.424 37.037 0.00 0.00 0.00 2.43
873 1250 9.933723 CTAGACTAATAACTCTCTACCTAGGTC 57.066 40.741 20.32 0.00 0.00 3.85
874 1251 7.444299 AGACTAATAACTCTCTACCTAGGTCG 58.556 42.308 20.32 13.13 0.00 4.79
875 1252 7.071071 AGACTAATAACTCTCTACCTAGGTCGT 59.929 40.741 20.32 6.31 0.00 4.34
885 1262 1.549170 ACCTAGGTCGTTAGCACTTGG 59.451 52.381 9.21 0.00 33.09 3.61
898 1275 1.810151 GCACTTGGCACTTCCGATTAA 59.190 47.619 0.00 0.00 43.97 1.40
900 1277 3.074412 CACTTGGCACTTCCGATTAACT 58.926 45.455 0.00 0.00 37.80 2.24
903 1280 5.354234 CACTTGGCACTTCCGATTAACTAAT 59.646 40.000 0.00 0.00 37.80 1.73
906 1283 6.229936 TGGCACTTCCGATTAACTAATACT 57.770 37.500 0.00 0.00 37.80 2.12
907 1284 7.350744 TGGCACTTCCGATTAACTAATACTA 57.649 36.000 0.00 0.00 37.80 1.82
908 1285 7.205297 TGGCACTTCCGATTAACTAATACTAC 58.795 38.462 0.00 0.00 37.80 2.73
909 1286 7.147863 TGGCACTTCCGATTAACTAATACTACA 60.148 37.037 0.00 0.00 37.80 2.74
910 1287 7.871463 GGCACTTCCGATTAACTAATACTACAT 59.129 37.037 0.00 0.00 0.00 2.29
911 1288 8.700644 GCACTTCCGATTAACTAATACTACATG 58.299 37.037 0.00 0.00 0.00 3.21
912 1289 8.700644 CACTTCCGATTAACTAATACTACATGC 58.299 37.037 0.00 0.00 0.00 4.06
913 1290 8.418662 ACTTCCGATTAACTAATACTACATGCA 58.581 33.333 0.00 0.00 0.00 3.96
914 1291 9.424319 CTTCCGATTAACTAATACTACATGCAT 57.576 33.333 0.00 0.00 0.00 3.96
917 1294 8.648097 CCGATTAACTAATACTACATGCATGTC 58.352 37.037 34.54 14.42 41.97 3.06
960 1338 1.864565 AAACCAAAACTTGCATCGCC 58.135 45.000 0.00 0.00 0.00 5.54
962 1340 0.749649 ACCAAAACTTGCATCGCCAA 59.250 45.000 0.00 0.00 0.00 4.52
983 1365 5.292101 CCAACAGTAGCTAGATACAGTTTGC 59.708 44.000 21.83 0.00 34.35 3.68
986 1368 4.973051 CAGTAGCTAGATACAGTTTGCGAG 59.027 45.833 19.70 0.00 0.00 5.03
997 1379 0.035439 GTTTGCGAGGGGGAGAATCA 60.035 55.000 0.00 0.00 36.25 2.57
1040 1422 2.747855 GAAGCAACTCAGCCCCCG 60.748 66.667 0.00 0.00 34.23 5.73
1077 1459 3.550431 AGGTGCAGCACGACCACT 61.550 61.111 19.42 7.42 34.83 4.00
1111 1493 0.884704 CTTCCTGGTCACCAACACCG 60.885 60.000 0.00 0.00 36.61 4.94
1230 1612 2.434884 CTCAATGCCACGCGGTCT 60.435 61.111 12.47 0.00 33.28 3.85
1321 1703 4.521062 CCCTCCTCGCCGAAGCAG 62.521 72.222 0.00 0.00 39.83 4.24
1982 2364 1.909287 TACCACTGCACGTAGGCCA 60.909 57.895 5.01 0.00 0.00 5.36
2007 2389 2.187946 CGCCTGCCCTTCTTCGAT 59.812 61.111 0.00 0.00 0.00 3.59
2318 2712 4.350368 TGACATGACTTAGGCAAGAACA 57.650 40.909 0.00 0.00 35.60 3.18
2324 2718 4.973168 TGACTTAGGCAAGAACATGAACT 58.027 39.130 0.00 0.00 35.60 3.01
2332 2726 6.872920 AGGCAAGAACATGAACTAAACAAAA 58.127 32.000 0.00 0.00 0.00 2.44
2333 2727 6.756542 AGGCAAGAACATGAACTAAACAAAAC 59.243 34.615 0.00 0.00 0.00 2.43
2334 2728 6.756542 GGCAAGAACATGAACTAAACAAAACT 59.243 34.615 0.00 0.00 0.00 2.66
2335 2729 7.254084 GGCAAGAACATGAACTAAACAAAACTG 60.254 37.037 0.00 0.00 0.00 3.16
2336 2730 7.275560 GCAAGAACATGAACTAAACAAAACTGT 59.724 33.333 0.00 0.00 0.00 3.55
2337 2731 9.139174 CAAGAACATGAACTAAACAAAACTGTT 57.861 29.630 0.00 0.00 0.00 3.16
2338 2732 8.687824 AGAACATGAACTAAACAAAACTGTTG 57.312 30.769 0.00 0.00 31.64 3.33
2339 2733 8.303876 AGAACATGAACTAAACAAAACTGTTGT 58.696 29.630 0.00 0.00 31.64 3.32
2381 2793 3.270877 GGCGGTCTGAGAACATTGTAAT 58.729 45.455 0.00 0.00 0.00 1.89
2384 2796 5.335661 GGCGGTCTGAGAACATTGTAATTTT 60.336 40.000 0.00 0.00 0.00 1.82
2426 2840 7.439056 AGAACAATTTCATCATGCGTTTTCTTT 59.561 29.630 0.00 0.00 33.72 2.52
2427 2841 7.481275 ACAATTTCATCATGCGTTTTCTTTT 57.519 28.000 0.00 0.00 0.00 2.27
2428 2842 8.586570 ACAATTTCATCATGCGTTTTCTTTTA 57.413 26.923 0.00 0.00 0.00 1.52
2429 2843 8.702438 ACAATTTCATCATGCGTTTTCTTTTAG 58.298 29.630 0.00 0.00 0.00 1.85
2430 2844 8.702438 CAATTTCATCATGCGTTTTCTTTTAGT 58.298 29.630 0.00 0.00 0.00 2.24
2431 2845 9.906660 AATTTCATCATGCGTTTTCTTTTAGTA 57.093 25.926 0.00 0.00 0.00 1.82
2432 2846 8.722342 TTTCATCATGCGTTTTCTTTTAGTAC 57.278 30.769 0.00 0.00 0.00 2.73
2438 2852 7.381948 TCATGCGTTTTCTTTTAGTACTTCGTA 59.618 33.333 0.00 0.00 0.00 3.43
2465 2879 3.459232 TGCCCTACTCAATTCTCATCG 57.541 47.619 0.00 0.00 0.00 3.84
2476 2890 8.103948 ACTCAATTCTCATCGAATTCAAGTTT 57.896 30.769 6.22 0.00 46.71 2.66
2491 2905 9.668497 GAATTCAAGTTTACTACTCCTACCATT 57.332 33.333 0.00 0.00 35.54 3.16
2547 2961 1.901591 AAGCACACTGGACTTGGATG 58.098 50.000 0.00 0.00 0.00 3.51
2573 2987 6.378582 TGTTCGACATTCCTAAAGCAAAATC 58.621 36.000 0.00 0.00 0.00 2.17
2663 3077 1.405105 TCTCAAGCCAAACAGTGCAAC 59.595 47.619 0.00 0.00 0.00 4.17
2692 3106 3.063485 TGATCGCAAACTCAATCGAACA 58.937 40.909 0.00 0.00 34.50 3.18
2739 3153 2.025887 GCCTTCTTTTGGGAGATGGAGA 60.026 50.000 10.07 0.00 41.26 3.71
2758 3172 6.544650 TGGAGAGAGTACATTATACTCCCTC 58.455 44.000 14.09 14.09 43.98 4.30
