Multiple sequence alignment - TraesCS7A01G318100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7A01G318100 chr7A 100.000 2352 0 0 1 2352 458756137 458758488 0.000000e+00 4344.0
1 TraesCS7A01G318100 chr7A 89.697 165 15 1 185 349 76832352 76832190 2.370000e-50 209.0
2 TraesCS7A01G318100 chr7D 93.187 1365 50 11 1 1359 400867196 400868523 0.000000e+00 1965.0
3 TraesCS7A01G318100 chr7D 86.018 329 42 3 1341 1668 400868540 400868865 1.340000e-92 350.0
4 TraesCS7A01G318100 chrUn 91.923 520 24 5 749 1267 86411301 86411803 0.000000e+00 712.0
5 TraesCS7A01G318100 chrUn 83.830 470 63 9 1365 1823 86411868 86412335 3.590000e-118 435.0
6 TraesCS7A01G318100 chrUn 92.359 301 22 1 343 643 86403910 86404209 6.010000e-116 427.0
7 TraesCS7A01G318100 chrUn 86.022 186 16 7 1 181 86403743 86403923 8.580000e-45 191.0
8 TraesCS7A01G318100 chrUn 92.405 79 5 1 1 79 86401683 86401760 6.870000e-21 111.0
9 TraesCS7A01G318100 chrUn 93.548 62 4 0 697 758 86406508 86406569 2.490000e-15 93.5
10 TraesCS7A01G318100 chrUn 97.297 37 1 0 55 91 86403833 86403797 1.950000e-06 63.9
11 TraesCS7A01G318100 chr4A 91.667 168 14 0 185 352 742423813 742423980 1.410000e-57 233.0
12 TraesCS7A01G318100 chr1A 91.566 166 14 0 185 350 584997109 584996944 1.820000e-56 230.0
13 TraesCS7A01G318100 chr1D 90.419 167 14 2 185 350 427825886 427826051 3.940000e-53 219.0
14 TraesCS7A01G318100 chr3D 89.820 167 17 0 185 351 609241892 609241726 5.090000e-52 215.0
15 TraesCS7A01G318100 chr7B 89.820 167 16 1 185 350 746157753 746157587 1.830000e-51 213.0
16 TraesCS7A01G318100 chr5B 89.222 167 18 0 183 349 93221578 93221412 2.370000e-50 209.0
17 TraesCS7A01G318100 chr2D 88.068 176 20 1 188 362 639533856 639533681 8.520000e-50 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7A01G318100 chr7A 458756137 458758488 2351 False 4344.000 4344 100.0000 1 2352 1 chr7A.!!$F1 2351
1 TraesCS7A01G318100 chr7D 400867196 400868865 1669 False 1157.500 1965 89.6025 1 1668 2 chr7D.!!$F1 1667
2 TraesCS7A01G318100 chrUn 86411301 86412335 1034 False 573.500 712 87.8765 749 1823 2 chrUn.!!$F2 1074
3 TraesCS7A01G318100 chrUn 86401683 86406569 4886 False 205.625 427 91.0835 1 758 4 chrUn.!!$F1 757

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
981 5292 0.865111 GTGCTTGTGTGCGTGACATA 59.135 50.0 0.0 0.0 36.78 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1979 6367 0.030101 CCAACAACATTGCCGACGTT 59.97 50.0 0.0 0.0 0.0 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 1.134491 TGATGACATGCCTCTCTGCAG 60.134 52.381 7.63 7.63 45.93 4.41
113 2174 8.422577 AGGGCTCAACTTTTTAAACTGAATAT 57.577 30.769 0.00 0.00 0.00 1.28
155 2216 2.026822 AGTGTCTCCTTGTATTGGCTGG 60.027 50.000 0.00 0.00 0.00 4.85
181 2242 7.031226 ACAATTTGTGATGTGCCATAGATAC 57.969 36.000 0.15 0.00 0.00 2.24
200 2261 2.494059 ACACGAGCAGTTTTAGCATGT 58.506 42.857 0.00 0.00 0.00 3.21
211 2272 5.705441 CAGTTTTAGCATGTTCCCTCTTACA 59.295 40.000 0.00 0.00 0.00 2.41
212 2273 6.375455 CAGTTTTAGCATGTTCCCTCTTACAT 59.625 38.462 0.00 0.00 35.45 2.29
223 2284 4.635473 TCCCTCTTACATCCTCTTTCCAT 58.365 43.478 0.00 0.00 0.00 3.41
271 2332 4.769688 TCTGAGCCGTTGATCACATTAAT 58.230 39.130 0.00 0.00 32.50 1.40
461 2522 4.874970 AGAACACAATTTGCATTCCTGTC 58.125 39.130 8.76 0.00 0.00 3.51
601 2662 3.975670 GTCCTAGCTTCGTCATCGTTATG 59.024 47.826 0.00 0.00 38.33 1.90
632 2693 7.498570 GGGTCCGGTGTACAATACAATATTTTA 59.501 37.037 0.00 0.00 40.93 1.52
831 5141 2.222819 CGTTGCCGCAGTTAAATCTCTC 60.223 50.000 0.00 0.00 0.00 3.20
832 5142 3.003480 GTTGCCGCAGTTAAATCTCTCT 58.997 45.455 0.00 0.00 0.00 3.10
900 5210 3.202373 GCCTATTTCCTCCCTTACCAAGT 59.798 47.826 0.00 0.00 0.00 3.16
901 5211 4.325109 GCCTATTTCCTCCCTTACCAAGTT 60.325 45.833 0.00 0.00 0.00 2.66
902 5212 5.104235 GCCTATTTCCTCCCTTACCAAGTTA 60.104 44.000 0.00 0.00 0.00 2.24
903 5213 6.354938 CCTATTTCCTCCCTTACCAAGTTAC 58.645 44.000 0.00 0.00 0.00 2.50
904 5214 4.645863 TTTCCTCCCTTACCAAGTTACC 57.354 45.455 0.00 0.00 0.00 2.85
905 5215 3.278987 TCCTCCCTTACCAAGTTACCA 57.721 47.619 0.00 0.00 0.00 3.25
906 5216 3.600433 TCCTCCCTTACCAAGTTACCAA 58.400 45.455 0.00 0.00 0.00 3.67
907 5217 3.585732 TCCTCCCTTACCAAGTTACCAAG 59.414 47.826 0.00 0.00 0.00 3.61
908 5218 3.329814 CCTCCCTTACCAAGTTACCAAGT 59.670 47.826 0.00 0.00 0.00 3.16
912 5222 4.445162 CCCTTACCAAGTTACCAAGTCACA 60.445 45.833 0.00 0.00 0.00 3.58
980 5291 1.094650 TGTGCTTGTGTGCGTGACAT 61.095 50.000 0.00 0.00 36.78 3.06
981 5292 0.865111 GTGCTTGTGTGCGTGACATA 59.135 50.000 0.00 0.00 36.78 2.29
982 5293 1.136252 GTGCTTGTGTGCGTGACATAG 60.136 52.381 0.00 0.00 36.78 2.23
983 5294 1.270041 TGCTTGTGTGCGTGACATAGA 60.270 47.619 0.00 0.00 36.78 1.98
984 5295 1.798223 GCTTGTGTGCGTGACATAGAA 59.202 47.619 0.00 0.00 36.78 2.10
985 5296 2.223144 GCTTGTGTGCGTGACATAGAAA 59.777 45.455 0.00 0.00 36.78 2.52
986 5297 3.120199 GCTTGTGTGCGTGACATAGAAAT 60.120 43.478 0.00 0.00 36.78 2.17
1003 5314 9.844257 ACATAGAAATTAGAAAAGGAGAGATGG 57.156 33.333 0.00 0.00 0.00 3.51
1165 5476 0.749649 CGCCATCCTCTACTTCTGCT 59.250 55.000 0.00 0.00 0.00 4.24
1234 5545 2.205691 CCCGGTCCAGTAGGGTAAC 58.794 63.158 0.00 0.00 40.27 2.50
1253 5565 1.063867 ACTATGTGCCTACTCTCCGGT 60.064 52.381 0.00 0.00 0.00 5.28
1290 5602 1.118838 TTTGTTTGAACAGGGGCAGG 58.881 50.000 0.00 0.00 40.50 4.85
1316 5628 4.684134 GGCCCCAGAAGCTGCCAA 62.684 66.667 5.66 0.00 43.46 4.52
1378 5730 8.458573 TTGTTTGCCTGTCTTTCTATCTTTTA 57.541 30.769 0.00 0.00 0.00 1.52
1379 5731 8.099364 TGTTTGCCTGTCTTTCTATCTTTTAG 57.901 34.615 0.00 0.00 0.00 1.85
1402 5779 6.226787 AGACACAGAACTAAGTGAGAAATGG 58.773 40.000 0.00 0.00 39.03 3.16
1496 5880 8.986477 AATTGGTTCCTATTGATTTTTCTTCG 57.014 30.769 0.00 0.00 0.00 3.79
1512 5896 3.125573 CGCACTCGAGGTCGGAGA 61.126 66.667 18.41 0.00 40.29 3.71
1533 5917 6.228616 AGAACCAGTCTATTTCTTAGGAGC 57.771 41.667 0.00 0.00 33.56 4.70
1537 5921 3.071747 CAGTCTATTTCTTAGGAGCCCCC 59.928 52.174 0.00 0.00 0.00 5.40
1547 5931 2.593956 GGAGCCCCCGTGAAGAGTT 61.594 63.158 0.00 0.00 0.00 3.01
1569 5953 1.168714 GCGCTCCTTTCTTCAATGGT 58.831 50.000 0.00 0.00 0.00 3.55
1580 5964 2.158885 TCTTCAATGGTGTTCGGTGTCA 60.159 45.455 0.00 0.00 0.00 3.58
1587 5971 1.586826 TGTTCGGTGTCACGTCACG 60.587 57.895 0.00 0.00 39.00 4.35
1606 5990 0.685660 GTCGACAACCCTTCTTCCCT 59.314 55.000 11.55 0.00 0.00 4.20
1608 5992 1.772453 TCGACAACCCTTCTTCCCTTT 59.228 47.619 0.00 0.00 0.00 3.11
1612 5996 0.860457 AACCCTTCTTCCCTTTGCCT 59.140 50.000 0.00 0.00 0.00 4.75
1616 6000 1.479389 CCTTCTTCCCTTTGCCTGTGT 60.479 52.381 0.00 0.00 0.00 3.72
1642 6026 7.656948 TCTGATGTTCAAAATTTGGGATTGTTC 59.343 33.333 5.83 0.00 0.00 3.18
1652 6036 1.144093 TGGGATTGTTCCGTTTGGTCT 59.856 47.619 0.00 0.00 43.63 3.85
1669 6053 3.008923 TGGTCTATTGACATGTCTGCCAA 59.991 43.478 25.55 13.16 44.61 4.52
1672 6056 2.592102 ATTGACATGTCTGCCAACCT 57.408 45.000 25.55 0.00 26.81 3.50
1675 6059 1.160137 GACATGTCTGCCAACCTGTC 58.840 55.000 18.83 7.77 37.54 3.51
1677 6061 0.320683 CATGTCTGCCAACCTGTCGA 60.321 55.000 0.00 0.00 0.00 4.20
1684 6068 1.271871 TGCCAACCTGTCGATCCAATT 60.272 47.619 0.00 0.00 0.00 2.32
1688 6072 0.744414 ACCTGTCGATCCAATTGGCG 60.744 55.000 20.33 17.80 34.44 5.69
1725 6109 1.082117 ACGCCCGAGCTTATGAAACG 61.082 55.000 0.00 0.00 36.60 3.60
1731 6115 1.582502 CGAGCTTATGAAACGTCGTCC 59.417 52.381 0.00 0.00 0.00 4.79
1733 6117 1.004595 GCTTATGAAACGTCGTCCCC 58.995 55.000 0.00 0.00 0.00 4.81
1737 6121 0.037605 ATGAAACGTCGTCCCCAGAC 60.038 55.000 0.00 0.00 39.83 3.51
1742 6126 0.037303 ACGTCGTCCCCAGACTCTAA 59.963 55.000 0.00 0.00 41.16 2.10
1743 6127 1.340795 ACGTCGTCCCCAGACTCTAAT 60.341 52.381 0.00 0.00 41.16 1.73
1748 6135 0.267960 TCCCCAGACTCTAATCCCCC 59.732 60.000 0.00 0.00 0.00 5.40
1749 6136 0.269173 CCCCAGACTCTAATCCCCCT 59.731 60.000 0.00 0.00 0.00 4.79
1752 6139 0.761802 CAGACTCTAATCCCCCTGGC 59.238 60.000 0.00 0.00 0.00 4.85
1785 6173 0.108138 GCCACAGGCGATACAAGAGT 60.108 55.000 0.00 0.00 39.62 3.24
1793 6181 2.531206 GCGATACAAGAGTGACCTGAC 58.469 52.381 0.00 0.00 0.00 3.51
1796 6184 1.640917 TACAAGAGTGACCTGACCCC 58.359 55.000 0.00 0.00 0.00 4.95
1802 6190 4.270153 TGACCTGACCCCAGCCCT 62.270 66.667 0.00 0.00 39.07 5.19
1803 6191 2.040606 GACCTGACCCCAGCCCTA 59.959 66.667 0.00 0.00 39.07 3.53
1807 6195 4.326227 TGACCCCAGCCCTACCGT 62.326 66.667 0.00 0.00 0.00 4.83
1809 6197 4.326227 ACCCCAGCCCTACCGTCA 62.326 66.667 0.00 0.00 0.00 4.35
1812 6200 3.782443 CCAGCCCTACCGTCACCC 61.782 72.222 0.00 0.00 0.00 4.61
1814 6202 4.007323 AGCCCTACCGTCACCCCT 62.007 66.667 0.00 0.00 0.00 4.79
1818 6206 2.762875 CTACCGTCACCCCTCCCC 60.763 72.222 0.00 0.00 0.00 4.81
1823 6211 4.026357 GTCACCCCTCCCCCTCCT 62.026 72.222 0.00 0.00 0.00 3.69
1824 6212 3.695825 TCACCCCTCCCCCTCCTC 61.696 72.222 0.00 0.00 0.00 3.71
1825 6213 3.700350 CACCCCTCCCCCTCCTCT 61.700 72.222 0.00 0.00 0.00 3.69
1826 6214 3.369388 ACCCCTCCCCCTCCTCTC 61.369 72.222 0.00 0.00 0.00 3.20
1827 6215 3.368501 CCCCTCCCCCTCCTCTCA 61.369 72.222 0.00 0.00 0.00 3.27
1828 6216 2.041405 CCCTCCCCCTCCTCTCAC 60.041 72.222 0.00 0.00 0.00 3.51
1829 6217 2.780693 CCTCCCCCTCCTCTCACA 59.219 66.667 0.00 0.00 0.00 3.58
1830 6218 1.316266 CCTCCCCCTCCTCTCACAT 59.684 63.158 0.00 0.00 0.00 3.21
1831 6219 1.053264 CCTCCCCCTCCTCTCACATG 61.053 65.000 0.00 0.00 0.00 3.21
1832 6220 1.690633 TCCCCCTCCTCTCACATGC 60.691 63.158 0.00 0.00 0.00 4.06
1833 6221 1.997311 CCCCCTCCTCTCACATGCA 60.997 63.158 0.00 0.00 0.00 3.96
1834 6222 1.351080 CCCCCTCCTCTCACATGCAT 61.351 60.000 0.00 0.00 0.00 3.96
1835 6223 0.179026 CCCCTCCTCTCACATGCATG 60.179 60.000 25.09 25.09 0.00 4.06
1836 6224 0.818445 CCCTCCTCTCACATGCATGC 60.818 60.000 26.53 11.82 0.00 4.06
1837 6225 0.818445 CCTCCTCTCACATGCATGCC 60.818 60.000 26.53 0.00 0.00 4.40
1838 6226 1.153309 TCCTCTCACATGCATGCCG 60.153 57.895 26.53 17.58 0.00 5.69
1839 6227 1.450848 CCTCTCACATGCATGCCGT 60.451 57.895 26.53 9.81 0.00 5.68
1840 6228 1.434622 CCTCTCACATGCATGCCGTC 61.435 60.000 26.53 0.00 0.00 4.79
1841 6229 0.461516 CTCTCACATGCATGCCGTCT 60.462 55.000 26.53 3.52 0.00 4.18
1842 6230 0.036105 TCTCACATGCATGCCGTCTT 60.036 50.000 26.53 2.71 0.00 3.01
1843 6231 0.098200 CTCACATGCATGCCGTCTTG 59.902 55.000 26.53 15.62 0.00 3.02
1844 6232 1.515519 CACATGCATGCCGTCTTGC 60.516 57.895 26.53 0.00 41.96 4.01
1845 6233 2.277692 CATGCATGCCGTCTTGCG 60.278 61.111 14.93 0.00 43.81 4.85
1846 6234 2.436469 ATGCATGCCGTCTTGCGA 60.436 55.556 16.68 0.00 43.81 5.10
1847 6235 2.039974 ATGCATGCCGTCTTGCGAA 61.040 52.632 16.68 0.00 43.81 4.70
1848 6236 1.985447 ATGCATGCCGTCTTGCGAAG 61.985 55.000 16.68 0.00 43.81 3.79
1849 6237 2.787249 CATGCCGTCTTGCGAAGG 59.213 61.111 0.00 0.00 44.77 3.46
1850 6238 2.034879 CATGCCGTCTTGCGAAGGT 61.035 57.895 0.00 0.00 44.77 3.50
1851 6239 0.739462 CATGCCGTCTTGCGAAGGTA 60.739 55.000 0.00 0.00 44.77 3.08
1852 6240 0.178068 ATGCCGTCTTGCGAAGGTAT 59.822 50.000 0.00 0.00 44.77 2.73
1853 6241 0.459585 TGCCGTCTTGCGAAGGTATC 60.460 55.000 0.00 0.00 44.77 2.24
1863 6251 1.006832 CGAAGGTATCGTTGCAAGGG 58.993 55.000 18.38 5.23 46.52 3.95
1864 6252 1.379527 GAAGGTATCGTTGCAAGGGG 58.620 55.000 18.38 2.65 0.00 4.79
1865 6253 0.034477 AAGGTATCGTTGCAAGGGGG 60.034 55.000 18.38 0.12 0.00 5.40
1866 6254 0.912487 AGGTATCGTTGCAAGGGGGA 60.912 55.000 18.38 5.68 0.00 4.81
1867 6255 0.463833 GGTATCGTTGCAAGGGGGAG 60.464 60.000 18.38 0.00 0.00 4.30
1868 6256 0.463833 GTATCGTTGCAAGGGGGAGG 60.464 60.000 18.38 0.00 0.00 4.30
1869 6257 1.632018 TATCGTTGCAAGGGGGAGGG 61.632 60.000 18.38 0.00 0.00 4.30
1879 6267 4.410400 GGGGAGGGCGGTGTTCTG 62.410 72.222 0.00 0.00 0.00 3.02
1880 6268 4.410400 GGGAGGGCGGTGTTCTGG 62.410 72.222 0.00 0.00 0.00 3.86
1882 6270 4.021925 GAGGGCGGTGTTCTGGCT 62.022 66.667 0.00 0.00 43.77 4.75
1883 6271 3.959991 GAGGGCGGTGTTCTGGCTC 62.960 68.421 0.00 0.00 43.77 4.70
1884 6272 4.329545 GGGCGGTGTTCTGGCTCA 62.330 66.667 0.00 0.00 43.77 4.26
1885 6273 3.050275 GGCGGTGTTCTGGCTCAC 61.050 66.667 0.00 0.00 41.50 3.51
1886 6274 2.280797 GCGGTGTTCTGGCTCACA 60.281 61.111 0.00 0.00 36.43 3.58
1894 6282 2.985456 CTGGCTCACAGTCCTCCC 59.015 66.667 0.00 0.00 42.42 4.30
1895 6283 1.611851 CTGGCTCACAGTCCTCCCT 60.612 63.158 0.00 0.00 42.42 4.20
1896 6284 0.324738 CTGGCTCACAGTCCTCCCTA 60.325 60.000 0.00 0.00 42.42 3.53
1897 6285 0.324738 TGGCTCACAGTCCTCCCTAG 60.325 60.000 0.00 0.00 0.00 3.02
1898 6286 0.033011 GGCTCACAGTCCTCCCTAGA 60.033 60.000 0.00 0.00 0.00 2.43
1899 6287 1.398692 GCTCACAGTCCTCCCTAGAG 58.601 60.000 0.00 0.00 40.09 2.43
1911 6299 4.399004 CTCCCTAGAGGTGTCATTCAAG 57.601 50.000 0.00 0.00 36.39 3.02
1912 6300 3.107601 TCCCTAGAGGTGTCATTCAAGG 58.892 50.000 0.00 0.00 36.75 3.61
1913 6301 2.171448 CCCTAGAGGTGTCATTCAAGGG 59.829 54.545 0.00 0.00 36.73 3.95
1914 6302 3.107601 CCTAGAGGTGTCATTCAAGGGA 58.892 50.000 0.00 0.00 0.00 4.20
1915 6303 3.519510 CCTAGAGGTGTCATTCAAGGGAA 59.480 47.826 0.00 0.00 37.45 3.97
1916 6304 3.710209 AGAGGTGTCATTCAAGGGAAG 57.290 47.619 0.00 0.00 36.25 3.46
1917 6305 2.307098 AGAGGTGTCATTCAAGGGAAGG 59.693 50.000 0.00 0.00 36.25 3.46
1918 6306 1.355720 AGGTGTCATTCAAGGGAAGGG 59.644 52.381 0.00 0.00 35.59 3.95
1919 6307 1.075536 GGTGTCATTCAAGGGAAGGGT 59.924 52.381 0.00 0.00 35.59 4.34
1920 6308 2.162681 GTGTCATTCAAGGGAAGGGTG 58.837 52.381 0.00 0.00 35.59 4.61
1921 6309 1.075374 TGTCATTCAAGGGAAGGGTGG 59.925 52.381 0.00 0.00 35.59 4.61
1922 6310 0.704076 TCATTCAAGGGAAGGGTGGG 59.296 55.000 0.00 0.00 35.59 4.61
1923 6311 0.324645 CATTCAAGGGAAGGGTGGGG 60.325 60.000 0.00 0.00 36.25 4.96
1924 6312 1.518431 ATTCAAGGGAAGGGTGGGGG 61.518 60.000 0.00 0.00 36.25 5.40
1941 6329 4.038080 GGTTTTGGACCCGCTGCG 62.038 66.667 16.34 16.34 43.06 5.18
1942 6330 2.975799 GTTTTGGACCCGCTGCGA 60.976 61.111 25.45 0.00 0.00 5.10
1943 6331 2.668212 TTTTGGACCCGCTGCGAG 60.668 61.111 25.45 13.91 0.00 5.03
1944 6332 4.697756 TTTGGACCCGCTGCGAGG 62.698 66.667 25.45 23.55 0.00 4.63
1948 6336 4.681978 GACCCGCTGCGAGGTGTT 62.682 66.667 30.39 13.35 36.17 3.32
1949 6337 4.250305 ACCCGCTGCGAGGTGTTT 62.250 61.111 26.64 8.84 34.20 2.83
1950 6338 2.978010 CCCGCTGCGAGGTGTTTT 60.978 61.111 25.45 0.00 0.00 2.43
1951 6339 2.252260 CCGCTGCGAGGTGTTTTG 59.748 61.111 25.45 0.00 0.00 2.44
1952 6340 2.542907 CCGCTGCGAGGTGTTTTGT 61.543 57.895 25.45 0.00 0.00 2.83
1953 6341 1.369209 CGCTGCGAGGTGTTTTGTG 60.369 57.895 18.66 0.00 0.00 3.33
1954 6342 1.008538 GCTGCGAGGTGTTTTGTGG 60.009 57.895 0.00 0.00 0.00 4.17
1955 6343 1.008538 CTGCGAGGTGTTTTGTGGC 60.009 57.895 0.00 0.00 0.00 5.01
1956 6344 2.051345 GCGAGGTGTTTTGTGGCG 60.051 61.111 0.00 0.00 0.00 5.69
1957 6345 2.051345 CGAGGTGTTTTGTGGCGC 60.051 61.111 0.00 0.00 0.00 6.53
1958 6346 2.335011 GAGGTGTTTTGTGGCGCC 59.665 61.111 22.73 22.73 35.63 6.53
1959 6347 3.536498 GAGGTGTTTTGTGGCGCCG 62.536 63.158 23.90 0.00 40.00 6.46
1960 6348 4.639171 GGTGTTTTGTGGCGCCGG 62.639 66.667 23.90 0.00 0.00 6.13
1994 6382 4.838959 GGAACGTCGGCAATGTTG 57.161 55.556 0.00 0.00 37.22 3.33
1995 6383 1.946267 GGAACGTCGGCAATGTTGT 59.054 52.632 0.00 0.00 37.22 3.32
1996 6384 0.309612 GGAACGTCGGCAATGTTGTT 59.690 50.000 0.00 0.00 37.22 2.83
1997 6385 1.394697 GAACGTCGGCAATGTTGTTG 58.605 50.000 0.00 0.00 37.22 3.33
1998 6386 0.030101 AACGTCGGCAATGTTGTTGG 59.970 50.000 0.00 0.00 35.73 3.77
1999 6387 1.729131 CGTCGGCAATGTTGTTGGC 60.729 57.895 4.46 4.46 41.00 4.52
2000 6388 1.361993 GTCGGCAATGTTGTTGGCA 59.638 52.632 13.53 0.00 44.11 4.92
2001 6389 0.249238 GTCGGCAATGTTGTTGGCAA 60.249 50.000 13.53 0.00 44.11 4.52
2002 6390 0.031857 TCGGCAATGTTGTTGGCAAG 59.968 50.000 0.00 0.00 44.11 4.01
2003 6391 0.249405 CGGCAATGTTGTTGGCAAGT 60.249 50.000 0.00 0.00 44.11 3.16
2004 6392 1.805871 CGGCAATGTTGTTGGCAAGTT 60.806 47.619 0.00 0.00 44.11 2.66
2005 6393 1.598601 GGCAATGTTGTTGGCAAGTTG 59.401 47.619 0.00 0.00 43.47 3.16
2006 6394 1.598601 GCAATGTTGTTGGCAAGTTGG 59.401 47.619 0.00 0.00 34.57 3.77
2007 6395 2.903798 CAATGTTGTTGGCAAGTTGGT 58.096 42.857 0.00 0.00 34.94 3.67
2008 6396 3.269178 CAATGTTGTTGGCAAGTTGGTT 58.731 40.909 0.00 0.00 34.94 3.67
2009 6397 2.663826 TGTTGTTGGCAAGTTGGTTC 57.336 45.000 0.00 0.00 34.94 3.62
2010 6398 2.175202 TGTTGTTGGCAAGTTGGTTCT 58.825 42.857 0.00 0.00 34.94 3.01
2011 6399 2.564947 TGTTGTTGGCAAGTTGGTTCTT 59.435 40.909 0.00 0.00 34.94 2.52
2012 6400 3.186909 GTTGTTGGCAAGTTGGTTCTTC 58.813 45.455 0.00 0.00 34.94 2.87
2013 6401 2.733956 TGTTGGCAAGTTGGTTCTTCT 58.266 42.857 0.00 0.00 0.00 2.85
2014 6402 3.892284 TGTTGGCAAGTTGGTTCTTCTA 58.108 40.909 0.00 0.00 0.00 2.10
2015 6403 4.469657 TGTTGGCAAGTTGGTTCTTCTAT 58.530 39.130 0.00 0.00 0.00 1.98
2016 6404 5.626142 TGTTGGCAAGTTGGTTCTTCTATA 58.374 37.500 0.00 0.00 0.00 1.31
2017 6405 6.065374 TGTTGGCAAGTTGGTTCTTCTATAA 58.935 36.000 0.00 0.00 0.00 0.98
2018 6406 6.719370 TGTTGGCAAGTTGGTTCTTCTATAAT 59.281 34.615 0.00 0.00 0.00 1.28
2019 6407 6.757897 TGGCAAGTTGGTTCTTCTATAATG 57.242 37.500 4.75 0.00 0.00 1.90
2020 6408 6.480763 TGGCAAGTTGGTTCTTCTATAATGA 58.519 36.000 4.75 0.00 0.00 2.57
2021 6409 7.118723 TGGCAAGTTGGTTCTTCTATAATGAT 58.881 34.615 4.75 0.00 0.00 2.45
2022 6410 7.615365 TGGCAAGTTGGTTCTTCTATAATGATT 59.385 33.333 4.75 0.00 0.00 2.57
2023 6411 8.131731 GGCAAGTTGGTTCTTCTATAATGATTC 58.868 37.037 4.75 0.00 0.00 2.52
2024 6412 8.677300 GCAAGTTGGTTCTTCTATAATGATTCA 58.323 33.333 4.75 0.00 0.00 2.57
2027 6415 9.265901 AGTTGGTTCTTCTATAATGATTCATCG 57.734 33.333 0.00 0.00 0.00 3.84
2028 6416 8.499162 GTTGGTTCTTCTATAATGATTCATCGG 58.501 37.037 0.00 0.00 0.00 4.18
2029 6417 6.650807 TGGTTCTTCTATAATGATTCATCGGC 59.349 38.462 0.00 0.00 0.00 5.54
2030 6418 6.876257 GGTTCTTCTATAATGATTCATCGGCT 59.124 38.462 0.00 0.00 0.00 5.52
2031 6419 7.064016 GGTTCTTCTATAATGATTCATCGGCTC 59.936 40.741 0.00 0.00 0.00 4.70
2032 6420 7.473735 TCTTCTATAATGATTCATCGGCTCT 57.526 36.000 0.00 0.00 0.00 4.09
2033 6421 7.542890 TCTTCTATAATGATTCATCGGCTCTC 58.457 38.462 0.00 0.00 0.00 3.20