2770 3184 1.558233 ACTCCCTCCGTTCCTAAGTG 58.442 55.000 0.00 0.00 0.00 3.16
2771 3185 1.203149 ACTCCCTCCGTTCCTAAGTGT 60.203 52.381 0.00 0.00 0.00 3.55
2772 3186 2.042162 ACTCCCTCCGTTCCTAAGTGTA 59.958 50.000 0.00 0.00 0.00 2.90
2773 3187 3.094572 CTCCCTCCGTTCCTAAGTGTAA 58.905 50.000 0.00 0.00 0.00 2.41
2774 3188 2.827921 TCCCTCCGTTCCTAAGTGTAAC 59.172 50.000 0.00 0.00 0.00 2.50
2872 3286 4.522789 TGCTCCGTATATAGTCTGCATTGA 59.477 41.667 0.00 0.00 0.00 2.57
2952 3366 3.009143 CCTAGTCTTACCCCTGCAAAGTT 59.991 47.826 0.00 0.00 0.00 2.66
2974 3388 2.873245 GCAATGCAGAGAGACTGGTTCA 60.873 50.000 0.00 0.00 45.82 3.18
3054 3468 4.699637 TCTGCTCTGAAAACGTTTAGGAA 58.300 39.130 15.03 0.11 0.00 3.36
3075 3489 4.789012 ACACAAATAGCCAAAGGATGTG 57.211 40.909 0.00 0.00 41.69 3.21
3092 3506 6.363065 AGGATGTGAAGATATCAGCAATTGT 58.637 36.000 7.40 0.00 39.19 2.71
3107 3521 4.877282 GCAATTGTACTTGCTAAACCCAA 58.123 39.130 11.49 0.00 46.32 4.12
3108 3522 4.684242 GCAATTGTACTTGCTAAACCCAAC 59.316 41.667 11.49 0.00 46.32 3.77
3110 3524 6.294286 GCAATTGTACTTGCTAAACCCAACTA 60.294 38.462 11.49 0.00 46.32 2.24
3112 3526 6.811253 TTGTACTTGCTAAACCCAACTATG 57.189 37.500 0.00 0.00 0.00 2.23
3117 3531 7.391148 ACTTGCTAAACCCAACTATGTATTG 57.609 36.000 0.00 0.00 0.00 1.90
3145 3572 7.387122 CCATGACAAGTTCTATGTATGATCCAG 59.613 40.741 0.00 0.00 0.00 3.86
3203 3630 5.132502 TCCTTGATGTCAACAGAACAACAT 58.867 37.500 0.00 0.00 35.15 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.697507 ATATACCTTTCTTGATTTCATCCACC 57.302 34.615 0.00 0.00 0.00 4.61
1 2 8.499162 CGATATACCTTTCTTGATTTCATCCAC 58.501 37.037 0.00 0.00 0.00 4.02
2 3 8.210946 ACGATATACCTTTCTTGATTTCATCCA 58.789 33.333 0.00 0.00 0.00 3.41
3 4 8.608844 ACGATATACCTTTCTTGATTTCATCC 57.391 34.615 0.00 0.00 0.00 3.51
4 5 8.428536 CGACGATATACCTTTCTTGATTTCATC 58.571 37.037 0.00 0.00 0.00 2.92
5 6 8.141909 TCGACGATATACCTTTCTTGATTTCAT 58.858 33.333 0.00 0.00 0.00 2.57
6 7 7.485810 TCGACGATATACCTTTCTTGATTTCA 58.514 34.615 0.00 0.00 0.00 2.69
7 8 7.925703 TCGACGATATACCTTTCTTGATTTC 57.074 36.000 0.00 0.00 0.00 2.17
8 9 8.888579 ATTCGACGATATACCTTTCTTGATTT 57.111 30.769 0.00 0.00 0.00 2.17
9 10 8.141909 TGATTCGACGATATACCTTTCTTGATT 58.858 33.333 0.00 0.00 0.00 2.57
10 11 7.658261 TGATTCGACGATATACCTTTCTTGAT 58.342 34.615 0.00 0.00 0.00 2.57
11 12 7.034685 TGATTCGACGATATACCTTTCTTGA 57.965 36.000 0.00 0.00 0.00 3.02
12 13 7.382488 ACATGATTCGACGATATACCTTTCTTG 59.618 37.037 0.00 0.00 0.00 3.02
13 14 7.382488 CACATGATTCGACGATATACCTTTCTT 59.618 37.037 0.00 0.00 0.00 2.52
14 15 6.863645 CACATGATTCGACGATATACCTTTCT 59.136 38.462 0.00 0.00 0.00 2.52
15 16 6.089551 CCACATGATTCGACGATATACCTTTC 59.910 42.308 0.00 0.00 0.00 2.62
16 17 5.926542 CCACATGATTCGACGATATACCTTT 59.073 40.000 0.00 0.00 0.00 3.11
17 18 5.470368 CCACATGATTCGACGATATACCTT 58.530 41.667 0.00 0.00 0.00 3.50
18 19 4.618460 GCCACATGATTCGACGATATACCT 60.618 45.833 0.00 0.00 0.00 3.08
19 20 3.612860 GCCACATGATTCGACGATATACC 59.387 47.826 0.00 0.00 0.00 2.73
20 21 4.234574 TGCCACATGATTCGACGATATAC 58.765 43.478 0.00 0.00 0.00 1.47
21 22 4.513198 TGCCACATGATTCGACGATATA 57.487 40.909 0.00 0.00 0.00 0.86
22 23 3.385193 TGCCACATGATTCGACGATAT 57.615 42.857 0.00 0.00 0.00 1.63
23 24 2.880963 TGCCACATGATTCGACGATA 57.119 45.000 0.00 0.00 0.00 2.92
24 25 2.022764 TTGCCACATGATTCGACGAT 57.977 45.000 0.00 0.00 0.00 3.73
25 26 1.933181 GATTGCCACATGATTCGACGA 59.067 47.619 0.00 0.00 0.00 4.20
26 27 1.332290 CGATTGCCACATGATTCGACG 60.332 52.381 0.00 0.00 0.00 5.12
27 28 1.665679 ACGATTGCCACATGATTCGAC 59.334 47.619 0.00 0.00 0.00 4.20
28 29 2.022764 ACGATTGCCACATGATTCGA 57.977 45.000 0.00 0.00 0.00 3.71
29 30 2.607180 TGTACGATTGCCACATGATTCG 59.393 45.455 0.00 0.00 0.00 3.34
30 31 4.818534 ATGTACGATTGCCACATGATTC 57.181 40.909 0.00 0.00 31.83 2.52
35 36 4.639755 TGATTTCATGTACGATTGCCACAT 59.360 37.500 0.00 0.00 33.22 3.21
36 37 4.006319 TGATTTCATGTACGATTGCCACA 58.994 39.130 0.00 0.00 0.00 4.17
37 38 4.614555 TGATTTCATGTACGATTGCCAC 57.385 40.909 0.00 0.00 0.00 5.01
38 39 6.287525 TCTATGATTTCATGTACGATTGCCA 58.712 36.000 3.30 0.00 37.15 4.92
39 40 6.646653 TCTCTATGATTTCATGTACGATTGCC 59.353 38.462 3.30 0.00 37.15 4.52
40 41 7.596621 TCTCTCTATGATTTCATGTACGATTGC 59.403 37.037 3.30 0.00 37.15 3.56
41 42 9.636879 ATCTCTCTATGATTTCATGTACGATTG 57.363 33.333 3.30 0.00 37.15 2.67
42 43 9.853555 GATCTCTCTATGATTTCATGTACGATT 57.146 33.333 3.30 0.00 37.15 3.34
43 44 8.180920 CGATCTCTCTATGATTTCATGTACGAT 58.819 37.037 3.30 0.21 37.15 3.73
44 45 7.387948 TCGATCTCTCTATGATTTCATGTACGA 59.612 37.037 3.30 0.00 37.15 3.43
45 46 7.522374 TCGATCTCTCTATGATTTCATGTACG 58.478 38.462 3.30 0.00 37.15 3.67
46 47 9.853555 ATTCGATCTCTCTATGATTTCATGTAC 57.146 33.333 3.30 0.00 37.15 2.90