2034 6422 7.395772 TCTTCTATAATGATTCATCGGCTCTCT 59.604 37.037 0.00 0.00 0.00 3.10
2035 6423 6.861144 TCTATAATGATTCATCGGCTCTCTG 58.139 40.000 0.00 0.00 0.00 3.35
2036 6424 2.166821 ATGATTCATCGGCTCTCTGC 57.833 50.000 0.00 0.00 41.94 4.26
2045 6433 3.272031 GCTCTCTGCCCTGTTTGC 58.728 61.111 0.00 0.00 35.15 3.68
2046 6434 2.338785 GCTCTCTGCCCTGTTTGCC 61.339 63.158 0.00 0.00 35.15 4.52
2047 6435 1.377994 CTCTCTGCCCTGTTTGCCT 59.622 57.895 0.00 0.00 0.00 4.75
2048 6436 0.676151 CTCTCTGCCCTGTTTGCCTC 60.676 60.000 0.00 0.00 0.00 4.70
2049 6437 1.130054 TCTCTGCCCTGTTTGCCTCT 61.130 55.000 0.00 0.00 0.00 3.69
2050 6438 0.615331 CTCTGCCCTGTTTGCCTCTA 59.385 55.000 0.00 0.00 0.00 2.43
2051 6439 0.615331 TCTGCCCTGTTTGCCTCTAG 59.385 55.000 0.00 0.00 0.00 2.43
2052 6440 0.615331 CTGCCCTGTTTGCCTCTAGA 59.385 55.000 0.00 0.00 0.00 2.43
2053 6441 1.211457 CTGCCCTGTTTGCCTCTAGAT 59.789 52.381 0.00 0.00 0.00 1.98
2054 6442 1.635487 TGCCCTGTTTGCCTCTAGATT 59.365 47.619 0.00 0.00 0.00 2.40
2055 6443 2.843730 TGCCCTGTTTGCCTCTAGATTA 59.156 45.455 0.00 0.00 0.00 1.75
2056 6444 3.459598 TGCCCTGTTTGCCTCTAGATTAT 59.540 43.478 0.00 0.00 0.00 1.28
2057 6445 4.068599 GCCCTGTTTGCCTCTAGATTATC 58.931 47.826 0.00 0.00 0.00 1.75
2058 6446 4.310769 CCCTGTTTGCCTCTAGATTATCG 58.689 47.826 0.00 0.00 0.00 2.92
2059 6447 4.310769 CCTGTTTGCCTCTAGATTATCGG 58.689 47.826 0.00 0.00 0.00 4.18
2060 6448 4.202264 CCTGTTTGCCTCTAGATTATCGGT 60.202 45.833 0.00 0.00 0.00 4.69
2061 6449 4.945246 TGTTTGCCTCTAGATTATCGGTC 58.055 43.478 0.00 0.00 0.00 4.79
2062 6450 3.917329 TTGCCTCTAGATTATCGGTCG 57.083 47.619 0.00 0.00 0.00 4.79
2063 6451 3.136009 TGCCTCTAGATTATCGGTCGA 57.864 47.619 0.00 0.00 0.00 4.20
2064 6452 3.687125 TGCCTCTAGATTATCGGTCGAT 58.313 45.455 10.75 10.75 38.54 3.59
2065 6453 3.440522 TGCCTCTAGATTATCGGTCGATG 59.559 47.826 15.15 0.00 36.17 3.84
2066 6454 3.181495 GCCTCTAGATTATCGGTCGATGG 60.181 52.174 15.15 6.87 36.17 3.51
2067 6455 4.262617 CCTCTAGATTATCGGTCGATGGA 58.737 47.826 15.15 5.18 36.17 3.41
2068 6456 4.095185 CCTCTAGATTATCGGTCGATGGAC 59.905 50.000 15.15 0.00 42.66 4.02
2069 6457 2.991434 AGATTATCGGTCGATGGACG 57.009 50.000 15.15 0.00 44.39 4.79
2070 6458 1.540267 AGATTATCGGTCGATGGACGG 59.460 52.381 15.15 8.83 44.39 4.79
2071 6459 1.268899 GATTATCGGTCGATGGACGGT 59.731 52.381 15.15 3.65 44.39 4.83
2072 6460 1.105457 TTATCGGTCGATGGACGGTT 58.895 50.000 15.15 9.11 44.39 4.44
2073 6461 1.105457 TATCGGTCGATGGACGGTTT 58.895 50.000 15.15 6.97 44.39 3.27
2074 6462 0.179119 ATCGGTCGATGGACGGTTTC 60.179 55.000 13.69 0.00 44.39 2.78
2075 6463 1.808390 CGGTCGATGGACGGTTTCC 60.808 63.158 7.18 0.00 44.39 3.13
2085 6473 4.531708 CGGTTTCCGCATGTTGTG 57.468 55.556 0.00 0.00 41.17 3.33
2103 6491 3.808036 CCACGATTTGGGCGTAGG 58.192 61.111 0.00 0.00 42.54 3.18
2104 6492 1.817941 CCACGATTTGGGCGTAGGG 60.818 63.158 0.00 0.00 42.54 3.53
2105 6493 1.817941 CACGATTTGGGCGTAGGGG 60.818 63.158 0.00 0.00 40.44 4.79
2106 6494 1.991167 ACGATTTGGGCGTAGGGGA 60.991 57.895 0.00 0.00 40.65 4.81
2107 6495 1.523032 CGATTTGGGCGTAGGGGAC 60.523 63.158 0.00 0.00 0.00 4.46
2108 6496 1.605453 GATTTGGGCGTAGGGGACA 59.395 57.895 0.00 0.00 0.00 4.02
2109 6497 0.182775 GATTTGGGCGTAGGGGACAT 59.817 55.000 0.00 0.00 0.00 3.06
2110 6498 0.182775 ATTTGGGCGTAGGGGACATC 59.817 55.000 0.00 0.00 0.00 3.06
2111 6499 0.912487 TTTGGGCGTAGGGGACATCT 60.912 55.000 0.00 0.00 0.00 2.90
2112 6500 1.622607 TTGGGCGTAGGGGACATCTG 61.623 60.000 0.00 0.00 0.00 2.90
2113 6501 2.808206 GGGCGTAGGGGACATCTGG 61.808 68.421 0.00 0.00 0.00 3.86
2114 6502 1.760875 GGCGTAGGGGACATCTGGA 60.761 63.158 0.00 0.00 0.00 3.86
2115 6503 1.122019 GGCGTAGGGGACATCTGGAT 61.122 60.000 0.00 0.00 0.00 3.41
2116 6504 0.318762 GCGTAGGGGACATCTGGATC 59.681 60.000 0.00 0.00 0.00 3.36
2117 6505 2.002505 CGTAGGGGACATCTGGATCT 57.997 55.000 0.00 0.00 0.00 2.75
2118 6506 1.889829 CGTAGGGGACATCTGGATCTC 59.110 57.143 0.00 0.00 0.00 2.75
2119 6507 2.252714 GTAGGGGACATCTGGATCTCC 58.747 57.143 0.00 0.00 35.48 3.71
2120 6508 0.104725 AGGGGACATCTGGATCTCCC 60.105 60.000 13.36 13.36 43.08 4.30
2121 6509 2.457759 GGGACATCTGGATCTCCCC 58.542 63.158 11.38 4.76 39.36 4.81
2122 6510 0.104725 GGGACATCTGGATCTCCCCT 60.105 60.000 11.38 0.00 39.36 4.79
2123 6511 1.697291 GGGACATCTGGATCTCCCCTT 60.697 57.143 11.38 0.00 39.36 3.95
2124 6512 1.696884 GGACATCTGGATCTCCCCTTC 59.303 57.143 0.00 0.00 34.29 3.46
2125 6513 1.342819 GACATCTGGATCTCCCCTTCG 59.657 57.143 0.00 0.00 34.29 3.79
2126 6514 1.062886 ACATCTGGATCTCCCCTTCGA 60.063 52.381 0.00 0.00 34.29 3.71
2127 6515 1.342819 CATCTGGATCTCCCCTTCGAC 59.657 57.143 0.00 0.00 34.29 4.20
2128 6516 0.335019 TCTGGATCTCCCCTTCGACA 59.665 55.000 0.00 0.00 34.29 4.35
2129 6517 1.062886 TCTGGATCTCCCCTTCGACAT 60.063 52.381 0.00 0.00 34.29 3.06
2130 6518 1.765314 CTGGATCTCCCCTTCGACATT 59.235 52.381 0.00 0.00 34.29 2.71
2131 6519 1.486310 TGGATCTCCCCTTCGACATTG 59.514 52.381 0.00 0.00 34.29 2.82
2132 6520 1.202698 GGATCTCCCCTTCGACATTGG 60.203 57.143 0.00 0.00 0.00 3.16
2133 6521 0.181350 ATCTCCCCTTCGACATTGGC 59.819 55.000 0.00 0.00 0.00 4.52
2134 6522 1.452108 CTCCCCTTCGACATTGGCC 60.452 63.158 0.00 0.00 0.00 5.36
2135 6523 2.440247 CCCCTTCGACATTGGCCC 60.440 66.667 0.00 0.00 0.00 5.80
2136 6524 2.824041 CCCTTCGACATTGGCCCG 60.824 66.667 0.00 0.00 0.00 6.13
2137 6525 2.267642 CCTTCGACATTGGCCCGA 59.732 61.111 0.00 0.00 0.00 5.14
2138 6526 1.815421 CCTTCGACATTGGCCCGAG 60.815 63.158 0.00 0.00 33.66 4.63
2139 6527 1.079127 CTTCGACATTGGCCCGAGT 60.079 57.895 0.00 0.00 33.66 4.18
2140 6528 1.079405 TTCGACATTGGCCCGAGTC 60.079 57.895 0.00 4.23 33.66 3.36
2141 6529 2.885644 CGACATTGGCCCGAGTCG 60.886 66.667 21.20 21.20 46.12 4.18
2142 6530 2.577059 GACATTGGCCCGAGTCGA 59.423 61.111 15.64 0.00 0.00 4.20
2143 6531 1.144057 GACATTGGCCCGAGTCGAT 59.856 57.895 15.64 0.00 0.00 3.59
2144 6532 1.153369 ACATTGGCCCGAGTCGATG 60.153 57.895 15.64 11.66 44.00 3.84
2145 6533 1.889105 CATTGGCCCGAGTCGATGG 60.889 63.158 15.64 8.90 36.05 3.51
2150 6538 2.029666 CCCGAGTCGATGGGCATC 59.970 66.667 15.64 0.00 38.90 3.91
2151 6539 2.502492 CCCGAGTCGATGGGCATCT 61.502 63.158 15.64 0.00 38.90 2.90
2152 6540 1.300465 CCGAGTCGATGGGCATCTG 60.300 63.158 15.64 0.00 35.72 2.90
2153 6541 1.735973 CGAGTCGATGGGCATCTGA 59.264 57.895 6.73 0.00 35.72 3.27
2154 6542 0.103026 CGAGTCGATGGGCATCTGAA 59.897 55.000 6.73 0.00 35.72 3.02
2155 6543 1.269988 CGAGTCGATGGGCATCTGAAT 60.270 52.381 6.73 0.00 35.72 2.57
2156 6544 2.411904 GAGTCGATGGGCATCTGAATC 58.588 52.381 0.00 0.00 35.72 2.52
2157 6545 1.143305 GTCGATGGGCATCTGAATCG 58.857 55.000 3.02 3.02 42.45 3.34
2158 6546 1.039856 TCGATGGGCATCTGAATCGA 58.960 50.000 7.16 7.16 46.18 3.59
2159 6547 1.143305 CGATGGGCATCTGAATCGAC 58.857 55.000 3.27 0.00 43.48 4.20
2160 6548 1.143305 GATGGGCATCTGAATCGACG 58.857 55.000 0.00 0.00 35.04 5.12
2161 6549 0.465705 ATGGGCATCTGAATCGACGT 59.534 50.000 0.00 0.00 0.00 4.34
2162 6550 0.249120 TGGGCATCTGAATCGACGTT 59.751 50.000 0.00 0.00 0.00 3.99
2163 6551 1.338674 TGGGCATCTGAATCGACGTTT 60.339 47.619 0.00 0.00 0.00 3.60
2164 6552 1.737793 GGGCATCTGAATCGACGTTTT 59.262 47.619 0.00 0.00 0.00 2.43
2165 6553 2.223044 GGGCATCTGAATCGACGTTTTC 60.223 50.000 0.00 0.67 0.00 2.29
2166 6554 2.673368 GGCATCTGAATCGACGTTTTCT 59.327 45.455 12.23 0.00 0.00 2.52
2167 6555 3.242123 GGCATCTGAATCGACGTTTTCTC 60.242 47.826 12.23 0.00 0.00 2.87
2168 6556 3.242123 GCATCTGAATCGACGTTTTCTCC 60.242 47.826 12.23 0.00 0.00 3.71
2169 6557 3.653539 TCTGAATCGACGTTTTCTCCA 57.346 42.857 12.23 0.00 0.00 3.86
2170 6558 4.188247 TCTGAATCGACGTTTTCTCCAT 57.812 40.909 12.23 0.00 0.00 3.41
2171 6559 3.926527 TCTGAATCGACGTTTTCTCCATG 59.073 43.478 12.23 0.00 0.00 3.66
2172 6560 2.415168 TGAATCGACGTTTTCTCCATGC 59.585 45.455 12.23 0.00 0.00 4.06
2173 6561 0.999406 ATCGACGTTTTCTCCATGCG 59.001 50.000 0.00 0.00 0.00 4.73
2174 6562 1.011968 TCGACGTTTTCTCCATGCGG 61.012 55.000 0.00 0.00 0.00 5.69
2175 6563 1.289109 CGACGTTTTCTCCATGCGGT 61.289 55.000 0.00 0.00 0.00 5.68
2176 6564 0.442699 GACGTTTTCTCCATGCGGTC 59.557 55.000 0.00 0.00 0.00 4.79
2177 6565 0.953960 ACGTTTTCTCCATGCGGTCC 60.954 55.000 0.00 0.00 0.00 4.46
2178 6566 0.953471 CGTTTTCTCCATGCGGTCCA 60.953 55.000 0.00 0.00 0.00 4.02
2179 6567 0.804989 GTTTTCTCCATGCGGTCCAG 59.195 55.000 0.00 0.00 0.00 3.86
2180 6568 0.690192 TTTTCTCCATGCGGTCCAGA 59.310 50.000 0.00 0.00 0.00 3.86
2181 6569 0.911769 TTTCTCCATGCGGTCCAGAT 59.088 50.000 0.00 0.00 0.00 2.90
2182 6570 0.465705 TTCTCCATGCGGTCCAGATC 59.534 55.000 0.00 0.00 0.00 2.75
2183 6571 1.070445 CTCCATGCGGTCCAGATCC 59.930 63.158 0.00 0.00 0.00 3.36
2184 6572 1.383109 TCCATGCGGTCCAGATCCT 60.383 57.895 0.00 0.00 0.00 3.24
2185 6573 1.070445 CCATGCGGTCCAGATCCTC 59.930 63.158 0.00 0.00 0.00 3.71
2186 6574 1.406065 CCATGCGGTCCAGATCCTCT 61.406 60.000 0.00 0.00 0.00 3.69
2187 6575 0.033228 CATGCGGTCCAGATCCTCTC 59.967 60.000 0.00 0.00 0.00 3.20
2188 6576 1.459455 ATGCGGTCCAGATCCTCTCG 61.459 60.000 0.00 0.00 0.00 4.04
2189 6577 2.122167 GCGGTCCAGATCCTCTCGT 61.122 63.158 0.00 0.00 0.00 4.18
2190 6578 2.026522 CGGTCCAGATCCTCTCGTC 58.973 63.158 0.00 0.00 0.00 4.20
2191 6579 0.464735 CGGTCCAGATCCTCTCGTCT 60.465 60.000 0.00 0.00 0.00 4.18
2192 6580 1.202663 CGGTCCAGATCCTCTCGTCTA 60.203 57.143 0.00 0.00 0.00 2.59
2193 6581 2.500229 GGTCCAGATCCTCTCGTCTAG 58.500 57.143 0.00 0.00 0.00 2.43
2194 6582 1.877443 GTCCAGATCCTCTCGTCTAGC 59.123 57.143 0.00 0.00 0.00 3.42
2195 6583 1.771854 TCCAGATCCTCTCGTCTAGCT 59.228 52.381 0.00 0.00 0.00 3.32
2196 6584 2.173782 TCCAGATCCTCTCGTCTAGCTT 59.826 50.000 0.00 0.00 0.00 3.74
2197 6585 2.293122 CCAGATCCTCTCGTCTAGCTTG 59.707 54.545 0.00 0.00 0.00 4.01
2198 6586 2.293122 CAGATCCTCTCGTCTAGCTTGG 59.707 54.545 0.00 0.00 0.00 3.61
2199 6587 2.092103 AGATCCTCTCGTCTAGCTTGGT 60.092 50.000 0.00 0.00 0.00 3.67
2200 6588 2.217510 TCCTCTCGTCTAGCTTGGTT 57.782 50.000 0.00 0.00 0.00 3.67
2201 6589 1.819288 TCCTCTCGTCTAGCTTGGTTG 59.181 52.381 0.00 0.00 0.00 3.77
2202 6590 1.546476 CCTCTCGTCTAGCTTGGTTGT 59.454 52.381 0.00 0.00 0.00 3.32
2203 6591 2.028930 CCTCTCGTCTAGCTTGGTTGTT 60.029 50.000 0.00 0.00 0.00 2.83
2204 6592 3.555168 CCTCTCGTCTAGCTTGGTTGTTT 60.555 47.826 0.00 0.00 0.00 2.83
2205 6593 4.058817 CTCTCGTCTAGCTTGGTTGTTTT 58.941 43.478 0.00 0.00 0.00 2.43
2206 6594 4.448210 TCTCGTCTAGCTTGGTTGTTTTT 58.552 39.130 0.00 0.00 0.00 1.94
2207 6595 4.510340 TCTCGTCTAGCTTGGTTGTTTTTC 59.490 41.667 0.00 0.00 0.00 2.29
2208 6596 4.448210 TCGTCTAGCTTGGTTGTTTTTCT 58.552 39.130 0.00 0.00 0.00 2.52
2209 6597 5.603596 TCGTCTAGCTTGGTTGTTTTTCTA 58.396 37.500 0.00 0.00 0.00 2.10
2210 6598 5.464389 TCGTCTAGCTTGGTTGTTTTTCTAC 59.536 40.000 0.00 0.00 0.00 2.59
2211 6599 5.333875 CGTCTAGCTTGGTTGTTTTTCTACC 60.334 44.000 0.00 0.00 41.19 3.18
2212 6600 3.982576 AGCTTGGTTGTTTTTCTACCG 57.017 42.857 0.00 0.00 43.14 4.02
2213 6601 2.621526 AGCTTGGTTGTTTTTCTACCGG 59.378 45.455 0.00 0.00 43.14 5.28
2214 6602 2.619646 GCTTGGTTGTTTTTCTACCGGA 59.380 45.455 9.46 0.00 43.14 5.14
2215 6603 3.254903 GCTTGGTTGTTTTTCTACCGGAT 59.745 43.478 9.46 0.00 43.14 4.18
2216 6604 4.794169 CTTGGTTGTTTTTCTACCGGATG 58.206 43.478 9.46 0.00 43.14 3.51
2217 6605 3.822940 TGGTTGTTTTTCTACCGGATGT 58.177 40.909 9.46 0.00 43.14 3.06
2218 6606 4.208746 TGGTTGTTTTTCTACCGGATGTT 58.791 39.130 9.46 0.00 43.14 2.71
2219 6607 4.036971 TGGTTGTTTTTCTACCGGATGTTG 59.963 41.667 9.46 0.00 43.14 3.33
2220 6608 4.037089 GGTTGTTTTTCTACCGGATGTTGT 59.963 41.667 9.46 0.00 32.94 3.32
2221 6609 5.450826 GGTTGTTTTTCTACCGGATGTTGTT 60.451 40.000 9.46 0.00 32.94 2.83
2222 6610 5.176407 TGTTTTTCTACCGGATGTTGTTG 57.824 39.130 9.46 0.00 0.00 3.33
2223 6611 3.907894 TTTTCTACCGGATGTTGTTGC 57.092 42.857 9.46 0.00 0.00 4.17
2224 6612 2.851263 TTCTACCGGATGTTGTTGCT 57.149 45.000 9.46 0.00 0.00 3.91
2225 6613 2.380084 TCTACCGGATGTTGTTGCTC 57.620 50.000 9.46 0.00 0.00 4.26
2226 6614 1.899814 TCTACCGGATGTTGTTGCTCT 59.100 47.619 9.46 0.00 0.00 4.09
2227 6615 2.002586 CTACCGGATGTTGTTGCTCTG 58.997 52.381 9.46 0.00 0.00 3.35
2228 6616 0.108585 ACCGGATGTTGTTGCTCTGT 59.891 50.000 9.46 0.00 0.00 3.41
2229 6617 1.238439 CCGGATGTTGTTGCTCTGTT 58.762 50.000 0.00 0.00 0.00 3.16
2230 6618 1.069022 CCGGATGTTGTTGCTCTGTTG 60.069 52.381 0.00 0.00 0.00 3.33
2231 6619 1.603802 CGGATGTTGTTGCTCTGTTGT 59.396 47.619 0.00 0.00 0.00 3.32
2232 6620 2.033299 CGGATGTTGTTGCTCTGTTGTT 59.967 45.455 0.00 0.00 0.00 2.83
2233 6621 3.489059 CGGATGTTGTTGCTCTGTTGTTT 60.489 43.478 0.00 0.00 0.00 2.83
2234 6622 3.798337 GGATGTTGTTGCTCTGTTGTTTG 59.202 43.478 0.00 0.00 0.00 2.93
2235 6623 4.439974 GGATGTTGTTGCTCTGTTGTTTGA 60.440 41.667 0.00 0.00 0.00 2.69
2236 6624 4.095410 TGTTGTTGCTCTGTTGTTTGAG 57.905 40.909 0.00 0.00 0.00 3.02
2237 6625 3.505680 TGTTGTTGCTCTGTTGTTTGAGT 59.494 39.130 0.00 0.00 33.22 3.41
2238 6626 4.022416 TGTTGTTGCTCTGTTGTTTGAGTT 60.022 37.500 0.00 0.00 33.22 3.01
2239 6627 4.782019 TGTTGCTCTGTTGTTTGAGTTT 57.218 36.364 0.00 0.00 33.22 2.66
2240 6628 4.484236 TGTTGCTCTGTTGTTTGAGTTTG 58.516 39.130 0.00 0.00 33.22 2.93
2241 6629 3.149436 TGCTCTGTTGTTTGAGTTTGC 57.851 42.857 0.00 0.00 33.22 3.68
2242 6630 2.491298 TGCTCTGTTGTTTGAGTTTGCA 59.509 40.909 0.00 0.00 33.22 4.08
2243 6631 3.130869 TGCTCTGTTGTTTGAGTTTGCAT 59.869 39.130 0.00 0.00 33.22 3.96
2244 6632 3.732721 GCTCTGTTGTTTGAGTTTGCATC 59.267 43.478 0.00 0.00 33.22 3.91
2245 6633 4.734402 GCTCTGTTGTTTGAGTTTGCATCA 60.734 41.667 0.00 0.00 33.22 3.07
2246 6634 4.923893 TCTGTTGTTTGAGTTTGCATCAG 58.076 39.130 0.00 0.00 32.81 2.90
2247 6635 4.044336 TGTTGTTTGAGTTTGCATCAGG 57.956 40.909 0.00 0.00 0.00 3.86
2248 6636 2.796593 GTTGTTTGAGTTTGCATCAGGC 59.203 45.455 0.00 0.00 45.13 4.85
2249 6637 1.340889 TGTTTGAGTTTGCATCAGGCC 59.659 47.619 0.00 0.00 43.89 5.19
2250 6638 0.968405 TTTGAGTTTGCATCAGGCCC 59.032 50.000 0.00 0.00 43.89 5.80
2251 6639 0.112995 TTGAGTTTGCATCAGGCCCT 59.887 50.000 0.00 0.00 43.89 5.19
2252 6640 0.322816 TGAGTTTGCATCAGGCCCTC 60.323 55.000 0.00 0.00 43.89 4.30
2253 6641 1.000396 AGTTTGCATCAGGCCCTCC 60.000 57.895 0.00 0.00 43.89 4.30
2254 6642 1.304381 GTTTGCATCAGGCCCTCCA 60.304 57.895 0.00 0.00 43.89 3.86
2255 6643 1.000521 TTTGCATCAGGCCCTCCAG 60.001 57.895 0.00 0.00 43.89 3.86
2256 6644 3.650298 TTGCATCAGGCCCTCCAGC 62.650 63.158 0.00 0.00 43.89 4.85
2258 6646 4.559063 CATCAGGCCCTCCAGCGG 62.559 72.222 0.00 0.00 33.74 5.52
2261 6649 4.351054 CAGGCCCTCCAGCGGTTT 62.351 66.667 0.00 0.00 33.74 3.27
2262 6650 4.351054 AGGCCCTCCAGCGGTTTG 62.351 66.667 0.00 0.00 33.74 2.93
2263 6651 4.344865 GGCCCTCCAGCGGTTTGA 62.345 66.667 0.00 0.00 0.00 2.69
2264 6652 2.044946 GCCCTCCAGCGGTTTGAT 60.045 61.111 0.00 0.00 0.00 2.57
2265 6653 1.678970 GCCCTCCAGCGGTTTGATT 60.679 57.895 0.00 0.00 0.00 2.57
2266 6654 1.657751 GCCCTCCAGCGGTTTGATTC 61.658 60.000 0.00 0.00 0.00 2.52
2267 6655 0.322456 CCCTCCAGCGGTTTGATTCA 60.322 55.000 0.00 0.00 0.00 2.57
2268 6656 1.089920 CCTCCAGCGGTTTGATTCAG 58.910 55.000 0.00 0.00 0.00 3.02
2269 6657 1.089920 CTCCAGCGGTTTGATTCAGG 58.910 55.000 0.00 0.00 0.00 3.86
2270 6658 0.400213 TCCAGCGGTTTGATTCAGGT 59.600 50.000 0.00 0.00 0.00 4.00
2271 6659 1.202879 TCCAGCGGTTTGATTCAGGTT 60.203 47.619 0.00 0.00 0.00 3.50
2272 6660 1.613437 CCAGCGGTTTGATTCAGGTTT 59.387 47.619 0.00 0.00 0.00 3.27
2273 6661 2.351738 CCAGCGGTTTGATTCAGGTTTC 60.352 50.000 0.00 0.00 0.00 2.78
2274 6662 1.535462 AGCGGTTTGATTCAGGTTTCG 59.465 47.619 0.00 0.00 0.00 3.46
2275 6663 1.265905 GCGGTTTGATTCAGGTTTCGT 59.734 47.619 0.00 0.00 0.00 3.85
2276 6664 2.287368 GCGGTTTGATTCAGGTTTCGTT 60.287 45.455 0.00 0.00 0.00 3.85
2277 6665 3.296628 CGGTTTGATTCAGGTTTCGTTG 58.703 45.455 0.00 0.00 0.00 4.10
2278 6666 3.242936 CGGTTTGATTCAGGTTTCGTTGT 60.243 43.478 0.00 0.00 0.00 3.32
2279 6667 4.041723 GGTTTGATTCAGGTTTCGTTGTG 58.958 43.478 0.00 0.00 0.00 3.33
2280 6668 3.980646 TTGATTCAGGTTTCGTTGTGG 57.019 42.857 0.00 0.00 0.00 4.17
2281 6669 2.925724 TGATTCAGGTTTCGTTGTGGT 58.074 42.857 0.00 0.00 0.00 4.16
2282 6670 2.616376 TGATTCAGGTTTCGTTGTGGTG 59.384 45.455 0.00 0.00 0.00 4.17
2283 6671 1.384525 TTCAGGTTTCGTTGTGGTGG 58.615 50.000 0.00 0.00 0.00 4.61
2284 6672 0.253610 TCAGGTTTCGTTGTGGTGGT 59.746 50.000 0.00 0.00 0.00 4.16
2285 6673 0.661020 CAGGTTTCGTTGTGGTGGTC 59.339 55.000 0.00 0.00 0.00 4.02
2286 6674 0.464916 AGGTTTCGTTGTGGTGGTCC 60.465 55.000 0.00 0.00 0.00 4.46
2287 6675 1.449726 GGTTTCGTTGTGGTGGTCCC 61.450 60.000 0.00 0.00 0.00 4.46
2288 6676 0.464916 GTTTCGTTGTGGTGGTCCCT 60.465 55.000 0.00 0.00 0.00 4.20
2289 6677 0.256464 TTTCGTTGTGGTGGTCCCTT 59.744 50.000 0.00 0.00 0.00 3.95
2290 6678 0.179040 TTCGTTGTGGTGGTCCCTTC 60.179 55.000 0.00 0.00 0.00 3.46
2291 6679 1.052124 TCGTTGTGGTGGTCCCTTCT 61.052 55.000 0.00 0.00 0.00 2.85
2292 6680 0.682852 CGTTGTGGTGGTCCCTTCTA 59.317 55.000 0.00 0.00 0.00 2.10
2293 6681 1.071071 CGTTGTGGTGGTCCCTTCTAA 59.929 52.381 0.00 0.00 0.00 2.10
2294 6682 2.290071 CGTTGTGGTGGTCCCTTCTAAT 60.290 50.000 0.00 0.00 0.00 1.73
2295 6683 3.763057 GTTGTGGTGGTCCCTTCTAATT 58.237 45.455 0.00 0.00 0.00 1.40
2296 6684 3.433306 TGTGGTGGTCCCTTCTAATTG 57.567 47.619 0.00 0.00 0.00 2.32
2297 6685 2.714250 TGTGGTGGTCCCTTCTAATTGT 59.286 45.455 0.00 0.00 0.00 2.71
2298 6686 3.139397 TGTGGTGGTCCCTTCTAATTGTT 59.861 43.478 0.00 0.00 0.00 2.83
2299 6687 3.506067 GTGGTGGTCCCTTCTAATTGTTG 59.494 47.826 0.00 0.00 0.00 3.33
2300 6688 2.492088 GGTGGTCCCTTCTAATTGTTGC 59.508 50.000 0.00 0.00 0.00 4.17
2301 6689 3.421844 GTGGTCCCTTCTAATTGTTGCT 58.578 45.455 0.00 0.00 0.00 3.91
2302 6690 3.826729 GTGGTCCCTTCTAATTGTTGCTT 59.173 43.478 0.00 0.00 0.00 3.91
2303 6691 4.280929 GTGGTCCCTTCTAATTGTTGCTTT 59.719 41.667 0.00 0.00 0.00 3.51
2304 6692 4.280677 TGGTCCCTTCTAATTGTTGCTTTG 59.719 41.667 0.00 0.00 0.00 2.77
2305 6693 4.237724 GTCCCTTCTAATTGTTGCTTTGC 58.762 43.478 0.00 0.00 0.00 3.68