47 48 9.852091 CATTCGATCTCTCTATGATTTCATGTA 57.148 33.333 3.30 0.00 37.15 2.29
48 49 7.331440 GCATTCGATCTCTCTATGATTTCATGT 59.669 37.037 3.30 0.00 37.15 3.21
49 50 7.546316 AGCATTCGATCTCTCTATGATTTCATG 59.454 37.037 3.30 0.00 37.15 3.07
50 51 7.613585 AGCATTCGATCTCTCTATGATTTCAT 58.386 34.615 0.00 0.00 40.22 2.57
51 52 6.990798 AGCATTCGATCTCTCTATGATTTCA 58.009 36.000 0.00 0.00 0.00 2.69
52 53 7.887996 AAGCATTCGATCTCTCTATGATTTC 57.112 36.000 0.00 0.00 0.00 2.17
53 54 8.674263 AAAAGCATTCGATCTCTCTATGATTT 57.326 30.769 2.34 2.34 34.24 2.17
54 55 9.941325 ATAAAAGCATTCGATCTCTCTATGATT 57.059 29.630 0.00 0.00 0.00 2.57
55 56 9.941325 AATAAAAGCATTCGATCTCTCTATGAT 57.059 29.630 0.00 0.00 0.00 2.45
56 57 9.201127 CAATAAAAGCATTCGATCTCTCTATGA 57.799 33.333 0.00 0.00 0.00 2.15
57 58 7.956403 GCAATAAAAGCATTCGATCTCTCTATG 59.044 37.037 0.00 0.00 0.00 2.23
58 59 7.877097 AGCAATAAAAGCATTCGATCTCTCTAT 59.123 33.333 0.00 0.00 0.00 1.98
59 60 7.212976 AGCAATAAAAGCATTCGATCTCTCTA 58.787 34.615 0.00 0.00 0.00 2.43
60 61 6.054295 AGCAATAAAAGCATTCGATCTCTCT 58.946 36.000 0.00 0.00 0.00 3.10
61 62 6.297694 AGCAATAAAAGCATTCGATCTCTC 57.702 37.500 0.00 0.00 0.00 3.20
62 63 6.094603 ACAAGCAATAAAAGCATTCGATCTCT 59.905 34.615 0.00 0.00 0.00 3.10
63 64 6.261118 ACAAGCAATAAAAGCATTCGATCTC 58.739 36.000 0.00 0.00 0.00 2.75
64 65 6.199937 ACAAGCAATAAAAGCATTCGATCT 57.800 33.333 0.00 0.00 0.00 2.75
65 66 7.969387 TTACAAGCAATAAAAGCATTCGATC 57.031 32.000 0.00 0.00 0.00 3.69
66 67 8.931385 AATTACAAGCAATAAAAGCATTCGAT 57.069 26.923 0.00 0.00 0.00 3.59
67 68 8.755696 AAATTACAAGCAATAAAAGCATTCGA 57.244 26.923 0.00 0.00 0.00 3.71
68 69 9.253275 CAAAATTACAAGCAATAAAAGCATTCG 57.747 29.630 0.00 0.00 0.00 3.34
71 72 8.720562 GGACAAAATTACAAGCAATAAAAGCAT 58.279 29.630 0.00 0.00 0.00 3.79
72 73 7.712639 TGGACAAAATTACAAGCAATAAAAGCA 59.287 29.630 0.00 0.00 0.00 3.91
73 74 8.082334 TGGACAAAATTACAAGCAATAAAAGC 57.918 30.769 0.00 0.00 0.00 3.51
75 76 9.770097 TCATGGACAAAATTACAAGCAATAAAA 57.230 25.926 0.00 0.00 0.00 1.52
76 77 9.770097 TTCATGGACAAAATTACAAGCAATAAA 57.230 25.926 0.00 0.00 0.00 1.40
77 78 9.941325 ATTCATGGACAAAATTACAAGCAATAA 57.059 25.926 0.00 0.00 0.00 1.40
78 79 9.941325 AATTCATGGACAAAATTACAAGCAATA 57.059 25.926 0.00 0.00 0.00 1.90
79 80 8.851541 AATTCATGGACAAAATTACAAGCAAT 57.148 26.923 0.00 0.00 0.00 3.56
80 81 8.674263 AAATTCATGGACAAAATTACAAGCAA 57.326 26.923 0.00 0.00 0.00 3.91
81 82 9.421806 CTAAATTCATGGACAAAATTACAAGCA 57.578 29.630 0.00 0.00 0.00 3.91
82 83 8.872845 CCTAAATTCATGGACAAAATTACAAGC 58.127 33.333 0.00 0.00 0.00 4.01
85 86 8.250332 GCTCCTAAATTCATGGACAAAATTACA 58.750 33.333 0.00 0.00 0.00 2.41
86 87 8.470002 AGCTCCTAAATTCATGGACAAAATTAC 58.530 33.333 0.00 0.00 0.00 1.89
87 88 8.593945 AGCTCCTAAATTCATGGACAAAATTA 57.406 30.769 0.00 0.00 0.00 1.40
88 89 7.178983 TGAGCTCCTAAATTCATGGACAAAATT 59.821 33.333 12.15 0.00 0.00 1.82
89 90 6.664816 TGAGCTCCTAAATTCATGGACAAAAT 59.335 34.615 12.15 0.00 0.00 1.82
90 91 6.009589 TGAGCTCCTAAATTCATGGACAAAA 58.990 36.000 12.15 0.00 0.00 2.44
91 92 5.569355 TGAGCTCCTAAATTCATGGACAAA 58.431 37.500 12.15 0.00 0.00 2.83
92 93 5.178096 TGAGCTCCTAAATTCATGGACAA 57.822 39.130 12.15 0.00 0.00 3.18
93 94 4.842531 TGAGCTCCTAAATTCATGGACA 57.157 40.909 12.15 0.00 0.00 4.02
94 95 6.705863 ATTTGAGCTCCTAAATTCATGGAC 57.294 37.500 12.15 0.00 0.00 4.02
95 96 7.415541 CGAAATTTGAGCTCCTAAATTCATGGA 60.416 37.037 19.46 0.00 35.94 3.41
96 97 6.694411 CGAAATTTGAGCTCCTAAATTCATGG 59.306 38.462 19.46 7.81 35.94 3.66
97 98 7.475015 TCGAAATTTGAGCTCCTAAATTCATG 58.525 34.615 19.46 14.00 35.94 3.07
98 99 7.201767 CCTCGAAATTTGAGCTCCTAAATTCAT 60.202 37.037 19.46 9.50 35.94 2.57
99 100 6.094048 CCTCGAAATTTGAGCTCCTAAATTCA 59.906 38.462 19.46 9.90 35.94 2.57
100 101 6.490534 CCTCGAAATTTGAGCTCCTAAATTC 58.509 40.000 19.46 16.04 35.94 2.17
101 102 5.163612 GCCTCGAAATTTGAGCTCCTAAATT 60.164 40.000 12.15 14.23 37.92 1.82
102 103 4.336713 GCCTCGAAATTTGAGCTCCTAAAT 59.663 41.667 12.15 8.69 31.98 1.40
103 104 3.689649 GCCTCGAAATTTGAGCTCCTAAA 59.310 43.478 12.15 6.47 31.98 1.85
104 105 3.055094 AGCCTCGAAATTTGAGCTCCTAA 60.055 43.478 12.15 6.03 31.98 2.69
105 106 2.501723 AGCCTCGAAATTTGAGCTCCTA 59.498 45.455 12.15 0.00 31.98 2.94
106 107 1.280421 AGCCTCGAAATTTGAGCTCCT 59.720 47.619 12.15 0.00 31.98 3.69
107 108 1.668237 GAGCCTCGAAATTTGAGCTCC 59.332 52.381 12.15 0.00 33.94 4.70
108 109 2.095053 GTGAGCCTCGAAATTTGAGCTC 59.905 50.000 19.02 19.02 37.25 4.09
109 110 2.079925 GTGAGCCTCGAAATTTGAGCT 58.920 47.619 4.71 5.92 31.98 4.09
110 111 1.806542 TGTGAGCCTCGAAATTTGAGC 59.193 47.619 4.71 1.39 31.98 4.26
111 112 4.394300 AGATTGTGAGCCTCGAAATTTGAG 59.606 41.667 3.24 3.24 0.00 3.02