2306 6694 4.021981 GTCCCTTCTAATTGTTGCTTTGCT 60.022 41.667 0.00 0.00 0.00 3.91
2307 6695 4.588528 TCCCTTCTAATTGTTGCTTTGCTT 59.411 37.500 0.00 0.00 0.00 3.91
2308 6696 5.070313 TCCCTTCTAATTGTTGCTTTGCTTT 59.930 36.000 0.00 0.00 0.00 3.51
2309 6697 5.178067 CCCTTCTAATTGTTGCTTTGCTTTG 59.822 40.000 0.00 0.00 0.00 2.77
2310 6698 5.754890 CCTTCTAATTGTTGCTTTGCTTTGT 59.245 36.000 0.00 0.00 0.00 2.83
2311 6699 6.922957 CCTTCTAATTGTTGCTTTGCTTTGTA 59.077 34.615 0.00 0.00 0.00 2.41
2312 6700 7.115378 CCTTCTAATTGTTGCTTTGCTTTGTAG 59.885 37.037 0.00 0.00 0.00 2.74
2313 6701 7.038154 TCTAATTGTTGCTTTGCTTTGTAGT 57.962 32.000 0.00 0.00 0.00 2.73
2314 6702 7.488322 TCTAATTGTTGCTTTGCTTTGTAGTT 58.512 30.769 0.00 0.00 0.00 2.24
2315 6703 6.588348 AATTGTTGCTTTGCTTTGTAGTTC 57.412 33.333 0.00 0.00 0.00 3.01
2316 6704 4.981806 TGTTGCTTTGCTTTGTAGTTCT 57.018 36.364 0.00 0.00 0.00 3.01
2317 6705 5.323371 TGTTGCTTTGCTTTGTAGTTCTT 57.677 34.783 0.00 0.00 0.00 2.52
2318 6706 5.339990 TGTTGCTTTGCTTTGTAGTTCTTC 58.660 37.500 0.00 0.00 0.00 2.87
2319 6707 5.105957 TGTTGCTTTGCTTTGTAGTTCTTCA 60.106 36.000 0.00 0.00 0.00 3.02
2320 6708 5.772825 TGCTTTGCTTTGTAGTTCTTCAT 57.227 34.783 0.00 0.00 0.00 2.57
2321 6709 5.762045 TGCTTTGCTTTGTAGTTCTTCATC 58.238 37.500 0.00 0.00 0.00 2.92
2322 6710 4.848299 GCTTTGCTTTGTAGTTCTTCATCG 59.152 41.667 0.00 0.00 0.00 3.84
2323 6711 5.560953 GCTTTGCTTTGTAGTTCTTCATCGT 60.561 40.000 0.00 0.00 0.00 3.73
2324 6712 4.990543 TGCTTTGTAGTTCTTCATCGTG 57.009 40.909 0.00 0.00 0.00 4.35
2325 6713 4.627058 TGCTTTGTAGTTCTTCATCGTGA 58.373 39.130 0.00 0.00 0.00 4.35
2326 6714 4.686091 TGCTTTGTAGTTCTTCATCGTGAG 59.314 41.667 0.00 0.00 0.00 3.51
2327 6715 4.434857 GCTTTGTAGTTCTTCATCGTGAGC 60.435 45.833 0.00 0.00 0.00 4.26
2328 6716 2.863739 TGTAGTTCTTCATCGTGAGCG 58.136 47.619 0.00 0.00 39.92 5.03
2344 6732 3.929389 CGAGCTTCGCCTGCTATC 58.071 61.111 0.00 0.00 41.30 2.08
2345 6733 1.361993 CGAGCTTCGCCTGCTATCT 59.638 57.895 0.00 0.00 41.30 1.98
2346 6734 0.249238 CGAGCTTCGCCTGCTATCTT 60.249 55.000 0.00 0.00 41.30 2.40
2347 6735 1.804372 CGAGCTTCGCCTGCTATCTTT 60.804 52.381 0.00 0.00 41.30 2.52
2348 6736 1.864082 GAGCTTCGCCTGCTATCTTTC 59.136 52.381 0.00 0.00 41.30 2.62
2349 6737 1.208052 AGCTTCGCCTGCTATCTTTCA 59.792 47.619 0.00 0.00 39.21 2.69
2350 6738 2.158842 AGCTTCGCCTGCTATCTTTCAT 60.159 45.455 0.00 0.00 39.21 2.57
2351 6739 2.615912 GCTTCGCCTGCTATCTTTCATT 59.384 45.455 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 6.366061 CAGTTTAAAAAGTTGAGCCCTATTGC 59.634 38.462 0.00 0.00 0.00 3.56
181 2242 3.482786 GAACATGCTAAAACTGCTCGTG 58.517 45.455 0.00 0.00 0.00 4.35
200 2261 4.435137 TGGAAAGAGGATGTAAGAGGGAA 58.565 43.478 0.00 0.00 0.00 3.97
223 2284 8.470657 TCTACTACGTACTCTTACCTCTCATA 57.529 38.462 0.00 0.00 0.00 2.15
304 2365 8.720537 CCCTCTTACCCCTTCTTTTTACATATA 58.279 37.037 0.00 0.00 0.00 0.86
318 2379 0.044855 ACATGCTCCCTCTTACCCCT 59.955 55.000 0.00 0.00 0.00 4.79
319 2380 0.919710 AACATGCTCCCTCTTACCCC 59.080 55.000 0.00 0.00 0.00 4.95
461 2522 3.877508 GGCTACCCAATTTACTACTGCTG 59.122 47.826 0.00 0.00 0.00 4.41
601 2662 4.091939 GTACACCGGACCCAGCCC 62.092 72.222 9.46 0.00 0.00 5.19
632 2693 7.096023 GCTAACATGTTAATCGATCGACAGATT 60.096 37.037 22.06 13.32 39.95 2.40
635 2696 5.458779 TGCTAACATGTTAATCGATCGACAG 59.541 40.000 22.06 10.45 0.00 3.51
648 2709 5.765510 TCCCTAATGGATTGCTAACATGTT 58.234 37.500 16.68 16.68 38.61 2.71
649 2710 5.387113 TCCCTAATGGATTGCTAACATGT 57.613 39.130 0.00 0.00 38.61 3.21
708 5018 3.241067 TCCTTTACACATGCCGTAGTC 57.759 47.619 0.00 0.00 0.00 2.59
714 5024 3.568007 TGAGTGTTTCCTTTACACATGCC 59.432 43.478 8.61 0.00 46.42 4.40
793 5103 1.944032 ACGTGTTGGTTGACAGGTAC 58.056 50.000 1.97 0.00 44.19 3.34
831 5141 0.256177 GGAGGCAAGGGACCCTAAAG 59.744 60.000 15.29 8.36 31.13 1.85
832 5142 0.476808 TGGAGGCAAGGGACCCTAAA 60.477 55.000 15.29 0.00 31.13 1.85
900 5210 2.037251 GGAGCTCACTGTGACTTGGTAA 59.963 50.000 17.19 0.00 0.00 2.85
901 5211 1.618837 GGAGCTCACTGTGACTTGGTA 59.381 52.381 17.19 0.00 0.00 3.25
902 5212 0.394565 GGAGCTCACTGTGACTTGGT 59.605 55.000 17.19 3.08 0.00 3.67
903 5213 0.394192 TGGAGCTCACTGTGACTTGG 59.606 55.000 17.19 0.00 0.00 3.61
904 5214 2.141517 CTTGGAGCTCACTGTGACTTG 58.858 52.381 17.19 0.00 0.00 3.16
905 5215 1.542108 GCTTGGAGCTCACTGTGACTT 60.542 52.381 17.19 0.00 38.45 3.01
906 5216 0.034616 GCTTGGAGCTCACTGTGACT 59.965 55.000 17.19 9.25 38.45 3.41
907 5217 0.250038 TGCTTGGAGCTCACTGTGAC 60.250 55.000 17.19 4.48 42.97 3.67
908 5218 0.689055 ATGCTTGGAGCTCACTGTGA 59.311 50.000 17.19 10.50 42.97 3.58
912 5222 0.252479 CTGGATGCTTGGAGCTCACT 59.748 55.000 17.19 0.00 42.97 3.41
980 5291 6.986817 CGCCATCTCTCCTTTTCTAATTTCTA 59.013 38.462 0.00 0.00 0.00 2.10
981 5292 5.819901 CGCCATCTCTCCTTTTCTAATTTCT 59.180 40.000 0.00 0.00 0.00 2.52
982 5293 5.817816 TCGCCATCTCTCCTTTTCTAATTTC 59.182 40.000 0.00 0.00 0.00 2.17
983 5294 5.586643 GTCGCCATCTCTCCTTTTCTAATTT 59.413 40.000 0.00 0.00 0.00 1.82
984 5295 5.119694 GTCGCCATCTCTCCTTTTCTAATT 58.880 41.667 0.00 0.00 0.00 1.40
985 5296 4.698575 GTCGCCATCTCTCCTTTTCTAAT 58.301 43.478 0.00 0.00 0.00 1.73
986 5297 3.428999 CGTCGCCATCTCTCCTTTTCTAA 60.429 47.826 0.00 0.00 0.00 2.10
1234 5545 1.609555 GACCGGAGAGTAGGCACATAG 59.390 57.143 9.46 0.00 0.00 2.23
1304 5616 0.744874 CCCATGATTGGCAGCTTCTG 59.255 55.000 0.00 0.00 42.15 3.02
1316 5628 0.612732 CCAACACAGCACCCCATGAT 60.613 55.000 0.00 0.00 0.00 2.45
1326 5638 1.000274 GGAATCCAACACCAACACAGC 60.000 52.381 0.00 0.00 0.00 4.40
1378 5730 6.042093 TCCATTTCTCACTTAGTTCTGTGTCT 59.958 38.462 0.00 0.00 35.82 3.41
1379 5731 6.223852 TCCATTTCTCACTTAGTTCTGTGTC 58.776 40.000 0.00 0.00 35.82 3.67
1402 5779 9.982291 ACACACGATTTACACATACATAATTTC 57.018 29.630 0.00 0.00 0.00 2.17
1419 5802 7.910162 GCATGTCATCTTTATAAACACACGATT 59.090 33.333 0.00 0.00 0.00 3.34
1422 5805 6.541969 TGCATGTCATCTTTATAAACACACG 58.458 36.000 0.00 0.00 0.00 4.49
1496 5880 1.153997 GTTCTCCGACCTCGAGTGC 60.154 63.158 12.31 1.51 43.02 4.40
1512 5896 4.164413 GGGCTCCTAAGAAATAGACTGGTT 59.836 45.833 0.00 0.00 33.04 3.67
1514 5898 3.071747 GGGGCTCCTAAGAAATAGACTGG 59.928 52.174 0.00 0.00 33.04 4.00
1533 5917 1.376037 GCTCAACTCTTCACGGGGG 60.376 63.158 0.00 0.00 0.00 5.40
1537 5921 1.347817 GGAGCGCTCAACTCTTCACG 61.348 60.000 36.27 0.00 34.46 4.35
1547 5931 2.079158 CATTGAAGAAAGGAGCGCTCA 58.921 47.619 36.27 14.97 0.00 4.26
1569 5953 1.586826 CGTGACGTGACACCGAACA 60.587 57.895 5.87 0.38 37.48 3.18
1587 5971 0.685660 AGGGAAGAAGGGTTGTCGAC 59.314 55.000 9.11 9.11 0.00 4.20
1606 5990 2.929641 TGAACATCAGACACAGGCAAA 58.070 42.857 0.00 0.00 0.00 3.68
1608 5992 2.636647 TTGAACATCAGACACAGGCA 57.363 45.000 0.00 0.00 0.00 4.75
1612 5996 5.362143 TCCCAAATTTTGAACATCAGACACA 59.638 36.000 10.72 0.00 0.00 3.72
1616 6000 7.065120 ACAATCCCAAATTTTGAACATCAGA 57.935 32.000 10.72 0.00 0.00 3.27
1642 6026 4.093408 CAGACATGTCAATAGACCAAACGG 59.907 45.833 27.02 0.00 44.33 4.44
1669 6053 0.744414 CGCCAATTGGATCGACAGGT 60.744 55.000 29.02 0.00 37.39 4.00
1672 6056 1.083489 GTTCGCCAATTGGATCGACA 58.917 50.000 29.02 14.66 37.39 4.35
1675 6059 2.476772 TGGTTCGCCAATTGGATCG 58.523 52.632 29.02 21.68 45.88 3.69
1699 6083 3.942748 TCATAAGCTCGGGCGTTATTTTT 59.057 39.130 0.00 0.00 44.37 1.94
1705 6089 1.084289 GTTTCATAAGCTCGGGCGTT 58.916 50.000 0.00 0.00 44.37 4.84
1717 6101 1.203052 GTCTGGGGACGACGTTTCATA 59.797 52.381 0.13 0.00 32.47 2.15
1719 6103 1.111116 AGTCTGGGGACGACGTTTCA 61.111 55.000 0.13 0.33 46.29 2.69
1725 6109 1.682323 GGATTAGAGTCTGGGGACGAC 59.318 57.143 1.86 0.00 46.29 4.34
1731 6115 1.428869 CAGGGGGATTAGAGTCTGGG 58.571 60.000 1.86 0.00 0.00 4.45
1733 6117 0.761802 GCCAGGGGGATTAGAGTCTG 59.238 60.000 1.86 0.00 35.59 3.51
1737 6121 1.347062 GAGAGCCAGGGGGATTAGAG 58.653 60.000 0.00 0.00 35.59 2.43
1766 6153 0.108138 ACTCTTGTATCGCCTGTGGC 60.108 55.000 0.00 0.00 46.75 5.01
1767 6154 1.204704 TCACTCTTGTATCGCCTGTGG 59.795 52.381 0.00 0.00 0.00 4.17
1772 6159 1.476891 TCAGGTCACTCTTGTATCGCC 59.523 52.381 0.00 0.00 0.00 5.54
1777 6164 1.132977 TGGGGTCAGGTCACTCTTGTA 60.133 52.381 0.00 0.00 0.00 2.41
1785 6173 2.875823 TAGGGCTGGGGTCAGGTCA 61.876 63.158 0.00 0.00 41.19 4.02
1793 6181 3.782443 GTGACGGTAGGGCTGGGG 61.782 72.222 0.00 0.00 0.00 4.96
1796 6184 3.782443 GGGGTGACGGTAGGGCTG 61.782 72.222 0.00 0.00 0.00 4.85
1802 6190 4.403502 GGGGGAGGGGTGACGGTA 62.404 72.222 0.00 0.00 0.00 4.02
1807 6195 3.695825 GAGGAGGGGGAGGGGTGA 61.696 72.222 0.00 0.00 0.00 4.02
1809 6197 3.369388 GAGAGGAGGGGGAGGGGT 61.369 72.222 0.00 0.00 0.00 4.95
1812 6200 1.053264 CATGTGAGAGGAGGGGGAGG 61.053 65.000 0.00 0.00 0.00 4.30
1814 6202 1.690633 GCATGTGAGAGGAGGGGGA 60.691 63.158 0.00 0.00 0.00 4.81
1818 6206 0.818445 GGCATGCATGTGAGAGGAGG 60.818 60.000 26.79 0.00 0.00 4.30
1820 6208 1.153309 CGGCATGCATGTGAGAGGA 60.153 57.895 26.79 0.00 0.00 3.71
1821 6209 1.434622 GACGGCATGCATGTGAGAGG 61.435 60.000 26.79 12.49 0.00 3.69
1822 6210 0.461516 AGACGGCATGCATGTGAGAG 60.462 55.000 26.79 15.68 0.00 3.20
1823 6211 0.036105 AAGACGGCATGCATGTGAGA 60.036 50.000 26.79 0.00 0.00 3.27
1824 6212 0.098200 CAAGACGGCATGCATGTGAG 59.902 55.000 26.79 19.50 0.00 3.51
1825 6213 1.925415 GCAAGACGGCATGCATGTGA 61.925 55.000 26.79 0.00 42.12 3.58
1826 6214 1.515519 GCAAGACGGCATGCATGTG 60.516 57.895 26.79 21.11 42.12 3.21
1827 6215 2.879907 GCAAGACGGCATGCATGT 59.120 55.556 26.79 17.30 42.12 3.21
1828 6216 2.277692 CGCAAGACGGCATGCATG 60.278 61.111 22.70 22.70 42.68 4.06
1829 6217 2.436469 TCGCAAGACGGCATGCAT 60.436 55.556 19.81 6.73 45.01 3.96
1845 6233 1.379527 CCCCTTGCAACGATACCTTC 58.620 55.000 0.00 0.00 0.00 3.46
1846 6234 0.034477 CCCCCTTGCAACGATACCTT 60.034 55.000 0.00 0.00 0.00 3.50
1847 6235 0.912487 TCCCCCTTGCAACGATACCT 60.912 55.000 0.00 0.00 0.00 3.08
1848 6236 0.463833 CTCCCCCTTGCAACGATACC 60.464 60.000 0.00 0.00 0.00 2.73
1849 6237 0.463833 CCTCCCCCTTGCAACGATAC 60.464 60.000 0.00 0.00 0.00 2.24
1850 6238 1.632018 CCCTCCCCCTTGCAACGATA 61.632 60.000 0.00 0.00 0.00 2.92
1851 6239 2.677228 CCTCCCCCTTGCAACGAT 59.323 61.111 0.00 0.00 0.00 3.73
1852 6240 3.646715 CCCTCCCCCTTGCAACGA 61.647 66.667 0.00 0.00 0.00 3.85
1862 6250 4.410400 CAGAACACCGCCCTCCCC 62.410 72.222 0.00 0.00 0.00 4.81
1863 6251 4.410400 CCAGAACACCGCCCTCCC 62.410 72.222 0.00 0.00 0.00 4.30
1865 6253 3.959991 GAGCCAGAACACCGCCCTC 62.960 68.421 0.00 0.00 0.00 4.30
1866 6254 4.021925 GAGCCAGAACACCGCCCT 62.022 66.667 0.00 0.00 0.00 5.19
1867 6255 4.329545 TGAGCCAGAACACCGCCC 62.330 66.667 0.00 0.00 0.00 6.13
1868 6256 3.050275 GTGAGCCAGAACACCGCC 61.050 66.667 0.00 0.00 0.00 6.13
1869 6257 2.280797 TGTGAGCCAGAACACCGC 60.281 61.111 0.00 0.00 36.35 5.68
1870 6258 0.946221 GACTGTGAGCCAGAACACCG 60.946 60.000 0.00 0.00 44.49 4.94
1871 6259 0.603975 GGACTGTGAGCCAGAACACC 60.604 60.000 0.00 0.00 44.49 4.16
1872 6260 0.394565 AGGACTGTGAGCCAGAACAC 59.605 55.000 0.00 0.00 44.49 3.32
1873 6261 0.681733 GAGGACTGTGAGCCAGAACA 59.318 55.000 0.00 0.00 44.49 3.18
1874 6262 0.036858 GGAGGACTGTGAGCCAGAAC 60.037 60.000 0.00 0.00 44.49 3.01
1875 6263 1.194781 GGGAGGACTGTGAGCCAGAA 61.195 60.000 0.00 0.00 44.49 3.02
1876 6264 1.610673 GGGAGGACTGTGAGCCAGA 60.611 63.158 0.00 0.00 44.49 3.86
1878 6266 0.324738 CTAGGGAGGACTGTGAGCCA 60.325 60.000 0.00 0.00 0.00 4.75
1879 6267 0.033011 TCTAGGGAGGACTGTGAGCC 60.033 60.000 0.00 0.00 0.00 4.70
1880 6268 1.398692 CTCTAGGGAGGACTGTGAGC 58.601 60.000 0.00 0.00 36.03 4.26
1890 6278 3.133721 CCTTGAATGACACCTCTAGGGAG 59.866 52.174 0.20 0.00 40.27 4.30
1891 6279 3.107601 CCTTGAATGACACCTCTAGGGA 58.892 50.000 0.20 0.00 40.27 4.20
1892 6280 2.171448 CCCTTGAATGACACCTCTAGGG 59.829 54.545 16.50 16.50 44.67 3.53
1893 6281 3.107601 TCCCTTGAATGACACCTCTAGG 58.892 50.000 8.89 8.89 42.17 3.02
1894 6282 4.383552 CCTTCCCTTGAATGACACCTCTAG 60.384 50.000 0.00 0.00 0.00 2.43
1895 6283 3.519510 CCTTCCCTTGAATGACACCTCTA 59.480 47.826 0.00 0.00 0.00 2.43
1896 6284 2.307098 CCTTCCCTTGAATGACACCTCT 59.693 50.000 0.00 0.00 0.00 3.69
1897 6285 2.619074 CCCTTCCCTTGAATGACACCTC 60.619 54.545 0.00 0.00 0.00 3.85
1898 6286 1.355720 CCCTTCCCTTGAATGACACCT 59.644 52.381 0.00 0.00 0.00 4.00
1899 6287 1.075536 ACCCTTCCCTTGAATGACACC 59.924 52.381 0.00 0.00 0.00 4.16
1900 6288 2.162681 CACCCTTCCCTTGAATGACAC 58.837 52.381 0.00 0.00 0.00 3.67
1901 6289 1.075374 CCACCCTTCCCTTGAATGACA 59.925 52.381 0.00 0.00 0.00 3.58
1902 6290 1.616994 CCCACCCTTCCCTTGAATGAC 60.617 57.143 0.00 0.00 0.00 3.06
1903 6291 0.704076 CCCACCCTTCCCTTGAATGA 59.296 55.000 0.00 0.00 0.00 2.57
1904 6292 0.324645 CCCCACCCTTCCCTTGAATG 60.325 60.000 0.00 0.00 0.00 2.67
1905 6293 1.518431 CCCCCACCCTTCCCTTGAAT 61.518 60.000 0.00 0.00 0.00 2.57
1906 6294 2.167037 CCCCCACCCTTCCCTTGAA 61.167 63.158 0.00 0.00 0.00 2.69
1907 6295 2.534272 CCCCCACCCTTCCCTTGA 60.534 66.667 0.00 0.00 0.00 3.02
1925 6313 2.966309 CTCGCAGCGGGTCCAAAAC 61.966 63.158 16.42 0.00 0.00 2.43
1926 6314 2.668212 CTCGCAGCGGGTCCAAAA 60.668 61.111 16.42 0.00 0.00 2.44
1927 6315 4.697756 CCTCGCAGCGGGTCCAAA 62.698 66.667 15.05 0.00 0.00 3.28
1931 6319 4.681978 AACACCTCGCAGCGGGTC 62.682 66.667 21.08 0.00 36.19 4.46
1932 6320 3.767630 AAAACACCTCGCAGCGGGT 62.768 57.895 15.05 17.35 36.19 5.28
1933 6321 2.978010 AAAACACCTCGCAGCGGG 60.978 61.111 16.42 12.48 36.19 6.13
1934 6322 2.252260 CAAAACACCTCGCAGCGG 59.748 61.111 16.42 5.58 39.06 5.52
1935 6323 1.369209 CACAAAACACCTCGCAGCG 60.369 57.895 9.06 9.06 0.00 5.18
1936 6324 1.008538 CCACAAAACACCTCGCAGC 60.009 57.895 0.00 0.00 0.00 5.25
1937 6325 1.008538 GCCACAAAACACCTCGCAG 60.009 57.895 0.00 0.00 0.00 5.18
1938 6326 2.829206 CGCCACAAAACACCTCGCA 61.829 57.895 0.00 0.00 0.00 5.10
1939 6327 2.051345 CGCCACAAAACACCTCGC 60.051 61.111 0.00 0.00 0.00 5.03
1940 6328 2.051345 GCGCCACAAAACACCTCG 60.051 61.111 0.00 0.00 0.00 4.63
1941 6329 2.335011 GGCGCCACAAAACACCTC 59.665 61.111 24.80 0.00 0.00 3.85
1942 6330 3.591835 CGGCGCCACAAAACACCT 61.592 61.111 28.98 0.00 0.00 4.00
1943 6331 4.639171 CCGGCGCCACAAAACACC 62.639 66.667 28.98 0.00 0.00 4.16
1976 6364 1.154488 CAACATTGCCGACGTTCCG 60.154 57.895 0.00 0.00 0.00 4.30
1977 6365 0.309612 AACAACATTGCCGACGTTCC 59.690 50.000 0.00 0.00 0.00 3.62
1978 6366 1.394697 CAACAACATTGCCGACGTTC 58.605 50.000 0.00 0.00 0.00 3.95
1979 6367 0.030101 CCAACAACATTGCCGACGTT 59.970 50.000 0.00 0.00 0.00 3.99
1980 6368 1.652012 CCAACAACATTGCCGACGT 59.348 52.632 0.00 0.00 0.00 4.34
1981 6369 1.729131 GCCAACAACATTGCCGACG 60.729 57.895 0.00 0.00 0.00 5.12
1982 6370 0.249238 TTGCCAACAACATTGCCGAC 60.249 50.000 0.00 0.00 0.00 4.79
1983 6371 0.031857 CTTGCCAACAACATTGCCGA 59.968 50.000 0.00 0.00 0.00 5.54
1984 6372 0.249405 ACTTGCCAACAACATTGCCG 60.249 50.000 0.00 0.00 0.00 5.69
1985 6373 1.598601 CAACTTGCCAACAACATTGCC 59.401 47.619 0.00 0.00 0.00 4.52
1986 6374 1.598601 CCAACTTGCCAACAACATTGC 59.401 47.619 0.00 0.00 30.44 3.56
1987 6375 2.903798 ACCAACTTGCCAACAACATTG 58.096 42.857 0.00 0.00 31.12 2.82
1988 6376 3.197549 AGAACCAACTTGCCAACAACATT 59.802 39.130 0.00 0.00 0.00 2.71
1989 6377 2.765699 AGAACCAACTTGCCAACAACAT 59.234 40.909 0.00 0.00 0.00 2.71
1990 6378 2.175202 AGAACCAACTTGCCAACAACA 58.825 42.857 0.00 0.00 0.00 3.33
1991 6379 2.959507 AGAACCAACTTGCCAACAAC 57.040 45.000 0.00 0.00 0.00 3.32
1992 6380 3.096092 AGAAGAACCAACTTGCCAACAA 58.904 40.909 0.00 0.00 0.00 2.83
1993 6381 2.733956 AGAAGAACCAACTTGCCAACA 58.266 42.857 0.00 0.00 0.00 3.33
1994 6382 6.569179 TTATAGAAGAACCAACTTGCCAAC 57.431 37.500 0.00 0.00 0.00 3.77
1995 6383 6.945435 TCATTATAGAAGAACCAACTTGCCAA 59.055 34.615 0.00 0.00 0.00 4.52
1996 6384 6.480763 TCATTATAGAAGAACCAACTTGCCA 58.519 36.000 0.00 0.00 0.00 4.92
1997 6385 7.573968 ATCATTATAGAAGAACCAACTTGCC 57.426 36.000 0.00 0.00 0.00 4.52
1998 6386 8.677300 TGAATCATTATAGAAGAACCAACTTGC 58.323 33.333 0.00 0.00 0.00 4.01
2001 6389 9.265901 CGATGAATCATTATAGAAGAACCAACT 57.734 33.333 0.00 0.00 0.00 3.16
2002 6390 8.499162 CCGATGAATCATTATAGAAGAACCAAC 58.501 37.037 0.00 0.00 0.00 3.77
2003 6391 7.173218 GCCGATGAATCATTATAGAAGAACCAA 59.827 37.037 0.00 0.00 0.00 3.67
2004 6392 6.650807 GCCGATGAATCATTATAGAAGAACCA 59.349 38.462 0.00 0.00 0.00 3.67
2005 6393 6.876257 AGCCGATGAATCATTATAGAAGAACC 59.124 38.462 0.00 0.00 0.00 3.62
2006 6394 7.816995 AGAGCCGATGAATCATTATAGAAGAAC 59.183 37.037 0.00 0.00 0.00 3.01
2007 6395 7.901029 AGAGCCGATGAATCATTATAGAAGAA 58.099 34.615 0.00 0.00 0.00 2.52
2008 6396 7.395772 AGAGAGCCGATGAATCATTATAGAAGA 59.604 37.037 0.00 0.00 0.00 2.87
2009 6397 7.488792 CAGAGAGCCGATGAATCATTATAGAAG 59.511 40.741 0.00 0.00 0.00 2.85
2010 6398 7.318893 CAGAGAGCCGATGAATCATTATAGAA 58.681 38.462 0.00 0.00 0.00 2.10
2011 6399 6.626844 GCAGAGAGCCGATGAATCATTATAGA 60.627 42.308 0.00 0.00 37.23 1.98
2012 6400 5.519566 GCAGAGAGCCGATGAATCATTATAG 59.480 44.000 0.00 0.00 37.23 1.31
2013 6401 5.414360 GCAGAGAGCCGATGAATCATTATA 58.586 41.667 0.00 0.00 37.23 0.98
2014 6402 4.252073 GCAGAGAGCCGATGAATCATTAT 58.748 43.478 0.00 0.00 37.23 1.28
2015 6403 3.657634 GCAGAGAGCCGATGAATCATTA 58.342 45.455 0.00 0.00 37.23 1.90
2016 6404 2.492012 GCAGAGAGCCGATGAATCATT 58.508 47.619 0.00 0.00 37.23 2.57
2017 6405 2.166821 GCAGAGAGCCGATGAATCAT 57.833 50.000 0.00 0.00 37.23 2.45
2018 6406 3.675086 GCAGAGAGCCGATGAATCA 57.325 52.632 0.00 0.00 37.23 2.57
2028 6416 2.338785 GGCAAACAGGGCAGAGAGC 61.339 63.158 0.00 0.00 44.65 4.09
2029 6417 0.676151 GAGGCAAACAGGGCAGAGAG 60.676 60.000 0.00 0.00 35.46 3.20
2030 6418 1.130054 AGAGGCAAACAGGGCAGAGA 61.130 55.000 0.00 0.00 35.46 3.10
2031 6419 0.615331 TAGAGGCAAACAGGGCAGAG 59.385 55.000 0.00 0.00 35.46 3.35
2032 6420 0.615331 CTAGAGGCAAACAGGGCAGA 59.385 55.000 0.00 0.00 35.46 4.26
2033 6421 0.615331 TCTAGAGGCAAACAGGGCAG 59.385 55.000 0.00 0.00 35.46 4.85
2034 6422 1.289160 ATCTAGAGGCAAACAGGGCA 58.711 50.000 0.00 0.00 35.46 5.36
2035 6423 2.426842 AATCTAGAGGCAAACAGGGC 57.573 50.000 0.00 0.00 0.00 5.19