112 113 4.326826 AGATTGTGAGCCTCGAAATTTGA 58.673 39.130 0.00 0.00 0.00 2.69
113 114 4.691860 AGATTGTGAGCCTCGAAATTTG 57.308 40.909 0.00 0.00 0.00 2.32
114 115 4.616835 GCAAGATTGTGAGCCTCGAAATTT 60.617 41.667 0.00 0.00 0.00 1.82
115 116 3.119708 GCAAGATTGTGAGCCTCGAAATT 60.120 43.478 0.00 0.00 0.00 1.82
116 117 2.421424 GCAAGATTGTGAGCCTCGAAAT 59.579 45.455 0.00 0.00 0.00 2.17
117 118 1.806542 GCAAGATTGTGAGCCTCGAAA 59.193 47.619 0.00 0.00 0.00 3.46
118 119 1.002430 AGCAAGATTGTGAGCCTCGAA 59.998 47.619 0.00 0.00 0.00 3.71
119 120 0.610174 AGCAAGATTGTGAGCCTCGA 59.390 50.000 0.00 0.00 0.00 4.04
120 121 2.200067 CTAGCAAGATTGTGAGCCTCG 58.800 52.381 0.00 0.00 0.00 4.63
121 122 2.559440 CCTAGCAAGATTGTGAGCCTC 58.441 52.381 0.00 0.00 0.00 4.70
122 123 1.407989 GCCTAGCAAGATTGTGAGCCT 60.408 52.381 0.00 0.00 0.00 4.58
123 124 1.020437 GCCTAGCAAGATTGTGAGCC 58.980 55.000 0.00 0.00 0.00 4.70
124 125 1.742761 TGCCTAGCAAGATTGTGAGC 58.257 50.000 0.00 0.00 34.76 4.26
125 126 2.033049 GCATGCCTAGCAAGATTGTGAG 59.967 50.000 6.36 0.00 43.62 3.51
126 127 2.019249 GCATGCCTAGCAAGATTGTGA 58.981 47.619 6.36 0.00 43.62 3.58
127 128 1.746787 TGCATGCCTAGCAAGATTGTG 59.253 47.619 16.68 0.00 43.62 3.33
128 129 1.747355 GTGCATGCCTAGCAAGATTGT 59.253 47.619 16.68 0.00 44.64 2.71
129 130 2.022195 AGTGCATGCCTAGCAAGATTG 58.978 47.619 16.68 0.00 44.64 2.67
130 131 2.431954 AGTGCATGCCTAGCAAGATT 57.568 45.000 16.68 0.00 44.64 2.40
131 132 2.431954 AAGTGCATGCCTAGCAAGAT 57.568 45.000 16.68 0.00 44.64 2.40
132 133 2.086869 GAAAGTGCATGCCTAGCAAGA 58.913 47.619 16.68 0.00 44.64 3.02
133 134 1.202110 CGAAAGTGCATGCCTAGCAAG 60.202 52.381 16.68 0.00 44.64 4.01
134 135 0.804364 CGAAAGTGCATGCCTAGCAA 59.196 50.000 16.68 0.00 44.64 3.91
135 136 1.647545 GCGAAAGTGCATGCCTAGCA 61.648 55.000 16.68 0.00 44.86 3.49
136 137 1.063166 GCGAAAGTGCATGCCTAGC 59.937 57.895 16.68 13.55 34.15 3.42
137 138 0.654683 GAGCGAAAGTGCATGCCTAG 59.345 55.000 16.68 8.21 37.31 3.02
138 139 1.083806 CGAGCGAAAGTGCATGCCTA 61.084 55.000 16.68 0.00 37.31 3.93
139 140 2.393768 CGAGCGAAAGTGCATGCCT 61.394 57.895 16.68 9.12 37.31 4.75
140 141 2.099062 CGAGCGAAAGTGCATGCC 59.901 61.111 16.68 6.65 37.31 4.40
141 142 2.099062 CCGAGCGAAAGTGCATGC 59.901 61.111 11.82 11.82 37.31 4.06
142 143 1.577328 AACCCGAGCGAAAGTGCATG 61.577 55.000 0.00 0.00 37.31 4.06
143 144 0.036765 TAACCCGAGCGAAAGTGCAT 60.037 50.000 0.00 0.00 37.31 3.96
144 145 0.669318 CTAACCCGAGCGAAAGTGCA 60.669 55.000 0.00 0.00 37.31 4.57
145 146 1.359459 CCTAACCCGAGCGAAAGTGC 61.359 60.000 0.00 0.00 0.00 4.40
146 147 1.359459 GCCTAACCCGAGCGAAAGTG 61.359 60.000 0.00 0.00 0.00 3.16
147 148 1.079336 GCCTAACCCGAGCGAAAGT 60.079 57.895 0.00 0.00 0.00 2.66
148 149 1.814169 GGCCTAACCCGAGCGAAAG 60.814 63.158 0.00 0.00 0.00 2.62
149 150 2.266689 GGCCTAACCCGAGCGAAA 59.733 61.111 0.00 0.00 0.00 3.46
158 159 4.078516 AGACACGGCGGCCTAACC 62.079 66.667 18.34 3.91 0.00 2.85
159 160 2.813908 CAGACACGGCGGCCTAAC 60.814 66.667 18.34 5.90 0.00 2.34
160 161 4.077184 CCAGACACGGCGGCCTAA 62.077 66.667 18.34 0.00 0.00 2.69
163 164 4.382320 TAACCAGACACGGCGGCC 62.382 66.667 13.24 9.54 0.00 6.13
164 165 2.813908 CTAACCAGACACGGCGGC 60.814 66.667 13.24 0.00 0.00 6.53
165 166 2.125673 CCTAACCAGACACGGCGG 60.126 66.667 13.24 2.35 0.00 6.13
166 167 2.813908 GCCTAACCAGACACGGCG 60.814 66.667 4.80 4.80 0.00 6.46
167 168 2.436115 GGCCTAACCAGACACGGC 60.436 66.667 0.00 0.00 38.86 5.68
168 169 1.218316 GAGGCCTAACCAGACACGG 59.782 63.158 4.42 0.00 43.14 4.94
169 170 1.218316 GGAGGCCTAACCAGACACG 59.782 63.158 4.42 0.00 43.14 4.49
170 171 1.602771 GGGAGGCCTAACCAGACAC 59.397 63.158 18.75 0.00 43.14 3.67
171 172 1.615424 GGGGAGGCCTAACCAGACA 60.615 63.158 23.48 0.00 43.14 3.41
172 173 2.732619 CGGGGAGGCCTAACCAGAC 61.733 68.421 23.48 8.87 43.14 3.51
173 174 2.365105 CGGGGAGGCCTAACCAGA 60.365 66.667 23.48 0.00 43.14 3.86
174 175 1.972660 CTTCGGGGAGGCCTAACCAG 61.973 65.000 23.48 20.18 43.14 4.00
175 176 1.993391 CTTCGGGGAGGCCTAACCA 60.993 63.158 23.48 9.82 43.14 3.67
176 177 1.054978 ATCTTCGGGGAGGCCTAACC 61.055 60.000 4.42 11.95 39.61 2.85
177 178 0.837940 AATCTTCGGGGAGGCCTAAC 59.162 55.000 4.42 0.59 0.00 2.34
178 179 1.211949 CAAATCTTCGGGGAGGCCTAA 59.788 52.381 4.42 0.00 0.00 2.69
179 180 0.837272 CAAATCTTCGGGGAGGCCTA 59.163 55.000 4.42 0.00 0.00 3.93
180 181 0.914417 TCAAATCTTCGGGGAGGCCT 60.914 55.000 3.86 3.86 0.00 5.19
181 182 0.034477 TTCAAATCTTCGGGGAGGCC 60.034 55.000 0.00 0.00 0.00 5.19
182 183 2.058593 ATTCAAATCTTCGGGGAGGC 57.941 50.000 0.00 0.00 0.00 4.70
183 184 6.239036 GGATAAAATTCAAATCTTCGGGGAGG 60.239 42.308 0.00 0.00 0.00 4.30
184 185 6.239036 GGGATAAAATTCAAATCTTCGGGGAG 60.239 42.308 0.00 0.00 0.00 4.30
185 186 5.596772 GGGATAAAATTCAAATCTTCGGGGA 59.403 40.000 0.00 0.00 0.00 4.81
186 187 5.598417 AGGGATAAAATTCAAATCTTCGGGG 59.402 40.000 0.00 0.00 0.00 5.73
187 188 6.096846 ACAGGGATAAAATTCAAATCTTCGGG 59.903 38.462 0.00 0.00 0.00 5.14
188 189 7.100458 ACAGGGATAAAATTCAAATCTTCGG 57.900 36.000 0.00 0.00 0.00 4.30
215 216 9.868277 CCAGGCTTTATTTAAATTGTCACAATA 57.132 29.630 2.67 0.00 0.00 1.90
216 217 7.334171 GCCAGGCTTTATTTAAATTGTCACAAT 59.666 33.333 3.29 0.00 0.00 2.71
217 218 6.648725 GCCAGGCTTTATTTAAATTGTCACAA 59.351 34.615 3.29 0.00 0.00 3.33
218 219 6.162777 GCCAGGCTTTATTTAAATTGTCACA 58.837 36.000 3.29 0.00 0.00 3.58
219 220 5.288472 CGCCAGGCTTTATTTAAATTGTCAC 59.712 40.000 10.54 0.00 0.00 3.67
220 221 5.184096 TCGCCAGGCTTTATTTAAATTGTCA 59.816 36.000 10.54 0.00 0.00 3.58
221 222 5.646606 TCGCCAGGCTTTATTTAAATTGTC 58.353 37.500 10.54 0.00 0.00 3.18
222 223 5.394115 CCTCGCCAGGCTTTATTTAAATTGT 60.394 40.000 10.54 0.00 30.98 2.71
223 224 5.043248 CCTCGCCAGGCTTTATTTAAATTG 58.957 41.667 10.54 0.00 30.98 2.32
224 225 4.953579 TCCTCGCCAGGCTTTATTTAAATT 59.046 37.500 10.54 0.00 40.12 1.82
225 226 4.532834 TCCTCGCCAGGCTTTATTTAAAT 58.467 39.130 10.54 5.89 40.12 1.40
226 227 3.958018 TCCTCGCCAGGCTTTATTTAAA 58.042 40.909 10.54 0.00 40.12 1.52
227 228 3.637911 TCCTCGCCAGGCTTTATTTAA 57.362 42.857 10.54 0.00 40.12 1.52
228 229 3.118038 ACATCCTCGCCAGGCTTTATTTA 60.118 43.478 10.54 0.00 40.12 1.40
229 230 2.301346 CATCCTCGCCAGGCTTTATTT 58.699 47.619 10.54 0.00 40.12 1.40
230 231 1.212935 ACATCCTCGCCAGGCTTTATT 59.787 47.619 10.54 0.00 40.12 1.40
231 232 0.839946 ACATCCTCGCCAGGCTTTAT 59.160 50.000 10.54 0.00 40.12 1.40
232 233 0.178068 GACATCCTCGCCAGGCTTTA 59.822 55.000 10.54 0.00 40.12 1.85
233 234 1.078143 GACATCCTCGCCAGGCTTT 60.078 57.895 10.54 0.00 40.12 3.51
234 235 1.965754 GAGACATCCTCGCCAGGCTT 61.966 60.000 10.54 0.00 40.12 4.35
235 236 2.364842 AGACATCCTCGCCAGGCT 60.365 61.111 10.54 0.00 40.12 4.58
236 237 2.107953 GAGACATCCTCGCCAGGC 59.892 66.667 0.00 0.00 40.12 4.85
237 238 0.250234 TTTGAGACATCCTCGCCAGG 59.750 55.000 0.00 0.00 44.92 4.45
238 239 2.099141 TTTTGAGACATCCTCGCCAG 57.901 50.000 0.00 0.00 44.92 4.85
239 240 2.559698 TTTTTGAGACATCCTCGCCA 57.440 45.000 0.00 0.00 44.92 5.69
259 260 5.106442 CCAAAACTGGCTAAGAACGTTTTT 58.894 37.500 9.22 9.22 36.11 1.94
260 261 4.440940 CCCAAAACTGGCTAAGAACGTTTT 60.441 41.667 0.46 0.00 38.04 2.43
261 262 3.067601 CCCAAAACTGGCTAAGAACGTTT 59.932 43.478 0.46 0.00 0.00 3.60
262 263 2.621526 CCCAAAACTGGCTAAGAACGTT 59.378 45.455 0.00 0.00 0.00 3.99
263 264 2.158726 TCCCAAAACTGGCTAAGAACGT 60.159 45.455 0.00 0.00 0.00 3.99
264 265 2.484264 CTCCCAAAACTGGCTAAGAACG 59.516 50.000 0.00 0.00 0.00 3.95
265 266 2.820197 CCTCCCAAAACTGGCTAAGAAC 59.180 50.000 0.00 0.00 0.00 3.01
266 267 2.817839 GCCTCCCAAAACTGGCTAAGAA 60.818 50.000 0.00 0.00 41.92 2.52
267 268 1.271926 GCCTCCCAAAACTGGCTAAGA 60.272 52.381 0.00 0.00 41.92 2.10
268 269 1.177401 GCCTCCCAAAACTGGCTAAG 58.823 55.000 0.00 0.00 41.92 2.18
269 270 3.356814 GCCTCCCAAAACTGGCTAA 57.643 52.632 0.00 0.00 41.92 3.09
272 273 0.540597 AGAAGCCTCCCAAAACTGGC 60.541 55.000 0.00 0.00 45.21 4.85
273 274 2.305927 TCTAGAAGCCTCCCAAAACTGG 59.694 50.000 0.00 0.00 0.00 4.00
274 275 3.703001 TCTAGAAGCCTCCCAAAACTG 57.297 47.619 0.00 0.00 0.00 3.16
275 276 4.104897 AGTTTCTAGAAGCCTCCCAAAACT 59.895 41.667 14.95 4.75 32.48 2.66
276 277 4.399219 AGTTTCTAGAAGCCTCCCAAAAC 58.601 43.478 14.95 2.55 0.00 2.43
277 278 4.724279 AGTTTCTAGAAGCCTCCCAAAA 57.276 40.909 14.95 0.00 0.00 2.44
278 279 4.506802 GGAAGTTTCTAGAAGCCTCCCAAA 60.507 45.833 20.79 0.00 29.20 3.28
279 280 3.009143 GGAAGTTTCTAGAAGCCTCCCAA 59.991 47.826 20.79 0.00 29.20 4.12
280 281 2.572104 GGAAGTTTCTAGAAGCCTCCCA 59.428 50.000 20.79 0.00 29.20 4.37
281 282 2.418884 CGGAAGTTTCTAGAAGCCTCCC 60.419 54.545 23.73 16.87 31.01 4.30
282 283 2.418884 CCGGAAGTTTCTAGAAGCCTCC 60.419 54.545 21.27 21.27 31.31 4.30
283 284 2.894902 CCGGAAGTTTCTAGAAGCCTC 58.105 52.381 14.95 11.79 0.00 4.70
284 285 1.066071 GCCGGAAGTTTCTAGAAGCCT 60.066 52.381 14.95 8.09 0.00 4.58
285 286 1.066071 AGCCGGAAGTTTCTAGAAGCC 60.066 52.381 14.95 9.86 0.00 4.35
286 287 2.388310 AGCCGGAAGTTTCTAGAAGC 57.612 50.000 5.05 11.09 0.00 3.86
287 288 4.722361 ACTAGCCGGAAGTTTCTAGAAG 57.278 45.455 5.05 0.00 34.27 2.85
288 289 5.479124 AAACTAGCCGGAAGTTTCTAGAA 57.521 39.130 22.69 0.00 42.09 2.10
289 290 5.245526 AGAAAACTAGCCGGAAGTTTCTAGA 59.754 40.000 26.28 0.00 44.35 2.43
290 291 5.480205 AGAAAACTAGCCGGAAGTTTCTAG 58.520 41.667 26.28 18.45 44.35 2.43
291 292 5.479124 AGAAAACTAGCCGGAAGTTTCTA 57.521 39.130 26.28 9.30 44.35 2.10
292 293 4.353383 AGAAAACTAGCCGGAAGTTTCT 57.647 40.909 26.28 21.80 44.35 2.52