2036 6424 4.310769 CGATAATCTAGAGGCAAACAGGG 58.689 47.826 0.00 0.00 0.00 4.45
2037 6425 4.202264 ACCGATAATCTAGAGGCAAACAGG 60.202 45.833 0.00 0.00 0.00 4.00
2038 6426 4.950050 ACCGATAATCTAGAGGCAAACAG 58.050 43.478 0.00 0.00 0.00 3.16
2039 6427 4.499188 CGACCGATAATCTAGAGGCAAACA 60.499 45.833 0.00 0.00 0.00 2.83
2040 6428 3.982058 CGACCGATAATCTAGAGGCAAAC 59.018 47.826 0.00 0.00 0.00 2.93
2041 6429 3.887110 TCGACCGATAATCTAGAGGCAAA 59.113 43.478 0.00 0.00 0.00 3.68
2042 6430 3.483421 TCGACCGATAATCTAGAGGCAA 58.517 45.455 0.00 0.00 0.00 4.52
2043 6431 3.136009 TCGACCGATAATCTAGAGGCA 57.864 47.619 0.00 0.00 0.00 4.75
2044 6432 3.181495 CCATCGACCGATAATCTAGAGGC 60.181 52.174 4.48 0.00 32.93 4.70
2045 6433 4.095185 GTCCATCGACCGATAATCTAGAGG 59.905 50.000 4.48 0.00 32.93 3.69
2046 6434 4.201734 CGTCCATCGACCGATAATCTAGAG 60.202 50.000 4.48 0.00 42.86 2.43
2047 6435 3.683340 CGTCCATCGACCGATAATCTAGA 59.317 47.826 4.48 0.00 42.86 2.43
2048 6436 3.181509 CCGTCCATCGACCGATAATCTAG 60.182 52.174 4.48 0.00 42.86 2.43
2049 6437 2.745821 CCGTCCATCGACCGATAATCTA 59.254 50.000 4.48 0.00 42.86 1.98
2050 6438 1.540267 CCGTCCATCGACCGATAATCT 59.460 52.381 4.48 0.00 42.86 2.40
2051 6439 1.268899 ACCGTCCATCGACCGATAATC 59.731 52.381 4.48 0.00 42.86 1.75
2052 6440 1.325355 ACCGTCCATCGACCGATAAT 58.675 50.000 4.48 0.00 42.86 1.28
2053 6441 1.105457 AACCGTCCATCGACCGATAA 58.895 50.000 4.48 0.00 42.86 1.75
2054 6442 1.066002 GAAACCGTCCATCGACCGATA 59.934 52.381 4.48 0.00 42.86 2.92
2055 6443 0.179119 GAAACCGTCCATCGACCGAT 60.179 55.000 0.00 0.00 42.86 4.18
2056 6444 1.213537 GAAACCGTCCATCGACCGA 59.786 57.895 0.00 0.00 42.86 4.69
2057 6445 1.808390 GGAAACCGTCCATCGACCG 60.808 63.158 0.00 0.00 46.97 4.79
2058 6446 4.196965 GGAAACCGTCCATCGACC 57.803 61.111 0.00 0.00 46.97 4.79
2069 6457 4.243383 GCACAACATGCGGAAACC 57.757 55.556 0.00 0.00 46.55 3.27
2077 6465 1.700523 CCAAATCGTGGCACAACATG 58.299 50.000 19.09 10.55 44.16 3.21
2087 6475 1.817941 CCCCTACGCCCAAATCGTG 60.818 63.158 0.00 0.00 40.69 4.35
2088 6476 1.991167 TCCCCTACGCCCAAATCGT 60.991 57.895 0.00 0.00 43.20 3.73
2089 6477 1.523032 GTCCCCTACGCCCAAATCG 60.523 63.158 0.00 0.00 0.00 3.34
2090 6478 0.182775 ATGTCCCCTACGCCCAAATC 59.817 55.000 0.00 0.00 0.00 2.17
2091 6479 0.182775 GATGTCCCCTACGCCCAAAT 59.817 55.000 0.00 0.00 0.00 2.32
2092 6480 0.912487 AGATGTCCCCTACGCCCAAA 60.912 55.000 0.00 0.00 0.00 3.28
2093 6481 1.306654 AGATGTCCCCTACGCCCAA 60.307 57.895 0.00 0.00 0.00 4.12
2094 6482 2.063979 CAGATGTCCCCTACGCCCA 61.064 63.158 0.00 0.00 0.00 5.36
2095 6483 2.808206 CCAGATGTCCCCTACGCCC 61.808 68.421 0.00 0.00 0.00 6.13
2096 6484 1.122019 ATCCAGATGTCCCCTACGCC 61.122 60.000 0.00 0.00 0.00 5.68
2097 6485 0.318762 GATCCAGATGTCCCCTACGC 59.681 60.000 0.00 0.00 0.00 4.42
2098 6486 1.889829 GAGATCCAGATGTCCCCTACG 59.110 57.143 0.00 0.00 0.00 3.51
2099 6487 2.252714 GGAGATCCAGATGTCCCCTAC 58.747 57.143 11.84 0.00 43.36 3.18
2100 6488 2.704190 GGAGATCCAGATGTCCCCTA 57.296 55.000 11.84 0.00 43.36 3.53
2101 6489 3.567902 GGAGATCCAGATGTCCCCT 57.432 57.895 11.84 0.00 43.36 4.79
2105 6493 1.342819 CGAAGGGGAGATCCAGATGTC 59.657 57.143 0.47 0.00 37.91 3.06
2106 6494 1.062886 TCGAAGGGGAGATCCAGATGT 60.063 52.381 0.47 0.00 37.91 3.06
2107 6495 1.342819 GTCGAAGGGGAGATCCAGATG 59.657 57.143 0.47 0.00 37.91 2.90
2108 6496 1.062886 TGTCGAAGGGGAGATCCAGAT 60.063 52.381 0.47 0.00 37.91 2.90
2109 6497 0.335019 TGTCGAAGGGGAGATCCAGA 59.665 55.000 0.47 0.00 37.91 3.86
2110 6498 1.418334 ATGTCGAAGGGGAGATCCAG 58.582 55.000 0.47 0.00 37.91 3.86
2111 6499 1.486310 CAATGTCGAAGGGGAGATCCA 59.514 52.381 0.47 0.00 37.91 3.41
2112 6500 1.202698 CCAATGTCGAAGGGGAGATCC 60.203 57.143 0.00 0.00 0.00 3.36
2113 6501 1.811941 GCCAATGTCGAAGGGGAGATC 60.812 57.143 0.00 0.00 0.00 2.75
2114 6502 0.181350 GCCAATGTCGAAGGGGAGAT 59.819 55.000 0.00 0.00 0.00 2.75
2115 6503 1.602237 GCCAATGTCGAAGGGGAGA 59.398 57.895 0.00 0.00 0.00 3.71
2116 6504 1.452108 GGCCAATGTCGAAGGGGAG 60.452 63.158 0.00 0.00 0.00 4.30
2117 6505 2.674754 GGCCAATGTCGAAGGGGA 59.325 61.111 0.00 0.00 0.00 4.81
2118 6506 2.440247 GGGCCAATGTCGAAGGGG 60.440 66.667 4.39 0.00 0.00 4.79
2119 6507 2.824041 CGGGCCAATGTCGAAGGG 60.824 66.667 4.39 0.00 0.00 3.95
2120 6508 1.815421 CTCGGGCCAATGTCGAAGG 60.815 63.158 4.39 0.00 32.35 3.46
2121 6509 1.079127 ACTCGGGCCAATGTCGAAG 60.079 57.895 4.39 0.98 32.35 3.79
2122 6510 1.079405 GACTCGGGCCAATGTCGAA 60.079 57.895 4.39 0.00 32.35 3.71
2123 6511 2.577059 GACTCGGGCCAATGTCGA 59.423 61.111 4.39 2.40 0.00 4.20
2124 6512 2.885644 CGACTCGGGCCAATGTCG 60.886 66.667 22.41 22.41 44.41 4.35
2125 6513 1.144057 ATCGACTCGGGCCAATGTC 59.856 57.895 4.39 8.14 0.00 3.06
2126 6514 1.153369 CATCGACTCGGGCCAATGT 60.153 57.895 4.39 0.00 0.00 2.71
2127 6515 1.889105 CCATCGACTCGGGCCAATG 60.889 63.158 4.39 0.00 0.00 2.82
2128 6516 2.505982 CCATCGACTCGGGCCAAT 59.494 61.111 4.39 0.00 0.00 3.16
2129 6517 3.781307 CCCATCGACTCGGGCCAA 61.781 66.667 4.39 0.00 35.09 4.52
2133 6521 2.029666 GATGCCCATCGACTCGGG 59.970 66.667 11.29 11.29 46.15 5.14
2134 6522 1.300465 CAGATGCCCATCGACTCGG 60.300 63.158 0.00 0.00 42.48 4.63
2135 6523 0.103026 TTCAGATGCCCATCGACTCG 59.897 55.000 2.85 0.00 42.48 4.18
2136 6524 2.411904 GATTCAGATGCCCATCGACTC 58.588 52.381 2.85 4.46 42.48 3.36
2137 6525 1.269988 CGATTCAGATGCCCATCGACT 60.270 52.381 2.85 0.00 40.83 4.18
2138 6526 1.143305 CGATTCAGATGCCCATCGAC 58.857 55.000 2.85 0.00 40.83 4.20
2139 6527 1.039856 TCGATTCAGATGCCCATCGA 58.960 50.000 0.81 0.81 43.93 3.59
2140 6528 1.143305 GTCGATTCAGATGCCCATCG 58.857 55.000 2.85 0.00 42.48 3.84
2141 6529 1.143305 CGTCGATTCAGATGCCCATC 58.857 55.000 0.00 0.00 38.09 3.51
2142 6530 0.465705 ACGTCGATTCAGATGCCCAT 59.534 50.000 0.00 0.00 0.00 4.00
2143 6531 0.249120 AACGTCGATTCAGATGCCCA 59.751 50.000 0.00 0.00 0.00 5.36
2144 6532 1.369625 AAACGTCGATTCAGATGCCC 58.630 50.000 0.00 0.00 0.00 5.36
2145 6533 2.673368 AGAAAACGTCGATTCAGATGCC 59.327 45.455 14.63 0.00 0.00 4.40
2146 6534 3.242123 GGAGAAAACGTCGATTCAGATGC 60.242 47.826 14.63 0.00 0.00 3.91
2147 6535 3.926527 TGGAGAAAACGTCGATTCAGATG 59.073 43.478 14.63 0.00 0.00 2.90
2148 6536 4.188247 TGGAGAAAACGTCGATTCAGAT 57.812 40.909 14.63 0.00 0.00 2.90
2149 6537 3.653539 TGGAGAAAACGTCGATTCAGA 57.346 42.857 14.63 0.39 0.00 3.27
2150 6538 3.484229 GCATGGAGAAAACGTCGATTCAG 60.484 47.826 14.63 0.00 0.00 3.02
2151 6539 2.415168 GCATGGAGAAAACGTCGATTCA 59.585 45.455 14.63 0.00 0.00 2.57
2152 6540 2.534939 CGCATGGAGAAAACGTCGATTC 60.535 50.000 0.00 3.31 0.00 2.52
2153 6541 1.393539 CGCATGGAGAAAACGTCGATT 59.606 47.619 0.00 0.00 0.00 3.34
2154 6542 0.999406 CGCATGGAGAAAACGTCGAT 59.001 50.000 0.00 0.00 0.00 3.59
2155 6543 1.011968 CCGCATGGAGAAAACGTCGA 61.012 55.000 0.00 0.00 37.49 4.20
2156 6544 1.289109 ACCGCATGGAGAAAACGTCG 61.289 55.000 0.00 0.00 39.21 5.12
2157 6545 0.442699 GACCGCATGGAGAAAACGTC 59.557 55.000 0.00 0.00 39.21 4.34
2158 6546 0.953960 GGACCGCATGGAGAAAACGT 60.954 55.000 0.00 0.00 39.21 3.99
2159 6547 0.953471 TGGACCGCATGGAGAAAACG 60.953 55.000 0.00 0.00 39.21 3.60
2160 6548 0.804989 CTGGACCGCATGGAGAAAAC 59.195 55.000 0.00 0.00 39.21 2.43
2161 6549 0.690192 TCTGGACCGCATGGAGAAAA 59.310 50.000 0.00 0.00 39.21 2.29
2162 6550 0.911769 ATCTGGACCGCATGGAGAAA 59.088 50.000 0.00 0.00 39.21 2.52
2163 6551 0.465705 GATCTGGACCGCATGGAGAA 59.534 55.000 0.00 0.00 39.21 2.87
2164 6552 1.402896 GGATCTGGACCGCATGGAGA 61.403 60.000 0.00 0.00 39.21 3.71
2165 6553 1.070445 GGATCTGGACCGCATGGAG 59.930 63.158 0.00 0.00 39.21 3.86
2166 6554 1.383109 AGGATCTGGACCGCATGGA 60.383 57.895 0.00 0.00 39.21 3.41
2167 6555 1.070445 GAGGATCTGGACCGCATGG 59.930 63.158 0.00 0.00 42.84 3.66
2168 6556 4.766970 GAGGATCTGGACCGCATG 57.233 61.111 0.00 0.00 0.00 4.06
2179 6567 2.303175 ACCAAGCTAGACGAGAGGATC 58.697 52.381 0.00 0.00 0.00 3.36
2180 6568 2.428890 CAACCAAGCTAGACGAGAGGAT 59.571 50.000 0.00 0.00 0.00 3.24
2181 6569 1.819288 CAACCAAGCTAGACGAGAGGA 59.181 52.381 0.00 0.00 0.00 3.71
2182 6570 1.546476 ACAACCAAGCTAGACGAGAGG 59.454 52.381 0.00 0.00 0.00 3.69
2183 6571 3.305398 AACAACCAAGCTAGACGAGAG 57.695 47.619 0.00 0.00 0.00 3.20
2184 6572 3.746045 AAACAACCAAGCTAGACGAGA 57.254 42.857 0.00 0.00 0.00 4.04
2185 6573 4.511826 AGAAAAACAACCAAGCTAGACGAG 59.488 41.667 0.00 0.00 0.00 4.18
2186 6574 4.448210 AGAAAAACAACCAAGCTAGACGA 58.552 39.130 0.00 0.00 0.00 4.20
2187 6575 4.813296 AGAAAAACAACCAAGCTAGACG 57.187 40.909 0.00 0.00 0.00 4.18
2188 6576 5.333875 CGGTAGAAAAACAACCAAGCTAGAC 60.334 44.000 0.00 0.00 32.55 2.59
2189 6577 4.753107 CGGTAGAAAAACAACCAAGCTAGA 59.247 41.667 0.00 0.00 32.55 2.43
2190 6578 4.083484 CCGGTAGAAAAACAACCAAGCTAG 60.083 45.833 0.00 0.00 32.55 3.42
2191 6579 3.816523 CCGGTAGAAAAACAACCAAGCTA 59.183 43.478 0.00 0.00 32.55 3.32
2192 6580 2.621526 CCGGTAGAAAAACAACCAAGCT 59.378 45.455 0.00 0.00 32.55 3.74
2193 6581 2.619646 TCCGGTAGAAAAACAACCAAGC 59.380 45.455 0.00 0.00 32.55 4.01