293 294 4.275196 ACAAGAAAACTAGCCGGAAGTTTC 59.725 41.667 26.28 20.55 44.35 2.78
294 295 4.204799 ACAAGAAAACTAGCCGGAAGTTT 58.795 39.130 22.69 22.69 46.45 2.66
295 296 3.816994 ACAAGAAAACTAGCCGGAAGTT 58.183 40.909 5.05 11.59 38.82 2.66
296 297 3.487120 ACAAGAAAACTAGCCGGAAGT 57.513 42.857 5.05 4.50 0.00 3.01
297 298 4.320275 GGAAACAAGAAAACTAGCCGGAAG 60.320 45.833 5.05 3.69 0.00 3.46
298 299 3.566742 GGAAACAAGAAAACTAGCCGGAA 59.433 43.478 5.05 0.00 0.00 4.30
299 300 3.143728 GGAAACAAGAAAACTAGCCGGA 58.856 45.455 5.05 0.00 0.00 5.14
300 301 2.882137 TGGAAACAAGAAAACTAGCCGG 59.118 45.455 0.00 0.00 37.44 6.13
379 380 3.543460 GGACACAAAAAGTTCGTGAGACG 60.543 47.826 6.95 0.00 44.19 4.18
380 381 3.621715 AGGACACAAAAAGTTCGTGAGAC 59.378 43.478 6.95 0.00 41.84 3.36
381 382 3.621268 CAGGACACAAAAAGTTCGTGAGA 59.379 43.478 6.95 0.00 34.69 3.27
382 383 3.788797 GCAGGACACAAAAAGTTCGTGAG 60.789 47.826 6.95 0.00 34.69 3.51
383 384 2.096819 GCAGGACACAAAAAGTTCGTGA 59.903 45.455 6.95 0.00 34.69 4.35
384 385 2.450160 GCAGGACACAAAAAGTTCGTG 58.550 47.619 0.00 0.00 36.70 4.35
385 386 1.063469 CGCAGGACACAAAAAGTTCGT 59.937 47.619 0.00 0.00 0.00 3.85
386 387 1.063469 ACGCAGGACACAAAAAGTTCG 59.937 47.619 0.00 0.00 0.00 3.95
387 388 2.354821 AGACGCAGGACACAAAAAGTTC 59.645 45.455 0.00 0.00 0.00 3.01
388 389 2.354821 GAGACGCAGGACACAAAAAGTT 59.645 45.455 0.00 0.00 0.00 2.66
389 390 1.940613 GAGACGCAGGACACAAAAAGT 59.059 47.619 0.00 0.00 0.00 2.66
390 391 2.213499 AGAGACGCAGGACACAAAAAG 58.787 47.619 0.00 0.00 0.00 2.27
391 392 2.325583 AGAGACGCAGGACACAAAAA 57.674 45.000 0.00 0.00 0.00 1.94
392 393 2.210116 GAAGAGACGCAGGACACAAAA 58.790 47.619 0.00 0.00 0.00 2.44
393 394 1.540363 GGAAGAGACGCAGGACACAAA 60.540 52.381 0.00 0.00 0.00 2.83
394 395 0.033504 GGAAGAGACGCAGGACACAA 59.966 55.000 0.00 0.00 0.00 3.33
395 396 0.827925 AGGAAGAGACGCAGGACACA 60.828 55.000 0.00 0.00 0.00 3.72
396 397 0.109039 GAGGAAGAGACGCAGGACAC 60.109 60.000 0.00 0.00 0.00 3.67
397 398 0.251386 AGAGGAAGAGACGCAGGACA 60.251 55.000 0.00 0.00 0.00 4.02
398 399 0.454196 GAGAGGAAGAGACGCAGGAC 59.546 60.000 0.00 0.00 0.00 3.85
399 400 1.027255 CGAGAGGAAGAGACGCAGGA 61.027 60.000 0.00 0.00 0.00 3.86
400 401 1.309499 ACGAGAGGAAGAGACGCAGG 61.309 60.000 0.00 0.00 0.00 4.85
401 402 0.098025 GACGAGAGGAAGAGACGCAG 59.902 60.000 0.00 0.00 0.00 5.18
402 403 1.306642 GGACGAGAGGAAGAGACGCA 61.307 60.000 0.00 0.00 0.00 5.24
403 404 1.430228 GGACGAGAGGAAGAGACGC 59.570 63.158 0.00 0.00 0.00 5.19
404 405 0.740164 TCGGACGAGAGGAAGAGACG 60.740 60.000 0.00 0.00 0.00 4.18
405 406 1.451067 TTCGGACGAGAGGAAGAGAC 58.549 55.000 0.00 0.00 0.00 3.36
406 407 2.290464 GATTCGGACGAGAGGAAGAGA 58.710 52.381 0.00 0.00 0.00 3.10
407 408 1.335496 GGATTCGGACGAGAGGAAGAG 59.665 57.143 0.00 0.00 0.00 2.85
408 409 1.390565 GGATTCGGACGAGAGGAAGA 58.609 55.000 0.00 0.00 0.00 2.87
409 410 0.386113 GGGATTCGGACGAGAGGAAG 59.614 60.000 0.00 0.00 0.00 3.46
410 411 1.041447 GGGGATTCGGACGAGAGGAA 61.041 60.000 0.00 0.00 0.00 3.36
411 412 1.455217 GGGGATTCGGACGAGAGGA 60.455 63.158 0.00 0.00 0.00 3.71
412 413 1.455959 AGGGGATTCGGACGAGAGG 60.456 63.158 0.00 0.00 0.00 3.69
413 414 1.038130 ACAGGGGATTCGGACGAGAG 61.038 60.000 0.00 0.00 0.00 3.20
414 415 1.000019 ACAGGGGATTCGGACGAGA 60.000 57.895 0.00 0.00 0.00 4.04
415 416 1.038130 AGACAGGGGATTCGGACGAG 61.038 60.000 0.00 0.00 0.00 4.18
416 417 0.613853 AAGACAGGGGATTCGGACGA 60.614 55.000 0.00 0.00 0.00 4.20
417 418 0.249398 AAAGACAGGGGATTCGGACG 59.751 55.000 0.00 0.00 0.00 4.79
418 419 1.407025 GGAAAGACAGGGGATTCGGAC 60.407 57.143 0.00 0.00 0.00 4.79
419 420 0.909623 GGAAAGACAGGGGATTCGGA 59.090 55.000 0.00 0.00 0.00 4.55
420 421 0.462047 CGGAAAGACAGGGGATTCGG 60.462 60.000 0.00 0.00 0.00 4.30
421 422 0.535335 TCGGAAAGACAGGGGATTCG 59.465 55.000 0.00 0.00 0.00 3.34
422 423 2.565841 CATCGGAAAGACAGGGGATTC 58.434 52.381 0.00 0.00 0.00 2.52
423 424 1.212935 CCATCGGAAAGACAGGGGATT 59.787 52.381 0.00 0.00 0.00 3.01
424 425 0.839946 CCATCGGAAAGACAGGGGAT 59.160 55.000 0.00 0.00 0.00 3.85
425 426 1.910580 GCCATCGGAAAGACAGGGGA 61.911 60.000 0.00 0.00 0.00 4.81
426 427 1.452108 GCCATCGGAAAGACAGGGG 60.452 63.158 0.00 0.00 0.00 4.79
427 428 1.452108 GGCCATCGGAAAGACAGGG 60.452 63.158 0.00 0.00 0.00 4.45
428 429 1.815421 CGGCCATCGGAAAGACAGG 60.815 63.158 2.24 0.00 34.75 4.00
429 430 2.464459 GCGGCCATCGGAAAGACAG 61.464 63.158 2.24 0.00 39.69 3.51
430 431 2.435938 GCGGCCATCGGAAAGACA 60.436 61.111 2.24 0.00 39.69 3.41
431 432 2.125106 AGCGGCCATCGGAAAGAC 60.125 61.111 2.24 0.00 39.69 3.01
432 433 2.186903 GAGCGGCCATCGGAAAGA 59.813 61.111 2.24 0.00 39.69 2.52
433 434 1.884926 GAGAGCGGCCATCGGAAAG 60.885 63.158 2.24 0.00 39.69 2.62
434 435 2.186903 GAGAGCGGCCATCGGAAA 59.813 61.111 2.24 0.00 39.69 3.13
435 436 3.849951 GGAGAGCGGCCATCGGAA 61.850 66.667 2.24 0.00 39.69 4.30
437 438 4.899239 GTGGAGAGCGGCCATCGG 62.899 72.222 2.24 0.00 37.81 4.18
438 439 3.664025 TTGTGGAGAGCGGCCATCG 62.664 63.158 2.24 0.00 37.81 3.84
439 440 1.377202 TTTGTGGAGAGCGGCCATC 60.377 57.895 2.24 0.00 37.81 3.51
440 441 1.675641 GTTTGTGGAGAGCGGCCAT 60.676 57.895 2.24 0.00 37.81 4.40
441 442 2.281484 GTTTGTGGAGAGCGGCCA 60.281 61.111 2.24 0.00 0.00 5.36
442 443 3.423154 CGTTTGTGGAGAGCGGCC 61.423 66.667 0.00 0.00 0.00 6.13
443 444 3.423154 CCGTTTGTGGAGAGCGGC 61.423 66.667 0.00 0.00 35.90 6.53
444 445 3.423154 GCCGTTTGTGGAGAGCGG 61.423 66.667 0.00 0.00 44.60 5.52
445 446 3.777925 CGCCGTTTGTGGAGAGCG 61.778 66.667 0.00 0.00 37.39 5.03
446 447 2.665185 ACGCCGTTTGTGGAGAGC 60.665 61.111 0.00 0.00 32.53 4.09
447 448 1.284982 CTGACGCCGTTTGTGGAGAG 61.285 60.000 0.00 0.00 32.53 3.20
448 449 1.300620 CTGACGCCGTTTGTGGAGA 60.301 57.895 0.00 0.00 32.53 3.71
449 450 2.954753 GCTGACGCCGTTTGTGGAG 61.955 63.158 0.00 0.00 34.62 3.86
450 451 2.970324 GCTGACGCCGTTTGTGGA 60.970 61.111 0.00 0.00 0.00 4.02
451 452 2.513065 GATGCTGACGCCGTTTGTGG 62.513 60.000 0.00 0.00 34.43 4.17
452 453 1.154413 GATGCTGACGCCGTTTGTG 60.154 57.895 0.00 0.00 34.43 3.33
453 454 2.325082 GGATGCTGACGCCGTTTGT 61.325 57.895 0.00 0.00 34.43 2.83
454 455 1.970917 GAGGATGCTGACGCCGTTTG 61.971 60.000 0.00 0.00 34.43 2.93
455 456 1.741770 GAGGATGCTGACGCCGTTT 60.742 57.895 0.00 0.00 34.43 3.60
456 457 2.125512 GAGGATGCTGACGCCGTT 60.126 61.111 0.00 0.00 34.43 4.44
457 458 2.564553 GAAGAGGATGCTGACGCCGT 62.565 60.000 0.00 0.00 34.43 5.68
458 459 1.880340 GAAGAGGATGCTGACGCCG 60.880 63.158 0.00 0.00 34.43 6.46
459 460 1.522580 GGAAGAGGATGCTGACGCC 60.523 63.158 0.00 0.00 34.43 5.68
460 461 0.529555 GAGGAAGAGGATGCTGACGC 60.530 60.000 0.00 0.00 0.00 5.19
461 462 0.820226 TGAGGAAGAGGATGCTGACG 59.180 55.000 0.00 0.00 0.00 4.35
462 463 1.470632 CGTGAGGAAGAGGATGCTGAC 60.471 57.143 0.00 0.00 0.00 3.51
463 464 0.820226 CGTGAGGAAGAGGATGCTGA 59.180 55.000 0.00 0.00 0.00 4.26
464 465 0.534412 ACGTGAGGAAGAGGATGCTG 59.466 55.000 0.00 0.00 0.00 4.41
465 466 0.820871 GACGTGAGGAAGAGGATGCT 59.179 55.000 0.00 0.00 0.00 3.79
466 467 0.820871 AGACGTGAGGAAGAGGATGC 59.179 55.000 0.00 0.00 0.00 3.91
467 468 1.135915 CCAGACGTGAGGAAGAGGATG 59.864 57.143 0.00 0.00 0.00 3.51
468 469 1.479709 CCAGACGTGAGGAAGAGGAT 58.520 55.000 0.00 0.00 0.00 3.24
469 470 0.612174 CCCAGACGTGAGGAAGAGGA 60.612 60.000 0.00 0.00 0.00 3.71
470 471 1.893786 CCCAGACGTGAGGAAGAGG 59.106 63.158 0.00 0.00 0.00 3.69
471 472 1.216710 GCCCAGACGTGAGGAAGAG 59.783 63.158 0.00 0.00 0.00 2.85
472 473 2.636412 CGCCCAGACGTGAGGAAGA 61.636 63.158 0.00 0.00 0.00 2.87
473 474 2.125912 CGCCCAGACGTGAGGAAG 60.126 66.667 0.00 0.00 0.00 3.46
474 475 2.915659 ACGCCCAGACGTGAGGAA 60.916 61.111 0.00 0.00 46.28 3.36
482 483 4.148825 ATCGCCAGACGCCCAGAC 62.149 66.667 0.00 0.00 43.23 3.51
483 484 3.838271 GATCGCCAGACGCCCAGA 61.838 66.667 0.00 0.00 43.23 3.86
484 485 4.147449 TGATCGCCAGACGCCCAG 62.147 66.667 0.00 0.00 43.23 4.45
485 486 4.451150 GTGATCGCCAGACGCCCA 62.451 66.667 0.00 0.00 43.23 5.36
517 518 9.891828 TTTTGTTTCATAGTATCACACATTCAC 57.108 29.630 0.00 0.00 0.00 3.18
548 549 7.701539 TCATGCCATGTTTTCTAGTTTATGT 57.298 32.000 4.31 0.00 0.00 2.29
608 985 4.702131 ACAAGCCAGTTAGCCAGATTAAAG 59.298 41.667 0.00 0.00 0.00 1.85
612 989 2.887151 ACAAGCCAGTTAGCCAGATT 57.113 45.000 0.00 0.00 0.00 2.40
614 991 1.066143 GCTACAAGCCAGTTAGCCAGA 60.066 52.381 0.00 0.00 34.48 3.86
615 992 1.373570 GCTACAAGCCAGTTAGCCAG 58.626 55.000 0.00 0.00 34.48 4.85
616 993 0.391130 CGCTACAAGCCAGTTAGCCA 60.391 55.000 0.00 0.00 38.18 4.75
617 994 0.108329 TCGCTACAAGCCAGTTAGCC 60.108 55.000 0.00 0.00 38.18 3.93
618 995 1.661112 CTTCGCTACAAGCCAGTTAGC 59.339 52.381 0.00 0.00 38.18 3.09
619 996 2.271800 CCTTCGCTACAAGCCAGTTAG 58.728 52.381 0.00 0.00 38.18 2.34
620 997 1.674817 GCCTTCGCTACAAGCCAGTTA 60.675 52.381 0.00 0.00 38.18 2.24
621 998 0.955919 GCCTTCGCTACAAGCCAGTT 60.956 55.000 0.00 0.00 38.18 3.16
622 999 1.376037 GCCTTCGCTACAAGCCAGT 60.376 57.895 0.00 0.00 38.18 4.00
705 1082 2.159841 CGTTCATGTTGCTTAGTCCGTG 60.160 50.000 0.00 0.00 0.00 4.94
706 1083 2.066262 CGTTCATGTTGCTTAGTCCGT 58.934 47.619 0.00 0.00 0.00 4.69
747 1124 1.759445 AGACGCTTGCAGATCCATACT 59.241 47.619 0.00 0.00 0.00 2.12
748 1125 2.231215 AGACGCTTGCAGATCCATAC 57.769 50.000 0.00 0.00 0.00 2.39
749 1126 2.988010 AAGACGCTTGCAGATCCATA 57.012 45.000 0.00 0.00 0.00 2.74
769 1146 1.192803 GGACGTGGAAAGGAGGGAGT 61.193 60.000 0.00 0.00 0.00 3.85
822 1199 9.084533 AGTAATGATAGTTTAGAGTGGAGGATC 57.915 37.037 0.00 0.00 0.00 3.36