2194 6582 4.277423 ACATCCGGTAGAAAAACAACCAAG 59.723 41.667 0.00 0.00 32.55 3.61
2195 6583 4.208746 ACATCCGGTAGAAAAACAACCAA 58.791 39.130 0.00 0.00 32.55 3.67
2196 6584 3.822940 ACATCCGGTAGAAAAACAACCA 58.177 40.909 0.00 0.00 32.55 3.67
2197 6585 4.037089 ACAACATCCGGTAGAAAAACAACC 59.963 41.667 0.00 0.00 0.00 3.77
2198 6586 5.177725 ACAACATCCGGTAGAAAAACAAC 57.822 39.130 0.00 0.00 0.00 3.32
2199 6587 5.583495 CAACAACATCCGGTAGAAAAACAA 58.417 37.500 0.00 0.00 0.00 2.83
2200 6588 4.498345 GCAACAACATCCGGTAGAAAAACA 60.498 41.667 0.00 0.00 0.00 2.83
2201 6589 3.978855 GCAACAACATCCGGTAGAAAAAC 59.021 43.478 0.00 0.00 0.00 2.43
2202 6590 3.886505 AGCAACAACATCCGGTAGAAAAA 59.113 39.130 0.00 0.00 0.00 1.94
2203 6591 3.482436 AGCAACAACATCCGGTAGAAAA 58.518 40.909 0.00 0.00 0.00 2.29
2204 6592 3.071479 GAGCAACAACATCCGGTAGAAA 58.929 45.455 0.00 0.00 0.00 2.52
2205 6593 2.301870 AGAGCAACAACATCCGGTAGAA 59.698 45.455 0.00 0.00 0.00 2.10
2206 6594 1.899814 AGAGCAACAACATCCGGTAGA 59.100 47.619 0.00 0.00 0.00 2.59
2207 6595 2.002586 CAGAGCAACAACATCCGGTAG 58.997 52.381 0.00 0.00 0.00 3.18
2208 6596 1.346395 ACAGAGCAACAACATCCGGTA 59.654 47.619 0.00 0.00 0.00 4.02
2209 6597 0.108585 ACAGAGCAACAACATCCGGT 59.891 50.000 0.00 0.00 0.00 5.28
2210 6598 1.069022 CAACAGAGCAACAACATCCGG 60.069 52.381 0.00 0.00 0.00 5.14
2211 6599 1.603802 ACAACAGAGCAACAACATCCG 59.396 47.619 0.00 0.00 0.00 4.18
2212 6600 3.715628 AACAACAGAGCAACAACATCC 57.284 42.857 0.00 0.00 0.00 3.51
2213 6601 4.671377 TCAAACAACAGAGCAACAACATC 58.329 39.130 0.00 0.00 0.00 3.06
2214 6602 4.158394 ACTCAAACAACAGAGCAACAACAT 59.842 37.500 0.00 0.00 35.28 2.71
2215 6603 3.505680 ACTCAAACAACAGAGCAACAACA 59.494 39.130 0.00 0.00 35.28 3.33
2216 6604 4.096732 ACTCAAACAACAGAGCAACAAC 57.903 40.909 0.00 0.00 35.28 3.32
2217 6605 4.782019 AACTCAAACAACAGAGCAACAA 57.218 36.364 0.00 0.00 35.28 2.83
2218 6606 4.484236 CAAACTCAAACAACAGAGCAACA 58.516 39.130 0.00 0.00 35.28 3.33
2219 6607 3.304293 GCAAACTCAAACAACAGAGCAAC 59.696 43.478 0.00 0.00 35.28 4.17
2220 6608 3.056962 TGCAAACTCAAACAACAGAGCAA 60.057 39.130 0.00 0.00 35.28 3.91
2221 6609 2.491298 TGCAAACTCAAACAACAGAGCA 59.509 40.909 0.00 0.00 35.28 4.26
2222 6610 3.149436 TGCAAACTCAAACAACAGAGC 57.851 42.857 0.00 0.00 35.28 4.09
2223 6611 4.923893 TGATGCAAACTCAAACAACAGAG 58.076 39.130 0.00 0.00 37.87 3.35
2224 6612 4.202040 CCTGATGCAAACTCAAACAACAGA 60.202 41.667 0.00 0.00 35.61 3.41
2225 6613 4.046462 CCTGATGCAAACTCAAACAACAG 58.954 43.478 0.00 0.00 33.98 3.16
2226 6614 3.737663 GCCTGATGCAAACTCAAACAACA 60.738 43.478 0.00 0.00 40.77 3.33
2227 6615 2.796593 GCCTGATGCAAACTCAAACAAC 59.203 45.455 0.00 0.00 40.77 3.32
2228 6616 2.224018 GGCCTGATGCAAACTCAAACAA 60.224 45.455 0.00 0.00 43.89 2.83
2229 6617 1.340889 GGCCTGATGCAAACTCAAACA 59.659 47.619 0.00 0.00 43.89 2.83
2230 6618 1.337167 GGGCCTGATGCAAACTCAAAC 60.337 52.381 0.84 0.00 43.89 2.93
2231 6619 0.968405 GGGCCTGATGCAAACTCAAA 59.032 50.000 0.84 0.00 43.89 2.69
2232 6620 0.112995 AGGGCCTGATGCAAACTCAA 59.887 50.000 4.50 0.00 43.89 3.02
2233 6621 0.322816 GAGGGCCTGATGCAAACTCA 60.323 55.000 12.95 0.00 43.89 3.41
2234 6622 1.034292 GGAGGGCCTGATGCAAACTC 61.034 60.000 12.95 0.00 43.89 3.01
2235 6623 1.000396 GGAGGGCCTGATGCAAACT 60.000 57.895 12.95 0.00 43.89 2.66
2236 6624 1.304381 TGGAGGGCCTGATGCAAAC 60.304 57.895 12.95 0.00 43.89 2.93
2237 6625 1.000521 CTGGAGGGCCTGATGCAAA 60.001 57.895 12.95 0.00 43.89 3.68
2238 6626 2.679092 CTGGAGGGCCTGATGCAA 59.321 61.111 12.95 0.00 43.89 4.08
2239 6627 4.119363 GCTGGAGGGCCTGATGCA 62.119 66.667 12.95 0.00 43.89 3.96
2241 6629 4.559063 CCGCTGGAGGGCCTGATG 62.559 72.222 12.95 0.55 35.28 3.07
2244 6632 4.351054 AAACCGCTGGAGGGCCTG 62.351 66.667 12.95 0.00 36.29 4.85
2245 6633 4.351054 CAAACCGCTGGAGGGCCT 62.351 66.667 5.25 5.25 35.02 5.19
2246 6634 3.645268 ATCAAACCGCTGGAGGGCC 62.645 63.158 0.00 0.00 35.02 5.80
2247 6635 1.657751 GAATCAAACCGCTGGAGGGC 61.658 60.000 1.50 0.00 35.02 5.19
2248 6636 0.322456 TGAATCAAACCGCTGGAGGG 60.322 55.000 1.50 0.00 35.02 4.30
2249 6637 1.089920 CTGAATCAAACCGCTGGAGG 58.910 55.000 1.50 0.00 37.30 4.30
2250 6638 1.089920 CCTGAATCAAACCGCTGGAG 58.910 55.000 1.50 0.00 0.00 3.86
2251 6639 0.400213 ACCTGAATCAAACCGCTGGA 59.600 50.000 1.50 0.00 0.00 3.86
2252 6640 1.247567 AACCTGAATCAAACCGCTGG 58.752 50.000 0.00 0.00 0.00 4.85
2253 6641 2.665519 CGAAACCTGAATCAAACCGCTG 60.666 50.000 0.00 0.00 0.00 5.18
2254 6642 1.535462 CGAAACCTGAATCAAACCGCT 59.465 47.619 0.00 0.00 0.00 5.52
2255 6643 1.265905 ACGAAACCTGAATCAAACCGC 59.734 47.619 0.00 0.00 0.00 5.68
2256 6644 3.242936 ACAACGAAACCTGAATCAAACCG 60.243 43.478 0.00 0.00 0.00 4.44
2257 6645 4.041723 CACAACGAAACCTGAATCAAACC 58.958 43.478 0.00 0.00 0.00 3.27
2258 6646 4.041723 CCACAACGAAACCTGAATCAAAC 58.958 43.478 0.00 0.00 0.00 2.93
2259 6647 3.697045 ACCACAACGAAACCTGAATCAAA 59.303 39.130 0.00 0.00 0.00 2.69
2260 6648 3.066064 CACCACAACGAAACCTGAATCAA 59.934 43.478 0.00 0.00 0.00 2.57
2261 6649 2.616376 CACCACAACGAAACCTGAATCA 59.384 45.455 0.00 0.00 0.00 2.57
2262 6650 2.031157 CCACCACAACGAAACCTGAATC 60.031 50.000 0.00 0.00 0.00 2.52
2263 6651 1.953686 CCACCACAACGAAACCTGAAT 59.046 47.619 0.00 0.00 0.00 2.57
2264 6652 1.340211 ACCACCACAACGAAACCTGAA 60.340 47.619 0.00 0.00 0.00 3.02
2265 6653 0.253610 ACCACCACAACGAAACCTGA 59.746 50.000 0.00 0.00 0.00 3.86
2266 6654 0.661020 GACCACCACAACGAAACCTG 59.339 55.000 0.00 0.00 0.00 4.00
2267 6655 0.464916 GGACCACCACAACGAAACCT 60.465 55.000 0.00 0.00 35.97 3.50
2268 6656 1.449726 GGGACCACCACAACGAAACC 61.450 60.000 0.00 0.00 39.85 3.27
2269 6657 0.464916 AGGGACCACCACAACGAAAC 60.465 55.000 0.00 0.00 43.89 2.78
2270 6658 0.256464 AAGGGACCACCACAACGAAA 59.744 50.000 0.00 0.00 43.89 3.46
2271 6659 0.179040 GAAGGGACCACCACAACGAA 60.179 55.000 0.00 0.00 43.89 3.85
2272 6660 1.052124 AGAAGGGACCACCACAACGA 61.052 55.000 0.00 0.00 43.89 3.85
2273 6661 0.682852 TAGAAGGGACCACCACAACG 59.317 55.000 0.00 0.00 43.89 4.10
2274 6662 2.943036 TTAGAAGGGACCACCACAAC 57.057 50.000 0.00 0.00 43.89 3.32
2275 6663 3.139397 ACAATTAGAAGGGACCACCACAA 59.861 43.478 0.00 0.00 43.89 3.33
2276 6664 2.714250 ACAATTAGAAGGGACCACCACA 59.286 45.455 0.00 0.00 43.89 4.17
2277 6665 3.434940 ACAATTAGAAGGGACCACCAC 57.565 47.619 0.00 0.00 43.89 4.16
2278 6666 3.761897 CAACAATTAGAAGGGACCACCA 58.238 45.455 0.00 0.00 43.89 4.17
2279 6667 2.492088 GCAACAATTAGAAGGGACCACC 59.508 50.000 0.00 0.00 40.67 4.61
2280 6668 3.421844 AGCAACAATTAGAAGGGACCAC 58.578 45.455 0.00 0.00 0.00 4.16
2281 6669 3.806949 AGCAACAATTAGAAGGGACCA 57.193 42.857 0.00 0.00 0.00 4.02
2282 6670 4.809673 CAAAGCAACAATTAGAAGGGACC 58.190 43.478 0.00 0.00 0.00 4.46
2283 6671 4.021981 AGCAAAGCAACAATTAGAAGGGAC 60.022 41.667 0.00 0.00 0.00 4.46
2284 6672 4.151883 AGCAAAGCAACAATTAGAAGGGA 58.848 39.130 0.00 0.00 0.00 4.20
2285 6673 4.525912 AGCAAAGCAACAATTAGAAGGG 57.474 40.909 0.00 0.00 0.00 3.95
2286 6674 5.754890 ACAAAGCAAAGCAACAATTAGAAGG 59.245 36.000 0.00 0.00 0.00 3.46
2287 6675 6.833342 ACAAAGCAAAGCAACAATTAGAAG 57.167 33.333 0.00 0.00 0.00 2.85
2288 6676 7.488322 ACTACAAAGCAAAGCAACAATTAGAA 58.512 30.769 0.00 0.00 0.00 2.10
2289 6677 7.038154 ACTACAAAGCAAAGCAACAATTAGA 57.962 32.000 0.00 0.00 0.00 2.10
2290 6678 7.649306 AGAACTACAAAGCAAAGCAACAATTAG 59.351 33.333 0.00 0.00 0.00 1.73
2291 6679 7.488322 AGAACTACAAAGCAAAGCAACAATTA 58.512 30.769 0.00 0.00 0.00 1.40
2292 6680 6.340522 AGAACTACAAAGCAAAGCAACAATT 58.659 32.000 0.00 0.00 0.00 2.32
2293 6681 5.906073 AGAACTACAAAGCAAAGCAACAAT 58.094 33.333 0.00 0.00 0.00 2.71
2294 6682 5.323371 AGAACTACAAAGCAAAGCAACAA 57.677 34.783 0.00 0.00 0.00 2.83
2295 6683 4.981806 AGAACTACAAAGCAAAGCAACA 57.018 36.364 0.00 0.00 0.00 3.33
2296 6684 5.339990 TGAAGAACTACAAAGCAAAGCAAC 58.660 37.500 0.00 0.00 0.00 4.17
2297 6685 5.574891 TGAAGAACTACAAAGCAAAGCAA 57.425 34.783 0.00 0.00 0.00 3.91
2298 6686 5.560760 CGATGAAGAACTACAAAGCAAAGCA 60.561 40.000 0.00 0.00 0.00 3.91
2299 6687 4.848299 CGATGAAGAACTACAAAGCAAAGC 59.152 41.667 0.00 0.00 0.00 3.51
2300 6688 5.848036 CACGATGAAGAACTACAAAGCAAAG 59.152 40.000 0.00 0.00 0.00 2.77
2301 6689 5.525745 TCACGATGAAGAACTACAAAGCAAA 59.474 36.000 0.00 0.00 0.00 3.68
2302 6690 5.053811 TCACGATGAAGAACTACAAAGCAA 58.946 37.500 0.00 0.00 0.00 3.91
2303 6691 4.627058 TCACGATGAAGAACTACAAAGCA 58.373 39.130 0.00 0.00 0.00 3.91
2304 6692 4.434857 GCTCACGATGAAGAACTACAAAGC 60.435 45.833 0.00 0.00 0.00 3.51
2305 6693 4.201532 CGCTCACGATGAAGAACTACAAAG 60.202 45.833 0.00 0.00 43.93 2.77
2306 6694 3.673338 CGCTCACGATGAAGAACTACAAA 59.327 43.478 0.00 0.00 43.93 2.83
2307 6695 3.057806 TCGCTCACGATGAAGAACTACAA 60.058 43.478 0.00 0.00 45.12 2.41
2308 6696 2.486592 TCGCTCACGATGAAGAACTACA 59.513 45.455 0.00 0.00 45.12 2.74
2309 6697 3.132629 TCGCTCACGATGAAGAACTAC 57.867 47.619 0.00 0.00 45.12 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.