846 1223 9.451206 ACCTAGGTAGAGAGTTATTAGTCTAGT 57.549 37.037 14.41 0.00 34.15 2.57
851 1228 7.135591 ACGACCTAGGTAGAGAGTTATTAGT 57.864 40.000 26.75 0.00 0.00 2.24
853 1230 7.659390 GCTAACGACCTAGGTAGAGAGTTATTA 59.341 40.741 26.75 12.40 33.38 0.98
854 1231 6.486320 GCTAACGACCTAGGTAGAGAGTTATT 59.514 42.308 26.75 11.95 33.38 1.40
855 1232 5.997129 GCTAACGACCTAGGTAGAGAGTTAT 59.003 44.000 26.75 1.23 33.38 1.89
873 1250 0.517316 GGAAGTGCCAAGTGCTAACG 59.483 55.000 0.00 0.00 42.00 3.18
874 1251 0.517316 CGGAAGTGCCAAGTGCTAAC 59.483 55.000 0.00 0.00 42.00 2.34
875 1252 0.394938 TCGGAAGTGCCAAGTGCTAA 59.605 50.000 0.00 0.00 42.00 3.09
885 1262 8.700644 CATGTAGTATTAGTTAATCGGAAGTGC 58.299 37.037 0.00 0.00 0.00 4.40
891 1268 8.534333 ACATGCATGTAGTATTAGTTAATCGG 57.466 34.615 30.50 0.00 39.68 4.18
944 1321 1.139163 GTTGGCGATGCAAGTTTTGG 58.861 50.000 0.00 0.00 0.00 3.28
960 1338 5.004821 CGCAAACTGTATCTAGCTACTGTTG 59.995 44.000 22.04 17.70 40.62 3.33
962 1340 4.398358 TCGCAAACTGTATCTAGCTACTGT 59.602 41.667 9.66 9.66 35.91 3.55
983 1365 2.092429 TCCATTTTGATTCTCCCCCTCG 60.092 50.000 0.00 0.00 0.00 4.63
986 1368 2.670939 CCTCCATTTTGATTCTCCCCC 58.329 52.381 0.00 0.00 0.00 5.40
997 1379 0.251341 AGCAGTTCGCCCTCCATTTT 60.251 50.000 0.00 0.00 44.04 1.82
1111 1493 0.831711 GAGGAGAGGAGGATGGAGGC 60.832 65.000 0.00 0.00 0.00 4.70
1335 1717 3.068691 TCCTCCTTCCGCTGACCG 61.069 66.667 0.00 0.00 0.00 4.79
1337 1719 2.896443 CCTCCTCCTTCCGCTGAC 59.104 66.667 0.00 0.00 0.00 3.51
1746 2128 2.671682 GTCCACAGGCCCTTCTCC 59.328 66.667 0.00 0.00 0.00 3.71
2080 2462 0.602638 TCAAACAGCGCGAACTCCAT 60.603 50.000 12.10 0.00 0.00 3.41
2124 2506 4.069232 TCGAGCCAGAACAGCCCG 62.069 66.667 0.00 0.00 32.13 6.13
2175 2557 3.194861 GTGAAGCATTGGAGCATACGTA 58.805 45.455 0.00 0.00 36.85 3.57
2181 2563 2.334946 GCGGTGAAGCATTGGAGCA 61.335 57.895 0.00 0.00 36.85 4.26
2295 2677 4.937620 TGTTCTTGCCTAAGTCATGTCATC 59.062 41.667 0.00 0.00 35.38 2.92
2339 2733 1.601903 CAGCAGTACTTCGGTTGCAAA 59.398 47.619 0.00 0.00 34.99 3.68
2341 2735 0.602638 CCAGCAGTACTTCGGTTGCA 60.603 55.000 0.00 0.00 34.99 4.08
2381 2793 8.624367 TTGTTCTGTTTCCCGATAGATAAAAA 57.376 30.769 0.00 0.00 39.76 1.94
2384 2796 8.801882 AAATTGTTCTGTTTCCCGATAGATAA 57.198 30.769 0.00 0.00 39.76 1.75
2430 2844 6.377996 TGAGTAGGGCAAAATAGTACGAAGTA 59.622 38.462 0.00 0.00 45.11 2.24
2432 2846 5.657474 TGAGTAGGGCAAAATAGTACGAAG 58.343 41.667 0.00 0.00 0.00 3.79
2438 2852 6.721318 TGAGAATTGAGTAGGGCAAAATAGT 58.279 36.000 0.00 0.00 0.00 2.12
2465 2879 9.668497 AATGGTAGGAGTAGTAAACTTGAATTC 57.332 33.333 0.00 0.00 39.07 2.17
2476 2890 9.483489 TCAGAAATAACAATGGTAGGAGTAGTA 57.517 33.333 0.00 0.00 0.00 1.82
2491 2905 9.569167 CGTAGATAGTTGAGTTCAGAAATAACA 57.431 33.333 7.69 0.00 0.00 2.41
2547 2961 4.742438 TGCTTTAGGAATGTCGAACAAC 57.258 40.909 0.00 0.00 0.00 3.32
2573 2987 2.446435 AGTGGATTGTTTGGATTCGGG 58.554 47.619 0.00 0.00 0.00 5.14
2639 3053 2.542411 GCACTGTTTGGCTTGAGACAAG 60.542 50.000 7.07 7.07 44.95 3.16
2663 3077 2.159430 TGAGTTTGCGATCAACAATCCG 59.841 45.455 0.00 0.00 30.75 4.18
2676 3090 5.215160 AGTCAAATGTTCGATTGAGTTTGC 58.785 37.500 0.00 7.57 36.12 3.68
2739 3153 5.321934 ACGGAGGGAGTATAATGTACTCT 57.678 43.478 15.13 0.00 42.54 3.24
2758 3172 6.856135 AAAAAGAGTTACACTTAGGAACGG 57.144 37.500 0.00 0.00 0.00 4.44
2898 3312 3.581332 TCCCTCAATAGACACTTCCGTTT 59.419 43.478 0.00 0.00 0.00 3.60
2905 3319 7.235812 GGTTCCTATAATCCCTCAATAGACACT 59.764 40.741 0.00 0.00 0.00 3.55
2907 3321 7.313731 AGGTTCCTATAATCCCTCAATAGACA 58.686 38.462 0.00 0.00 0.00 3.41
2913 3327 6.935036 AGACTAGGTTCCTATAATCCCTCAA 58.065 40.000 0.00 0.00 0.00 3.02
2914 3328 6.547396 AGACTAGGTTCCTATAATCCCTCA 57.453 41.667 0.00 0.00 0.00 3.86
2952 3366 0.689055 ACCAGTCTCTCTGCATTGCA 59.311 50.000 11.50 11.50 42.38 4.08
2985 3399 1.352352 CCTCCCCACTTGTGTCAAGAT 59.648 52.381 15.04 0.00 0.00 2.40
2991 3405 0.765510 GAAGTCCTCCCCACTTGTGT 59.234 55.000 0.00 0.00 34.10 3.72
3054 3468 4.406456 TCACATCCTTTGGCTATTTGTGT 58.594 39.130 0.00 0.00 35.63 3.72
3092 3506 7.066525 GCAATACATAGTTGGGTTTAGCAAGTA 59.933 37.037 0.00 0.00 0.00 2.24
3107 3521 5.116084 ACTTGTCATGGGCAATACATAGT 57.884 39.130 0.00 0.00 0.00 2.12
3108 3522 5.824624 AGAACTTGTCATGGGCAATACATAG 59.175 40.000 0.00 0.00 0.00 2.23
3110 3524 4.603131 AGAACTTGTCATGGGCAATACAT 58.397 39.130 0.00 0.00 0.00 2.29
3112 3526 5.590259 ACATAGAACTTGTCATGGGCAATAC 59.410 40.000 0.00 0.00 0.00 1.89
3117 3531 5.368145 TCATACATAGAACTTGTCATGGGC 58.632 41.667 0.00 0.00 0.00 5.36
3145 3572 6.492254 ACTTTCGAGTGTTGTTAAATTGGAC 58.508 36.000 0.00 0.00 0.00 4.02
3203 3630 9.555727 GGAAGTAAGATTGGCAATACATAGTTA 57.444 33.333 13.65 2.27 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.